Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:41:02 (405): wrapper (7.7.26015): starting
05:41:02 (405): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 05:41:02] Arguments: --nthreads 8
[2025-10-13 05:41:02] Threads: 8
[2025-10-13 05:41:02] Checking for CVMFS
[2025-10-13 05:41:03] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 05:41:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 05:41:04] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 05:41:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 05:41:05] 2.11.2.0 22738 221336 136348 151647 0 60 13343403 25165825 4632 130560 0 120141720 99.882 65515899 3161 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-10-13 05:41:05] CVMFS is ok
[2025-10-13 05:41:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 05:41:05] Checking for apptainer binary...
[2025-10-13 05:41:05] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 05:41:05] Running /usr/bin/apptainer --version
[2025-10-13 05:41:05] apptainer version 1.3.2-1.el7
[2025-10-13 05:41:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 05:41:21] cg-vwn395.simple-grid.lan
[2025-10-13 05:41:21] apptainer works
[2025-10-13 05:41:21] Set ATHENA_PROC_NUMBER=8
[2025-10-13 05:41:21] Set ATHENA_CORE_NUMBER=8
[2025-10-13 05:41:21] Starting ATLAS job with PandaID=6839591545
[2025-10-13 05:41:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 10:05:37]  *** The last 200 lines of the pilot log: ***
[2025-10-13 10:05:37] 2025-10-13 08:04:27,863 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 10:05:37] 2025-10-13 08:04:27,872 | INFO     | fitting pss+swap vs Time
[2025-10-13 10:05:37] 2025-10-13 08:04:27,873 | INFO     | sum of square deviations: 4616114457.5
[2025-10-13 10:05:37] 2025-10-13 08:04:27,875 | INFO     | sum of deviations: 80875215718.49998
[2025-10-13 10:05:37] 2025-10-13 08:04:27,875 | INFO     | mean x: 1760335061.5
[2025-10-13 10:05:37] 2025-10-13 08:04:27,876 | INFO     | mean y: 2445393.963414634
[2025-10-13 10:05:37] 2025-10-13 08:04:27,876 | INFO     | -- intersect: -30838964442.471832
[2025-10-13 10:05:37] 2025-10-13 08:04:27,876 | INFO     | intersect: -30838964442.471832
[2025-10-13 10:05:37] 2025-10-13 08:04:27,876 | INFO     | chi2: 5.543900676758058
[2025-10-13 10:05:37] 2025-10-13 08:04:27,877 | INFO     | sum of square deviations: 4340323240.0
[2025-10-13 10:05:37] 2025-10-13 08:04:27,879 | INFO     | sum of deviations: 95280183298.0
[2025-10-13 10:05:37] 2025-10-13 08:04:27,879 | INFO     | mean x: 1760334909.0
[2025-10-13 10:05:37] 2025-10-13 08:04:27,879 | INFO     | mean y: 2453210.651452282
[2025-10-13 10:05:37] 2025-10-13 08:04:27,879 | INFO     | -- intersect: -38640989574.8191
[2025-10-13 10:05:37] 2025-10-13 08:04:27,879 | INFO     | intersect: -38640989574.8191
[2025-10-13 10:05:37] 2025-10-13 08:04:27,880 | INFO     | chi2: 4.812252835589766
[2025-10-13 10:05:37] 2025-10-13 08:04:27,880 | INFO     | current chi2=4.812252835589766 (change=13.197347568574088 %)
[2025-10-13 10:05:37] 2025-10-13 08:04:27,880 | INFO     | right removable region: 240
[2025-10-13 10:05:37] 2025-10-13 08:04:27,881 | INFO     | sum of square deviations: 4340323240.0
[2025-10-13 10:05:37] 2025-10-13 08:04:27,882 | INFO     | sum of deviations: 529555700.99998283
