Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
10:44:22 (28262): wrapper (7.7.26015): starting
10:44:22 (28262): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 10:44:22] Arguments: --nthreads 8
[2025-10-12 10:44:22] Threads: 8
[2025-10-12 10:44:22] Checking for CVMFS
[2025-10-12 10:44:22] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 10:44:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 10:44:22] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 10:44:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 10:44:22] 2.11.2.0 28294 53033 135012 151623 1 188 9521991 18432001 1833 130560 0 48454006 99.974 2364505 33443 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 10:44:22] CVMFS is ok
[2025-10-12 10:44:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 10:44:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 10:44:22] Further information can be found at the LHC@home message board.
[2025-10-12 10:44:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 10:44:22] Checking for apptainer binary...
[2025-10-12 10:44:22] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 10:44:22] Running /usr/bin/apptainer --version
[2025-10-12 10:44:22] apptainer version 1.3.2-1.el7
[2025-10-12 10:44:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 10:44:23] c-206-25.aglt2.org
[2025-10-12 10:44:23] apptainer works
[2025-10-12 10:44:23] Set ATHENA_PROC_NUMBER=8
[2025-10-12 10:44:23] Set ATHENA_CORE_NUMBER=8
[2025-10-12 10:44:23] Starting ATLAS job with PandaID=6839868683
[2025-10-12 10:44:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 13:49:57]  *** The last 200 lines of the pilot log: ***
[2025-10-12 13:49:57] 2025-10-12 17:49:16,987 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 13:49:57] 2025-10-12 17:49:16,987 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 13:49:57] 2025-10-12 17:49:16,987 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 13:49:57] 2025-10-12 17:49:16,993 | INFO     | fitting pss+swap vs Time
[2025-10-12 13:49:57] 2025-10-12 17:49:16,993 | INFO     | sum of square deviations: 1869302025.5
[2025-10-12 13:49:57] 2025-10-12 17:49:16,995 | INFO     | sum of deviations: 13473269104.000004
[2025-10-12 13:49:57] 2025-10-12 17:49:16,995 | INFO     | mean x: 1760285819.5
[2025-10-12 13:49:57] 2025-10-12 17:49:16,995 | INFO     | mean y: 2461384.6263736263
[2025-10-12 13:49:57] 2025-10-12 17:49:16,996 | INFO     | -- intersect: -12685057391.123587
[2025-10-12 13:49:57] 2025-10-12 17:49:16,996 | INFO     | intersect: -12685057391.123587
[2025-10-12 13:49:57] 2025-10-12 17:49:16,996 | INFO     | chi2: 2.3015318429092444
[2025-10-12 13:49:57] 2025-10-12 17:49:16,997 | INFO     | sum of square deviations: 1719429448.0
[2025-10-12 13:49:57] 2025-10-12 17:49:16,998 | INFO     | sum of deviations: 25228543662.999996
[2025-10-12 13:49:57] 2025-10-12 17:49:16,998 | INFO     | mean x: 1760285667.0
[2025-10-12 13:49:57] 2025-10-12 17:49:16,998 | INFO     | mean y: 2473067.5310734464
[2025-10-12 13:49:57] 2025-10-12 17:49:16,999 | INFO     | -- intersect: -25825538579.54092
[2025-10-12 13:49:57] 2025-10-12 17:49:16,999 | INFO     | intersect: -25825538579.54092
[2025-10-12 13:49:57] 2025-10-12 17:49:16,999 | INFO     | chi2: 1.4903252676634997
[2025-10-12 13:49:57] 2025-10-12 17:49:16,999 | INFO     | current chi2=1.4903252676634997 (change=35.246376353426484 %)
