Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:20:04 (30620): wrapper (7.7.26015): starting
05:20:04 (30620): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 05:20:04] Arguments: --nthreads 8
[2025-10-13 05:20:04] Threads: 8
[2025-10-13 05:20:04] Checking for CVMFS
[2025-10-13 05:20:05] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 05:20:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 05:20:06] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 05:20:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 05:20:07] 2.11.2.0 4673 108267 107284 151647 3 201 16617348 25165825 4585 130560 0 39240337 99.911 16421288 2638 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-10-13 05:20:07] CVMFS is ok
[2025-10-13 05:20:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 05:20:07] Checking for apptainer binary...
[2025-10-13 05:20:07] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 05:20:07] Running /usr/bin/apptainer --version
[2025-10-13 05:20:07] apptainer version 1.3.2-1.el7
[2025-10-13 05:20:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 05:20:20] cg-vwn293.simple-grid.lan
[2025-10-13 05:20:20] apptainer works
[2025-10-13 05:20:20] Set ATHENA_PROC_NUMBER=8
[2025-10-13 05:20:20] Set ATHENA_CORE_NUMBER=8
[2025-10-13 05:20:20] Starting ATLAS job with PandaID=6839868830
[2025-10-13 05:20:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 09:40:29]  *** The last 200 lines of the pilot log: ***
[2025-10-13 09:40:29] 2025-10-13 07:39:43,425 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 09:40:29] 2025-10-13 07:39:43,425 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 09:40:29] 2025-10-13 07:39:43,430 | INFO     | fitting pss+swap vs Time
[2025-10-13 09:40:29] 2025-10-13 07:39:43,431 | INFO     | sum of square deviations: 4394577280.5
[2025-10-13 09:40:29] 2025-10-13 07:39:43,451 | INFO     | sum of deviations: 45588019776.50004
[2025-10-13 09:40:29] 2025-10-13 07:39:43,451 | INFO     | mean x: 1760333674.5
[2025-10-13 09:40:29] 2025-10-13 07:39:43,451 | INFO     | mean y: 2464592.97107438
[2025-10-13 09:40:29] 2025-10-13 07:39:43,451 | INFO     | -- intersect: -18258706219.16547
[2025-10-13 09:40:29] 2025-10-13 07:39:43,452 | INFO     | intersect: -18258706219.16547
[2025-10-13 09:40:29] 2025-10-13 07:39:43,452 | INFO     | chi2: 6.25086909170589
[2025-10-13 09:40:29] 2025-10-13 07:39:43,452 | INFO     | sum of square deviations: 4127772278.0
[2025-10-13 09:40:29] 2025-10-13 07:39:43,454 | INFO     | sum of deviations: 60698527508.0
[2025-10-13 09:40:29] 2025-10-13 07:39:43,455 | INFO     | mean x: 1760333522.0
[2025-10-13 09:40:29] 2025-10-13 07:39:43,455 | INFO     | mean y: 2473076.2911392404
[2025-10-13 09:40:29] 2025-10-13 07:39:43,455 | INFO     | -- intersect: -25883076201.185627
[2025-10-13 09:40:29] 2025-10-13 07:39:43,455 | INFO     | intersect: -25883076201.185627
[2025-10-13 09:40:29] 2025-10-13 07:39:43,455 | INFO     | chi2: 5.531897177364328
[2025-10-13 09:40:29] 2025-10-13 07:39:43,455 | INFO     | current chi2=5.531897177364328 (change=11.501951229398578 %)
[2025-10-13 09:40:29] 2025-10-13 07:39:43,455 | INFO     | right removable region: 236
[2025-10-13 09:40:29] 2025-10-13 07:39:43,456 | INFO     | sum of square deviations: 4127772278.0
[2025-10-13 09:40:29] 2025-10-13 07:39:43,458 | INFO     | sum of deviations: -37048249167.0
[2025-10-13 09:40:29] 2025-10-13 07:39:43,458 | INFO     | mean x: 1760333827.0
[2025-10-13 09:40:29] 2025-10-13 07:39:43,458 | INFO     | mean y: 2511782.8734177216
[2025-10-13 09:40:29] 2025-10-13 07:39:43,458 | INFO     | -- intersect: 15802144574.485153
[2025-10-13 09:40:29] 2025-10-13 07:39:43,458 | INFO     | intersect: 15802144574.485153
[2025-10-13 09:40:29] 2025-10-13 07:39:43,459 | INFO     | chi2: 1.6974257500246772
[2025-10-13 09:40:29] 2025-10-13 07:39:43,459 | INFO     | current chi2=1.6974257500246772 (change=72.84496403425013 %)
[2025-10-13 09:40:29] 2025-10-13 07:39:43,459 | INFO     | sum of square deviations: 3871990738.0
[2025-10-13 09:40:29] 2025-10-13 07:39:43,461 | INFO     | sum of deviations: -63291060204.00001
[2025-10-13 09:40:29] 2025-10-13 07:39:43,461 | INFO     | mean x: 1760333979.5
[2025-10-13 09:40:29] 2025-10-13 07:39:43,461 | INFO     | mean y: 2527294.974137931
[2025-10-13 09:40:29] 2025-10-13 07:39:43,461 | INFO     | -- intersect: 28776719025.925896
[2025-10-13 09:40:29] 2025-10-13 07:39:43,461 | INFO     | intersect: 28776719025.925896
[2025-10-13 09:40:29] 2025-10-13 07:39:43,462 | INFO     | chi2: 0.9877093116885183
[2025-10-13 09:40:29] 2025-10-13 07:39:43,462 | INFO     | current chi2=0.9877093116885183 (change=41.81133921915825 %)
[2025-10-13 09:40:29] 2025-10-13 07:39:43,462 | INFO     | sum of square deviations: 3627000098.0
[2025-10-13 09:40:29] 2025-10-13 07:39:43,469 | INFO     | sum of deviations: -57078079236.99999
[2025-10-13 09:40:29] 2025-10-13 07:39:43,470 | INFO     | mean x: 1760334132.0
[2025-10-13 09:40:29] 2025-10-13 07:39:43,470 | INFO     | mean y: 2523419.1850220263
[2025-10-13 09:40:29] 2025-10-13 07:39:43,470 | INFO     | -- intersect: 27704891314.15595
[2025-10-13 09:40:29] 2025-10-13 07:39:43,470 | INFO     | intersect: 27704891314.15595
[2025-10-13 09:40:29] 2025-10-13 07:39:43,470 | INFO     | chi2: 0.9823769144498827
[2025-10-13 09:40:29] 2025-10-13 07:39:43,470 | INFO     | current chi2=0.9823769144498827 (change=0.5398751611969369 %)
[2025-10-13 09:40:29] 2025-10-13 07:39:43,470 | INFO     | left removable region: 30
[2025-10-13 09:40:29] 2025-10-13 07:39:43,471 | INFO     | sum of square deviations: 2710627567.5
[2025-10-13 09:40:29] 2025-10-13 07:39:43,472 | INFO     | sum of deviations: -17457559012.000008
[2025-10-13 09:40:29] 2025-10-13 07:39:43,472 | INFO     | mean x: 1760334406.5
[2025-10-13 09:40:29] 2025-10-13 07:39:43,473 | INFO     | mean y: 2517190.0582524273
[2025-10-13 09:40:29] 2025-10-13 07:39:43,473 | INFO     | -- intersect: 11339796479.470541
[2025-10-13 09:40:29] 2025-10-13 07:39:43,473 | INFO     | intersect: 11339796479.470541
[2025-10-13 09:40:29] 2025-10-13 07:39:43,473 | INFO     | chi2: 0.12260877651473304
[2025-10-13 09:40:29] 2025-10-13 07:39:43,473 | INFO     | -- intersect: 11339796479.470541
[2025-10-13 09:40:29] 2025-10-13 07:39:43,473 | INFO     | current memory leak: -6.44 B/s (using 206 data points, chi2=0.12)
[2025-10-13 09:40:29] 2025-10-13 07:39:43,474 | INFO     | could have reported an average CPU frequency of 1999 MHz (11 samples)
[2025-10-13 09:40:29] 2025-10-13 07:39:43,474 | INFO     | ..............................
[2025-10-13 09:40:29] 2025-10-13 07:39:43,481 | INFO     | . Timing measurements:
[2025-10-13 09:40:29] 2025-10-13 07:39:43,481 | INFO     | . get job = 0 s
[2025-10-13 09:40:29] 2025-10-13 07:39:43,481 | INFO     | . initial setup = 7 s
[2025-10-13 09:40:29] 2025-10-13 07:39:43,481 | INFO     | . payload setup = 138 s
[2025-10-13 09:40:29] 2025-10-13 07:39:43,481 | INFO     | . stage-in = 0 s
[2025-10-13 09:40:29] 2025-10-13 07:39:43,481 | INFO     | . payload execution = 14916 s
[2025-10-13 09:40:29] 2025-10-13 07:39:43,481 | INFO     | . stage-out = 7 s
[2025-10-13 09:40:29] 2025-10-13 07:39:43,481 | INFO     | . log creation = 1 s
[2025-10-13 09:40:29] 2025-10-13 07:39:43,481 | INFO     | ..............................
[2025-10-13 09:40:29] 2025-10-13 07:39:43,615 | INFO     | 
[2025-10-13 09:40:29] 2025-10-13 07:39:43,615 | INFO     | job summary report
[2025-10-13 09:40:29] 2025-10-13 07:39:43,615 | INFO     | --------------------------------------------------
[2025-10-13 09:40:29] 2025-10-13 07:39:43,615 | INFO     | PanDA job id: 6839868830
[2025-10-13 09:40:29] 2025-10-13 07:39:43,615 | INFO     | task id: 46676269
[2025-10-13 09:40:29] 2025-10-13 07:39:43,615 | INFO     | errors: (none)
[2025-10-13 09:40:29] 2025-10-13 07:39:43,615 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 09:40:29] 2025-10-13 07:39:43,616 | INFO     | pilot state: finished 
[2025-10-13 09:40:29] 2025-10-13 07:39:43,616 | INFO     | transexitcode: 0
[2025-10-13 09:40:29] 2025-10-13 07:39:43,616 | INFO     | exeerrorcode: 0
[2025-10-13 09:40:29] 2025-10-13 07:39:43,616 | INFO     | exeerrordiag: 
[2025-10-13 09:40:29] 2025-10-13 07:39:43,616 | INFO     | exitcode: 0
[2025-10-13 09:40:29] 2025-10-13 07:39:43,616 | INFO     | exitmsg: OK
[2025-10-13 09:40:29] 2025-10-13 07:39:43,616 | INFO     | cpuconsumptiontime: 55783 s
[2025-10-13 09:40:29] 2025-10-13 07:39:43,616 | INFO     | nevents: 400
[2025-10-13 09:40:29] 2025-10-13 07:39:43,616 | INFO     | neventsw: 0
[2025-10-13 09:40:29] 2025-10-13 07:39:43,616 | INFO     | pid: 8618
[2025-10-13 09:40:29] 2025-10-13 07:39:43,617 | INFO     | pgrp: 8618
[2025-10-13 09:40:29] 2025-10-13 07:39:43,617 | INFO     | corecount: 8
[2025-10-13 09:40:29] 2025-10-13 07:39:43,617 | INFO     | event service: False
[2025-10-13 09:40:29] 2025-10-13 07:39:43,617 | INFO     | sizes: {0: 2348686, 1: 2348885, 12: 2348885, 23: 2348913, 33: 2348941, 44: 2348997, 55: 2349153, 66: 2349181, 76: 2349209, 87: 2349265, 94: 2349555, 98: 2349863, 1
[2025-10-13 09:40:29] 2025-10-13 07:39:43,617 | INFO     | --------------------------------------------------
[2025-10-13 09:40:29] 2025-10-13 07:39:43,617 | INFO     | 
[2025-10-13 09:40:29] 2025-10-13 07:39:43,617 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2025-10-13 09:40:29] 2025-10-13 07:39:43,969 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 09:40:29] 2025-10-13 07:39:43,969 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 09:40:29] 2025-10-13 07:39:43,970 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 09:40:29] 2025-10-13 07:39:43,970 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 09:40:29] 2025-10-13 07:39:43,970 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 09:40:29] 2025-10-13 07:39:43,970 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 09:40:29] 2025-10-13 07:39:43,970 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 09:40:29] 2025-10-13 07:39:43,970 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 09:40:29] 2025-10-13 07:39:43,970 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 09:40:29] 2025-10-13 07:39:43,970 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 09:40:29] 2025-10-13 07:39:43,970 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 09:40:29] 2025-10-13 07:39:43,970 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 09:40:29] 2025-10-13 07:39:43,970 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 09:40:29] 2025-10-13 07:39:43,971 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 09:40:29] 2025-10-13 07:39:43,971 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 09:40:29] 2025-10-13 07:39:43,971 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 09:40:29] 2025-10-13 07:39:43,971 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 09:40:29] 2025-10-13 07:39:43,971 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 09:40:29] 2025-10-13 07:39:43,971 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 09:40:29] 2025-10-13 07:39:43,971 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 09:40:29] 2025-10-13 07:39:43,971 | INFO     | job 6839868830 has completed (purged errors)
[2025-10-13 09:40:29] 2025-10-13 07:39:43,972 | INFO     | overall cleanup function is called
[2025-10-13 09:40:29] 2025-10-13 07:39:44,981 | INFO     | --- collectZombieJob: --- 10, [8618]
[2025-10-13 09:40:29] 2025-10-13 07:39:44,981 | INFO     | zombie collector waiting for pid 8618
[2025-10-13 09:40:29] 2025-10-13 07:39:44,981 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 09:40:29] 2025-10-13 07:39:44,981 | INFO     | collected zombie processes
[2025-10-13 09:40:29] 2025-10-13 07:39:44,981 | INFO     | will attempt to kill all subprocesses of pid=8618
[2025-10-13 09:40:29] 2025-10-13 07:39:45,098 | INFO     | process IDs to be killed: [8618] (in reverse order)
[2025-10-13 09:40:29] 2025-10-13 07:39:45,815 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 09:40:29] 2025-10-13 07:39:45,816 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 09:40:29] 2025-10-13 07:39:45,819 | INFO     | did not find any defunct processes belonging to 8618
[2025-10-13 09:40:29] 2025-10-13 07:39:45,822 | INFO     | did not find any defunct processes belonging to 8618
[2025-10-13 09:40:29] 2025-10-13 07:39:45,823 | INFO     | ready for new job
[2025-10-13 09:40:29] 2025-10-13 07:39:45,823 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 09:40:29] 2025-10-13 07:39:45,825 | INFO     | ***************************************
[2025-10-13 09:40:29] 2025-10-13 07:39:45,825 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 09:40:29] 2025-10-13 07:39:45,826 | INFO     | ***************************************
[2025-10-13 09:40:29] 2025-10-13 07:39:45,826 | INFO     | 
[2025-10-13 09:40:29] 2025-10-13 07:39:45,826 | INFO     | pilot is running in a VM
[2025-10-13 09:40:29] 2025-10-13 07:39:45,826 | INFO     | architecture information:
[2025-10-13 09:40:29] 2025-10-13 07:39:45,837 | INFO     | executing command: cat /etc/os-release
[2025-10-13 09:40:29] 2025-10-13 07:39:46,130 | INFO     | cat /etc/os-release:
[2025-10-13 09:40:29] NAME="CentOS Linux"
[2025-10-13 09:40:29] VERSION="7 (Core)"
[2025-10-13 09:40:29] ID="centos"
[2025-10-13 09:40:29] ID_LIKE="rhel fedora"
[2025-10-13 09:40:29] VERSION_ID="7"
[2025-10-13 09:40:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 09:40:29] ANSI_COLOR="0;31"
[2025-10-13 09:40:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 09:40:29] HOME_URL="https://www.centos.org/"
[2025-10-13 09:40:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 09:40:29] 
[2025-10-13 09:40:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 09:40:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 09:40:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 09:40:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 09:40:29] 
[2025-10-13 09:40:29] 2025-10-13 07:39:46,130 | INFO     | ***************************************
[2025-10-13 09:40:29] 2025-10-13 07:39:46,634 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2025-10-13 09:40:29] 2025-10-13 07:39:46,804 | INFO     | sufficient remaining disk space (495346253824 B)
[2025-10-13 09:40:29] 2025-10-13 07:39:46,805 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 09:40:29] 2025-10-13 07:39:46,805 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 09:40:29] 2025-10-13 07:39:46,805 | INFO     | update_server=False
[2025-10-13 09:40:29] 2025-10-13 07:39:46,805 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 09:40:29] 2025-10-13 07:39:46,811 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 09:40:29] 2025-10-13 07:39:46,811 | INFO     | aborting loop
[2025-10-13 09:40:29] 2025-10-13 07:39:46,996 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 09:40:29] 2025-10-13 07:39:47,573 | INFO     | all data control threads have been joined
[2025-10-13 09:40:29] 2025-10-13 07:39:47,811 | INFO     | [job] retrieve thread has finished
[2025-10-13 09:40:29] 2025-10-13 07:39:47,817 | INFO     | [job] job monitor thread has finished
[2025-10-13 09:40:29] 2025-10-13 07:39:47,941 | INFO     | [payload] failed_post thread has finished
[2025-10-13 09:40:29] 2025-10-13 07:39:47,971 | INFO     | all payload control threads have been joined
[2025-10-13 09:40:29] 2025-10-13 07:39:47,985 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 09:40:29] 2025-10-13 07:39:47,994 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 09:40:29] 2025-10-13 07:39:48,142 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 09:40:29] 2025-10-13 07:39:48,291 | INFO     | all job control threads have been joined
[2025-10-13 09:40:29] 2025-10-13 07:39:48,464 | INFO     | [data] copytool_in thread has finished
[2025-10-13 09:40:29] 2025-10-13 07:39:48,579 | INFO     | [data] control thread has finished
[2025-10-13 09:40:29] 2025-10-13 07:39:48,629 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 09:40:29] 2025-10-13 07:39:48,695 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 09:40:29] 2025-10-13 07:39:48,977 | INFO     | [payload] control thread has finished
[2025-10-13 09:40:29] 2025-10-13 07:39:49,003 | INFO     | [data] copytool_out thread has finished
[2025-10-13 09:40:29] 2025-10-13 07:39:49,183 | INFO     | [payload] validate_post thread has finished
[2025-10-13 09:40:29] 2025-10-13 07:39:49,232 | INFO     | [job] validate thread has finished
[2025-10-13 09:40:29] 2025-10-13 07:39:49,248 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 09:40:29] 2025-10-13 07:39:49,297 | INFO     | [job] control thread has finished
[2025-10-13 09:40:29] 2025-10-13 07:39:49,635 | INFO     | [job] queue monitor thread has finished
[2025-10-13 09:40:29] 2025-10-13 07:39:51,995 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 09:40:29] 2025-10-13 07:40:15,496 | INFO     | PID=2031 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-13 09:40:29] 2025-10-13 07:40:15,496 | INFO     | .. there are 9 such processes running
[2025-10-13 09:40:29] 2025-10-13 07:40:15,497 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 09:40:29] 2025-10-13 07:40:15,497 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 09:40:29] 2025-10-13 07:40:15,497 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 09:40:29] 2025-10-13 07:40:18,587 | INFO     | [monitor] cgroup control has ended
[2025-10-13 09:40:29] 2025-10-13 07:40:19,203 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139639790495552)>', '<ExcThread(monitor, started 139639335655168)>']
[2025-10-13 09:40:29] 2025-10-13 07:40:19,521 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 09:40:29] 2025-10-13 07:40:19,521 | INFO     | [monitor] control thread has ended
[2025-10-13 09:40:29] 2025-10-13 07:40:24,229 | INFO     | all workflow threads have been joined
[2025-10-13 09:40:29] 2025-10-13 07:40:24,229 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 09:40:29] 2025-10-13 07:40:24,229 | INFO     | traces error code: 0
[2025-10-13 09:40:29] 2025-10-13 07:40:24,229 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 09:40:29] 2025-10-13 07:40:24,558 [wrapper] ==== pilot stdout END ====
[2025-10-13 09:40:29] 2025-10-13 07:40:24,644 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 09:40:29] 2025-10-13 07:40:24,687 [wrapper] pilotpid: 2031
[2025-10-13 09:40:29] 2025-10-13 07:40:24,739 [wrapper] Pilot exit status: 0
[2025-10-13 09:40:29] 2025-10-13 07:40:25,244 [wrapper] pandaids: 6839868830
[2025-10-13 09:40:29] 2025-10-13 07:40:26,145 [wrapper] cleanup supervisor_pilot 19443 2032
[2025-10-13 09:40:29] 2025-10-13 07:40:26,250 [wrapper] Test setup, not cleaning
[2025-10-13 09:40:29] 2025-10-13 07:40:26,279 [wrapper] apfmon messages muted
[2025-10-13 09:40:29] 2025-10-13 07:40:26,402 [wrapper] ==== wrapper stdout END ====
[2025-10-13 09:40:29] 2025-10-13 07:40:26,502 [wrapper] ==== wrapper stderr END ====
[2025-10-13 09:40:29]  *** Error codes and diagnostics ***
[2025-10-13 09:40:29]     "exeErrorCode": 0,
[2025-10-13 09:40:29]     "exeErrorDiag": "",
[2025-10-13 09:40:29]     "pilotErrorCode": 0,
[2025-10-13 09:40:29]     "pilotErrorDiag": "",
[2025-10-13 09:40:29]  *** Listing of results directory ***
[2025-10-13 09:40:29] total 418292
[2025-10-13 09:40:29] -rw-r--r--. 1 boinc boinc    557409 Oct 12 12:57 pilot3.tar.gz
[2025-10-13 09:40:29] -rw-r--r--. 1 boinc boinc      5112 Oct 12 13:06 queuedata.json
[2025-10-13 09:40:29] -rwx------. 1 boinc boinc     36292 Oct 12 13:07 runpilot2-wrapper.sh
[2025-10-13 09:40:29] -rw-r--r--. 1 boinc boinc       100 Oct 13 05:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 09:40:29] -rwxr-xr-x. 1 boinc boinc      7986 Oct 13 05:20 run_atlas
[2025-10-13 09:40:29] -rw-r--r--. 1 boinc boinc       105 Oct 13 05:20 job.xml
