Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
10:42:00 (16595): wrapper (7.7.26015): starting
10:42:00 (16595): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 10:42:00] Arguments: --nthreads 8
[2025-10-12 10:42:00] Threads: 8
[2025-10-12 10:42:00] Checking for CVMFS
[2025-10-12 10:42:01] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 10:42:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 10:42:01] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 10:42:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 10:42:01] 2.11.2.0 2843 2969 71260 151623 1 58 12234625 20275201 1 130560 0 2084613 99.990 102357 35319 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 10:42:01] CVMFS is ok
[2025-10-12 10:42:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 10:42:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 10:42:01] Further information can be found at the LHC@home message board.
[2025-10-12 10:42:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 10:42:01] Checking for apptainer binary...
[2025-10-12 10:42:01] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 10:42:01] Running /usr/bin/apptainer --version
[2025-10-12 10:42:01] apptainer version 1.3.2-1.el7
[2025-10-12 10:42:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 10:42:03] c-204-34.aglt2.org
[2025-10-12 10:42:03] apptainer works
[2025-10-12 10:42:03] Set ATHENA_PROC_NUMBER=8
[2025-10-12 10:42:03] Set ATHENA_CORE_NUMBER=8
[2025-10-12 10:42:03] Starting ATLAS job with PandaID=6839869891
[2025-10-12 10:42:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 12:43:38]  *** The last 200 lines of the pilot log: ***
[2025-10-12 12:43:38] 2025-10-12 16:42:53,624 | INFO     | time since job start (7233s) is within the limit (172800.0s)
[2025-10-12 12:43:38] 2025-10-12 16:42:55,629 | INFO     | time since job start (7235s) is within the limit (172800.0s)
[2025-10-12 12:43:38] 2025-10-12 16:42:55,650 | INFO     | monitor loop #538: job 0:6839869891 is in state 'finished'
[2025-10-12 12:43:38] 2025-10-12 16:42:55,650 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 12:43:38] 2025-10-12 16:42:56,534 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-12 12:43:38] 2025-10-12 16:42:56,537 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1695.875
[2025-10-12 12:43:38] 2025-10-12 16:42:56,540 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6839869891/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 12:43:38] 2025-10-12 16:42:56,541 | INFO     | extracted standard info from prmon json
[2025-10-12 12:43:38] 2025-10-12 16:42:56,541 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 12:43:38] 2025-10-12 16:42:56,541 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 12:43:38] 2025-10-12 16:42:56,542 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 12:43:38] 2025-10-12 16:42:56,542 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 12:43:38] 2025-10-12 16:42:56,544 | INFO     | fitting pss+swap vs Time
[2025-10-12 12:43:38] 2025-10-12 16:42:56,545 | INFO     | sum of square deviations: 509440249.5
[2025-10-12 12:43:38] 2025-10-12 16:42:56,545 | INFO     | sum of deviations: 1284288235.499999
[2025-10-12 12:43:38] 2025-10-12 16:42:56,546 | INFO     | mean x: 1760283739.5
[2025-10-12 12:43:38] 2025-10-12 16:42:56,546 | INFO     | mean y: 2539948.6016949154
[2025-10-12 12:43:38] 2025-10-12 16:42:56,546 | INFO     | -- intersect: -4435098616.471665
[2025-10-12 12:43:38] 2025-10-12 16:42:56,546 | INFO     | intersect: -4435098616.471665