[2025-10-12 13:49:57] 2025-10-12 17:49:17,000 | INFO     | sum of square deviations: 1577789583.0
[2025-10-12 13:49:57] 2025-10-12 17:49:17,001 | INFO     | sum of deviations: 24475935850.000004
[2025-10-12 13:49:57] 2025-10-12 17:49:17,001 | INFO     | mean x: 1760285514.5
[2025-10-12 13:49:57] 2025-10-12 17:49:17,002 | INFO     | mean y: 2472257.034883721
[2025-10-12 13:49:57] 2025-10-12 17:49:17,002 | INFO     | -- intersect: -27304486664.994106
[2025-10-12 13:49:57] 2025-10-12 17:49:17,002 | INFO     | intersect: -27304486664.994106
[2025-10-12 13:49:57] 2025-10-12 17:49:17,002 | INFO     | chi2: 1.4914292243287044
[2025-10-12 13:49:57] 2025-10-12 17:49:17,003 | INFO     | current chi2=1.4914292243287044 (change=-0.07407488077656 %)
[2025-10-12 13:49:57] 2025-10-12 17:49:17,003 | INFO     | right removable region: 171
[2025-10-12 13:49:57] 2025-10-12 17:49:17,003 | INFO     | sum of square deviations: 1719429448.0
[2025-10-12 13:49:57] 2025-10-12 17:49:17,005 | INFO     | sum of deviations: -14498638417.0
[2025-10-12 13:49:57] 2025-10-12 17:49:17,005 | INFO     | mean x: 1760285972.0
[2025-10-12 13:49:57] 2025-10-12 17:49:17,005 | INFO     | mean y: 2489518.7966101696
[2025-10-12 13:49:57] 2025-10-12 17:49:17,005 | INFO     | -- intersect: 14845639872.090654
[2025-10-12 13:49:57] 2025-10-12 17:49:17,005 | INFO     | intersect: 14845639872.090654
[2025-10-12 13:49:57] 2025-10-12 17:49:17,006 | INFO     | chi2: 0.8930567709486283
[2025-10-12 13:49:57] 2025-10-12 17:49:17,006 | INFO     | current chi2=0.8930567709486283 (change=61.19728807141931 %)
[2025-10-12 13:49:57] 2025-10-12 17:49:17,006 | INFO     | sum of square deviations: 1577789583.0
[2025-10-12 13:49:57] 2025-10-12 17:49:17,008 | INFO     | sum of deviations: -17690591090.0
[2025-10-12 13:49:57] 2025-10-12 17:49:17,008 | INFO     | mean x: 1760286124.5
[2025-10-12 13:49:57] 2025-10-12 17:49:17,008 | INFO     | mean y: 2492900.9534883723
[2025-10-12 13:49:57] 2025-10-12 17:49:17,008 | INFO     | -- intersect: 19739283132.969063
[2025-10-12 13:49:57] 2025-10-12 17:49:17,009 | INFO     | intersect: 19739283132.969063
[2025-10-12 13:49:57] 2025-10-12 17:49:17,009 | INFO     | chi2: 0.8621766562888363
[2025-10-12 13:49:57] 2025-10-12 17:49:17,009 | INFO     | current chi2=0.8621766562888363 (change=3.4577997350594343 %)
[2025-10-12 13:49:57] 2025-10-12 17:49:17,009 | INFO     | left removable region: 20
[2025-10-12 13:49:57] 2025-10-12 17:49:17,010 | INFO     | sum of square deviations: 1067554900.0
[2025-10-12 13:49:57] 2025-10-12 17:49:17,011 | INFO     | sum of deviations: -1664583981.9999995
[2025-10-12 13:49:57] 2025-10-12 17:49:17,011 | INFO     | mean x: 1760286094.0
[2025-10-12 13:49:57] 2025-10-12 17:49:17,011 | INFO     | mean y: 2501119.5562913907
[2025-10-12 13:49:57] 2025-10-12 17:49:17,011 | INFO     | -- intersect: 2747225569.614781
[2025-10-12 13:49:57] 2025-10-12 17:49:17,012 | INFO     | intersect: 2747225569.614781
[2025-10-12 13:49:57] 2025-10-12 17:49:17,012 | INFO     | chi2: 0.01886833217657772
[2025-10-12 13:49:57] 2025-10-12 17:49:17,012 | INFO     | -- intersect: 2747225569.614781
[2025-10-12 13:49:57] 2025-10-12 17:49:17,013 | INFO     | current memory leak: -1.56 B/s (using 151 data points, chi2=0.02)
[2025-10-12 13:49:57] 2025-10-12 17:49:17,013 | INFO     | could have reported an average CPU frequency of 2525 MHz (10 samples)
[2025-10-12 13:49:57] 2025-10-12 17:49:17,013 | INFO     | ..............................
