Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
10:49:06 (1078534): wrapper (7.7.26015): starting
10:49:06 (1078534): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 10:49:06] Arguments: --nthreads 12
[2025-10-12 10:49:06] Threads: 12
[2025-10-12 10:49:06] Checking for CVMFS
[2025-10-12 10:49:06] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 10:49:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 10:49:06] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 10:49:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 10:49:07] 2.13.2.0 14624 662 51672 151623 2 188 2516281 4096001 922 130560 0 2655176 99.998 26860 1527 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-12 10:49:07] CVMFS is ok
[2025-10-12 10:49:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 10:49:07] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-12 10:49:07] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-12 10:49:07] Further information can be found at the LHC@home message board.
[2025-10-12 10:49:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 10:49:07] Checking for apptainer binary...
[2025-10-12 10:49:07] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 10:49:07] Running /usr/bin/apptainer --version
[2025-10-12 10:49:07] apptainer version 1.4.3
[2025-10-12 10:49:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 10:49:07] zhiwei-Z790-Riptide-WiFi
[2025-10-12 10:49:07] apptainer works
[2025-10-12 10:49:07] Set ATHENA_PROC_NUMBER=12
[2025-10-12 10:49:07] Set ATHENA_CORE_NUMBER=12
[2025-10-12 10:49:07] Starting ATLAS job with PandaID=6839868702
[2025-10-12 10:49:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 11:14:34]  *** The last 200 lines of the pilot log: ***
[2025-10-12 11:14:34]  mtime=0
[2025-10-12 11:14:34]  protocol_id=None
[2025-10-12 11:14:34]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-12 11:14:34]  replicas=None
[2025-10-12 11:14:34]  scope=mc23_13p6TeV
[2025-10-12 11:14:34]  status=None
[2025-10-12 11:14:34]  status_code=0
[2025-10-12 11:14:34]  storage_token=
[2025-10-12 11:14:34]  surl=/var/lib/boinc/slots/0/PanDA_Pilot-6839868702/log.46676269._076651.job.log.tgz.1
[2025-10-12 11:14:34]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/41/b1/log.46676269._076651.job.log.tgz.1
[2025-10-12 11:14:34]  workdir=None
[2025-10-12 11:14:34] ]
[2025-10-12 11:14:34] 2025-10-12 15:13:57,403 | INFO     | transferring file log.46676269._076651.job.log.tgz.1 from /var/lib/boinc/slots/0/PanDA_Pilot-6839868702/log.46676269._076651.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-10-12 11:14:34] 2025-10-12 15:13:57,403 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/0/PanDA_Pilot-6839868702/log.46676269._076651.job.log.tgz.1 /var/lib/boinc/slots/0/log.46676269._076651.job
[2025-10-12 11:14:34] 2025-10-12 15:13:57,413 | INFO     | adding to output.list: log.46676269._076651.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/41/b1/log.46676269._076651.job.log.tg
[2025-10-12 11:14:34] 2025-10-12 15:13:57,413 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 11:14:34] 2025-10-12 15:13:57,414 | INFO     | summary of transferred files:
[2025-10-12 11:14:34] 2025-10-12 15:13:57,414 | INFO     |  -- lfn=log.46676269._076651.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 11:14:34] 2025-10-12 15:13:57,414 | INFO     | stage-out finished correctly
[2025-10-12 11:14:34] 2025-10-12 15:13:58,753 | INFO     | time since job start (1486s) is within the limit (172800.0s)
[2025-10-12 11:14:34] 2025-10-12 15:13:58,986 | INFO     | monitor loop #117: job 0:6839868702 is in state 'finished'
[2025-10-12 11:14:34] 2025-10-12 15:13:58,986 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 11:14:34] 2025-10-12 15:13:59,874 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 11:14:34] 2025-10-12 15:14:00,075 | INFO     | job 6839868702 has state=finished