[2025-10-13 10:05:37] 2025-10-13 08:04:27,883 | INFO     | mean x: 1760335214.0
[2025-10-13 10:05:37] 2025-10-13 08:04:27,883 | INFO     | mean y: 2489761.8340248964
[2025-10-13 10:05:37] 2025-10-13 08:04:27,883 | INFO     | -- intersect: -212285842.8153479
[2025-10-13 10:05:37] 2025-10-13 08:04:27,883 | INFO     | intersect: -212285842.8153479
[2025-10-13 10:05:37] 2025-10-13 08:04:27,883 | INFO     | chi2: 1.375058541896938
[2025-10-13 10:05:37] 2025-10-13 08:04:27,883 | INFO     | current chi2=1.375058541896938 (change=75.19691238947233 %)
[2025-10-13 10:05:37] 2025-10-13 08:04:27,884 | INFO     | sum of square deviations: 4075741535.0
[2025-10-13 10:05:37] 2025-10-13 08:04:27,886 | INFO     | sum of deviations: -21501216316.000004
[2025-10-13 10:05:37] 2025-10-13 08:04:27,886 | INFO     | mean x: 1760335366.5
[2025-10-13 10:05:37] 2025-10-13 08:04:27,886 | INFO     | mean y: 2502343.838983051
[2025-10-13 10:05:37] 2025-10-13 08:04:27,886 | INFO     | -- intersect: 9288996882.021627
[2025-10-13 10:05:37] 2025-10-13 08:04:27,886 | INFO     | intersect: 9288996882.021627
[2025-10-13 10:05:37] 2025-10-13 08:04:27,887 | INFO     | chi2: 0.8679944886470845
[2025-10-13 10:05:37] 2025-10-13 08:04:27,887 | INFO     | current chi2=0.8679944886470845 (change=36.875815668934514 %)
[2025-10-13 10:05:37] 2025-10-13 08:04:27,887 | INFO     | sum of square deviations: 3822136780.0
[2025-10-13 10:05:37] 2025-10-13 08:04:27,889 | INFO     | sum of deviations: -16323059479.0
[2025-10-13 10:05:37] 2025-10-13 08:04:27,894 | INFO     | mean x: 1760335519.0
[2025-10-13 10:05:37] 2025-10-13 08:04:27,895 | INFO     | mean y: 2499206.458874459
[2025-10-13 10:05:37] 2025-10-13 08:04:27,895 | INFO     | -- intersect: 7520299597.588084
[2025-10-13 10:05:37] 2025-10-13 08:04:27,895 | INFO     | intersect: 7520299597.588084
[2025-10-13 10:05:37] 2025-10-13 08:04:27,895 | INFO     | chi2: 0.8451910609787356
[2025-10-13 10:05:37] 2025-10-13 08:04:27,895 | INFO     | current chi2=0.8451910609787356 (change=2.627139684249821 %)
[2025-10-13 10:05:37] 2025-10-13 08:04:27,895 | INFO     | left removable region: 30
[2025-10-13 10:05:37] 2025-10-13 08:04:27,896 | INFO     | sum of square deviations: 2871616632.5
[2025-10-13 10:05:37] 2025-10-13 08:04:27,898 | INFO     | sum of deviations: 6229950648.499997
[2025-10-13 10:05:37] 2025-10-13 08:04:27,898 | INFO     | mean x: 1760335793.5
[2025-10-13 10:05:37] 2025-10-13 08:04:27,898 | INFO     | mean y: 2504064.242857143
[2025-10-13 10:05:37] 2025-10-13 08:04:27,898 | INFO     | -- intersect: -3816531176.80375
[2025-10-13 10:05:37] 2025-10-13 08:04:27,898 | INFO     | intersect: -3816531176.80375
[2025-10-13 10:05:37] 2025-10-13 08:04:27,899 | INFO     | chi2: 0.0008885453478092658
[2025-10-13 10:05:37] 2025-10-13 08:04:27,899 | INFO     | -- intersect: -3816531176.80375
[2025-10-13 10:05:37] 2025-10-13 08:04:27,899 | INFO     | current memory leak: 2.17 B/s (using 210 data points, chi2=0.00)
[2025-10-13 10:05:37] 2025-10-13 08:04:27,900 | INFO     | could have reported an average CPU frequency of 1999 MHz (11 samples)
[2025-10-13 10:05:37] 2025-10-13 08:04:27,900 | INFO     | ..............................
[2025-10-13 10:05:37] 2025-10-13 08:04:27,900 | INFO     | . Timing measurements:
[2025-10-13 10:05:37] 2025-10-13 08:04:27,900 | INFO     | . get job = 0 s
[2025-10-13 10:05:37] 2025-10-13 08:04:27,900 | INFO     | . initial setup = 7 s
[2025-10-13 10:05:37] 2025-10-13 08:04:27,900 | INFO     | . payload setup = 133 s
[2025-10-13 10:05:37] 2025-10-13 08:04:27,900 | INFO     | . stage-in = 0 s
[2025-10-13 10:05:37] 2025-10-13 08:04:27,900 | INFO     | . payload execution = 15135 s
[2025-10-13 10:05:37] 2025-10-13 08:04:27,900 | INFO     | . stage-out = 3 s
[2025-10-13 10:05:37] 2025-10-13 08:04:27,900 | INFO     | . log creation = 1 s
[2025-10-13 10:05:37] 2025-10-13 08:04:27,901 | INFO     | ..............................
[2025-10-13 10:05:37] 2025-10-13 08:04:28,035 | INFO     | time since job start (15565s) is within the limit (172800.0s)
[2025-10-13 10:05:37] 2025-10-13 08:04:28,047 | INFO     | 
[2025-10-13 10:05:37] 2025-10-13 08:04:28,047 | INFO     | job summary report
[2025-10-13 10:05:37] 2025-10-13 08:04:28,047 | INFO     | --------------------------------------------------
[2025-10-13 10:05:37] 2025-10-13 08:04:28,048 | INFO     | PanDA job id: 6839591545
[2025-10-13 10:05:37] 2025-10-13 08:04:28,048 | INFO     | task id: 46676269
[2025-10-13 10:05:37] 2025-10-13 08:04:28,048 | INFO     | errors: (none)
[2025-10-13 10:05:37] 2025-10-13 08:04:28,048 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 10:05:37] 2025-10-13 08:04:28,048 | INFO     | pilot state: finished 
[2025-10-13 10:05:37] 2025-10-13 08:04:28,048 | INFO     | transexitcode: 0
[2025-10-13 10:05:37] 2025-10-13 08:04:28,048 | INFO     | exeerrorcode: 0
[2025-10-13 10:05:37] 2025-10-13 08:04:28,048 | INFO     | exeerrordiag: 
[2025-10-13 10:05:37] 2025-10-13 08:04:28,048 | INFO     | exitcode: 0
[2025-10-13 10:05:37] 2025-10-13 08:04:28,049 | INFO     | exitmsg: OK
[2025-10-13 10:05:37] 2025-10-13 08:04:28,049 | INFO     | cpuconsumptiontime: 57658 s
[2025-10-13 10:05:37] 2025-10-13 08:04:28,049 | INFO     | nevents: 400
[2025-10-13 10:05:37] 2025-10-13 08:04:28,049 | INFO     | neventsw: 0
[2025-10-13 10:05:37] 2025-10-13 08:04:28,049 | INFO     | pid: 10814
[2025-10-13 10:05:37] 2025-10-13 08:04:28,049 | INFO     | pgrp: 10814
[2025-10-13 10:05:37] 2025-10-13 08:04:28,049 | INFO     | corecount: 8
[2025-10-13 10:05:37] 2025-10-13 08:04:28,049 | INFO     | event service: False
[2025-10-13 10:05:37] 2025-10-13 08:04:28,049 | INFO     | sizes: {0: 2348029, 1: 2348885, 2: 2348913, 12: 2348913, 23: 2348941, 34: 2348969, 45: 2349125, 55: 2349153, 66: 2349181, 77: 2349209, 88: 2349835, 98: 2349835, 15
[2025-10-13 10:05:37] 2025-10-13 08:04:28,049 | INFO     | --------------------------------------------------
[2025-10-13 10:05:37] 2025-10-13 08:04:28,050 | INFO     | 
[2025-10-13 10:05:37] 2025-10-13 08:04:28,050 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2025-10-13 10:05:37] 2025-10-13 08:04:28,463 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 10:05:37] 2025-10-13 08:04:28,463 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 10:05:37] 2025-10-13 08:04:28,463 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 10:05:37] 2025-10-13 08:04:28,463 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 10:05:37] 2025-10-13 08:04:28,463 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 10:05:37] 2025-10-13 08:04:28,464 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 10:05:37] 2025-10-13 08:04:28,464 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 10:05:37] 2025-10-13 08:04:28,464 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 10:05:37] 2025-10-13 08:04:28,464 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 10:05:37] 2025-10-13 08:04:28,464 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 10:05:37] 2025-10-13 08:04:28,464 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 10:05:37] 2025-10-13 08:04:28,464 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 10:05:37] 2025-10-13 08:04:28,464 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 10:05:37] 2025-10-13 08:04:28,464 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 10:05:37] 2025-10-13 08:04:28,465 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 10:05:37] 2025-10-13 08:04:28,465 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 10:05:37] 2025-10-13 08:04:28,465 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 10:05:37] 2025-10-13 08:04:28,465 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 10:05:37] 2025-10-13 08:04:28,465 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 10:05:37] 2025-10-13 08:04:28,466 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 10:05:37] 2025-10-13 08:04:28,466 | INFO     | job 6839591545 has completed (purged errors)
[2025-10-13 10:05:37] 2025-10-13 08:04:28,466 | INFO     | overall cleanup function is called
[2025-10-13 10:05:37] 2025-10-13 08:04:29,481 | INFO     | --- collectZombieJob: --- 10, [10814]
[2025-10-13 10:05:37] 2025-10-13 08:04:29,481 | INFO     | zombie collector waiting for pid 10814
[2025-10-13 10:05:37] 2025-10-13 08:04:29,482 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 10:05:37] 2025-10-13 08:04:29,482 | INFO     | collected zombie processes
[2025-10-13 10:05:37] 2025-10-13 08:04:29,482 | INFO     | will attempt to kill all subprocesses of pid=10814
[2025-10-13 10:05:37] 2025-10-13 08:04:29,593 | INFO     | process IDs to be killed: [10814] (in reverse order)
[2025-10-13 10:05:37] 2025-10-13 08:04:30,171 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 10:05:37] 2025-10-13 08:04:30,171 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 10:05:37] 2025-10-13 08:04:30,176 | INFO     | did not find any defunct processes belonging to 10814
[2025-10-13 10:05:37] 2025-10-13 08:04:30,179 | INFO     | did not find any defunct processes belonging to 10814
[2025-10-13 10:05:37] 2025-10-13 08:04:30,180 | INFO     | ready for new job
[2025-10-13 10:05:37] 2025-10-13 08:04:30,180 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 10:05:37] 2025-10-13 08:04:30,182 | INFO     | ***************************************
[2025-10-13 10:05:37] 2025-10-13 08:04:30,182 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 10:05:37] 2025-10-13 08:04:30,183 | INFO     | ***************************************
[2025-10-13 10:05:37] 2025-10-13 08:04:30,183 | INFO     | 
[2025-10-13 10:05:37] 2025-10-13 08:04:30,183 | INFO     | pilot is running in a VM
[2025-10-13 10:05:37] 2025-10-13 08:04:30,184 | INFO     | architecture information:
[2025-10-13 10:05:37] 2025-10-13 08:04:30,196 | INFO     | executing command: cat /etc/os-release
[2025-10-13 10:05:37] 2025-10-13 08:04:30,451 | INFO     | cat /etc/os-release:
[2025-10-13 10:05:37] NAME="CentOS Linux"
[2025-10-13 10:05:37] VERSION="7 (Core)"
[2025-10-13 10:05:37] ID="centos"
[2025-10-13 10:05:37] ID_LIKE="rhel fedora"
[2025-10-13 10:05:37] VERSION_ID="7"
[2025-10-13 10:05:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 10:05:37] ANSI_COLOR="0;31"
[2025-10-13 10:05:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 10:05:37] HOME_URL="https://www.centos.org/"
[2025-10-13 10:05:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 10:05:37] 
[2025-10-13 10:05:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 10:05:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 10:05:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 10:05:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 10:05:37] 
[2025-10-13 10:05:37] 2025-10-13 08:04:30,451 | INFO     | ***************************************
[2025-10-13 10:05:37] 2025-10-13 08:04:30,953 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2025-10-13 10:05:37] 2025-10-13 08:04:31,180 | INFO     | sufficient remaining disk space (494619590656 B)
[2025-10-13 10:05:37] 2025-10-13 08:04:31,180 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 10:05:37] 2025-10-13 08:04:31,180 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 10:05:37] 2025-10-13 08:04:31,180 | INFO     | update_server=False
[2025-10-13 10:05:37] 2025-10-13 08:04:31,181 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 10:05:37] 2025-10-13 08:04:31,189 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 10:05:37] 2025-10-13 08:04:31,307 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 10:05:37] 2025-10-13 08:04:31,308 | INFO     | aborting loop
[2025-10-13 10:05:37] 2025-10-13 08:04:31,786 | INFO     | all job control threads have been joined
[2025-10-13 10:05:37] 2025-10-13 08:04:32,001 | INFO     | all data control threads have been joined
[2025-10-13 10:05:37] 2025-10-13 08:04:32,112 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 10:05:37] 2025-10-13 08:04:32,186 | INFO     | [job] retrieve thread has finished
[2025-10-13 10:05:37] 2025-10-13 08:04:32,282 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 10:05:37] 2025-10-13 08:04:32,311 | INFO     | [data] copytool_in thread has finished
[2025-10-13 10:05:37] 2025-10-13 08:04:32,312 | INFO     | [job] job monitor thread has finished
[2025-10-13 10:05:37] 2025-10-13 08:04:32,407 | INFO     | all payload control threads have been joined
[2025-10-13 10:05:37] 2025-10-13 08:04:32,584 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 10:05:37] 2025-10-13 08:04:32,792 | INFO     | [job] control thread has finished
[2025-10-13 10:05:37] 2025-10-13 08:04:32,953 | INFO     | [payload] failed_post thread has finished
[2025-10-13 10:05:37] 2025-10-13 08:04:32,982 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 10:05:37] 2025-10-13 08:04:33,007 | INFO     | [data] control thread has finished
[2025-10-13 10:05:37] 2025-10-13 08:04:33,061 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 10:05:37] 2025-10-13 08:04:33,077 | INFO     | [job] validate thread has finished
[2025-10-13 10:05:37] 2025-10-13 08:04:33,196 | INFO     | [data] copytool_out thread has finished
[2025-10-13 10:05:37] 2025-10-13 08:04:33,252 | INFO     | [payload] validate_post thread has finished
[2025-10-13 10:05:37] 2025-10-13 08:04:33,413 | INFO     | [payload] control thread has finished
[2025-10-13 10:05:37] 2025-10-13 08:04:33,686 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 10:05:37] 2025-10-13 08:04:34,068 | INFO     | [job] queue monitor thread has finished
[2025-10-13 10:05:37] 2025-10-13 08:04:36,121 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 10:05:37] 2025-10-13 08:05:01,213 | INFO     | PID=4245 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-13 10:05:37] 2025-10-13 08:05:01,213 | INFO     | .. there are 9 such processes running
[2025-10-13 10:05:37] 2025-10-13 08:05:01,214 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 10:05:37] 2025-10-13 08:05:01,214 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 10:05:37] 2025-10-13 08:05:01,214 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 10:05:37] 2025-10-13 08:05:29,467 | INFO     | [monitor] cgroup control has ended
[2025-10-13 10:05:37] 2025-10-13 08:05:29,627 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140357391091520)>', '<ExcThread(monitor, started 140356494546688)>']
[2025-10-13 10:05:37] 2025-10-13 08:05:30,386 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 10:05:37] 2025-10-13 08:05:30,386 | INFO     | [monitor] control thread has ended
[2025-10-13 10:05:37] 2025-10-13 08:05:34,653 | INFO     | all workflow threads have been joined
[2025-10-13 10:05:37] 2025-10-13 08:05:34,653 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 10:05:37] 2025-10-13 08:05:34,654 | INFO     | traces error code: 0
[2025-10-13 10:05:37] 2025-10-13 08:05:34,654 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 10:05:37] 2025-10-13 08:05:34,990 [wrapper] ==== pilot stdout END ====
[2025-10-13 10:05:37] 2025-10-13 08:05:35,117 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 10:05:37] 2025-10-13 08:05:35,193 [wrapper] pilotpid: 4245
[2025-10-13 10:05:37] 2025-10-13 08:05:35,331 [wrapper] Pilot exit status: 0
[2025-10-13 10:05:37] 2025-10-13 08:05:35,770 [wrapper] pandaids: 6839591545
[2025-10-13 10:05:37] 2025-10-13 08:05:36,168 [wrapper] cleanup supervisor_pilot  5330 4246
[2025-10-13 10:05:37] 2025-10-13 08:05:36,214 [wrapper] Test setup, not cleaning
[2025-10-13 10:05:37] 2025-10-13 08:05:36,262 [wrapper] apfmon messages muted
[2025-10-13 10:05:37] 2025-10-13 08:05:36,301 [wrapper] ==== wrapper stdout END ====
[2025-10-13 10:05:37] 2025-10-13 08:05:36,341 [wrapper] ==== wrapper stderr END ====
[2025-10-13 10:05:37]  *** Error codes and diagnostics ***
[2025-10-13 10:05:37]     "exeErrorCode": 0,
[2025-10-13 10:05:37]     "exeErrorDiag": "",
[2025-10-13 10:05:37]     "pilotErrorCode": 0,
[2025-10-13 10:05:37]     "pilotErrorDiag": "",
[2025-10-13 10:05:37]  *** Listing of results directory ***
[2025-10-13 10:05:37] total 420196
[2025-10-13 10:05:37] -rw-r--r--. 1 boinc boinc    557409 Oct 12 08:14 pilot3.tar.gz
[2025-10-13 10:05:37] -rwx------. 1 boinc boinc     36292 Oct 12 08:33 runpilot2-wrapper.sh
[2025-10-13 10:05:37] -rw-r--r--. 1 boinc boinc      5112 Oct 12 08:33 queuedata.json
[2025-10-13 10:05:37] -rw-r--r--. 1 boinc boinc       100 Oct 13 05:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 10:05:37] -rwxr-xr-x. 1 boinc boinc      7986 Oct 13 05:41 run_atlas
[2025-10-13 10:05:37] -rw-r--r--. 1 boinc boinc       105 Oct 13 05:41 job.xml
[2025-10-13 10:05:37] -rw-r--r--. 1 boinc boinc      6388 Oct 13 05:41 init_data.xml
[2025-10-13 10:05:37] -rw-r--r--. 2 boinc boinc 219089781 Oct 13 05:41 EVNT.46676267._004515.pool.root.1
[2025-10-13 10:05:37] -rw-r--r--. 2 boinc boinc     15120 Oct 13 05:41 start_atlas.sh
[2025-10-13 10:05:37] drwxrwx--x. 2 boinc boinc        68 Oct 13 05:41 shared
[2025-10-13 10:05:37] -rw-r--r--. 2 boinc boinc    569678 Oct 13 05:41 input.tar.gz
[2025-10-13 10:05:37] -rw-r--r--. 1 boinc boinc         0 Oct 13 05:41 boinc_lockfile
[2025-10-13 10:05:37] -rw-r--r--. 1 boinc boinc      2550 Oct 13 05:41 pandaJob.out
[2025-10-13 10:05:37] -rw-------. 1 boinc boinc    974373 Oct 13 05:44 agis_schedconf.cvmfs.json
[2025-10-13 10:05:37] drwx------. 5 boinc boinc      4096 Oct 13 05:45 pilot3
[2025-10-13 10:05:37] -rw-------. 1 boinc boinc 202168903 Oct 13 10:01 HITS.46676269._072809.pool.root.1
[2025-10-13 10:05:37] -rw-r--r--. 1 boinc boinc       531 Oct 13 10:01 boinc_task_state.xml
[2025-10-13 10:05:37] -rw-------. 1 boinc boinc      1013 Oct 13 10:02 memory_monitor_summary.json
[2025-10-13 10:05:37] -rw-------. 1 boinc boinc   1560580 Oct 13 10:02 agis_ddmendpoints.agis.ALL.json
[2025-10-13 10:05:37] -rw-------. 1 boinc boinc    478943 Oct 13 10:02 log.46676269._072809.job.log.tgz.1
[2025-10-13 10:05:37] -rw-------. 1 boinc boinc      7777 Oct 13 10:04 heartbeat.json
[2025-10-13 10:05:37] -rw-------. 1 boinc boinc        95 Oct 13 10:05 pilot_heartbeat.json
[2025-10-13 10:05:37] -rw-r--r--. 1 boinc boinc      8192 Oct 13 10:05 boinc_mmap_file
[2025-10-13 10:05:37] -rw-r--r--. 1 boinc boinc        28 Oct 13 10:05 wrapper_checkpoint.txt
[2025-10-13 10:05:37] -rw-------. 1 boinc boinc      4883 Oct 13 10:05 pilotlog.txt
[2025-10-13 10:05:37] -rw-------. 1 boinc boinc   2087822 Oct 13 10:05 log.46676269._072809.job.log.1
[2025-10-13 10:05:37] -rw-------. 1 boinc boinc       357 Oct 13 10:05 output.list
[2025-10-13 10:05:37] -rw-r--r--. 1 boinc boinc       620 Oct 13 10:05 runtime_log
[2025-10-13 10:05:37] -rw-------. 1 boinc boinc   2590720 Oct 13 10:05 result.tar.gz
[2025-10-13 10:05:37] -rw-r--r--. 1 boinc boinc      8703 Oct 13 10:05 runtime_log.err
[2025-10-13 10:05:37] -rw-------. 1 boinc boinc       656 Oct 13 10:05 E1eMDm3o4R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmmsiNDmiqGOvm.diag
[2025-10-13 10:05:37] -rw-r--r--. 1 boinc boinc     20618 Oct 13 10:05 stderr.txt
[2025-10-13 10:05:37] HITS file was successfully produced:
[2025-10-13 10:05:37] -rw-------. 1 boinc boinc 202168903 Oct 13 10:01 shared/HITS.pool.root.1
[2025-10-13 10:05:37]  *** Contents of shared directory: ***
[2025-10-13 10:05:37] total 414496
[2025-10-13 10:05:37] -rw-r--r--. 2 boinc boinc 219089781 Oct 13 05:41 ATLAS.root_0
[2025-10-13 10:05:37] -rw-r--r--. 2 boinc boinc     15120 Oct 13 05:41 start_atlas.sh
[2025-10-13 10:05:37] -rw-r--r--. 2 boinc boinc    569678 Oct 13 05:41 input.tar.gz
[2025-10-13 10:05:37] -rw-------. 1 boinc boinc 202168903 Oct 13 10:01 HITS.pool.root.1
[2025-10-13 10:05:37] -rw-------. 1 boinc boinc   2590720 Oct 13 10:05 result.tar.gz
10:05:39 (405): run_atlas exited; CPU time 57872.879593
10:05:39 (405): called boinc_finish(0)

</stderr_txt>
]]>

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