[2025-10-12 13:49:57] 2025-10-12 17:49:17,014 | INFO     | . Timing measurements:
[2025-10-12 13:49:57] 2025-10-12 17:49:17,014 | INFO     | . get job = 0 s
[2025-10-12 13:49:57] 2025-10-12 17:49:17,014 | INFO     | . initial setup = 2 s
[2025-10-12 13:49:57] 2025-10-12 17:49:17,014 | INFO     | . payload setup = 4 s
[2025-10-12 13:49:57] 2025-10-12 17:49:17,014 | INFO     | . stage-in = 0 s
[2025-10-12 13:49:57] 2025-10-12 17:49:17,014 | INFO     | . payload execution = 11050 s
[2025-10-12 13:49:57] 2025-10-12 17:49:17,015 | INFO     | . stage-out = 2 s
[2025-10-12 13:49:57] 2025-10-12 17:49:17,015 | INFO     | . log creation = 0 s
[2025-10-12 13:49:57] 2025-10-12 17:49:17,015 | INFO     | ..............................
[2025-10-12 13:49:57] 2025-10-12 17:49:17,144 | INFO     | 
[2025-10-12 13:49:57] 2025-10-12 17:49:17,145 | INFO     | job summary report
[2025-10-12 13:49:57] 2025-10-12 17:49:17,145 | INFO     | --------------------------------------------------
[2025-10-12 13:49:57] 2025-10-12 17:49:17,145 | INFO     | PanDA job id: 6839868683
[2025-10-12 13:49:57] 2025-10-12 17:49:17,145 | INFO     | task id: 46676269
[2025-10-12 13:49:57] 2025-10-12 17:49:17,145 | INFO     | errors: (none)
[2025-10-12 13:49:57] 2025-10-12 17:49:17,145 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 13:49:57] 2025-10-12 17:49:17,145 | INFO     | pilot state: finished 
[2025-10-12 13:49:57] 2025-10-12 17:49:17,145 | INFO     | transexitcode: 0
[2025-10-12 13:49:57] 2025-10-12 17:49:17,145 | INFO     | exeerrorcode: 0
[2025-10-12 13:49:57] 2025-10-12 17:49:17,145 | INFO     | exeerrordiag: 
[2025-10-12 13:49:57] 2025-10-12 17:49:17,146 | INFO     | exitcode: 0
[2025-10-12 13:49:57] 2025-10-12 17:49:17,146 | INFO     | exitmsg: OK
[2025-10-12 13:49:57] 2025-10-12 17:49:17,146 | INFO     | cpuconsumptiontime: 83560 s
[2025-10-12 13:49:57] 2025-10-12 17:49:17,146 | INFO     | nevents: 400
[2025-10-12 13:49:57] 2025-10-12 17:49:17,146 | INFO     | neventsw: 0
[2025-10-12 13:49:57] 2025-10-12 17:49:17,146 | INFO     | pid: 6092
[2025-10-12 13:49:57] 2025-10-12 17:49:17,146 | INFO     | pgrp: 6092
[2025-10-12 13:49:57] 2025-10-12 17:49:17,146 | INFO     | corecount: 8
[2025-10-12 13:49:57] 2025-10-12 17:49:17,146 | INFO     | event service: False
[2025-10-12 13:49:57] 2025-10-12 17:49:17,146 | INFO     | sizes: {0: 2348857, 1: 2348857, 4: 2349147, 11: 2349175, 11058: 2378421, 11059: 2378420, 11062: 2387658, 11067: 2387796}
[2025-10-12 13:49:57] 2025-10-12 17:49:17,147 | INFO     | --------------------------------------------------
[2025-10-12 13:49:57] 2025-10-12 17:49:17,147 | INFO     | 
[2025-10-12 13:49:57] 2025-10-12 17:49:17,147 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-12 13:49:57] 2025-10-12 17:49:17,165 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 13:49:57] 2025-10-12 17:49:17,165 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 13:49:57] 2025-10-12 17:49:17,165 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 13:49:57] 2025-10-12 17:49:17,166 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 13:49:57] 2025-10-12 17:49:17,166 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 13:49:57] 2025-10-12 17:49:17,166 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 13:49:57] 2025-10-12 17:49:17,166 