[2025-10-12 11:14:34] 2025-10-12 15:14:00,075 | INFO     | preparing for final server update for job 6839868702 in state='finished'
[2025-10-12 11:14:34] 2025-10-12 15:14:00,075 | INFO     | this job has now completed (state=finished)
[2025-10-12 11:14:34] 2025-10-12 15:14:00,075 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 11:14:34] 2025-10-12 15:14:00,075 | INFO     | log transfer has been attempted: DONE
[2025-10-12 11:14:34] 2025-10-12 15:14:00,075 | INFO     | job 6839868702 has finished - writing final server update
[2025-10-12 11:14:34] 2025-10-12 15:14:00,076 | INFO     | total number of processed events: 400 (read)
[2025-10-12 11:14:34] 2025-10-12 15:14:00,077 | INFO     | executing command: lscpu
[2025-10-12 11:14:34] 2025-10-12 15:14:00,091 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 11:14:34] 2025-10-12 15:14:00,758 | INFO     | time since job start (1488s) is within the limit (172800.0s)
[2025-10-12 11:14:34] 2025-10-12 15:14:01,489 | INFO     | monitor loop #118: job 0:6839868702 is in state 'finished'
[2025-10-12 11:14:34] 2025-10-12 15:14:01,489 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 11:14:34] 2025-10-12 15:14:02,169 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-12 11:14:34] 2025-10-12 15:14:02,172 | INFO     | found 24 cores (24 cores per socket, 1 socket) , CPU MHz: 3109.5377500000004
[2025-10-12 11:14:34] 2025-10-12 15:14:02,174 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6839868702/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 11:14:34] 2025-10-12 15:14:02,175 | INFO     | extracted standard info from prmon json
[2025-10-12 11:14:34] 2025-10-12 15:14:02,175 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 11:14:34] 2025-10-12 15:14:02,175 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 11:14:34] 2025-10-12 15:14:02,175 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 11:14:34] 2025-10-12 15:14:02,175 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 11:14:34] 2025-10-12 15:14:02,175 | INFO     | fitting pss+swap vs Time
[2025-10-12 11:14:34] 2025-10-12 15:14:02,175 | INFO     | sum of square deviations: 1802824.5
[2025-10-12 11:14:34] 2025-10-12 15:14:02,175 | INFO     | sum of deviations: 159701538.00000003
[2025-10-12 11:14:34] 2025-10-12 15:14:02,175 | INFO     | mean x: 1760281391.5
[2025-10-12 11:14:34] 2025-10-12 15:14:02,176 | INFO     | mean y: 2915361.222222222
[2025-10-12 11:14:34] 2025-10-12 15:14:02,176 | INFO     | -- intersect: -155929980788.86346
[2025-10-12 11:14:34] 2025-10-12 15:14:02,176 | INFO     | intersect: -155929980788.86346
[2025-10-12 11:14:34] 2025-10-12 15:14:02,176 | INFO     | chi2: 0.00599881753956779
[2025-10-12 11:14:34] 2025-10-12 15:14:02,176 | INFO     | -- intersect: -155929980788.86346
[2025-10-12 11:14:34] 2025-10-12 15:14:02,176 | INFO     | current memory leak: 88.58 B/s (using 18 data points, chi2=0.01)
[2025-10-12 11:14:34] 2025-10-12 15:14:02,176 | INFO     | could have reported an average CPU frequency of 3652 MHz (4 samples)
[2025-10-12 11:14:34] 2025-10-12 15:14:02,176 | INFO     | ..............................
[2025-10-12 11:14:34] 2025-10-12 15:14:02,176 | INFO     | . Timing measurements:
[2025-10-12 11:14:34] 2025-10-12 15:14:02,176 | INFO     | . get job = 0 s
[2025-10-12 11:14:34] 2025-10-12 15:14:02,176 | INFO     | . initial setup = 2 s
[2025-10-12 11:14:34] 2025-10-12 15:14:02,176 | INFO     | . payload setup = 1 s
[2025-10-12 11:14:34] 2025-10-12 15:14:02,176 | INFO     | . stage-in = 0 s
[2025-10-12 11:14:34] 2025-10-12 15:14:02,176 | INFO     | . payload execution = 1467 s
[2025-10-12 11:14:34] 2025-10-12 15:14:02,176 | INFO     | . stage-out = 0 s
[2025-10-12 11:14:34] 2025-10-12 15:14:02,176 | INFO     | . log creation = 0 s
[2025-10-12 11:14:34] 2025-10-12 15:14:02,176 | INFO     | ..............................
