Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:16:26 (528754): wrapper (7.7.26015): starting
08:16:26 (528754): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 08:16:26] Arguments: --nthreads 12
[2025-10-12 08:16:26] Threads: 12
[2025-10-12 08:16:26] Checking for CVMFS
[2025-10-12 08:16:26] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 08:16:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 08:16:27] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 08:16:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 08:16:27] 2.11.5.0 2579 31663 218340 151624 2 96 31526391 45568001 17987 130560 0 306677942 99.861 130860545 23767 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-10-12 08:16:27] CVMFS is ok
[2025-10-12 08:16:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 08:16:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 08:16:27] Further information can be found at the LHC@home message board.
[2025-10-12 08:16:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 08:16:27] Checking for apptainer binary...
[2025-10-12 08:16:27] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 08:16:27] Running /usr/bin/apptainer --version
[2025-10-12 08:16:27] apptainer version 1.4.1-1.el9
[2025-10-12 08:16:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 08:16:27] wns0050.triumf.lcg
[2025-10-12 08:16:27] apptainer works
[2025-10-12 08:16:28] Set ATHENA_PROC_NUMBER=12
[2025-10-12 08:16:28] Set ATHENA_CORE_NUMBER=12
[2025-10-12 08:16:28] Starting ATLAS job with PandaID=6839991153
[2025-10-12 08:16:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 08:21:57]  *** The last 200 lines of the pilot log: ***
[2025-10-12 08:21:57] 2025-10-12 15:20:50,128 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 08:21:57] 2025-10-12 15:20:50,128 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 08:21:57] 2025-10-12 15:20:50,128 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 08:21:57] 2025-10-12 15:20:50,128 | WARNING  | wrong length of table data, x=[1760282274.0], y=[861.0] (must be same and length>=4)
[2025-10-12 08:21:57] 2025-10-12 15:20:50,129 | INFO     | could have reported an average CPU frequency of 2616 MHz (4 samples)
[2025-10-12 08:21:57] 2025-10-12 15:20:50,129 | INFO     | ..............................
[2025-10-12 08:21:57] 2025-10-12 15:20:50,129 | INFO     | . Timing measurements:
[2025-10-12 08:21:57] 2025-10-12 15:20:50,129 | INFO     | . get job = 0 s
[2025-10-12 08:21:57] 2025-10-12 15:20:50,129 | INFO     | . initial setup = 3 s
[2025-10-12 08:21:57] 2025-10-12 15:20:50,129 | INFO     | . payload setup = 15 s
[2025-10-12 08:21:57] 2025-10-12 15:20:50,129 | INFO     | . stage-in = 0 s
[2025-10-12 08:21:57] 2025-10-12 15:20:50,129 | INFO     | . payload execution = 53 s
[2025-10-12 08:21:57] 2025-10-12 15:20:50,129 | INFO     | . stage-out = 0 s
[2025-10-12 08:21:57] 2025-10-12 15:20:50,129 | INFO     | . log creation = 0 s
[2025-10-12 08:21:57] 2025-10-12 15:20:50,129 | INFO     | ..............................
[2025-10-12 08:21:57] 2025-10-12 15:20:50,129 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-12 08:21:57] 2025-10-12 15:20:50,129 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6839991153/pilotlog.txt
[2025-10-12 08:21:57] 2025-10-12 15:20:50,149 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-10-12 08:21:57] - Log from pilotlog.txt -
[2025-10-12 08:21:57] 2025-10-12 15:20:50,127 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6839991153/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 08:21:57] 2025-10-12 15:20:50,128 | INFO     | extracted standard info from prmon json
[2025-10-12 08:21:57] 2025-10-12 15:20:50,128 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 08:21:57] 2025-10-12 15:20:50,128 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 08:21:57] 2025-10-12 15:20:50,128 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 08:21:57] 2025-10-12 15:20:50,128 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 08:21:57] 2025-10-12 15:20:50,128 | WARNING  | wrong length of table data, x=[1760282274.0], y=[861.0] (must be same and length>=4)
[2025-10-12 08:21:57] 2025-10-12 15:20:50,129 | INFO     | could have reported an average CPU frequency of 2616 MHz (4 samples)
[2025-10-12 08:21:57] 2025-10-12 15:20:50,129 | INFO     | ..............................