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 13:49:57] 2025-10-12 17:49:17,166 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 13:49:57] 2025-10-12 17:49:17,166 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 13:49:57] 2025-10-12 17:49:17,167 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 13:49:57] 2025-10-12 17:49:17,167 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 13:49:57] 2025-10-12 17:49:17,167 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 13:49:57] 2025-10-12 17:49:17,167 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 13:49:57] 2025-10-12 17:49:17,167 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 13:49:57] 2025-10-12 17:49:17,168 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 13:49:57] 2025-10-12 17:49:17,168 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 13:49:57] 2025-10-12 17:49:17,168 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 13:49:57] 2025-10-12 17:49:17,168 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 13:49:57] 2025-10-12 17:49:17,168 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 13:49:57] 2025-10-12 17:49:17,168 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 13:49:57] 2025-10-12 17:49:17,169 | INFO     | job 6839868683 has completed (purged errors)
[2025-10-12 13:49:57] 2025-10-12 17:49:17,169 | INFO     | overall cleanup function is called
[2025-10-12 13:49:57] 2025-10-12 17:49:18,177 | INFO     | --- collectZombieJob: --- 10, [6092]
[2025-10-12 13:49:57] 2025-10-12 17:49:18,177 | INFO     | zombie collector waiting for pid 6092
[2025-10-12 13:49:57] 2025-10-12 17:49:18,178 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 13:49:57] 2025-10-12 17:49:18,178 | INFO     | collected zombie processes
[2025-10-12 13:49:57] 2025-10-12 17:49:18,178 | INFO     | will attempt to kill all subprocesses of pid=6092
[2025-10-12 13:49:57] 2025-10-12 17:49:18,331 | INFO     | process IDs to be killed: [6092] (in reverse order)
[2025-10-12 13:49:57] 2025-10-12 17:49:18,391 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 13:49:57] 2025-10-12 17:49:18,391 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 13:49:57] 2025-10-12 17:49:18,396 | INFO     | did not find any defunct processes belonging to 6092
[2025-10-12 13:49:57] 2025-10-12 17:49:18,401 | INFO     | did not find any defunct processes belonging to 6092
[2025-10-12 13:49:57] 2025-10-12 17:49:18,401 | INFO     | ready for new job
[2025-10-12 13:49:57] 2025-10-12 17:49:18,401 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 13:49:57] 2025-10-12 17:49:18,403 | INFO     | ***************************************
[2025-10-12 13:49:57] 2025-10-12 17:49:18,403 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 13:49:57] 2025-10-12 17:49:18,403 | INFO     | ***************************************
[2025-10-12 13:49:57] 2025-10-12 17:49:18,403 | INFO     | 
[2025-10-12 13:49:57] 2025-10-12 17:49:18,405 | INFO     | architecture information:
[2025-10-12 13:49:57] 2025-10-12 17:49:18,405 | INFO     | executing command: cat /etc/os-release
[2025-10-12 13:49:57] 2025-10-12 17:49:18,416 | INFO     | cat /etc/os-release:
[2025-10-12 13:49:57] NAME="CentOS Linux"
[2025-10-12 13:49:57] VERSION="7 (Core)"
[2025-10-12 13:49:57] ID="centos"