[2025-10-12 11:14:34] 2025-10-12 15:14:02,473 | INFO     | 
[2025-10-12 11:14:34] 2025-10-12 15:14:02,473 | INFO     | job summary report
[2025-10-12 11:14:34] 2025-10-12 15:14:02,473 | INFO     | --------------------------------------------------
[2025-10-12 11:14:34] 2025-10-12 15:14:02,473 | INFO     | PanDA job id: 6839868702
[2025-10-12 11:14:34] 2025-10-12 15:14:02,473 | INFO     | task id: 46676269
[2025-10-12 11:14:34] 2025-10-12 15:14:02,473 | INFO     | errors: (none)
[2025-10-12 11:14:34] 2025-10-12 15:14:02,473 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 11:14:34] 2025-10-12 15:14:02,473 | INFO     | pilot state: finished 
[2025-10-12 11:14:34] 2025-10-12 15:14:02,473 | INFO     | transexitcode: 0
[2025-10-12 11:14:34] 2025-10-12 15:14:02,473 | INFO     | exeerrorcode: 0
[2025-10-12 11:14:34] 2025-10-12 15:14:02,473 | INFO     | exeerrordiag: 
[2025-10-12 11:14:34] 2025-10-12 15:14:02,473 | INFO     | exitcode: 0
[2025-10-12 11:14:34] 2025-10-12 15:14:02,473 | INFO     | exitmsg: OK
[2025-10-12 11:14:34] 2025-10-12 15:14:02,473 | INFO     | cpuconsumptiontime: 15318 s
[2025-10-12 11:14:34] 2025-10-12 15:14:02,473 | INFO     | nevents: 400
[2025-10-12 11:14:34] 2025-10-12 15:14:02,473 | INFO     | neventsw: 0
[2025-10-12 11:14:34] 2025-10-12 15:14:02,473 | INFO     | pid: 1089029
[2025-10-12 11:14:34] 2025-10-12 15:14:02,473 | INFO     | pgrp: 1089029
[2025-10-12 11:14:34] 2025-10-12 15:14:02,474 | INFO     | corecount: 12
[2025-10-12 11:14:34] 2025-10-12 15:14:02,474 | INFO     | event service: False
[2025-10-12 11:14:34] 2025-10-12 15:14:02,474 | INFO     | sizes: {0: 2348806, 1: 2349068, 11: 2349096, 1473: 2382809, 1476: 2382809, 1478: 2383003}
[2025-10-12 11:14:34] 2025-10-12 15:14:02,474 | INFO     | --------------------------------------------------
[2025-10-12 11:14:34] 2025-10-12 15:14:02,474 | INFO     | 
[2025-10-12 11:14:34] 2025-10-12 15:14:02,474 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-10-12 11:14:34] 2025-10-12 15:14:02,486 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 11:14:34] 2025-10-12 15:14:02,486 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 11:14:34] 2025-10-12 15:14:02,486 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 11:14:34] 2025-10-12 15:14:02,486 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 11:14:34] 2025-10-12 15:14:02,486 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 11:14:34] 2025-10-12 15:14:02,486 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 11:14:34] 2025-10-12 15:14:02,486 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 11:14:34] 2025-10-12 15:14:02,486 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 11:14:34] 2025-10-12 15:14:02,486 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 11:14:34] 2025-10-12 15:14:02,486 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 11:14:34] 2025-10-12 15:14:02,486 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 11:14:34] 2025-10-12 15:14:02,486 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 11:14:34] 2025-10-12 15:14:02,486 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 11:14:34] 2025-10-12 15:14:02,486 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 11:14:34] 2025-10-12 15:14:02,486 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 11:14:34] 2025-10-12 15:14:02,486 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 11:14:34] 2025-10-12 15:14:02,487 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 11:14:34] 2025-10-12 15:14:02,487 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 11:14:34] 2025-10-12 15:14:02,487 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 11:14:34] 2025-10-12 15:14:02,487 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 11:14:34] 2025-10-12 15:14:02,487 | INFO     | job 6839868702 has completed (purged errors)
[2025-10-12 11:14:34] 2025-10-12 15:14:02,487 | INFO     | overall cleanup function is called