[2025-10-12 08:21:57] 2025-10-12 15:20:50,129 | INFO     | . Timing measurements:
[2025-10-12 08:21:57] 2025-10-12 15:20:50,129 | INFO     | . get job = 0 s
[2025-10-12 08:21:57] 2025-10-12 15:20:50,129 | INFO     | . initial setup = 3 s
[2025-10-12 08:21:57] 2025-10-12 15:20:50,129 | INFO     | . payload setup = 15 s
[2025-10-12 08:21:57] 2025-10-12 15:20:50,129 | INFO     | . stage-in = 0 s
[2025-10-12 08:21:57] 2025-10-12 15:20:50,129 | INFO     | . payload execution = 53 s
[2025-10-12 08:21:57] 2025-10-12 15:20:50,129 | INFO     | . stage-out = 0 s
[2025-10-12 08:21:57] 2025-10-12 15:20:50,129 | INFO     | . log creation = 0 s
[2025-10-12 08:21:57] 2025-10-12 15:20:50,129 | INFO     | ..............................
[2025-10-12 08:21:57] 2025-10-12 15:20:50,129 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-12 08:21:57] 2025-10-12 15:20:50,129 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6839991153/pilotlog.txt
[2025-10-12 08:21:57] 2025-10-12 15:20:50,149 | WARNING  | 
[2025-10-12 08:21:57] [begin log extracts]
[2025-10-12 08:21:57] - Log from pilotlog.txt -
[2025-10-12 08:21:57] 2025-10-12 15:20:50,127 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6839991153/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 08:21:57] 2025-10-12 15:20:50,128 | INFO     | extracted standard info from prmon json
[2025-10-12 08:21:57] 2025-10-12 15:20:50,128 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 08:21:57] 2025-10-12 15:20:50,128 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 08:21:57] 2025-10-12 15:20:50,128 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 08:21:57] 2025-10-12 15:20:50,128 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 08:21:57] 2025-10-12 15:20:50,128 | WARNING  | wrong length of table data, x=[1760282274.0], y=[861.0] (must be same and length>=4)
[2025-10-12 08:21:57] 2025-10-12 15:20:50,129 | INFO     | could have reported an average CPU frequency of 2616 MHz (4 samples)
[2025-10-12 08:21:57] 2025-10-12 15:20:50,129 | INFO     | ..............................
[2025-10-12 08:21:57] 2025-10-12 15:20:50,129 | INFO     | . Timing measurements:
[2025-10-12 08:21:57] 2025-10-12 15:20:50,129 | INFO     | . get job = 0 s
[2025-10-12 08:21:57] 2025-10-12 15:20:50,129 | INFO     | . initial setup = 3 s
[2025-10-12 08:21:57] 2025-10-12 15:20:50,129 | INFO     | . payload setup = 15 s
[2025-10-12 08:21:57] 2025-10-12 15:20:50,129 | INFO     | . stage-in = 0 s
[2025-10-12 08:21:57] 2025-10-12 15:20:50,129 | INFO     | . payload execution = 53 s
[2025-10-12 08:21:57] 2025-10-12 15:20:50,129 | INFO     | . stage-out = 0 s
[2025-10-12 08:21:57] 2025-10-12 15:20:50,129 | INFO     | . log creation = 0 s
[2025-10-12 08:21:57] 2025-10-12 15:20:50,129 | INFO     | ..............................
[2025-10-12 08:21:57] 2025-10-12 15:20:50,129 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-12 08:21:57] 2025-10-12 15:20:50,129 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6839991153/pilotlog.txt
[2025-10-12 08:21:57] [end log extracts]
[2025-10-12 08:21:57] 2025-10-12 15:20:50,149 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-10-12 08:21:57] 2025-10-12 15:20:50,150 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-10-12 08:21:57] 2025-10-12 15:20:50,247 | INFO     | 
[2025-10-12 08:21:57] 2025-10-12 15:20:50,247 | INFO     | job summary report
[2025-10-12 08:21:57] 2025-10-12 15:20:50,247 | INFO     | --------------------------------------------------
[2025-10-12 08:21:57] 2025-10-12 15:20:50,247 | INFO     | PanDA job id: 6839991153
[2025-10-12 08:21:57] 2025-10-12 15:20:50,247 | INFO     | task id: 46676269
[2025-10-12 08:21:57] 2025-10-12 15:20:50,247 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-10-12 08:18:29,682 CRITICAL Transform executor raised TransformValidationExceptio
[2025-10-12 08:21:57] 2025-10-12 15:20:50,247 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 08:21:57] 2025-10-12 15:20:50,247 | INFO     | pilot state: failed 
[2025-10-12 08:21:57] 2025-10-12 15:20:50,247 | INFO     | transexitcode: 65
[2025-10-12 08:21:57] 2025-10-12 15:20:50,247 | INFO     | exeerrorcode: 65
[2025-10-12 08:21:57] 2025-10-12 15:20:50,247 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-10-12 08:21:57] 2025-10-12 15:20:50,247 | INFO     | exitcode: 65
[2025-10-12 08:21:57] 2025-10-12 15:20:50,247 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-10-12 08:21:57] 2025-10-12 15:20:50,247 | INFO     | cpuconsumptiontime: 19 s
[2025-10-12 08:21:57] 2025-10-12 15:20:50,247 | INFO     | nevents: 0
[2025-10-12 08:21:57] 2025-10-12 15:20:50,248 | INFO     | neventsw: 0
[2025-10-12 08:21:57] 2025-10-12 15:20:50,248 | INFO     | pid: 539325
[2025-10-12 08:21:57] 2025-10-12 15:20:50,248 | INFO     | pgrp: 539325
[2025-10-12 08:21:57] 2025-10-12 15:20:50,248 | INFO     | corecount: 12
[2025-10-12 08:21:57] 2025-10-12 15:20:50,248 | INFO     | event service: False
[2025-10-12 08:21:57] 2025-10-12 15:20:50,248 | INFO     | sizes: {0: 2348848, 11: 2348848, 12: 2349138, 21: 2349166, 72: 2372480, 73: 2376772, 77: 2376928, 205: 2377122}
[2025-10-12 08:21:57] 2025-10-12 15:20:50,248 | INFO     | --------------------------------------------------
[2025-10-12 08:21:57] 2025-10-12 15:20:50,248 | INFO     | 
[2025-10-12 08:21:57] 2025-10-12 15:20:50,248 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-10-12 08:21:57] 2025-10-12 15:20:50,295 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 08:21:57] 2025-10-12 15:20:50,296 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 08:21:57] 2025-10-12 15:20:50,296 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 08:21:57] 2025-10-12 15:20:50,296 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 08:21:57] 2025-10-12 15:20:50,296 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 08:21:57] 2025-10-12 15:20:50,296 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 08:21:57] 2025-10-12 15:20:50,296 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 08:21:57] 2025-10-12 15:20:50,296 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 08:21:57] 2025-10-12 15:20:50,296 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 08:21:57] 2025-10-12 15:20:50,296 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 08:21:57] 2025-10-12 15:20:50,296 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 08:21:57] 2025-10-12 15:20:50,296 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 08:21:57] 2025-10-12 15:20:50,296 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 08:21:57] 2025-10-12 15:20:50,296 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 08:21:57] 2025-10-12 15:20:50,296 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 08:21:57] 2025-10-12 15:20:50,300 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 08:21:57] 2025-10-12 15:20:50,300 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 08:21:57] 2025-10-12 15:20:50,300 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 08:21:57] 2025-10-12 15:20:50,300 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 08:21:57] 2025-10-12 15:20:50,300 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 08:21:57] 2025-10-12 15:20:50,300 | INFO     | job 6839991153 has completed (purged errors)
[2025-10-12 08:21:57] 2025-10-12 15:20:50,300 | INFO     | overall cleanup function is called
[2025-10-12 08:21:57] 2025-10-12 15:20:51,307 | INFO     | --- collectZombieJob: --- 10, [539325]
[2025-10-12 08:21:57] 2025-10-12 15:20:51,307 | INFO     | zombie collector waiting for pid 539325
[2025-10-12 08:21:57] 2025-10-12 15:20:51,307 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 08:21:57] 2025-10-12 15:20:51,307 | INFO     | collected zombie processes
[2025-10-12 08:21:57] 2025-10-12 15:20:51,307 | INFO     | will attempt to kill all subprocesses of pid=539325
[2025-10-12 08:21:57] 2025-10-12 15:20:51,537 | INFO     | process IDs to be killed: [539325] (in reverse order)
[2025-10-12 08:21:57] 2025-10-12 15:20:51,645 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 08:21:57] 2025-10-12 15:20:51,645 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 08:21:57] 2025-10-12 15:20:51,662 | INFO     | did not find any defunct processes belonging to 539325
[2025-10-12 08:21:57] 2025-10-12 15:20:51,679 | INFO     | did not find any defunct processes belonging to 539325
[2025-10-12 08:21:57] 2025-10-12 15:20:51,679 | INFO     | ready for new job
[2025-10-12 08:21:57] 2025-10-12 15:20:51,680 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 08:21:57] 2025-10-12 15:20:51,681 | INFO     | ***************************************
[2025-10-12 08:21:57] 2025-10-12 15:20:51,681 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 08:21:57] 2025-10-12 15:20:51,681 | INFO     | ***************************************
[2025-10-12 08:21:57] 2025-10-12 15:20:51,681 | INFO     | 
[2025-10-12 08:21:57] 2025-10-12 15:20:51,685 | INFO     | architecture information:
[2025-10-12 08:21:57] 2025-10-12 15:20:51,688 | INFO     | executing command: cat /etc/os-release
[2025-10-12 08:21:57] 2025-10-12 15:20:51,711 | INFO     | cat /etc/os-release:
[2025-10-12 08:21:57] NAME="CentOS Linux"
[2025-10-12 08:21:57] VERSION="7 (Core)"
[2025-10-12 08:21:57] ID="centos"
[2025-10-12 08:21:57] ID_LIKE="rhel fedora"
[2025-10-12 08:21:57] VERSION_ID="7"
[2025-10-12 08:21:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 08:21:57] ANSI_COLOR="0;31"
[2025-10-12 08:21:57] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 08:21:57] HOME_URL="https://www.centos.org/"
[2025-10-12 08:21:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 08:21:57] 
[2025-10-12 08:21:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 08:21:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 08:21:57] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 08:21:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 08:21:57] 
[2025-10-12 08:21:57] 2025-10-12 15:20:51,714 | INFO     | ***************************************
[2025-10-12 08:21:57] 2025-10-12 15:20:52,217 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-10-12 08:21:57] 2025-10-12 15:20:52,239 | INFO     | sufficient remaining disk space (1924415881216 B)
[2025-10-12 08:21:57] 2025-10-12 15:20:52,240 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 08:21:57] 2025-10-12 15:20:52,240 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 08:21:57] 2025-10-12 15:20:52,240 | INFO     | update_server=False
[2025-10-12 08:21:57] 2025-10-12 15:20:52,240 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 08:21:57] 2025-10-12 15:20:52,241 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 08:21:57] 2025-10-12 15:20:52,241 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 08:21:57] 2025-10-12 15:20:52,310 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 08:21:57] 2025-10-12 15:20:52,310 | INFO     | aborting loop
[2025-10-12 08:21:57] 2025-10-12 15:20:52,725 | INFO     | all data control threads have been joined
[2025-10-12 08:21:57] 2025-10-12 15:20:52,777 | INFO     | all job control threads have been joined
[2025-10-12 08:21:57] 2025-10-12 15:20:52,960 | INFO     | all payload control threads have been joined
[2025-10-12 08:21:57] 2025-10-12 15:20:53,247 | INFO     | [job] retrieve thread has finished
[2025-10-12 08:21:57] 2025-10-12 15:20:53,248 | INFO     | [job] queue monitor thread has finished
[2025-10-12 08:21:57] 2025-10-12 15:20:53,316 | INFO     | [job] job monitor thread has finished
[2025-10-12 08:21:57] 2025-10-12 15:20:53,435 | INFO     | [payload] failed_post thread has finished
[2025-10-12 08:21:57] 2025-10-12 15:20:53,450 | INFO     | [job] validate thread has finished
[2025-10-12 08:21:57] 2025-10-12 15:20:53,630 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 08:21:57] 2025-10-12 15:20:53,701 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 08:21:57] 2025-10-12 15:20:53,732 | INFO     | [data] control thread has finished
[2025-10-12 08:21:57] 2025-10-12 15:20:53,767 | INFO     | [data] copytool_in thread has finished
[2025-10-12 08:21:57] 2025-10-12 15:20:53,783 | INFO     | [job] control thread has finished
[2025-10-12 08:21:57] 2025-10-12 15:20:53,907 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 08:21:57] 2025-10-12 15:20:53,943 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 08:21:57] 2025-10-12 15:20:53,965 | INFO     | [payload] control thread has finished
[2025-10-12 08:21:57] 2025-10-12 15:20:54,056 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 08:21:57] 2025-10-12 15:20:54,248 | INFO     | [data] copytool_out thread has finished
[2025-10-12 08:21:57] 2025-10-12 15:20:54,479 | INFO     | [payload] validate_post thread has finished
[2025-10-12 08:21:57] 2025-10-12 15:20:57,956 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 08:21:57] 2025-10-12 15:21:22,419 | INFO     | PID=532448 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-12 08:21:57] 2025-10-12 15:21:22,420 | INFO     | .. there are 34 such processes running
[2025-10-12 08:21:57] 2025-10-12 15:21:22,420 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 08:21:57] 2025-10-12 15:21:22,420 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 08:21:57] 2025-10-12 15:21:22,420 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 08:21:57] 2025-10-12 15:21:51,326 | INFO     | [monitor] cgroup control has ended
[2025-10-12 08:21:57] 2025-10-12 15:21:51,868 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140662261163840)>', '<ExcThread(monitor, started 140661571442432)>']
[2025-10-12 08:21:57] 2025-10-12 15:21:52,590 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 08:21:57] 2025-10-12 15:21:52,590 | INFO     | [monitor] control thread has ended
[2025-10-12 08:21:57] 2025-10-12 15:21:56,894 | INFO     | all workflow threads have been joined
[2025-10-12 08:21:57] 2025-10-12 15:21:56,895 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 08:21:57] 2025-10-12 15:21:56,896 | INFO     | traces error code: 0
[2025-10-12 08:21:57] 2025-10-12 15:21:56,896 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 08:21:57] 2025-10-12 15:21:57,065 [wrapper] ==== pilot stdout END ====
[2025-10-12 08:21:57] 2025-10-12 15:21:57,080 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 08:21:57] 2025-10-12 15:21:57,088 [wrapper] pilotpid: 532448
[2025-10-12 08:21:57] 2025-10-12 15:21:57,094 [wrapper] Pilot exit status: 0
[2025-10-12 08:21:57] 2025-10-12 15:21:57,145 [wrapper] pandaids: 6839991153
[2025-10-12 08:21:57] 2025-10-12 15:21:57,285 [wrapper] cleanup supervisor_pilot  532454 532449
[2025-10-12 08:21:57] 2025-10-12 15:21:57,296 [wrapper] Test setup, not cleaning
[2025-10-12 08:21:57] 2025-10-12 15:21:57,307 [wrapper] apfmon messages muted
[2025-10-12 08:21:57] 2025-10-12 15:21:57,309 [wrapper] ==== wrapper stdout END ====