[2025-10-12 13:49:57] ID_LIKE="rhel fedora"
[2025-10-12 13:49:57] VERSION_ID="7"
[2025-10-12 13:49:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 13:49:57] ANSI_COLOR="0;31"
[2025-10-12 13:49:57] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 13:49:57] HOME_URL="https://www.centos.org/"
[2025-10-12 13:49:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 13:49:57] 
[2025-10-12 13:49:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 13:49:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 13:49:57] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 13:49:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 13:49:57] 
[2025-10-12 13:49:57] 2025-10-12 17:49:18,417 | INFO     | ***************************************
[2025-10-12 13:49:57] 2025-10-12 17:49:18,919 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-12 13:49:57] 2025-10-12 17:49:18,934 | INFO     | sufficient remaining disk space (28382855168 B)
[2025-10-12 13:49:57] 2025-10-12 17:49:18,934 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 13:49:57] 2025-10-12 17:49:18,934 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 13:49:57] 2025-10-12 17:49:18,934 | INFO     | update_server=False
[2025-10-12 13:49:57] 2025-10-12 17:49:18,935 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 13:49:57] 2025-10-12 17:49:18,935 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 13:49:57] 2025-10-12 17:49:18,936 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 13:49:57] 2025-10-12 17:49:19,284 | INFO     | all data control threads have been joined
[2025-10-12 13:49:57] 2025-10-12 17:49:19,387 | INFO     | all job control threads have been joined
[2025-10-12 13:49:57] 2025-10-12 17:49:19,454 | INFO     | all payload control threads have been joined
[2025-10-12 13:49:57] 2025-10-12 17:49:19,535 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 13:49:57] 2025-10-12 17:49:19,535 | INFO     | aborting loop
[2025-10-12 13:49:57] 2025-10-12 17:49:19,794 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 13:49:57] 2025-10-12 17:49:19,940 | INFO     | [job] retrieve thread has finished
[2025-10-12 13:49:57] 2025-10-12 17:49:19,941 | INFO     | [job] queue monitor thread has finished
[2025-10-12 13:49:57] 2025-10-12 17:49:20,289 | INFO     | [data] control thread has finished
[2025-10-12 13:49:57] 2025-10-12 17:49:20,341 | INFO     | [payload] failed_post thread has finished
[2025-10-12 13:49:57] 2025-10-12 17:49:20,392 | INFO     | [job] control thread has finished
[2025-10-12 13:49:57] 2025-10-12 17:49:20,398 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 13:49:57] 2025-10-12 17:49:20,405 | INFO     | [job] validate thread has finished
[2025-10-12 13:49:57] 2025-10-12 17:49:20,439 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 13:49:57] 2025-10-12 17:49:20,459 | INFO     | [payload] control thread has finished
[2025-10-12 13:49:57] 2025-10-12 17:49:20,540 | INFO     | [job] job monitor thread has finished
[2025-10-12 13:49:57] 2025-10-12 17:49:20,724 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 13:49:57] 2025-10-12 17:49:20,744 | INFO     | [data] copytool_in thread has finished
[2025-10-12 13:49:57] 2025-10-12 17:49:20,993 | INFO     | [payload] validate_post thread has finished
