Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:02:41 (3213): wrapper (7.7.26015): starting
21:02:41 (3213): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 21:02:41] Arguments: --nthreads 8
[2025-10-12 21:02:41] Threads: 8
[2025-10-12 21:02:41] Checking for CVMFS
[2025-10-12 21:02:42] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 21:02:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 21:02:42] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 21:02:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 21:02:42] 2.11.2.0 4673 107770 108284 151633 2 165 16418813 25165824 4096 130560 0 38980957 99.910 16343411 2649 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-10-12 21:02:42] CVMFS is ok
[2025-10-12 21:02:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 21:02:42] Checking for apptainer binary...
[2025-10-12 21:02:42] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 21:02:42] Running /usr/bin/apptainer --version
[2025-10-12 21:02:42] apptainer version 1.3.2-1.el7
[2025-10-12 21:02:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 21:02:44] cg-vwn293.simple-grid.lan
[2025-10-12 21:02:44] apptainer works
[2025-10-12 21:02:44] Set ATHENA_PROC_NUMBER=8
[2025-10-12 21:02:44] Set ATHENA_CORE_NUMBER=8
[2025-10-12 21:02:44] Starting ATLAS job with PandaID=6839991141
[2025-10-12 21:02:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 01:03:40]  *** The last 200 lines of the pilot log: ***
[2025-10-13 01:03:40] 2025-10-12 23:03:04,375 | INFO     | sum of square deviations: 3972995422.5
[2025-10-13 01:03:40] 2025-10-12 23:03:04,377 | INFO     | sum of deviations: 8126797803.500004
[2025-10-13 01:03:40] 2025-10-12 23:03:04,377 | INFO     | mean x: 1760302946.5
[2025-10-13 01:03:40] 2025-10-12 23:03:04,377 | INFO     | mean y: 2477150.4145299145
[2025-10-13 01:03:40] 2025-10-12 23:03:04,377 | INFO     | -- intersect: -3598238329.4208326
[2025-10-13 01:03:40] 2025-10-12 23:03:04,378 | INFO     | intersect: -3598238329.4208326
[2025-10-13 01:03:40] 2025-10-12 23:03:04,378 | INFO     | chi2: 2.3167809887703528
[2025-10-13 01:03:40] 2025-10-12 23:03:04,379 | INFO     | sum of square deviations: 3723716330.0
[2025-10-13 01:03:40] 2025-10-12 23:03:04,381 | INFO     | sum of deviations: 22950673123.0
[2025-10-13 01:03:40] 2025-10-12 23:03:04,381 | INFO     | mean x: 1760302794.0
[2025-10-13 01:03:40] 2025-10-12 23:03:04,381 | INFO     | mean y: 2486055.2139737993
[2025-10-13 01:03:40] 2025-10-12 23:03:04,381 | INFO     | -- intersect: -10846926317.343847
[2025-10-13 01:03:40] 2025-10-12 23:03:04,381 | INFO     | intersect: -10846926317.343847
[2025-10-13 01:03:40] 2025-10-12 23:03:04,382 | INFO     | chi2: 1.5498032064006995
[2025-10-13 01:03:40] 2025-10-12 23:03:04,382 | INFO     | current chi2=1.5498032064006995 (change=33.105320964185395 %)
[2025-10-13 01:03:40] 2025-10-12 23:03:04,382 | INFO     | sum of square deviations: 3485088600.0
[2025-10-13 01:03:40] 2025-10-12 23:03:04,384 | INFO     | sum of deviations: 22074468146.999996
[2025-10-13 01:03:40] 2025-10-12 23:03:04,384 | INFO     | mean x: 1760302641.5
[2025-10-13 01:03:40] 2025-10-12 23:03:04,384 | INFO     | mean y: 2485495.1785714286