[2025-10-12 12:43:38] 2025-10-12 16:42:56,546 | INFO     | chi2: 1.5809114455772557
[2025-10-12 12:43:38] 2025-10-12 16:42:56,547 | INFO     | sum of square deviations: 447383272.0
[2025-10-12 12:43:38] 2025-10-12 16:42:56,547 | INFO     | sum of deviations: 1526027057.0000014
[2025-10-12 12:43:38] 2025-10-12 16:42:56,547 | INFO     | mean x: 1760283587.0
[2025-10-12 12:43:38] 2025-10-12 16:42:56,547 | INFO     | mean y: 2540544.610619469
[2025-10-12 12:43:38] 2025-10-12 16:42:56,548 | INFO     | -- intersect: -6001797457.895241
[2025-10-12 12:43:38] 2025-10-12 16:42:56,548 | INFO     | intersect: -6001797457.895241
[2025-10-12 12:43:38] 2025-10-12 16:42:56,548 | INFO     | chi2: 1.5827645038036127
[2025-10-12 12:43:38] 2025-10-12 16:42:56,548 | INFO     | current chi2=1.5827645038036127 (change=-0.11721454933741238 %)
[2025-10-12 12:43:38] 2025-10-12 16:42:56,548 | INFO     | right removable region: 112
[2025-10-12 12:43:38] 2025-10-12 16:42:56,548 | INFO     | sum of square deviations: 447383272.0
[2025-10-12 12:43:38] 2025-10-12 16:42:56,549 | INFO     | sum of deviations: -16324332366.0
[2025-10-12 12:43:38] 2025-10-12 16:42:56,549 | INFO     | mean x: 1760283892.0
[2025-10-12 12:43:38] 2025-10-12 16:42:56,549 | INFO     | mean y: 2582368.946902655
[2025-10-12 12:43:38] 2025-10-12 16:42:56,549 | INFO     | -- intersect: 64232653339.33412
[2025-10-12 12:43:38] 2025-10-12 16:42:56,550 | INFO     | intersect: 64232653339.33412
[2025-10-12 12:43:38] 2025-10-12 16:42:56,550 | INFO     | chi2: 0.11714536756407734
[2025-10-12 12:43:38] 2025-10-12 16:42:56,550 | INFO     | current chi2=0.11714536756407734 (change=92.59001078828277 %)
[2025-10-12 12:43:38] 2025-10-12 16:42:56,550 | INFO     | sum of square deviations: 390582207.0
[2025-10-12 12:43:38] 2025-10-12 16:42:56,551 | INFO     | sum of deviations: -15055768710.5
[2025-10-12 12:43:38] 2025-10-12 16:42:56,551 | INFO     | mean x: 1760284044.5
[2025-10-12 12:43:38] 2025-10-12 16:42:56,551 | INFO     | mean y: 2578848.8981481483
[2025-10-12 12:43:38] 2025-10-12 16:42:56,551 | INFO     | -- intersect: 67856231585.248955
[2025-10-12 12:43:38] 2025-10-12 16:42:56,551 | INFO     | intersect: 67856231585.248955
[2025-10-12 12:43:38] 2025-10-12 16:42:56,552 | INFO     | chi2: 0.10624651373716709
[2025-10-12 12:43:38] 2025-10-12 16:42:56,552 | INFO     | current chi2=0.10624651373716709 (change=9.30370022608763 %)
[2025-10-12 12:43:38] 2025-10-12 16:42:56,552 | INFO     | left removable region: 20
[2025-10-12 12:43:38] 2025-10-12 16:42:56,552 | INFO     | sum of square deviations: 241429643.0
[2025-10-12 12:43:38] 2025-10-12 16:42:56,552 | INFO     | sum of deviations: -7698540288.499999
[2025-10-12 12:43:38] 2025-10-12 16:42:56,553 | INFO     | mean x: 1760284166.5
[2025-10-12 12:43:38] 2025-10-12 16:42:56,553 | INFO     | mean y: 2559779.1413043477
[2025-10-12 12:43:38] 2025-10-12 16:42:56,553 | INFO     | -- intersect: 56133275156.99112
[2025-10-12 12:43:38] 2025-10-12 16:42:56,553 | INFO     | intersect: 56133275156.99112
[2025-10-12 12:43:38] 2025-10-12 16:42:56,553 | INFO     | chi2: 0.08617718035538344
[2025-10-12 12:43:38] 2025-10-12 16:42:56,553 | INFO     | -- intersect: 56133275156.99112
[2025-10-12 12:43:38] 2025-10-12 16:42:56,554 | INFO     | current memory leak: -31.89 B/s (using 92 data points, chi2=0.09)
[2025-10-12 12:43:38] 2025-10-12 16:42:56,554 | INFO     | could have reported an average CPU frequency of 1955 MHz (7 samples)
[2025-10-12 12:43:38] 2025-10-12 16:42:56,554 | INFO     | ..............................