[2025-10-12 13:49:57] 2025-10-12 17:49:21,224 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 13:49:57] 2025-10-12 17:49:21,800 | INFO     | [data] copytool_out thread has finished
[2025-10-12 13:49:57] 2025-10-12 17:49:22,941 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 13:49:57] 2025-10-12 17:49:48,620 | INFO     | PID=31979 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 13:49:57] 2025-10-12 17:49:48,620 | INFO     | .. there are 3 such processes running
[2025-10-12 13:49:57] 2025-10-12 17:49:48,621 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 13:49:57] 2025-10-12 17:49:48,621 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 13:49:57] 2025-10-12 17:49:48,621 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 13:49:57] 2025-10-12 17:49:51,457 | INFO     | [monitor] cgroup control has ended
[2025-10-12 13:49:57] 2025-10-12 17:49:52,508 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140440583550784)>', '<ExcThread(monitor, started 140439852148480)>']
[2025-10-12 13:49:57] 2025-10-12 17:49:52,641 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 13:49:57] 2025-10-12 17:49:52,641 | INFO     | [monitor] control thread has ended
[2025-10-12 13:49:57] 2025-10-12 17:49:57,534 | INFO     | all workflow threads have been joined
[2025-10-12 13:49:57] 2025-10-12 17:49:57,534 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 13:49:57] 2025-10-12 17:49:57,534 | INFO     | traces error code: 0
[2025-10-12 13:49:57] 2025-10-12 17:49:57,535 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 13:49:57] 2025-10-12 17:49:57,668 [wrapper] ==== pilot stdout END ====
[2025-10-12 13:49:57] 2025-10-12 17:49:57,671 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 13:49:57] 2025-10-12 17:49:57,673 [wrapper] pilotpid: 31979
[2025-10-12 13:49:57] 2025-10-12 17:49:57,676 [wrapper] Pilot exit status: 0
[2025-10-12 13:49:57] 2025-10-12 17:49:57,687 [wrapper] pandaids: 6839868683
[2025-10-12 13:49:57] 2025-10-12 17:49:57,720 [wrapper] cleanup supervisor_pilot 31644 31980
[2025-10-12 13:49:57] 2025-10-12 17:49:57,722 [wrapper] Test setup, not cleaning
[2025-10-12 13:49:57] 2025-10-12 17:49:57,724 [wrapper] apfmon messages muted
[2025-10-12 13:49:57] 2025-10-12 17:49:57,726 [wrapper] ==== wrapper stdout END ====
[2025-10-12 13:49:57] 2025-10-12 17:49:57,728 [wrapper] ==== wrapper stderr END ====
[2025-10-12 13:49:57]  *** Error codes and diagnostics ***
[2025-10-12 13:49:57]     "exeErrorCode": 0,
[2025-10-12 13:49:57]     "exeErrorDiag": "",
[2025-10-12 13:49:57]     "pilotErrorCode": 0,
[2025-10-12 13:49:57]     "pilotErrorDiag": "",
[2025-10-12 13:49:57]  *** Listing of results directory ***
[2025-10-12 13:49:57] total 416980
[2025-10-12 13:49:57] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 06:57 pilot3.tar.gz
[2025-10-12 13:49:57] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 06:59 queuedata.json
[2025-10-12 13:49:57] -rwx------ 1 boincer umatlas     36292 Oct 12 07:01 runpilot2-wrapper.sh
[2025-10-12 13:49:57] -rw-r--r-- 1 boincer umatlas       100 Oct 12 10:44 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 13:49:57] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 10:44 run_atlas
[2025-10-12 13:49:57] -rw-r--r-- 1 boincer umatlas       105 Oct 12 10:44 job.xml