[2025-10-12 11:14:34] 2025-10-12 15:14:03,493 | INFO     | --- collectZombieJob: --- 10, [1089029]
[2025-10-12 11:14:34] 2025-10-12 15:14:03,493 | INFO     | zombie collector waiting for pid 1089029
[2025-10-12 11:14:34] 2025-10-12 15:14:03,493 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 11:14:34] 2025-10-12 15:14:03,493 | INFO     | collected zombie processes
[2025-10-12 11:14:34] 2025-10-12 15:14:03,493 | INFO     | will attempt to kill all subprocesses of pid=1089029
[2025-10-12 11:14:34] 2025-10-12 15:14:03,558 | INFO     | process IDs to be killed: [1089029] (in reverse order)
[2025-10-12 11:14:34] 2025-10-12 15:14:03,582 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 11:14:34] 2025-10-12 15:14:03,583 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 11:14:34] 2025-10-12 15:14:03,585 | INFO     | did not find any defunct processes belonging to 1089029
[2025-10-12 11:14:34] 2025-10-12 15:14:03,587 | INFO     | did not find any defunct processes belonging to 1089029
[2025-10-12 11:14:34] 2025-10-12 15:14:03,587 | INFO     | ready for new job
[2025-10-12 11:14:34] 2025-10-12 15:14:03,587 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 11:14:34] 2025-10-12 15:14:03,588 | INFO     | ***************************************
[2025-10-12 11:14:34] 2025-10-12 15:14:03,588 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 11:14:34] 2025-10-12 15:14:03,588 | INFO     | ***************************************
[2025-10-12 11:14:34] 2025-10-12 15:14:03,588 | INFO     | 
[2025-10-12 11:14:34] 2025-10-12 15:14:03,588 | INFO     | architecture information:
[2025-10-12 11:14:34] 2025-10-12 15:14:03,589 | INFO     | executing command: cat /etc/os-release
[2025-10-12 11:14:34] 2025-10-12 15:14:03,595 | INFO     | cat /etc/os-release:
[2025-10-12 11:14:34] NAME="CentOS Linux"
[2025-10-12 11:14:34] VERSION="7 (Core)"
[2025-10-12 11:14:34] ID="centos"
[2025-10-12 11:14:34] ID_LIKE="rhel fedora"
[2025-10-12 11:14:34] VERSION_ID="7"
[2025-10-12 11:14:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 11:14:34] ANSI_COLOR="0;31"
[2025-10-12 11:14:34] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 11:14:34] HOME_URL="https://www.centos.org/"
[2025-10-12 11:14:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 11:14:34] 
[2025-10-12 11:14:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 11:14:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 11:14:34] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 11:14:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 11:14:34] 
[2025-10-12 11:14:34] 2025-10-12 15:14:03,595 | INFO     | ***************************************
[2025-10-12 11:14:34] 2025-10-12 15:14:04,098 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-10-12 11:14:34] 2025-10-12 15:14:04,106 | INFO     | sufficient remaining disk space (1819438743552 B)
[2025-10-12 11:14:34] 2025-10-12 15:14:04,106 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 11:14:34] 2025-10-12 15:14:04,106 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 11:14:34] 2025-10-12 15:14:04,106 | INFO     | update_server=False
[2025-10-12 11:14:34] 2025-10-12 15:14:04,106 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 11:14:34] 2025-10-12 15:14:04,107 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 11:14:34] 2025-10-12 15:14:04,333 | INFO     | all data control threads have been joined
[2025-10-12 11:14:34] 2025-10-12 15:14:04,617 | INFO     | all job control threads have been joined
[2025-10-12 11:14:34] 2025-10-12 15:14:04,878 | INFO     | all payload control threads have been joined
[2025-10-12 11:14:34] 2025-10-12 15:14:04,997 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 11:14:34] 2025-10-12 15:14:04,997 | INFO     | aborting loop
[2025-10-12 11:14:34] 2025-10-12 15:14:05,112 | INFO     | [job] retrieve thread has finished
[2025-10-12 11:14:34] 2025-10-12 15:14:05,112 | INFO     | [job] queue monitor thread has finished
[2025-10-12 11:14:34] 2025-10-12 15:14:05,116 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 11:14:34] 2025-10-12 15:14:05,137 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 11:14:34] 2025-10-12 15:14:05,339 | INFO     | [data] control thread has finished
[2025-10-12 11:14:34] 2025-10-12 15:14:05,459 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 11:14:34] 2025-10-12 15:14:05,549 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 11:14:34] 2025-10-12 15:14:05,622 | INFO     | [job] control thread has finished
[2025-10-12 11:14:34] 2025-10-12 15:14:05,883 | INFO     | [payload] control thread has finished
[2025-10-12 11:14:34] 2025-10-12 15:14:05,907 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 11:14:34] 2025-10-12 15:14:06,002 | INFO     | [job] job monitor thread has finished
[2025-10-12 11:14:34] 2025-10-12 15:14:06,082 | INFO     | [payload] validate_post thread has finished
[2025-10-12 11:14:34] 2025-10-12 15:14:06,508 | INFO     | [job] validate thread has finished
[2025-10-12 11:14:34] 2025-10-12 15:14:06,508 | INFO     | [payload] failed_post thread has finished
[2025-10-12 11:14:34] 2025-10-12 15:14:06,519 | INFO     | [data] copytool_in thread has finished
[2025-10-12 11:14:34] 2025-10-12 15:14:07,465 | INFO     | [data] copytool_out thread has finished
[2025-10-12 11:14:34] 2025-10-12 15:14:09,912 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 11:14:34] 2025-10-12 15:14:13,611 | INFO     | [monitor] cgroup control has ended
[2025-10-12 11:14:34] 2025-10-12 15:14:14,507 | INFO     | job.realtimelogging is not enabled
[2025-10-12 11:14:34] 2025-10-12 15:14:15,512 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 11:14:34] 2025-10-12 15:14:17,293 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140455268128576)>', '<ExcThread(monitor, started 140454909679360)>']
[2025-10-12 11:14:34] 2025-10-12 15:14:22,318 | INFO     | all workflow threads have been joined
[2025-10-12 11:14:34] 2025-10-12 15:14:22,318 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 11:14:34] 2025-10-12 15:14:22,318 | INFO     | traces error code: 0
[2025-10-12 11:14:34] 2025-10-12 15:14:22,319 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 11:14:34] 2025-10-12 15:14:33,923 | INFO     | PID=1082384 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 11:14:34] 2025-10-12 15:14:33,924 | INFO     | .. there are 2 such processes running
[2025-10-12 11:14:34] 2025-10-12 15:14:33,925 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 11:14:34] 2025-10-12 15:14:33,925 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 11:14:34] 2025-10-12 15:14:33,925 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 11:14:34] 2025-10-12 15:14:33,925 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 11:14:34] 2025-10-12 15:14:33,925 | INFO     | [monitor] control thread has ended
[2025-10-12 11:14:34] 2025-10-12 15:14:33,967 [wrapper] ==== pilot stdout END ====
[2025-10-12 11:14:34] 2025-10-12 15:14:33,969 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 11:14:34] 2025-10-12 15:14:33,970 [wrapper] pilotpid: 1082384
[2025-10-12 11:14:34] 2025-10-12 15:14:33,971 [wrapper] Pilot exit status: 0
[2025-10-12 11:14:34] 2025-10-12 15:14:33,974 [wrapper] pandaids: 6839868702
[2025-10-12 11:14:34] 2025-10-12 15:14:33,989 [wrapper] cleanup supervisor_pilot 1102035 1082385
[2025-10-12 11:14:34] 2025-10-12 15:14:33,990 [wrapper] Test setup, not cleaning
[2025-10-12 11:14:34] 2025-10-12 15:14:33,991 [wrapper] apfmon messages muted
[2025-10-12 11:14:34] 2025-10-12 15:14:33,992 [wrapper] ==== wrapper stdout END ====
[2025-10-12 11:14:34] 2025-10-12 15:14:33,993 [wrapper] ==== wrapper stderr END ====
[2025-10-12 11:14:34]  *** Error codes and diagnostics ***
[2025-10-12 11:14:34]     "exeErrorCode": 0,
[2025-10-12 11:14:34]     "exeErrorDiag": "",
[2025-10-12 11:14:34]     "pilotErrorCode": 0,
[2025-10-12 11:14:34]     "pilotErrorDiag": "",