[2025-10-12 12:43:38] 2025-10-12 16:42:56,554 | INFO     | . Timing measurements:
[2025-10-12 12:43:38] 2025-10-12 16:42:56,554 | INFO     | . get job = 0 s
[2025-10-12 12:43:38] 2025-10-12 16:42:56,554 | INFO     | . initial setup = 2 s
[2025-10-12 12:43:38] 2025-10-12 16:42:56,555 | INFO     | . payload setup = 8 s
[2025-10-12 12:43:38] 2025-10-12 16:42:56,555 | INFO     | . stage-in = 0 s
[2025-10-12 12:43:38] 2025-10-12 16:42:56,555 | INFO     | . payload execution = 7194 s
[2025-10-12 12:43:38] 2025-10-12 16:42:56,555 | INFO     | . stage-out = 0 s
[2025-10-12 12:43:38] 2025-10-12 16:42:56,555 | INFO     | . log creation = 0 s
[2025-10-12 12:43:38] 2025-10-12 16:42:56,555 | INFO     | ..............................
[2025-10-12 12:43:38] 2025-10-12 16:42:56,653 | INFO     | 
[2025-10-12 12:43:38] 2025-10-12 16:42:56,653 | INFO     | job summary report
[2025-10-12 12:43:38] 2025-10-12 16:42:56,653 | INFO     | --------------------------------------------------
[2025-10-12 12:43:38] 2025-10-12 16:42:56,653 | INFO     | PanDA job id: 6839869891
[2025-10-12 12:43:38] 2025-10-12 16:42:56,653 | INFO     | task id: 46676269
[2025-10-12 12:43:38] 2025-10-12 16:42:56,654 | INFO     | errors: (none)
[2025-10-12 12:43:38] 2025-10-12 16:42:56,654 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 12:43:38] 2025-10-12 16:42:56,654 | INFO     | pilot state: finished 
[2025-10-12 12:43:38] 2025-10-12 16:42:56,654 | INFO     | transexitcode: 0
[2025-10-12 12:43:38] 2025-10-12 16:42:56,654 | INFO     | exeerrorcode: 0
[2025-10-12 12:43:38] 2025-10-12 16:42:56,654 | INFO     | exeerrordiag: 
[2025-10-12 12:43:38] 2025-10-12 16:42:56,654 | INFO     | exitcode: 0
[2025-10-12 12:43:38] 2025-10-12 16:42:56,654 | INFO     | exitmsg: OK
[2025-10-12 12:43:38] 2025-10-12 16:42:56,655 | INFO     | cpuconsumptiontime: 53601 s
[2025-10-12 12:43:38] 2025-10-12 16:42:56,655 | INFO     | nevents: 400
[2025-10-12 12:43:38] 2025-10-12 16:42:56,655 | INFO     | neventsw: 0
[2025-10-12 12:43:38] 2025-10-12 16:42:56,655 | INFO     | pid: 26672
[2025-10-12 12:43:38] 2025-10-12 16:42:56,655 | INFO     | pgrp: 26672
[2025-10-12 12:43:38] 2025-10-12 16:42:56,655 | INFO     | corecount: 8
[2025-10-12 12:43:38] 2025-10-12 16:42:56,655 | INFO     | event service: False
[2025-10-12 12:43:38] 2025-10-12 16:42:56,656 | INFO     | sizes: {0: 2348851, 6: 2349113, 11: 2349141, 7206: 2376420, 7207: 2385418, 7210: 2385474, 7219: 2385796}
[2025-10-12 12:43:38] 2025-10-12 16:42:56,656 | INFO     | --------------------------------------------------
[2025-10-12 12:43:38] 2025-10-12 16:42:56,656 | INFO     | 
[2025-10-12 12:43:38] 2025-10-12 16:42:56,656 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 12:43:38] 2025-10-12 16:42:56,685 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 12:43:38] 2025-10-12 16:42:56,685 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 12:43:38] 2025-10-12 16:42:56,685 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 12:43:38] 2025-10-12 16:42:56,686 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 12:43:38] 2025-10-12 16:42:56,686 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 12:43:38] 2025-10-12 16:42:56,686 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 12:43:38] 2025-10-12 16:42:56,686 