[2025-10-12 13:49:57] -rw-r--r-- 2 boincer umatlas 221365043 Oct 12 10:44 EVNT.46676267._003653.pool.root.1
[2025-10-12 13:49:57] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 10:44 start_atlas.sh
[2025-10-12 13:49:57] drwxrwx--x 2 boincer umatlas      4096 Oct 12 10:44 shared
[2025-10-12 13:49:57] -rw-r--r-- 2 boincer umatlas    569685 Oct 12 10:44 input.tar.gz
[2025-10-12 13:49:57] -rw-r--r-- 1 boincer umatlas         0 Oct 12 10:44 boinc_lockfile
[2025-10-12 13:49:57] -rw-r--r-- 1 boincer umatlas      2550 Oct 12 10:44 pandaJob.out
[2025-10-12 13:49:57] -rw------- 1 boincer umatlas    975528 Oct 12 10:44 agis_schedconf.cvmfs.json
[2025-10-12 13:49:57] drwx------ 5 boincer umatlas      4096 Oct 12 10:44 pilot3
[2025-10-12 13:49:57] -rw------- 1 boincer umatlas 197745377 Oct 12 13:48 HITS.46676269._076632.pool.root.1
[2025-10-12 13:49:57] -rw-r--r-- 1 boincer umatlas       530 Oct 12 13:48 boinc_task_state.xml
[2025-10-12 13:49:57] -rw-r--r-- 1 boincer umatlas      5951 Oct 12 13:48 init_data.xml
[2025-10-12 13:49:57] -rw------- 1 boincer umatlas      1051 Oct 12 13:49 memory_monitor_summary.json
[2025-10-12 13:49:57] -rw------- 1 boincer umatlas   1560580 Oct 12 13:49 agis_ddmendpoints.agis.ALL.json
[2025-10-12 13:49:57] -rw------- 1 boincer umatlas    429948 Oct 12 13:49 log.46676269._076632.job.log.tgz.1
[2025-10-12 13:49:57] -rw------- 1 boincer umatlas      7853 Oct 12 13:49 heartbeat.json
[2025-10-12 13:49:57] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 13:49 boinc_mmap_file
[2025-10-12 13:49:57] -rw-r--r-- 1 boincer umatlas        28 Oct 12 13:49 wrapper_checkpoint.txt
[2025-10-12 13:49:57] -rw------- 1 boincer umatlas        95 Oct 12 13:49 pilot_heartbeat.json
[2025-10-12 13:49:57] -rw------- 1 boincer umatlas      4821 Oct 12 13:49 pilotlog.txt
[2025-10-12 13:49:57] -rw------- 1 boincer umatlas   1559221 Oct 12 13:49 log.46676269._076632.job.log.1
[2025-10-12 13:49:57] -rw------- 1 boincer umatlas       357 Oct 12 13:49 output.list
[2025-10-12 13:49:57] -rw-r--r-- 1 boincer umatlas       620 Oct 12 13:49 runtime_log
[2025-10-12 13:49:57] -rw------- 1 boincer umatlas   2007040 Oct 12 13:49 result.tar.gz
[2025-10-12 13:49:57] -rw-r--r-- 1 boincer umatlas      8704 Oct 12 13:49 runtime_log.err
[2025-10-12 13:49:57] -rw------- 1 boincer umatlas       661 Oct 12 13:49 QfxKDmF08R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmfXjNDmqxtGin.diag
[2025-10-12 13:49:57] -rw-r--r-- 1 boincer umatlas     20877 Oct 12 13:49 stderr.txt
[2025-10-12 13:49:57] HITS file was successfully produced:
[2025-10-12 13:49:57] -rw------- 1 boincer umatlas 197745377 Oct 12 13:48 shared/HITS.pool.root.1
[2025-10-12 13:49:57]  *** Contents of shared directory: ***
[2025-10-12 13:49:57] total 411832
[2025-10-12 13:49:57] -rw-r--r-- 2 boincer umatlas 221365043 Oct 12 10:44 ATLAS.root_0
[2025-10-12 13:49:57] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 10:44 start_atlas.sh
[2025-10-12 13:49:57] -rw-r--r-- 2 boincer umatlas    569685 Oct 12 10:44 input.tar.gz
[2025-10-12 13:49:57] -rw------- 1 boincer umatlas 197745377 Oct 12 13:48 HITS.pool.root.1
[2025-10-12 13:49:57] -rw------- 1 boincer umatlas   2007040 Oct 12 13:49 result.tar.gz
13:49:59 (28262): run_atlas exited; CPU time 83691.111959
13:49:59 (28262): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN