Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:47:01 (11886): wrapper (7.7.26015): starting
16:47:01 (11886): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 16:47:01] Arguments: --nthreads 8
[2025-10-12 16:47:01] Threads: 8
[2025-10-12 16:47:01] Checking for CVMFS
[2025-10-12 16:47:01] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 16:47:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 16:47:02] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 16:47:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 16:47:03] 2.11.2.0 17186 220713 141208 151623 1 64 20359725 25165825 4724 130560 0 122534111 99.893 62938024 3164 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-10-12 16:47:03] CVMFS is ok
[2025-10-12 16:47:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 16:47:03] Checking for apptainer binary...
[2025-10-12 16:47:03] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 16:47:03] Running /usr/bin/apptainer --version
[2025-10-12 16:47:03] apptainer version 1.3.2-1.el7
[2025-10-12 16:47:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 16:47:30] cg-vwn311.simple-grid.lan
[2025-10-12 16:47:30] apptainer works
[2025-10-12 16:47:30] Set ATHENA_PROC_NUMBER=8
[2025-10-12 16:47:30] Set ATHENA_CORE_NUMBER=8
[2025-10-12 16:47:30] Starting ATLAS job with PandaID=6839866808
[2025-10-12 16:47:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/10 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 21:05:57]  *** The last 200 lines of the pilot log: ***
[2025-10-12 21:05:57] 2025-10-12 19:05:03,269 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 21:05:57] 2025-10-12 19:05:03,269 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 21:05:57] 2025-10-12 19:05:03,274 | INFO     | fitting pss+swap vs Time
[2025-10-12 21:05:57] 2025-10-12 19:05:03,275 | INFO     | sum of square deviations: 4286517580.0
[2025-10-12 21:05:57] 2025-10-12 19:05:03,280 | INFO     | sum of deviations: 119273399643.5
[2025-10-12 21:05:57] 2025-10-12 19:05:03,280 | INFO     | mean x: 1760288470.5
[2025-10-12 21:05:57] 2025-10-12 19:05:03,281 | INFO     | mean y: 2408620.9625
[2025-10-12 21:05:57] 2025-10-12 19:05:03,281 | INFO     | -- intersect: -48978048431.0279
[2025-10-12 21:05:57] 2025-10-12 19:05:03,281 | INFO     | intersect: -48978048431.0279
[2025-10-12 21:05:57] 2025-10-12 19:05:03,281 | INFO     | chi2: 6.750421219596003
[2025-10-12 21:05:57] 2025-10-12 19:05:03,282 | INFO     | sum of square deviations: 4024149870.0
[2025-10-12 21:05:57] 2025-10-12 19:05:03,284 | INFO     | sum of deviations: 132278195061.0
[2025-10-12 21:05:57] 2025-10-12 19:05:03,284 | INFO     | mean x: 1760288318.0
[2025-10-12 21:05:57] 2025-10-12 19:05:03,284 | INFO     | mean y: 2416024.1276595746
[2025-10-12 21:05:57] 2025-10-12 19:05:03,284 | INFO     | -- intersect: -57860180801.07548
[2025-10-12 21:05:57] 2025-10-12 19:05:03,284 | INFO     | intersect: -57860180801.07548
[2025-10-12 21:05:57] 2025-10-12 19:05:03,285 | INFO     | chi2: 6.024108931243535
[2025-10-12 21:05:57] 2025-10-12 19:05:03,285 | INFO     | current chi2=6.024108931243535 (change=10.759510624967138 %)
[2025-10-12 21:05:57] 2025-10-12 19:05:03,285 | INFO     | right removable region: 234
[2025-10-12 21:05:57] 2025-10-12 19:05:03,285 | INFO     | sum of square deviations: 4024149870.0
[2025-10-12 21:05:57] 2025-10-12 19:05:03,290 | INFO     | sum of deviations: 37927623459.0
[2025-10-12 21:05:57] 2025-10-12 19:05:03,291 | INFO     | mean x: 1760288623.0
[2025-10-12 21:05:57] 2025-10-12 19:05:03,291 | INFO     | mean y: 2455866.459574468
[2025-10-12 21:05:57] 2025-10-12 19:05:03,291 | INFO     | -- intersect: -16588269188.297298
[2025-10-12 21:05:57] 2025-10-12 19:05:03,291 | INFO     | intersect: -16588269188.297298
[2025-10-12 21:05:57] 2025-10-12 19:05:03,291 | INFO     | chi2: 2.085887738335775
[2025-10-12 21:05:57] 2025-10-12 19:05:03,292 | INFO     | current chi2=2.085887738335775 (change=69.0998876887773 %)
[2025-10-12 21:05:57] 2025-10-12 19:05:03,292 | INFO     | sum of square deviations: 3772712597.5
[2025-10-12 21:05:57] 2025-10-12 19:05:03,294 | INFO     | sum of deviations: -749015645.0000019
[2025-10-12 21:05:57] 2025-10-12 19:05:03,294 | INFO     | mean x: 1760288775.5
[2025-10-12 21:05:57] 2025-10-12 19:05:03,294 | INFO     | mean y: 2479168.0173913045
[2025-10-12 21:05:57] 2025-10-12 19:05:03,294 | INFO     | -- intersect: 351958169.794811
[2025-10-12 21:05:57] 2025-10-12 19:05:03,294 | INFO     | intersect: 351958169.794811
[2025-10-12 21:05:57] 2025-10-12 19:05:03,295 | INFO     | chi2: 0.8173706144550341
[2025-10-12 21:05:57] 2025-10-12 19:05:03,295 | INFO     | current chi2=0.8173706144550341 (change=60.814256710326454 %)
[2025-10-12 21:05:57] 2025-10-12 19:05:03,295 | INFO     | sum of square deviations: 3531973200.0
[2025-10-12 21:05:57] 2025-10-12 19:05:03,297 | INFO     | sum of deviations: -4925920922.0
[2025-10-12 21:05:57] 2025-10-12 19:05:03,297 | INFO     | mean x: 1760288928.0
[2025-10-12 21:05:57] 2025-10-12 19:05:03,297 | INFO     | mean y: 2481823.328888889
[2025-10-12 21:05:57] 2025-10-12 19:05:03,298 | INFO     | -- intersect: 2457495938.158569
[2025-10-12 21:05:57] 2025-10-12 19:05:03,298 | INFO     | intersect: 2457495938.158569
[2025-10-12 21:05:57] 2025-10-12 19:05:03,298 | INFO     | chi2: 0.7952161265246881
[2025-10-12 21:05:57] 2025-10-12 19:05:03,298 | INFO     | current chi2=0.7952161265246881 (change=2.710458088234197 %)
[2025-10-12 21:05:57] 2025-10-12 19:05:03,298 | INFO     | left removable region: 30
[2025-10-12 21:05:57] 2025-10-12 19:05:03,299 | INFO     | sum of square deviations: 2632440055.0
[2025-10-12 21:05:57] 2025-10-12 19:05:03,302 | INFO     | sum of deviations: 5878303033.5
[2025-10-12 21:05:57] 2025-10-12 19:05:03,303 | INFO     | mean x: 1760289202.5
[2025-10-12 21:05:57] 2025-10-12 19:05:03,303 | INFO     | mean y: 2494146.25
[2025-10-12 21:05:57] 2025-10-12 19:05:03,303 | INFO     | -- intersect: -3928274700.409662
[2025-10-12 21:05:57] 2025-10-12 19:05:03,303 | INFO     | intersect: -3928274700.409662
[2025-10-12 21:05:57] 2025-10-12 19:05:03,303 | INFO     | chi2: 0.0008421505463541073
[2025-10-12 21:05:57] 2025-10-12 19:05:03,303 | INFO     | -- intersect: -3928274700.409662
[2025-10-12 21:05:57] 2025-10-12 19:05:03,304 | INFO     | current memory leak: 2.23 B/s (using 204 data points, chi2=0.00)
[2025-10-12 21:05:57] 2025-10-12 19:05:03,304 | INFO     | could have reported an average CPU frequency of 1999 MHz (11 samples)
[2025-10-12 21:05:57] 2025-10-12 19:05:03,305 | INFO     | ..............................
[2025-10-12 21:05:57] 2025-10-12 19:05:03,305 | INFO     | . Timing measurements:
[2025-10-12 21:05:57] 2025-10-12 19:05:03,305 | INFO     | . get job = 0 s
[2025-10-12 21:05:57] 2025-10-12 19:05:03,305 | INFO     | . initial setup = 5 s
[2025-10-12 21:05:57] 2025-10-12 19:05:03,305 | INFO     | . payload setup = 136 s
[2025-10-12 21:05:57] 2025-10-12 19:05:03,305 | INFO     | . stage-in = 0 s
[2025-10-12 21:05:57] 2025-10-12 19:05:03,305 | INFO     | . payload execution = 14774 s
[2025-10-12 21:05:57] 2025-10-12 19:05:03,305 | INFO     | . stage-out = 3 s
[2025-10-12 21:05:57] 2025-10-12 19:05:03,305 | INFO     | . log creation = 1 s
[2025-10-12 21:05:57] 2025-10-12 19:05:03,305 | INFO     | ..............................
[2025-10-12 21:05:57] 2025-10-12 19:05:03,481 | INFO     | 
[2025-10-12 21:05:57] 2025-10-12 19:05:03,481 | INFO     | job summary report
[2025-10-12 21:05:57] 2025-10-12 19:05:03,481 | INFO     | --------------------------------------------------
[2025-10-12 21:05:57] 2025-10-12 19:05:03,481 | INFO     | PanDA job id: 6839866808
[2025-10-12 21:05:57] 2025-10-12 19:05:03,482 | INFO     | task id: 46676269
[2025-10-12 21:05:57] 2025-10-12 19:05:03,482 | INFO     | errors: (none)
[2025-10-12 21:05:57] 2025-10-12 19:05:03,482 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 21:05:57] 2025-10-12 19:05:03,482 | INFO     | pilot state: finished 
[2025-10-12 21:05:57] 2025-10-12 19:05:03,482 | INFO     | transexitcode: 0
[2025-10-12 21:05:57] 2025-10-12 19:05:03,482 | INFO     | exeerrorcode: 0
[2025-10-12 21:05:57] 2025-10-12 19:05:03,482 | INFO     | exeerrordiag: 
[2025-10-12 21:05:57] 2025-10-12 19:05:03,482 | INFO     | exitcode: 0
[2025-10-12 21:05:57] 2025-10-12 19:05:03,482 | INFO     | exitmsg: OK
[2025-10-12 21:05:57] 2025-10-12 19:05:03,482 | INFO     | cpuconsumptiontime: 55362 s
[2025-10-12 21:05:57] 2025-10-12 19:05:03,482 | INFO     | nevents: 400
[2025-10-12 21:05:57] 2025-10-12 19:05:03,483 | INFO     | neventsw: 0
[2025-10-12 21:05:57] 2025-10-12 19:05:03,483 | INFO     | pid: 24321
[2025-10-12 21:05:57] 2025-10-12 19:05:03,483 | INFO     | pgrp: 24321
[2025-10-12 21:05:57] 2025-10-12 19:05:03,483 | INFO     | corecount: 8
[2025-10-12 21:05:57] 2025-10-12 19:05:03,483 | INFO     | event service: False
[2025-10-12 21:05:57] 2025-10-12 19:05:03,483 | INFO     | sizes: {0: 2348686, 1: 2348885, 2: 2348885, 12: 2348913, 23: 2348941, 34: 2348969, 45: 2349125, 56: 2349153, 66: 2349181, 77: 2349209, 88: 2349265, 99: 2349573, 10
[2025-10-12 21:05:57] 2025-10-12 19:05:03,483 | INFO     | --------------------------------------------------
[2025-10-12 21:05:57] 2025-10-12 19:05:03,483 | INFO     | 
[2025-10-12 21:05:57] 2025-10-12 19:05:03,483 | INFO     | executing command: ls -lF /var/lib/boinc/slots/10
[2025-10-12 21:05:57] 2025-10-12 19:05:04,171 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 21:05:57] 2025-10-12 19:05:04,172 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 21:05:57] 2025-10-12 19:05:04,172 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 21:05:57] 2025-10-12 19:05:04,172 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 21:05:57] 2025-10-12 19:05:04,172 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 21:05:57] 2025-10-12 19:05:04,172 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 21:05:57] 2025-10-12 19:05:04,172 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 21:05:57] 2025-10-12 19:05:04,172 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 21:05:57] 2025-10-12 19:05:04,173 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 21:05:57] 2025-10-12 19:05:04,173 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 21:05:57] 2025-10-12 19:05:04,173 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 21:05:57] 2025-10-12 19:05:04,173 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 21:05:57] 2025-10-12 19:05:04,173 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 21:05:57] 2025-10-12 19:05:04,173 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 21:05:57] 2025-10-12 19:05:04,173 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 21:05:57] 2025-10-12 19:05:04,173 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 21:05:57] 2025-10-12 19:05:04,173 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 21:05:57] 2025-10-12 19:05:04,173 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 21:05:57] 2025-10-12 19:05:04,173 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 21:05:57] 2025-10-12 19:05:04,173 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 21:05:57] 2025-10-12 19:05:04,174 | INFO     | job 6839866808 has completed (purged errors)
[2025-10-12 21:05:57] 2025-10-12 19:05:04,174 | INFO     | overall cleanup function is called
[2025-10-12 21:05:57] 2025-10-12 19:05:05,183 | INFO     | --- collectZombieJob: --- 10, [24321]
[2025-10-12 21:05:57] 2025-10-12 19:05:05,183 | INFO     | zombie collector waiting for pid 24321
[2025-10-12 21:05:57] 2025-10-12 19:05:05,183 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 21:05:57] 2025-10-12 19:05:05,184 | INFO     | collected zombie processes
[2025-10-12 21:05:57] 2025-10-12 19:05:05,184 | INFO     | will attempt to kill all subprocesses of pid=24321
[2025-10-12 21:05:57] 2025-10-12 19:05:05,293 | INFO     | process IDs to be killed: [24321] (in reverse order)
[2025-10-12 21:05:57] 2025-10-12 19:05:05,632 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 21:05:57] 2025-10-12 19:05:05,632 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 21:05:57] 2025-10-12 19:05:05,641 | INFO     | did not find any defunct processes belonging to 24321
[2025-10-12 21:05:57] 2025-10-12 19:05:05,645 | INFO     | did not find any defunct processes belonging to 24321
[2025-10-12 21:05:57] 2025-10-12 19:05:05,645 | INFO     | ready for new job
[2025-10-12 21:05:57] 2025-10-12 19:05:05,645 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 21:05:57] 2025-10-12 19:05:05,647 | INFO     | ***************************************
[2025-10-12 21:05:57] 2025-10-12 19:05:05,647 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 21:05:57] 2025-10-12 19:05:05,648 | INFO     | ***************************************
[2025-10-12 21:05:57] 2025-10-12 19:05:05,648 | INFO     | 
[2025-10-12 21:05:57] 2025-10-12 19:05:05,648 | INFO     | pilot is running in a VM
[2025-10-12 21:05:57] 2025-10-12 19:05:05,648 | INFO     | architecture information:
[2025-10-12 21:05:57] 2025-10-12 19:05:05,661 | INFO     | executing command: cat /etc/os-release
[2025-10-12 21:05:57] 2025-10-12 19:05:05,960 | INFO     | cat /etc/os-release:
[2025-10-12 21:05:57] NAME="CentOS Linux"
[2025-10-12 21:05:57] VERSION="7 (Core)"
[2025-10-12 21:05:57] ID="centos"
[2025-10-12 21:05:57] ID_LIKE="rhel fedora"
[2025-10-12 21:05:57] VERSION_ID="7"
[2025-10-12 21:05:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 21:05:57] ANSI_COLOR="0;31"
[2025-10-12 21:05:57] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 21:05:57] HOME_URL="https://www.centos.org/"
[2025-10-12 21:05:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 21:05:57] 
[2025-10-12 21:05:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 21:05:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 21:05:57] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 21:05:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 21:05:57] 
[2025-10-12 21:05:57] 2025-10-12 19:05:05,961 | INFO     | ***************************************
[2025-10-12 21:05:57] 2025-10-12 19:05:06,464 | INFO     | executing command: df -mP /var/lib/boinc/slots/10
[2025-10-12 21:05:57] 2025-10-12 19:05:06,730 | INFO     | sufficient remaining disk space (495685992448 B)
[2025-10-12 21:05:57] 2025-10-12 19:05:06,730 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 21:05:57] 2025-10-12 19:05:06,730 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 21:05:57] 2025-10-12 19:05:06,730 | INFO     | update_server=False
[2025-10-12 21:05:57] 2025-10-12 19:05:06,730 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 21:05:57] 2025-10-12 19:05:06,731 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 21:05:57] 2025-10-12 19:05:06,731 | INFO     | aborting loop
[2025-10-12 21:05:57] 2025-10-12 19:05:06,731 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 21:05:57] 2025-10-12 19:05:06,965 | INFO     | all job control threads have been joined
[2025-10-12 21:05:57] 2025-10-12 19:05:07,418 | INFO     | all payload control threads have been joined
[2025-10-12 21:05:57] 2025-10-12 19:05:07,693 | INFO     | all data control threads have been joined
[2025-10-12 21:05:57] 2025-10-12 19:05:07,736 | INFO     | [job] retrieve thread has finished
[2025-10-12 21:05:57] 2025-10-12 19:05:07,737 | INFO     | [job] job monitor thread has finished
[2025-10-12 21:05:57] 2025-10-12 19:05:07,971 | INFO     | [job] control thread has finished
[2025-10-12 21:05:57] 2025-10-12 19:05:08,011 | INFO     | [payload] validate_post thread has finished
[2025-10-12 21:05:57] 2025-10-12 19:05:08,019 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 21:05:57] 2025-10-12 19:05:08,390 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 21:05:57] 2025-10-12 19:05:08,424 | INFO     | [payload] control thread has finished
[2025-10-12 21:05:57] 2025-10-12 19:05:08,454 | INFO     | [data] copytool_in thread has finished
[2025-10-12 21:05:57] 2025-10-12 19:05:08,484 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 21:05:57] 2025-10-12 19:05:08,494 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 21:05:57] 2025-10-12 19:05:08,561 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 21:05:57] 2025-10-12 19:05:08,625 | INFO     | [job] validate thread has finished
[2025-10-12 21:05:57] 2025-10-12 19:05:08,699 | INFO     | [data] control thread has finished
[2025-10-12 21:05:57] 2025-10-12 19:05:08,738 | INFO     | [data] copytool_out thread has finished