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 12:43:38] 2025-10-12 16:42:56,686 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 12:43:38] 2025-10-12 16:42:56,687 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 12:43:38] 2025-10-12 16:42:56,687 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 12:43:38] 2025-10-12 16:42:56,687 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 12:43:38] 2025-10-12 16:42:56,687 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 12:43:38] 2025-10-12 16:42:56,687 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 12:43:38] 2025-10-12 16:42:56,687 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 12:43:38] 2025-10-12 16:42:56,688 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 12:43:38] 2025-10-12 16:42:56,688 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 12:43:38] 2025-10-12 16:42:56,688 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 12:43:38] 2025-10-12 16:42:56,688 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 12:43:38] 2025-10-12 16:42:56,688 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 12:43:38] 2025-10-12 16:42:56,689 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 12:43:38] 2025-10-12 16:42:56,689 | INFO     | job 6839869891 has completed (purged errors)
[2025-10-12 12:43:38] 2025-10-12 16:42:56,689 | INFO     | overall cleanup function is called
[2025-10-12 12:43:38] 2025-10-12 16:42:57,697 | INFO     | --- collectZombieJob: --- 10, [26672]
[2025-10-12 12:43:38] 2025-10-12 16:42:57,698 | INFO     | zombie collector waiting for pid 26672
[2025-10-12 12:43:38] 2025-10-12 16:42:57,704 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 12:43:38] 2025-10-12 16:42:57,704 | INFO     | collected zombie processes
[2025-10-12 12:43:38] 2025-10-12 16:42:57,704 | INFO     | will attempt to kill all subprocesses of pid=26672
[2025-10-12 12:43:38] 2025-10-12 16:42:57,795 | INFO     | process IDs to be killed: [26672] (in reverse order)
[2025-10-12 12:43:38] 2025-10-12 16:42:57,850 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 12:43:38] 2025-10-12 16:42:57,850 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 12:43:38] 2025-10-12 16:42:57,854 | INFO     | did not find any defunct processes belonging to 26672
[2025-10-12 12:43:38] 2025-10-12 16:42:57,857 | INFO     | did not find any defunct processes belonging to 26672
[2025-10-12 12:43:38] 2025-10-12 16:42:57,858 | INFO     | ready for new job
[2025-10-12 12:43:38] 2025-10-12 16:42:57,858 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 12:43:38] 2025-10-12 16:42:57,860 | INFO     | ***************************************
[2025-10-12 12:43:38] 2025-10-12 16:42:57,860 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 12:43:38] 2025-10-12 16:42:57,860 | INFO     | ***************************************
[2025-10-12 12:43:38] 2025-10-12 16:42:57,860 | INFO     | 
[2025-10-12 12:43:38] 2025-10-12 16:42:57,861 | INFO     | architecture information:
[2025-10-12 12:43:38] 2025-10-12 16:42:57,862 | INFO     | executing command: cat /etc/os-release
[2025-10-12 12:43:38] 2025-10-12 16:42:57,880 | INFO     | cat /etc/os-release:
[2025-10-12 12:43:38] NAME="CentOS Linux"
[2025-10-12 12:43:38] VERSION="7 (Core)"
[2025-10-12 12:43:38] ID="centos"