[2025-10-13 01:03:40] 2025-10-12 23:03:04,384 | INFO     | -- intersect: -11147229490.222862
[2025-10-13 01:03:40] 2025-10-12 23:03:04,385 | INFO     | intersect: -11147229490.222862
[2025-10-13 01:03:40] 2025-10-12 23:03:04,385 | INFO     | chi2: 1.550496557899903
[2025-10-13 01:03:40] 2025-10-12 23:03:04,385 | INFO     | current chi2=1.550496557899903 (change=-0.04473803488985111 %)
[2025-10-13 01:03:40] 2025-10-12 23:03:04,385 | INFO     | right removable region: 223
[2025-10-13 01:03:40] 2025-10-12 23:03:04,386 | INFO     | sum of square deviations: 3723716330.0
[2025-10-13 01:03:40] 2025-10-12 23:03:04,387 | INFO     | sum of deviations: -26344194257.0
[2025-10-13 01:03:40] 2025-10-12 23:03:04,388 | INFO     | mean x: 1760303099.0
[2025-10-13 01:03:40] 2025-10-12 23:03:04,388 | INFO     | mean y: 2498020.8165938864
[2025-10-13 01:03:40] 2025-10-12 23:03:04,388 | INFO     | -- intersect: 12456123023.786436
[2025-10-13 01:03:40] 2025-10-12 23:03:04,388 | INFO     | intersect: 12456123023.786436
[2025-10-13 01:03:40] 2025-10-12 23:03:04,388 | INFO     | chi2: 0.8927536952189565
[2025-10-13 01:03:40] 2025-10-12 23:03:04,389 | INFO     | current chi2=0.8927536952189565 (change=61.465770845573466 %)
[2025-10-13 01:03:40] 2025-10-12 23:03:04,389 | INFO     | sum of square deviations: 3485088600.0
[2025-10-13 01:03:40] 2025-10-12 23:03:04,391 | INFO     | sum of deviations: -19318416411.0
[2025-10-13 01:03:40] 2025-10-12 23:03:04,391 | INFO     | mean x: 1760303251.5
[2025-10-13 01:03:40] 2025-10-12 23:03:04,391 | INFO     | mean y: 2493523.5535714286
[2025-10-13 01:03:40] 2025-10-12 23:03:04,391 | INFO     | -- intersect: 9760142503.299528
[2025-10-13 01:03:40] 2025-10-12 23:03:04,391 | INFO     | intersect: 9760142503.299528
[2025-10-13 01:03:40] 2025-10-12 23:03:04,392 | INFO     | chi2: 0.8687199605801468
[2025-10-13 01:03:40] 2025-10-12 23:03:04,392 | INFO     | current chi2=0.8687199605801468 (change=2.6920901887631223 %)
[2025-10-13 01:03:40] 2025-10-12 23:03:04,392 | INFO     | left removable region: 20
[2025-10-13 01:03:40] 2025-10-12 23:03:04,392 | INFO     | sum of square deviations: 2593916542.0
[2025-10-13 01:03:40] 2025-10-12 23:03:04,394 | INFO     | sum of deviations: 7236289273.0
[2025-10-13 01:03:40] 2025-10-12 23:03:04,394 | INFO     | mean x: 1760303221.0
[2025-10-13 01:03:40] 2025-10-12 23:03:04,394 | INFO     | mean y: 2493906.21182266
[2025-10-13 01:03:40] 2025-10-12 23:03:04,394 | INFO     | -- intersect: -4908251335.239993
[2025-10-13 01:03:40] 2025-10-12 23:03:04,394 | INFO     | intersect: -4908251335.239993
[2025-10-13 01:03:40] 2025-10-12 23:03:04,395 | INFO     | chi2: 0.000818024211838559
[2025-10-13 01:03:40] 2025-10-12 23:03:04,395 | INFO     | -- intersect: -4908251335.239993
[2025-10-13 01:03:40] 2025-10-12 23:03:04,395 | INFO     | current memory leak: 2.79 B/s (using 203 data points, chi2=0.00)
[2025-10-13 01:03:40] 2025-10-12 23:03:04,396 | INFO     | could have reported an average CPU frequency of 1999 MHz (11 samples)
[2025-10-13 01:03:40] 2025-10-12 23:03:04,396 | INFO     | ..............................