[2025-10-13 09:40:29] -rw-r--r--. 1 boinc boinc      6387 Oct 13 05:20 init_data.xml
[2025-10-13 09:40:29] -rw-r--r--. 2 boinc boinc 224130543 Oct 13 05:20 EVNT.46676267._003662.pool.root.1
[2025-10-13 09:40:29] -rw-r--r--. 2 boinc boinc     15120 Oct 13 05:20 start_atlas.sh
[2025-10-13 09:40:29] drwxrwx--x. 2 boinc boinc        68 Oct 13 05:20 shared
[2025-10-13 09:40:29] -rw-r--r--. 2 boinc boinc    569682 Oct 13 05:20 input.tar.gz
[2025-10-13 09:40:29] -rw-r--r--. 1 boinc boinc         0 Oct 13 05:20 boinc_lockfile
[2025-10-13 09:40:29] -rw-r--r--. 1 boinc boinc      2550 Oct 13 05:20 pandaJob.out
[2025-10-13 09:40:29] -rw-------. 1 boinc boinc    974373 Oct 13 05:23 agis_schedconf.cvmfs.json
[2025-10-13 09:40:29] drwx------. 5 boinc boinc      4096 Oct 13 05:23 pilot3
[2025-10-13 09:40:29] -rw-r--r--. 1 boinc boinc       531 Oct 13 09:36 boinc_task_state.xml
[2025-10-13 09:40:29] -rw-------. 1 boinc boinc 195274616 Oct 13 09:36 HITS.46676269._076779.pool.root.1
[2025-10-13 09:40:29] -rw-------. 1 boinc boinc      1015 Oct 13 09:37 memory_monitor_summary.json
[2025-10-13 09:40:29] -rw-------. 1 boinc boinc   1560580 Oct 13 09:38 agis_ddmendpoints.agis.ALL.json
[2025-10-13 09:40:29] -rw-------. 1 boinc boinc    470506 Oct 13 09:38 log.46676269._076779.job.log.tgz.1
[2025-10-13 09:40:29] -rw-------. 1 boinc boinc      7775 Oct 13 09:39 heartbeat.json
[2025-10-13 09:40:29] -rw-r--r--. 1 boinc boinc        28 Oct 13 09:40 wrapper_checkpoint.txt
[2025-10-13 09:40:29] -rw-r--r--. 1 boinc boinc      8192 Oct 13 09:40 boinc_mmap_file
[2025-10-13 09:40:29] -rw-------. 1 boinc boinc        95 Oct 13 09:40 pilot_heartbeat.json
[2025-10-13 09:40:29] -rw-------. 1 boinc boinc      4883 Oct 13 09:40 pilotlog.txt
[2025-10-13 09:40:29] -rw-------. 1 boinc boinc   2049327 Oct 13 09:40 log.46676269._076779.job.log.1
[2025-10-13 09:40:29] -rw-------. 1 boinc boinc       357 Oct 13 09:40 output.list
[2025-10-13 09:40:29] -rw-r--r--. 1 boinc boinc       620 Oct 13 09:40 runtime_log
[2025-10-13 09:40:29] -rw-------. 1 boinc boinc   2539520 Oct 13 09:40 result.tar.gz
[2025-10-13 09:40:29] -rw-r--r--. 1 boinc boinc      8703 Oct 13 09:40 runtime_log.err
[2025-10-13 09:40:29] -rw-------. 1 boinc boinc       656 Oct 13 09:40 2bEODm658R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmAajNDmIWwhEm.diag
[2025-10-13 09:40:29] -rw-r--r--. 1 boinc boinc     20603 Oct 13 09:40 stderr.txt
[2025-10-13 09:40:29] HITS file was successfully produced:
[2025-10-13 09:40:29] -rw-------. 1 boinc boinc 195274616 Oct 13 09:36 shared/HITS.pool.root.1
[2025-10-13 09:40:29]  *** Contents of shared directory: ***
[2025-10-13 09:40:29] total 412636
[2025-10-13 09:40:29] -rw-r--r--. 2 boinc boinc 224130543 Oct 13 05:20 ATLAS.root_0
[2025-10-13 09:40:29] -rw-r--r--. 2 boinc boinc     15120 Oct 13 05:20 start_atlas.sh
[2025-10-13 09:40:29] -rw-r--r--. 2 boinc boinc    569682 Oct 13 05:20 input.tar.gz
[2025-10-13 09:40:29] -rw-------. 1 boinc boinc 195274616 Oct 13 09:36 HITS.pool.root.1
[2025-10-13 09:40:29] -rw-------. 1 boinc boinc   2539520 Oct 13 09:40 result.tar.gz
09:40:30 (30620): run_atlas exited; CPU time 55992.980376
09:40:30 (30620): called boinc_finish(0)

</stderr_txt>
]]>

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