[2025-10-12 12:43:38] ID_LIKE="rhel fedora"
[2025-10-12 12:43:38] VERSION_ID="7"
[2025-10-12 12:43:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 12:43:38] ANSI_COLOR="0;31"
[2025-10-12 12:43:38] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 12:43:38] HOME_URL="https://www.centos.org/"
[2025-10-12 12:43:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 12:43:38] 
[2025-10-12 12:43:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 12:43:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 12:43:38] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 12:43:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 12:43:38] 
[2025-10-12 12:43:38] 2025-10-12 16:42:57,881 | INFO     | ***************************************
[2025-10-12 12:43:38] 2025-10-12 16:42:58,384 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 12:43:38] 2025-10-12 16:42:58,403 | INFO     | sufficient remaining disk space (18556649472 B)
[2025-10-12 12:43:38] 2025-10-12 16:42:58,403 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 12:43:38] 2025-10-12 16:42:58,403 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 12:43:38] 2025-10-12 16:42:58,404 | INFO     | update_server=False
[2025-10-12 12:43:38] 2025-10-12 16:42:58,404 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 12:43:38] 2025-10-12 16:42:58,404 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 12:43:38] 2025-10-12 16:42:58,404 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 12:43:38] 2025-10-12 16:42:58,480 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 12:43:38] 2025-10-12 16:42:59,161 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 12:43:38] 2025-10-12 16:42:59,161 | INFO     | aborting loop
[2025-10-12 12:43:38] 2025-10-12 16:42:59,295 | INFO     | all data control threads have been joined
[2025-10-12 12:43:38] 2025-10-12 16:42:59,310 | INFO     | all job control threads have been joined
[2025-10-12 12:43:38] 2025-10-12 16:42:59,409 | INFO     | [job] retrieve thread has finished
[2025-10-12 12:43:38] 2025-10-12 16:42:59,411 | INFO     | [job] queue monitor thread has finished
[2025-10-12 12:43:38] 2025-10-12 16:42:59,491 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 12:43:38] 2025-10-12 16:42:59,532 | INFO     | [payload] validate_post thread has finished
[2025-10-12 12:43:38] 2025-10-12 16:42:59,688 | INFO     | all payload control threads have been joined
[2025-10-12 12:43:38] 2025-10-12 16:42:59,999 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 12:43:38] 2025-10-12 16:43:00,167 | INFO     | [job] job monitor thread has finished
[2025-10-12 12:43:38] 2025-10-12 16:43:00,287 | INFO     | [job] validate thread has finished
[2025-10-12 12:43:38] 2025-10-12 16:43:00,296 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 12:43:38] 2025-10-12 16:43:00,296 | INFO     | [data] control thread has finished
[2025-10-12 12:43:38] 2025-10-12 16:43:00,316 | INFO     | [job] control thread has finished
[2025-10-12 12:43:38] 2025-10-12 16:43:00,410 | INFO     | [data] copytool_out thread has finished
[2025-10-12 12:43:38] 2025-10-12 16:43:00,547 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 12:43:38] 2025-10-12 16:43:00,674 | INFO     | [data] copytool_in thread has finished
[2025-10-12 12:43:38] 2025-10-12 16:43:00,693 | INFO     | [payload] control thread has finished
[2025-10-12 12:43:38] 2025-10-12 16:43:00,702 | INFO     | [payload] failed_post thread has finished
[2025-10-12 12:43:38] 2025-10-12 16:43:02,486 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 12:43:38] 2025-10-12 16:43:28,848 | INFO     | PID=20312 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 12:43:38] 2025-10-12 16:43:28,850 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 12:43:38] 2025-10-12 16:43:28,850 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 12:43:38] 2025-10-12 16:43:28,850 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 12:43:38] 2025-10-12 16:43:31,379 | INFO     | [monitor] cgroup control has ended
[2025-10-12 12:43:38] 2025-10-12 16:43:33,364 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139798710466368)>', '<ExcThread(monitor, started 139797746145024)>']
[2025-10-12 12:43:38] 2025-10-12 16:43:33,876 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 12:43:38] 2025-10-12 16:43:33,876 | INFO     | [monitor] control thread has ended
[2025-10-12 12:43:38] 2025-10-12 16:43:38,385 | INFO     | all workflow threads have been joined
[2025-10-12 12:43:38] 2025-10-12 16:43:38,385 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 12:43:38] 2025-10-12 16:43:38,386 | INFO     | traces error code: 0
[2025-10-12 12:43:38] 2025-10-12 16:43:38,386 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 12:43:38] 2025-10-12 16:43:38,512 [wrapper] ==== pilot stdout END ====
[2025-10-12 12:43:38] 2025-10-12 16:43:38,517 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 12:43:38] 2025-10-12 16:43:38,522 [wrapper] pilotpid: 20312
[2025-10-12 12:43:38] 2025-10-12 16:43:38,527 [wrapper] Pilot exit status: 0
[2025-10-12 12:43:38] 2025-10-12 16:43:38,546 [wrapper] pandaids: 6839869891
[2025-10-12 12:43:38] 2025-10-12 16:43:38,598 [wrapper] cleanup supervisor_pilot 24727 20313
[2025-10-12 12:43:38] 2025-10-12 16:43:38,603 [wrapper] Test setup, not cleaning
[2025-10-12 12:43:38] 2025-10-12 16:43:38,608 [wrapper] apfmon messages muted
[2025-10-12 12:43:38] 2025-10-12 16:43:38,613 [wrapper] ==== wrapper stdout END ====
[2025-10-12 12:43:38] 2025-10-12 16:43:38,617 [wrapper] ==== wrapper stderr END ====
[2025-10-12 12:43:38]  *** Error codes and diagnostics ***
[2025-10-12 12:43:38]     "exeErrorCode": 0,
[2025-10-12 12:43:38]     "exeErrorDiag": "",
[2025-10-12 12:43:38]     "pilotErrorCode": 0,
[2025-10-12 12:43:38]     "pilotErrorDiag": "",
[2025-10-12 12:43:38]  *** Listing of results directory ***
[2025-10-12 12:43:38] total 407268
[2025-10-12 12:43:38] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 06:57 pilot3.tar.gz
[2025-10-12 12:43:38] -rwx------ 1 boincer umatlas     36292 Oct 12 07:11 runpilot2-wrapper.sh
[2025-10-12 12:43:38] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 07:11 queuedata.json
[2025-10-12 12:43:38] -rw-r--r-- 1 boincer umatlas       100 Oct 12 10:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 12:43:38] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 10:41 run_atlas
[2025-10-12 12:43:38] -rw-r--r-- 1 boincer umatlas       105 Oct 12 10:41 job.xml
[2025-10-12 12:43:38] -rw-r--r-- 2 boincer umatlas 223169534 Oct 12 10:42 EVNT.46676267._003667.pool.root.1