[2025-10-13 01:03:40] 2025-10-12 23:03:04,396 | INFO     | . Timing measurements:
[2025-10-13 01:03:40] 2025-10-12 23:03:04,396 | INFO     | . get job = 0 s
[2025-10-13 01:03:40] 2025-10-12 23:03:04,396 | INFO     | . initial setup = 2 s
[2025-10-13 01:03:40] 2025-10-12 23:03:04,396 | INFO     | . payload setup = 10 s
[2025-10-13 01:03:40] 2025-10-12 23:03:04,397 | INFO     | . stage-in = 0 s
[2025-10-13 01:03:40] 2025-10-12 23:03:04,397 | INFO     | . payload execution = 14260 s
[2025-10-13 01:03:40] 2025-10-12 23:03:04,397 | INFO     | . stage-out = 3 s
[2025-10-13 01:03:40] 2025-10-12 23:03:04,397 | INFO     | . log creation = 1 s
[2025-10-13 01:03:40] 2025-10-12 23:03:04,397 | INFO     | ..............................
[2025-10-13 01:03:40] 2025-10-12 23:03:04,535 | INFO     | 
[2025-10-13 01:03:40] 2025-10-12 23:03:04,536 | INFO     | job summary report
[2025-10-13 01:03:40] 2025-10-12 23:03:04,536 | INFO     | --------------------------------------------------
[2025-10-13 01:03:40] 2025-10-12 23:03:04,536 | INFO     | PanDA job id: 6839991141
[2025-10-13 01:03:40] 2025-10-12 23:03:04,536 | INFO     | task id: 46676269
[2025-10-13 01:03:40] 2025-10-12 23:03:04,536 | INFO     | errors: (none)
[2025-10-13 01:03:40] 2025-10-12 23:03:04,536 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 01:03:40] 2025-10-12 23:03:04,536 | INFO     | pilot state: finished 
[2025-10-13 01:03:40] 2025-10-12 23:03:04,536 | INFO     | transexitcode: 0
[2025-10-13 01:03:40] 2025-10-12 23:03:04,537 | INFO     | exeerrorcode: 0
[2025-10-13 01:03:40] 2025-10-12 23:03:04,537 | INFO     | exeerrordiag: 
[2025-10-13 01:03:40] 2025-10-12 23:03:04,537 | INFO     | exitcode: 0
[2025-10-13 01:03:40] 2025-10-12 23:03:04,537 | INFO     | exitmsg: OK
[2025-10-13 01:03:40] 2025-10-12 23:03:04,537 | INFO     | cpuconsumptiontime: 54335 s
[2025-10-13 01:03:40] 2025-10-12 23:03:04,537 | INFO     | nevents: 400
[2025-10-13 01:03:40] 2025-10-12 23:03:04,537 | INFO     | neventsw: 0
[2025-10-13 01:03:40] 2025-10-12 23:03:04,537 | INFO     | pid: 13461
[2025-10-13 01:03:40] 2025-10-12 23:03:04,537 | INFO     | pgrp: 13461
[2025-10-13 01:03:40] 2025-10-12 23:03:04,537 | INFO     | corecount: 8
[2025-10-13 01:03:40] 2025-10-12 23:03:04,538 | INFO     | event service: False
[2025-10-13 01:03:40] 2025-10-12 23:03:04,538 | INFO     | sizes: {0: 2348686, 1: 2348885, 9: 2349147, 12: 2349175, 14275: 2379323, 14279: 2388321, 14281: 2388505, 14381: 2388699}
[2025-10-13 01:03:40] 2025-10-12 23:03:04,538 | INFO     | --------------------------------------------------
[2025-10-13 01:03:40] 2025-10-12 23:03:04,538 | INFO     | 
[2025-10-13 01:03:40] 2025-10-12 23:03:04,538 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2025-10-13 01:03:40] 2025-10-12 23:03:05,140 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 01:03:40] 2025-10-12 23:03:05,141 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 01:03:40] 2025-10-12 23:03:05,141 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 01:03:40] 2025-10-12 23:03:05,141 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 01:03:40] 2025-10-12 23:03:05,141 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 01:03:40] 2025-10-12 23:03:05,141 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 01:03:40] 2025-10-12 23:03:05,141 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 01:03:40] 2025-10-12 23:03:05,141 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 01:03:40] 2025-10-12 23:03:05,141 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 01:03:40] 2025-10-12 23:03:05,142 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 01:03:40] 2025-10-12 23:03:05,142 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 01:03:40] 2025-10-12 23:03:05,142 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 01:03:40] 2025-10-12 23:03:05,142 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 01:03:40] 2025-10-12 23:03:05,142 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 01:03:40] 2025-10-12 23:03:05,142 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 01:03:40] 2025-10-12 23:03:05,142 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 01:03:40] 2025-10-12 23:03:05,142 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 01:03:40] 2025-10-12 23:03:05,142 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 01:03:40] 2025-10-12 23:03:05,143 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 01:03:40] 2025-10-12 23:03:05,143 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 01:03:40] 2025-10-12 23:03:05,143 | INFO     | job 6839991141 has completed (purged errors)
[2025-10-13 01:03:40] 2025-10-12 23:03:05,143 | INFO     | overall cleanup function is called
[2025-10-13 01:03:40] 2025-10-12 23:03:05,246 | INFO     | PID=7006 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-13 01:03:40] 2025-10-12 23:03:05,246 | INFO     | .. there are 9 such processes running
[2025-10-13 01:03:40] 2025-10-12 23:03:06,153 | INFO     | --- collectZombieJob: --- 10, [13461]
[2025-10-13 01:03:40] 2025-10-12 23:03:06,153 | INFO     | zombie collector waiting for pid 13461
[2025-10-13 01:03:40] 2025-10-12 23:03:06,153 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 01:03:40] 2025-10-12 23:03:06,153 | INFO     | collected zombie processes
[2025-10-13 01:03:40] 2025-10-12 23:03:06,153 | INFO     | will attempt to kill all subprocesses of pid=13461
[2025-10-13 01:03:40] 2025-10-12 23:03:06,294 | INFO     | process IDs to be killed: [13461] (in reverse order)
[2025-10-13 01:03:40] 2025-10-12 23:03:07,328 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 01:03:40] 2025-10-12 23:03:07,329 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 01:03:40] 2025-10-12 23:03:07,332 | INFO     | did not find any defunct processes belonging to 13461
[2025-10-13 01:03:40] 2025-10-12 23:03:07,336 | INFO     | did not find any defunct processes belonging to 13461
[2025-10-13 01:03:40] 2025-10-12 23:03:07,336 | INFO     | ready for new job
[2025-10-13 01:03:40] 2025-10-12 23:03:07,336 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 01:03:40] 2025-10-12 23:03:07,338 | INFO     | ***************************************
[2025-10-13 01:03:40] 2025-10-12 23:03:07,339 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 01:03:40] 2025-10-12 23:03:07,339 | INFO     | ***************************************
[2025-10-13 01:03:40] 2025-10-12 23:03:07,339 | INFO     | 
[2025-10-13 01:03:40] 2025-10-12 23:03:07,344 | INFO     | pilot is running in a VM
[2025-10-13 01:03:40] 2025-10-12 23:03:07,344 | INFO     | architecture information:
[2025-10-13 01:03:40] 2025-10-12 23:03:07,358 | INFO     | executing command: cat /etc/os-release
[2025-10-13 01:03:40] 2025-10-12 23:03:07,608 | INFO     | cat /etc/os-release:
[2025-10-13 01:03:40] NAME="CentOS Linux"
[2025-10-13 01:03:40] VERSION="7 (Core)"
[2025-10-13 01:03:40] ID="centos"
[2025-10-13 01:03:40] ID_LIKE="rhel fedora"
[2025-10-13 01:03:40] VERSION_ID="7"
[2025-10-13 01:03:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 01:03:40] ANSI_COLOR="0;31"
[2025-10-13 01:03:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 01:03:40] HOME_URL="https://www.centos.org/"
[2025-10-13 01:03:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 01:03:40] 
[2025-10-13 01:03:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 01:03:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 01:03:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 01:03:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 01:03:40] 
[2025-10-13 01:03:40] 2025-10-12 23:03:07,608 | INFO     | ***************************************
[2025-10-13 01:03:40] 2025-10-12 23:03:08,112 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2025-10-13 01:03:40] 2025-10-12 23:03:08,246 | INFO     | sufficient remaining disk space (495063138304 B)
[2025-10-13 01:03:40] 2025-10-12 23:03:08,247 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 01:03:40] 2025-10-12 23:03:08,247 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 01:03:40] 2025-10-12 23:03:08,247 | INFO     | update_server=False
[2025-10-13 01:03:40] 2025-10-12 23:03:08,247 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 01:03:40] 2025-10-12 23:03:08,331 | INFO     | all data control threads have been joined
[2025-10-13 01:03:40] 2025-10-12 23:03:08,426 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 01:03:40] 2025-10-12 23:03:08,426 | INFO     | aborting loop
[2025-10-13 01:03:40] 2025-10-12 23:03:08,698 | INFO     | all job control threads have been joined
[2025-10-13 01:03:40] 2025-10-12 23:03:08,745 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 01:03:40] 2025-10-12 23:03:09,253 | INFO     | [job] retrieve thread has finished
[2025-10-13 01:03:40] 2025-10-12 23:03:09,315 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 01:03:40] 2025-10-12 23:03:09,324 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 01:03:40] 2025-10-12 23:03:09,337 | INFO     | [data] control thread has finished
[2025-10-13 01:03:40] 2025-10-12 23:03:09,425 | INFO     | [job] validate thread has finished
[2025-10-13 01:03:40] 2025-10-12 23:03:09,432 | INFO     | [job] job monitor thread has finished
[2025-10-13 01:03:40] 2025-10-12 23:03:09,550 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 01:03:40] 2025-10-12 23:03:09,695 | INFO     | all payload control threads have been joined
[2025-10-13 01:03:40] 2025-10-12 23:03:09,704 | INFO     | [job] control thread has finished
[2025-10-13 01:03:40] 2025-10-12 23:03:09,712 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 01:03:40] 2025-10-12 23:03:09,853 | INFO     | [payload] failed_post thread has finished
[2025-10-13 01:03:40] 2025-10-12 23:03:10,081 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 01:03:40] 2025-10-12 23:03:10,130 | INFO     | [data] copytool_in thread has finished
[2025-10-13 01:03:40] 2025-10-12 23:03:10,402 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 01:03:40] 2025-10-12 23:03:10,556 | INFO     | [job] queue monitor thread has finished
[2025-10-13 01:03:40] 2025-10-12 23:03:10,680 | INFO     | [payload] validate_post thread has finished
[2025-10-13 01:03:40] 2025-10-12 23:03:10,701 | INFO     | [payload] control thread has finished
[2025-10-13 01:03:40] 2025-10-12 23:03:10,752 | INFO     | [data] copytool_out thread has finished
[2025-10-13 01:03:40] 2025-10-12 23:03:13,064 [wrapper] supervise_pilot (15 min periods counter: 17)
[2025-10-13 01:03:40] 2025-10-12 23:03:13,722 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 01:03:40] 2025-10-12 23:03:28,299 | INFO     | [monitor] cgroup control has ended
[2025-10-13 01:03:40] 2025-10-12 23:03:30,397 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139960200968000)>', '<ExcThread(monitor, started 139959629510400)>']
[2025-10-13 01:03:40] 2025-10-12 23:03:35,423 | INFO     | all workflow threads have been joined
[2025-10-13 01:03:40] 2025-10-12 23:03:35,423 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 01:03:40] 2025-10-12 23:03:35,423 | INFO     | traces error code: 0
[2025-10-13 01:03:40] 2025-10-12 23:03:35,423 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 01:03:40] 2025-10-12 23:03:37,412 | INFO     | PID=7006 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-13 01:03:40] 2025-10-12 23:03:37,412 | INFO     | .. there are 9 such processes running
[2025-10-13 01:03:40] 2025-10-12 23:03:37,412 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 01:03:40] 2025-10-12 23:03:37,413 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 01:03:40] 2025-10-12 23:03:37,413 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 01:03:40] 2025-10-12 23:03:37,413 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 01:03:40] 2025-10-12 23:03:37,413 | INFO     | [monitor] control thread has ended
[2025-10-13 01:03:40] 2025-10-12 23:03:37,759 [wrapper] ==== pilot stdout END ====
[2025-10-13 01:03:40] 2025-10-12 23:03:37,867 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 01:03:40] 2025-10-12 23:03:37,933 [wrapper] pilotpid: 7006
[2025-10-13 01:03:40] 2025-10-12 23:03:38,049 [wrapper] Pilot exit status: 0
[2025-10-13 01:03:40] 2025-10-12 23:03:38,470 [wrapper] pandaids: 6839991141
[2025-10-13 01:03:40] 2025-10-12 23:03:39,052 [wrapper] cleanup supervisor_pilot  8482 7007
[2025-10-13 01:03:40] 2025-10-12 23:03:39,140 [wrapper] Test setup, not cleaning
[2025-10-13 01:03:40] 2025-10-12 23:03:39,197 [wrapper] apfmon messages muted
[2025-10-13 01:03:40] 2025-10-12 23:03:39,281 [wrapper] ==== wrapper stdout END ====
[2025-10-13 01:03:40] 2025-10-12 23:03:39,373 [wrapper] ==== wrapper stderr END ====
[2025-10-13 01:03:40]  *** Error codes and diagnostics ***
[2025-10-13 01:03:40]     "exeErrorCode": 0,
[2025-10-13 01:03:40]     "exeErrorDiag": "",
[2025-10-13 01:03:40]     "pilotErrorCode": 0,
[2025-10-13 01:03:40]     "pilotErrorDiag": "",
[2025-10-13 01:03:40]  *** Listing of results directory ***
[2025-10-13 01:03:40] total 413452
[2025-10-13 01:03:40] -rw-r--r--. 1 boinc boinc    557409 Oct 12 15:05 pilot3.tar.gz
[2025-10-13 01:03:40] -rw-r--r--. 1 boinc boinc      5112 Oct 12 15:17 queuedata.json
[2025-10-13 01:03:40] -rwx------. 1 boinc boinc     36292 Oct 12 15:17 runpilot2-wrapper.sh
[2025-10-13 01:03:40] -rw-r--r--. 1 boinc boinc       100 Oct 12 21:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 01:03:40] -rwxr-xr-x. 1 boinc boinc      7986 Oct 12 21:02 run_atlas
[2025-10-13 01:03:40] -rw-r--r--. 1 boinc boinc       105 Oct 12 21:02 job.xml
[2025-10-13 01:03:40] -rw-r--r--. 2 boinc boinc 222802895 Oct 12 21:02 EVNT.46676267._003860.pool.root.1
[2025-10-13 01:03:40] -rw-r--r--. 2 boinc boinc     15120 Oct 12 21:02 start_atlas.sh
[2025-10-13 01:03:40] drwxrwx--x. 2 boinc boinc        68 Oct 12 21:02 shared
[2025-10-13 01:03:40] -rw-r--r--. 2 boinc boinc    569679 Oct 12 21:02 input.tar.gz
[2025-10-13 01:03:40] -rw-r--r--. 1 boinc boinc      6382 Oct 12 21:02 init_data.xml
[2025-10-13 01:03:40] -rw-r--r--. 1 boinc boinc         0 Oct 12 21:02 boinc_lockfile
[2025-10-13 01:03:40] -rw-r--r--. 1 boinc boinc      2550 Oct 12 21:02 pandaJob.out
[2025-10-13 01:03:40] -rw-------. 1 boinc boinc    975528 Oct 12 21:03 agis_schedconf.cvmfs.json
[2025-10-13 01:03:40] drwx------. 5 boinc boinc      4096 Oct 12 21:03 pilot3
[2025-10-13 01:03:40] -rw-------. 1 boinc boinc 191890173 Oct 13 01:00 HITS.46676269._079270.pool.root.1
[2025-10-13 01:03:40] -rw-r--r--. 1 boinc boinc       531 Oct 13 01:00 boinc_task_state.xml
[2025-10-13 01:03:40] -rw-------. 1 boinc boinc      1018 Oct 13 01:01 memory_monitor_summary.json
[2025-10-13 01:03:40] -rw-------. 1 boinc boinc   1560580 Oct 13 01:01 agis_ddmendpoints.agis.ALL.json
[2025-10-13 01:03:40] -rw-------. 1 boinc boinc    458666 Oct 13 01:01 log.46676269._079270.job.log.tgz.1
[2025-10-13 01:03:40] -rw-------. 1 boinc boinc        95 Oct 13 01:03 pilot_heartbeat.json
[2025-10-13 01:03:40] -rw-------. 1 boinc boinc      7778 Oct 13 01:03 heartbeat.json
[2025-10-13 01:03:40] -rw-------. 1 boinc boinc       819 Oct 13 01:03 pilotlog.txt
[2025-10-13 01:03:40] -rw-------. 1 boinc boinc   1937943 Oct 13 01:03 log.46676269._079270.job.log.1
[2025-10-13 01:03:40] -rw-r--r--. 1 boinc boinc        28 Oct 13 01:03 wrapper_checkpoint.txt
[2025-10-13 01:03:40] -rw-------. 1 boinc boinc       357 Oct 13 01:03 output.list
[2025-10-13 01:03:40] -rw-r--r--. 1 boinc boinc       620 Oct 13 01:03 runtime_log
[2025-10-13 01:03:40] -rw-------. 1 boinc boinc   2416640 Oct 13 01:03 result.tar.gz
[2025-10-13 01:03:40] -rw-------. 1 boinc boinc       656 Oct 13 01:03 t6eLDmN8AS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmhyjNDm7QQGIm.diag
[2025-10-13 01:03:40] -rw-r--r--. 1 boinc boinc      8703 Oct 13 01:03 runtime_log.err
[2025-10-13 01:03:40] -rw-r--r--. 1 boinc boinc      8192 Oct 13 01:03 boinc_mmap_file
[2025-10-13 01:03:40] -rw-r--r--. 1 boinc boinc     20700 Oct 13 01:03 stderr.txt
[2025-10-13 01:03:40] HITS file was successfully produced:
[2025-10-13 01:03:40] -rw-------. 1 boinc boinc 191890173 Oct 13 01:00 shared/HITS.pool.root.1
[2025-10-13 01:03:40]  *** Contents of shared directory: ***
[2025-10-13 01:03:40] total 407916
[2025-10-13 01:03:40] -rw-r--r--. 2 boinc boinc 222802895 Oct 12 21:02 ATLAS.root_0
[2025-10-13 01:03:40] -rw-r--r--. 2 boinc boinc     15120 Oct 12 21:02 start_atlas.sh
[2025-10-13 01:03:40] -rw-r--r--. 2 boinc boinc    569679 Oct 12 21:02 input.tar.gz
[2025-10-13 01:03:40] -rw-------. 1 boinc boinc 191890173 Oct 13 01:00 HITS.pool.root.1
[2025-10-13 01:03:40] -rw-------. 1 boinc boinc   2416640 Oct 13 01:03 result.tar.gz
01:03:41 (3213): run_atlas exited; CPU time 54513.351551
01:03:41 (3213): called boinc_finish(0)

</stderr_txt>
]]>

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