[2025-10-12 21:05:57] 2025-10-12 19:05:08,791 | INFO     | [payload] failed_post thread has finished
[2025-10-12 21:05:57] 2025-10-12 19:05:09,194 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 21:05:57] 2025-10-12 19:05:09,500 | INFO     | [job] queue monitor thread has finished
[2025-10-12 21:05:57] 2025-10-12 19:05:12,028 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 21:05:57] 2025-10-12 19:05:36,388 | INFO     | PID=16560 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 21:05:57] 2025-10-12 19:05:36,389 | INFO     | .. there are 9 such processes running
[2025-10-12 21:05:57] 2025-10-12 19:05:36,389 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 21:05:57] 2025-10-12 19:05:36,389 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 21:05:57] 2025-10-12 19:05:36,390 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 21:05:57] 2025-10-12 19:05:47,182 | INFO     | [monitor] cgroup control has ended
[2025-10-12 21:05:57] 2025-10-12 19:05:49,002 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140616376817472)>', '<ExcThread(monitor, started 140615811589888)>']
[2025-10-12 21:05:57] 2025-10-12 19:05:49,464 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 21:05:57] 2025-10-12 19:05:49,464 | INFO     | [monitor] control thread has ended
[2025-10-12 21:05:57] 2025-10-12 19:05:54,028 | INFO     | all workflow threads have been joined
[2025-10-12 21:05:57] 2025-10-12 19:05:54,028 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 21:05:57] 2025-10-12 19:05:54,029 | INFO     | traces error code: 0
[2025-10-12 21:05:57] 2025-10-12 19:05:54,029 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 21:05:57] 2025-10-12 19:05:54,344 [wrapper] ==== pilot stdout END ====
[2025-10-12 21:05:57] 2025-10-12 19:05:54,439 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 21:05:57] 2025-10-12 19:05:54,497 [wrapper] pilotpid: 16560
[2025-10-12 21:05:57] 2025-10-12 19:05:54,598 [wrapper] Pilot exit status: 0
[2025-10-12 21:05:57] 2025-10-12 19:05:54,757 [wrapper] pandaids: 6839866808
[2025-10-12 21:05:57] 2025-10-12 19:05:54,808 [wrapper] cleanup supervisor_pilot 18666 16561
[2025-10-12 21:05:57] 2025-10-12 19:05:54,815 [wrapper] Test setup, not cleaning
[2025-10-12 21:05:57] 2025-10-12 19:05:54,820 [wrapper] apfmon messages muted
[2025-10-12 21:05:57] 2025-10-12 19:05:54,832 [wrapper] ==== wrapper stdout END ====
[2025-10-12 21:05:57] 2025-10-12 19:05:54,843 [wrapper] ==== wrapper stderr END ====
[2025-10-12 21:05:57]  *** Error codes and diagnostics ***
[2025-10-12 21:05:57]     "exeErrorCode": 0,
[2025-10-12 21:05:57]     "exeErrorDiag": "",
[2025-10-12 21:05:57]     "pilotErrorCode": 0,
[2025-10-12 21:05:57]     "pilotErrorDiag": "",
[2025-10-12 21:05:57]  *** Listing of results directory ***
[2025-10-12 21:05:57] total 412924
[2025-10-12 21:05:57] -rwx------. 1 boinc boinc     36292 Oct 12 12:38 runpilot2-wrapper.sh
[2025-10-12 21:05:57] -rw-r--r--. 1 boinc boinc      5112 Oct 12 12:38 queuedata.json
[2025-10-12 21:05:57] -rw-r--r--. 1 boinc boinc    557409 Oct 12 12:38 pilot3.tar.gz
[2025-10-12 21:05:57] -rw-r--r--. 1 boinc boinc       100 Oct 12 16:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 21:05:57] -rwxr-xr-x. 1 boinc boinc      7986 Oct 12 16:47 run_atlas
[2025-10-12 21:05:57] -rw-r--r--. 1 boinc boinc       105 Oct 12 16:47 job.xml