[2025-10-12 12:43:38] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 10:42 start_atlas.sh
[2025-10-12 12:43:38] drwxrwx--x 2 boincer umatlas      4096 Oct 12 10:42 shared
[2025-10-12 12:43:38] -rw-r--r-- 2 boincer umatlas    569673 Oct 12 10:42 input.tar.gz
[2025-10-12 12:43:38] -rw-r--r-- 1 boincer umatlas         0 Oct 12 10:42 boinc_lockfile
[2025-10-12 12:43:38] -rw-r--r-- 1 boincer umatlas      2547 Oct 12 10:42 pandaJob.out
[2025-10-12 12:43:38] -rw------- 1 boincer umatlas    975528 Oct 12 10:42 agis_schedconf.cvmfs.json
[2025-10-12 12:43:38] -rw------- 1 boincer umatlas   1560580 Oct 12 10:42 agis_ddmendpoints.agis.ALL.json
[2025-10-12 12:43:38] drwx------ 5 boincer umatlas      4096 Oct 12 10:42 pilot3
[2025-10-12 12:43:38] -rw-r--r-- 1 boincer umatlas      5909 Oct 12 12:39 init_data.xml
[2025-10-12 12:43:38] -rw------- 1 boincer umatlas 187229362 Oct 12 12:42 HITS.46676269._076865.pool.root.1
[2025-10-12 12:43:38] -rw-r--r-- 1 boincer umatlas       529 Oct 12 12:42 boinc_task_state.xml
[2025-10-12 12:43:38] -rw------- 1 boincer umatlas      1051 Oct 12 12:42 memory_monitor_summary.json
[2025-10-12 12:43:38] -rw------- 1 boincer umatlas    349856 Oct 12 12:42 log.46676269._076865.job.log.tgz.1
[2025-10-12 12:43:38] -rw------- 1 boincer umatlas      7849 Oct 12 12:42 heartbeat.json
[2025-10-12 12:43:38] -rw------- 1 boincer umatlas        95 Oct 12 12:43 pilot_heartbeat.json
[2025-10-12 12:43:38] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 12:43 boinc_mmap_file
[2025-10-12 12:43:38] -rw-r--r-- 1 boincer umatlas        27 Oct 12 12:43 wrapper_checkpoint.txt
[2025-10-12 12:43:38] -rw------- 1 boincer umatlas      4746 Oct 12 12:43 pilotlog.txt
[2025-10-12 12:43:38] -rw------- 1 boincer umatlas   1018411 Oct 12 12:43 log.46676269._076865.job.log.1
[2025-10-12 12:43:38] -rw------- 1 boincer umatlas       357 Oct 12 12:43 output.list
[2025-10-12 12:43:38] -rw-r--r-- 1 boincer umatlas       620 Oct 12 12:43 runtime_log
[2025-10-12 12:43:38] -rw------- 1 boincer umatlas   1392640 Oct 12 12:43 result.tar.gz
[2025-10-12 12:43:38] -rw------- 1 boincer umatlas       659 Oct 12 12:43 YuCLDm198R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmFbjNDmcnvGrm.diag
[2025-10-12 12:43:38] -rw-r--r-- 1 boincer umatlas      8703 Oct 12 12:43 runtime_log.err
[2025-10-12 12:43:38] -rw-r--r-- 1 boincer umatlas     21092 Oct 12 12:43 stderr.txt
[2025-10-12 12:43:38] HITS file was successfully produced:
[2025-10-12 12:43:38] -rw------- 1 boincer umatlas 187229362 Oct 12 12:42 shared/HITS.pool.root.1
[2025-10-12 12:43:38]  *** Contents of shared directory: ***
[2025-10-12 12:43:38] total 402724
[2025-10-12 12:43:38] -rw-r--r-- 2 boincer umatlas 223169534 Oct 12 10:42 ATLAS.root_0
[2025-10-12 12:43:38] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 10:42 start_atlas.sh
[2025-10-12 12:43:38] -rw-r--r-- 2 boincer umatlas    569673 Oct 12 10:42 input.tar.gz
[2025-10-12 12:43:38] -rw------- 1 boincer umatlas 187229362 Oct 12 12:42 HITS.pool.root.1
[2025-10-12 12:43:38] -rw------- 1 boincer umatlas   1392640 Oct 12 12:43 result.tar.gz
12:43:39 (16595): run_atlas exited; CPU time 53596.589421
12:43:39 (16595): called boinc_finish(0)

</stderr_txt>
]]>

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