Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
02:57:13 (3102728): wrapper (7.7.26015): starting
02:57:13 (3102728): wrapper: running run_atlas (--nthreads 3)
[2025-10-13 02:57:13] Arguments: --nthreads 3
[2025-10-13 02:57:13] Threads: 3
[2025-10-13 02:57:13] Checking for CVMFS
[2025-10-13 02:57:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 02:57:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 02:57:13] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 02:57:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 02:57:13] 2.9.2.0 1621947 4953 86736 151642 0 57 24323393 36864000 0 130560 0 3866721 99.987 298569 1170 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-10-13 02:57:13] CVMFS is ok
[2025-10-13 02:57:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 02:57:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 02:57:13] Further information can be found at the LHC@home message board.
[2025-10-13 02:57:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 02:57:13] Checking for apptainer binary...
[2025-10-13 02:57:13] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 02:57:13] Running /usr/bin/apptainer --version
[2025-10-13 02:57:13] apptainer version 1.4.1-1.1
[2025-10-13 02:57:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 02:57:13] thA305
[2025-10-13 02:57:13] apptainer works
[2025-10-13 02:57:13] Set ATHENA_PROC_NUMBER=3
[2025-10-13 02:57:13] Set ATHENA_CORE_NUMBER=3
[2025-10-13 02:57:13] Starting ATLAS job with PandaID=6839820674
[2025-10-13 02:57:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 04:24:31]  *** The last 200 lines of the pilot log: ***
[2025-10-13 04:24:31] 2025-10-13 02:23:47,315 | INFO     | [job] job monitor thread has finished
[2025-10-13 04:24:31] 2025-10-13 02:23:47,329 | INFO     | [payload] failed_post thread has finished
[2025-10-13 04:24:31] 2025-10-13 02:23:47,443 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 04:24:31] 2025-10-13 02:23:47,946 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 04:24:31] 2025-10-13 02:23:47,996 | INFO     | [data] control thread has finished
[2025-10-13 04:24:31] 2025-10-13 02:23:48,075 | INFO     | [payload] validate_post thread has finished
[2025-10-13 04:24:31] 2025-10-13 02:23:48,172 | INFO     | [data] copytool_in thread has finished
[2025-10-13 04:24:31] 2025-10-13 02:23:48,178 | INFO     | [payload] control thread has finished
[2025-10-13 04:24:31] 2025-10-13 02:23:48,307 | INFO     | [job] control thread has finished
[2025-10-13 04:24:31] 2025-10-13 02:23:48,576 | INFO     | [data] copytool_out thread has finished
[2025-10-13 04:24:31] 2025-10-13 02:23:48,718 | INFO     | [job] validate thread has finished
[2025-10-13 04:24:31] 2025-10-13 02:23:48,750 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 04:24:31] 2025-10-13 02:23:48,804 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 04:24:31] 2025-10-13 02:23:49,252 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 04:24:31] 2025-10-13 02:23:50,258 | INFO     | [job] queue monitor thread has finished
[2025-10-13 04:24:31] 2025-10-13 02:23:50,315 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 04:24:31] 2025-10-13 02:24:16,751 | INFO     | PID=3106449 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 04:24:31] 2025-10-13 02:24:16,752 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 04:24:31] 2025-10-13 02:24:16,752 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 04:24:31] 2025-10-13 02:24:16,752 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 04:24:31] 2025-10-13 02:24:24,908 | INFO     | [monitor] cgroup control has ended
[2025-10-13 04:24:31] 2025-10-13 02:24:26,260 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140603851634496)>', '<ExcThread(monitor, started 140602968618752)>']
[2025-10-13 04:24:31] 2025-10-13 02:24:26,805 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 04:24:31] 2025-10-13 02:24:26,806 | INFO     | [monitor] control thread has ended
[2025-10-13 04:24:31] 2025-10-13 02:24:31,286 | INFO     | all workflow threads have been joined
[2025-10-13 04:24:31] 2025-10-13 02:24:31,286 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 04:24:31] 2025-10-13 02:24:31,286 | INFO     | traces error code: 0
[2025-10-13 04:24:31] 2025-10-13 02:24:31,286 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 04:24:31] 2025-10-13 02:24:31,338 [wrapper] ==== pilot stdout END ====
[2025-10-13 04:24:31] 2025-10-13 02:24:31,341 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 04:24:31] 2025-10-13 02:24:31,343 [wrapper] pilotpid: 3106449
[2025-10-13 04:24:31] 2025-10-13 02:24:31,345 [wrapper] Pilot exit status: 0