[2025-10-12 21:05:57] -rw-r--r--. 1 boinc boinc      6382 Oct 12 16:47 init_data.xml
[2025-10-12 21:05:57] -rw-r--r--. 2 boinc boinc 221403615 Oct 12 16:47 EVNT.46676267._003624.pool.root.1
[2025-10-12 21:05:57] -rw-r--r--. 2 boinc boinc     15120 Oct 12 16:47 start_atlas.sh
[2025-10-12 21:05:57] drwxrwx--x. 2 boinc boinc        68 Oct 12 16:47 shared
[2025-10-12 21:05:57] -rw-r--r--. 2 boinc boinc    569673 Oct 12 16:47 input.tar.gz
[2025-10-12 21:05:57] -rw-r--r--. 1 boinc boinc         0 Oct 12 16:47 boinc_lockfile
[2025-10-12 21:05:57] -rw-r--r--. 1 boinc boinc      2549 Oct 12 16:47 pandaJob.out
[2025-10-12 21:05:57] -rw-------. 1 boinc boinc    975528 Oct 12 16:51 agis_schedconf.cvmfs.json
[2025-10-12 21:05:57] drwx------. 5 boinc boinc      4096 Oct 12 16:51 pilot3
[2025-10-12 21:05:57] -rw-------. 1 boinc boinc 192517406 Oct 12 21:01 HITS.46676269._076127.pool.root.1
[2025-10-12 21:05:57] -rw-r--r--. 1 boinc boinc       531 Oct 12 21:02 boinc_task_state.xml
[2025-10-12 21:05:57] -rw-------. 1 boinc boinc      1013 Oct 12 21:03 memory_monitor_summary.json
[2025-10-12 21:05:57] -rw-------. 1 boinc boinc   1560580 Oct 12 21:03 agis_ddmendpoints.agis.ALL.json
[2025-10-12 21:05:57] -rw-------. 1 boinc boinc    467520 Oct 12 21:03 log.46676269._076127.job.log.tgz.1
[2025-10-12 21:05:57] -rw-------. 1 boinc boinc      7776 Oct 12 21:05 heartbeat.json
[2025-10-12 21:05:57] -rw-------. 1 boinc boinc        95 Oct 12 21:05 pilot_heartbeat.json
[2025-10-12 21:05:57] -rw-r--r--. 1 boinc boinc      8192 Oct 12 21:05 boinc_mmap_file
[2025-10-12 21:05:57] -rw-r--r--. 1 boinc boinc        28 Oct 12 21:05 wrapper_checkpoint.txt
[2025-10-12 21:05:57] -rw-------. 1 boinc boinc      4885 Oct 12 21:05 pilotlog.txt
[2025-10-12 21:05:57] -rw-------. 1 boinc boinc   2042103 Oct 12 21:05 log.46676269._076127.job.log.1
[2025-10-12 21:05:57] -rw-------. 1 boinc boinc       357 Oct 12 21:05 output.list
[2025-10-12 21:05:57] -rw-r--r--. 1 boinc boinc       620 Oct 12 21:05 runtime_log
[2025-10-12 21:05:57] -rw-------. 1 boinc boinc   2529280 Oct 12 21:05 result.tar.gz
[2025-10-12 21:05:57] -rw-r--r--. 1 boinc boinc      8717 Oct 12 21:05 runtime_log.err
[2025-10-12 21:05:57] -rw-------. 1 boinc boinc       657 Oct 12 21:05 1SRKDm5d8R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmrSjNDmPMHCcm.diag
[2025-10-12 21:05:57] -rw-r--r--. 1 boinc boinc     20582 Oct 12 21:05 stderr.txt
[2025-10-12 21:05:57] HITS file was successfully produced:
[2025-10-12 21:05:57] -rw-------. 1 boinc boinc 192517406 Oct 12 21:01 shared/HITS.pool.root.1
[2025-10-12 21:05:57]  *** Contents of shared directory: ***
[2025-10-12 21:05:57] total 407272
[2025-10-12 21:05:57] -rw-r--r--. 2 boinc boinc 221403615 Oct 12 16:47 ATLAS.root_0
[2025-10-12 21:05:57] -rw-r--r--. 2 boinc boinc     15120 Oct 12 16:47 start_atlas.sh
[2025-10-12 21:05:57] -rw-r--r--. 2 boinc boinc    569673 Oct 12 16:47 input.tar.gz
[2025-10-12 21:05:57] -rw-------. 1 boinc boinc 192517406 Oct 12 21:01 HITS.pool.root.1
[2025-10-12 21:05:57] -rw-------. 1 boinc boinc   2529280 Oct 12 21:05 result.tar.gz
21:05:59 (11886): run_atlas exited; CPU time 55573.278399
21:05:59 (11886): called boinc_finish(0)

</stderr_txt>
]]>

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