[2025-10-12 08:21:57] 2025-10-12 15:21:57,310 [wrapper] ==== wrapper stderr END ====
[2025-10-12 08:21:57]  *** Error codes and diagnostics ***
[2025-10-12 08:21:57]     "exeErrorCode": 65,
[2025-10-12 08:21:57]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-10-12 08:21:57]     "pilotErrorCode": 1305,
[2025-10-12 08:21:57]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-10-12 08:21:57]  *** Listing of results directory ***
[2025-10-12 08:21:57] total 218848
[2025-10-12 08:21:57] -rw-r--r--. 1 boinc boinc    557409 Oct 12 06:05 pilot3.tar.gz
[2025-10-12 08:21:57] -rw-r--r--. 1 boinc boinc      5112 Oct 12 06:17 queuedata.json
[2025-10-12 08:21:57] -rwx------. 1 boinc boinc     36292 Oct 12 06:17 runpilot2-wrapper.sh
[2025-10-12 08:21:57] -rw-r--r--. 1 boinc boinc       100 Oct 12 08:16 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 08:21:57] -rwxr-xr-x. 1 boinc boinc      7986 Oct 12 08:16 run_atlas
[2025-10-12 08:21:57] -rw-r--r--. 1 boinc boinc       105 Oct 12 08:16 job.xml
[2025-10-12 08:21:57] -rw-r--r--. 1 boinc boinc      6593 Oct 12 08:16 init_data.xml
[2025-10-12 08:21:57] -rw-r--r--. 2 boinc boinc 219978648 Oct 12 08:16 EVNT.46676267._003861.pool.root.1
[2025-10-12 08:21:57] -rw-r--r--. 2 boinc boinc     15120 Oct 12 08:16 start_atlas.sh
[2025-10-12 08:21:57] drwxrwx--x. 2 boinc boinc      4096 Oct 12 08:16 shared
[2025-10-12 08:21:57] -rw-r--r--. 2 boinc boinc    569674 Oct 12 08:16 input.tar.gz
[2025-10-12 08:21:57] -rw-r--r--. 1 boinc boinc         0 Oct 12 08:16 boinc_lockfile
[2025-10-12 08:21:57] -rw-r--r--. 1 boinc boinc      2547 Oct 12 08:16 pandaJob.out
[2025-10-12 08:21:57] -rw-------. 1 boinc boinc    975528 Oct 12 08:16 agis_schedconf.cvmfs.json
[2025-10-12 08:21:57] -rw-------. 1 boinc boinc   1560580 Oct 12 08:16 agis_ddmendpoints.agis.ALL.json
[2025-10-12 08:21:57] drwx------. 5 boinc boinc      4096 Oct 12 08:16 pilot3
[2025-10-12 08:21:57] -rw-r--r--. 1 boinc boinc       523 Oct 12 08:18 boinc_task_state.xml
[2025-10-12 08:21:57] -rw-------. 1 boinc boinc       975 Oct 12 08:18 memory_monitor_summary.json
[2025-10-12 08:21:57] -rw-------. 1 boinc boinc     22051 Oct 12 08:18 log.46676269._079282.job.log.tgz.1
[2025-10-12 08:21:57] -rw-------. 1 boinc boinc      8419 Oct 12 08:20 heartbeat.json
[2025-10-12 08:21:57] -rw-------. 1 boinc boinc        95 Oct 12 08:21 pilot_heartbeat.json
[2025-10-12 08:21:57] -rw-r--r--. 1 boinc boinc      8192 Oct 12 08:21 boinc_mmap_file
[2025-10-12 08:21:57] -rw-r--r--. 1 boinc boinc        22 Oct 12 08:21 wrapper_checkpoint.txt
[2025-10-12 08:21:57] -rw-------. 1 boinc boinc      4822 Oct 12 08:21 pilotlog.txt
[2025-10-12 08:21:57] -rw-------. 1 boinc boinc     91545 Oct 12 08:21 log.46676269._079282.job.log.1
[2025-10-12 08:21:57] -rw-------. 1 boinc boinc       188 Oct 12 08:21 output.list
[2025-10-12 08:21:57] -rw-r--r--. 1 boinc boinc       620 Oct 12 08:21 runtime_log
[2025-10-12 08:21:57] -rw-------. 1 boinc boinc    133120 Oct 12 08:21 result.tar.gz
[2025-10-12 08:21:57] -rw-r--r--. 1 boinc boinc      8528 Oct 12 08:21 runtime_log.err
[2025-10-12 08:21:57] -rw-------. 1 boinc boinc       647 Oct 12 08:21 LYzLDmN8AS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmtyjNDm1n4SYo.diag
[2025-10-12 08:21:57] -rw-r--r--. 1 boinc boinc     13617 Oct 12 08:21 stderr.txt
[2025-10-12 08:21:57] No HITS result produced
[2025-10-12 08:21:57]  *** Contents of shared directory: ***
[2025-10-12 08:21:57] total 215532
[2025-10-12 08:21:57] -rw-r--r--. 2 boinc boinc 219978648 Oct 12 08:16 ATLAS.root_0
[2025-10-12 08:21:57] -rw-r--r--. 2 boinc boinc     15120 Oct 12 08:16 start_atlas.sh
[2025-10-12 08:21:57] -rw-r--r--. 2 boinc boinc    569674 Oct 12 08:16 input.tar.gz
[2025-10-12 08:21:57] -rw-------. 1 boinc boinc    133120 Oct 12 08:21 result.tar.gz
08:21:59 (528754): run_atlas exited; CPU time 25.961211
08:21:59 (528754): called boinc_finish(0)

</stderr_txt>
]]>

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