[2025-10-12 11:14:34]  *** Listing of results directory ***
[2025-10-12 11:14:34] total 413020
[2025-10-12 11:14:34] -rw-r--r-- 1 boinc boinc    557409 Oct 12 06:57 pilot3.tar.gz
[2025-10-12 11:14:34] -rwx------ 1 boinc boinc     36292 Oct 12 07:02 runpilot2-wrapper.sh
[2025-10-12 11:14:34] -rw-r--r-- 1 boinc boinc      5112 Oct 12 07:02 queuedata.json
[2025-10-12 11:14:34] -rw-r--r-- 1 boinc boinc       100 Oct 12 10:49 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 11:14:34] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 10:49 run_atlas
[2025-10-12 11:14:34] -rw-r--r-- 1 boinc boinc       105 Oct 12 10:49 job.xml
[2025-10-12 11:14:34] -rw-r--r-- 2 boinc boinc 222792071 Oct 12 10:49 EVNT.46676267._003656.pool.root.1
[2025-10-12 11:14:34] -rw-r--r-- 2 boinc boinc    569673 Oct 12 10:49 input.tar.gz
[2025-10-12 11:14:34] -rw-r--r-- 2 boinc boinc     15120 Oct 12 10:49 start_atlas.sh
[2025-10-12 11:14:34] drwxrwx--x 2 boinc boinc      4096 Oct 12 10:49 shared
[2025-10-12 11:14:34] -rw-r--r-- 1 boinc boinc         0 Oct 12 10:49 boinc_setup_complete
[2025-10-12 11:14:34] -rw-r--r-- 1 boinc boinc     11824 Oct 12 10:49 init_data.xml
[2025-10-12 11:14:34] -rw-r--r-- 1 boinc boinc         0 Oct 12 10:49 boinc_lockfile
[2025-10-12 11:14:34] -rw-r--r-- 1 boinc boinc      2549 Oct 12 10:49 pandaJob.out
[2025-10-12 11:14:34] -rw------- 1 boinc boinc    975528 Oct 12 10:49 agis_schedconf.cvmfs.json
[2025-10-12 11:14:34] -rw------- 1 boinc boinc   1560580 Oct 12 10:49 agis_ddmendpoints.agis.ALL.json
[2025-10-12 11:14:34] drwx------ 5 boinc boinc      4096 Oct 12 10:49 pilot3
[2025-10-12 11:14:34] -rw------- 1 boinc boinc 195042878 Oct 12 11:13 HITS.46676269._076651.pool.root.1
[2025-10-12 11:14:34] -rw-r--r-- 1 boinc boinc       529 Oct 12 11:13 boinc_task_state.xml
[2025-10-12 11:14:34] -rw------- 1 boinc boinc      1013 Oct 12 11:13 memory_monitor_summary.json
[2025-10-12 11:14:34] -rw------- 1 boinc boinc    338686 Oct 12 11:13 log.46676269._076651.job.log.tgz.1
[2025-10-12 11:14:34] -rw------- 1 boinc boinc      7770 Oct 12 11:14 heartbeat.json
[2025-10-12 11:14:34] -rw-r--r-- 1 boinc boinc      8192 Oct 12 11:14 boinc_mmap_file
[2025-10-12 11:14:34] -rw-r--r-- 1 boinc boinc        27 Oct 12 11:14 wrapper_checkpoint.txt
[2025-10-12 11:14:34] -rw------- 1 boinc boinc       822 Oct 12 11:14 pilotlog.txt
[2025-10-12 11:14:34] -rw------- 1 boinc boinc        95 Oct 12 11:14 pilot_heartbeat.json
[2025-10-12 11:14:34] -rw------- 1 boinc boinc    258736 Oct 12 11:14 log.46676269._076651.job.log.1
[2025-10-12 11:14:34] -rw------- 1 boinc boinc       357 Oct 12 11:14 output.list
[2025-10-12 11:14:34] -rw-r--r-- 1 boinc boinc       620 Oct 12 11:14 runtime_log
[2025-10-12 11:14:34] -rw------- 1 boinc boinc    614400 Oct 12 11:14 result.tar.gz
[2025-10-12 11:14:34] -rw-r--r-- 1 boinc boinc      8741 Oct 12 11:14 runtime_log.err
[2025-10-12 11:14:34] -rw------- 1 boinc boinc       654 Oct 12 11:14 ODOLDmi18R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmpXjNDmKpaI3n.diag
[2025-10-12 11:14:34] -rw-r--r-- 1 boinc boinc     21718 Oct 12 11:14 stderr.txt
[2025-10-12 11:14:34] HITS file was successfully produced:
[2025-10-12 11:14:34] -rw------- 1 boinc boinc 195042878 Oct 12 11:13 shared/HITS.pool.root.1
[2025-10-12 11:14:34]  *** Contents of shared directory: ***
[2025-10-12 11:14:34] total 409228
[2025-10-12 11:14:34] -rw-r--r-- 2 boinc boinc 222792071 Oct 12 10:49 ATLAS.root_0
[2025-10-12 11:14:34] -rw-r--r-- 2 boinc boinc    569673 Oct 12 10:49 input.tar.gz
[2025-10-12 11:14:34] -rw-r--r-- 2 boinc boinc     15120 Oct 12 10:49 start_atlas.sh
[2025-10-12 11:14:34] -rw------- 1 boinc boinc 195042878 Oct 12 11:13 HITS.pool.root.1
[2025-10-12 11:14:34] -rw------- 1 boinc boinc    614400 Oct 12 11:14 result.tar.gz
11:14:35 (1078534): run_atlas exited; CPU time 15324.214998
11:14:35 (1078534): called boinc_finish(0)

</stderr_txt>
]]>

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