[2025-10-13 04:24:31] 2025-10-13 02:24:31,352 [wrapper] pandaids: 6839820674
[2025-10-13 04:24:31] 2025-10-13 02:24:31,370 [wrapper] cleanup supervisor_pilot 3125012 3106450
[2025-10-13 04:24:31] 2025-10-13 02:24:31,373 [wrapper] Test setup, not cleaning
[2025-10-13 04:24:31] 2025-10-13 02:24:31,375 [wrapper] apfmon messages muted
[2025-10-13 04:24:31] 2025-10-13 02:24:31,377 [wrapper] ==== wrapper stdout END ====
[2025-10-13 04:24:31] 2025-10-13 02:24:31,380 [wrapper] ==== wrapper stderr END ====
[2025-10-13 04:24:31]  *** Error codes and diagnostics ***
[2025-10-13 04:24:31]     "exeErrorCode": 0,
[2025-10-13 04:24:31]     "exeErrorDiag": "",
[2025-10-13 04:24:31]     "pilotErrorCode": 0,
[2025-10-13 04:24:31]     "pilotErrorDiag": "",
[2025-10-13 04:24:31]  *** Listing of results directory ***
[2025-10-13 04:24:31] total 413168
[2025-10-13 04:24:31] -rw-r--r-- 1 boinc boinc    557409 Oct 12 10:37 pilot3.tar.gz
[2025-10-13 04:24:31] -rw-r--r-- 1 boinc boinc      5112 Oct 12 10:46 queuedata.json
[2025-10-13 04:24:31] -rwx------ 1 boinc boinc     36292 Oct 12 10:47 runpilot2-wrapper.sh
[2025-10-13 04:24:31] -rw-r--r-- 1 boinc boinc       100 Oct 13 02:57 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 04:24:31] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 02:57 run_atlas
[2025-10-13 04:24:31] -rw-r--r-- 1 boinc boinc       105 Oct 13 02:57 job.xml
[2025-10-13 04:24:31] -rw-r--r-- 2 boinc boinc 219355499 Oct 13 02:57 EVNT.46676267._000728.pool.root.1
[2025-10-13 04:24:31] -rw-r--r-- 2 boinc boinc    569688 Oct 13 02:57 input.tar.gz
[2025-10-13 04:24:31] -rw-r--r-- 2 boinc boinc     15120 Oct 13 02:57 start_atlas.sh
[2025-10-13 04:24:31] drwxrwx--x 2 boinc boinc      4096 Oct 13 02:57 shared
[2025-10-13 04:24:31] -rw-r--r-- 1 boinc boinc         0 Oct 13 02:57 boinc_setup_complete
[2025-10-13 04:24:31] -rw-r--r-- 1 boinc boinc      6439 Oct 13 02:57 init_data.xml
[2025-10-13 04:24:31] -rw-r--r-- 1 boinc boinc         0 Oct 13 02:57 boinc_lockfile
[2025-10-13 04:24:31] -rw-r--r-- 1 boinc boinc      2549 Oct 13 02:57 pandaJob.out
[2025-10-13 04:24:31] -rw------- 1 boinc boinc    975603 Oct 13 02:57 agis_schedconf.cvmfs.json
[2025-10-13 04:24:31] -rw------- 1 boinc boinc   1560580 Oct 13 02:57 agis_ddmendpoints.agis.ALL.json
[2025-10-13 04:24:31] drwx------ 5 boinc boinc      4096 Oct 13 02:57 pilot3
[2025-10-13 04:24:31] -rw------- 1 boinc boinc 197800099 Oct 13 04:23 HITS.46676269._074740.pool.root.1
[2025-10-13 04:24:31] -rw-r--r-- 1 boinc boinc       529 Oct 13 04:23 boinc_task_state.xml
[2025-10-13 04:24:31] -rw------- 1 boinc boinc      1021 Oct 13 04:23 memory_monitor_summary.json
[2025-10-13 04:24:31] -rw------- 1 boinc boinc    259726 Oct 13 04:23 log.46676269._074740.job.log.tgz.1
[2025-10-13 04:24:31] -rw------- 1 boinc boinc      7758 Oct 13 04:23 heartbeat.json
[2025-10-13 04:24:31] -rw-r--r-- 1 boinc boinc      8192 Oct 13 04:24 boinc_mmap_file
[2025-10-13 04:24:31] -rw-r--r-- 1 boinc boinc        27 Oct 13 04:24 wrapper_checkpoint.txt
[2025-10-13 04:24:31] -rw------- 1 boinc boinc        95 Oct 13 04:24 pilot_heartbeat.json
[2025-10-13 04:24:31] -rw------- 1 boinc boinc      4752 Oct 13 04:24 pilotlog.txt
[2025-10-13 04:24:31] -rw------- 1 boinc boinc    757986 Oct 13 04:24 log.46676269._074740.job.log.1
[2025-10-13 04:24:31] -rw------- 1 boinc boinc       357 Oct 13 04:24 output.list
[2025-10-13 04:24:31] -rw-r--r-- 1 boinc boinc       620 Oct 13 04:24 runtime_log
[2025-10-13 04:24:31] -rw------- 1 boinc boinc   1034240 Oct 13 04:24 result.tar.gz
[2025-10-13 04:24:31] -rw-r--r-- 1 boinc boinc      8777 Oct 13 04:24 runtime_log.err
[2025-10-13 04:24:31] -rw------- 1 boinc boinc       658 Oct 13 04:24 NwmMDmKv6R8n9Rq4apOajLDm4fhM0noT9bVof3QYDmhXTMDmTIWHTo.diag
[2025-10-13 04:24:31] -rw-r--r-- 1 boinc boinc      6336 Oct 13 04:24 stderr.txt
[2025-10-13 04:24:31] HITS file was successfully produced:
[2025-10-13 04:24:31] -rw------- 1 boinc boinc 197800099 Oct 13 04:23 shared/HITS.pool.root.1
[2025-10-13 04:24:31]  *** Contents of shared directory: ***
[2025-10-13 04:24:31] total 408980
[2025-10-13 04:24:31] -rw-r--r-- 2 boinc boinc 219355499 Oct 13 02:57 ATLAS.root_0
[2025-10-13 04:24:31] -rw-r--r-- 2 boinc boinc    569688 Oct 13 02:57 input.tar.gz
[2025-10-13 04:24:31] -rw-r--r-- 2 boinc boinc     15120 Oct 13 02:57 start_atlas.sh
[2025-10-13 04:24:31] -rw------- 1 boinc boinc 197800099 Oct 13 04:23 HITS.pool.root.1
[2025-10-13 04:24:31] -rw------- 1 boinc boinc   1034240 Oct 13 04:24 result.tar.gz
04:24:33 (3102728): run_atlas exited; CPU time 14962.500382
04:24:33 (3102728): called boinc_finish(0)

</stderr_txt>
]]>

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