Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:41:12 (2286413): wrapper (7.7.26015): starting
10:41:12 (2286413): wrapper: running run_atlas (--nthreads 11)
[2025-10-12 10:41:12] Arguments: --nthreads 11
[2025-10-12 10:41:12] Threads: 11
[2025-10-12 10:41:12] Checking for CVMFS
[2025-10-12 10:41:12] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 10:41:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 10:41:12] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 10:41:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 10:41:34] 2.13.2.0 79137 135035 632172 151623 2 277 21592746 40960001 67917 16776704 0 464023022 99.817 219544845 32319 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 10:41:34] CVMFS is ok
[2025-10-12 10:41:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 10:41:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 10:41:34] Further information can be found at the LHC@home message board.
[2025-10-12 10:41:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 10:41:34] Checking for apptainer binary...
[2025-10-12 10:41:34] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 10:41:34] Running /usr/bin/apptainer --version
[2025-10-12 10:41:34] apptainer version 1.4.3-1.el9
[2025-10-12 10:41:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 10:41:34] c8-7-6.aglt2.org
[2025-10-12 10:41:34] apptainer works
[2025-10-12 10:41:34] Set ATHENA_PROC_NUMBER=11
[2025-10-12 10:41:34] Set ATHENA_CORE_NUMBER=11
[2025-10-12 10:41:34] Starting ATLAS job with PandaID=6839661173
[2025-10-12 10:41:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 12:24:16]  *** The last 200 lines of the pilot log: ***
[2025-10-12 12:24:16] 2025-10-12 16:23:13,437 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 12:24:16] 2025-10-12 16:23:15,431 | INFO     | time since job start (6035s) is within the limit (172800.0s)
[2025-10-12 12:24:16] 2025-10-12 16:23:15,945 | INFO     | monitor loop #356: job 0:6839661173 is in state 'finished'
[2025-10-12 12:24:16] 2025-10-12 16:23:15,945 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 12:24:16] 2025-10-12 16:23:17,438 | INFO     | time since job start (6037s) is within the limit (172800.0s)
[2025-10-12 12:24:16] 2025-10-12 16:23:18,455 | INFO     | monitor loop #357: job 0:6839661173 is in state 'finished'
[2025-10-12 12:24:16] 2025-10-12 16:23:18,455 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 12:24:16] 2025-10-12 16:23:19,532 | INFO     | PID=2315376 has CPU usage=12.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-10-12 12:24:16] 2025-10-12 16:23:19,532 | INFO     | .. there are 107 such processes running
[2025-10-12 12:24:16] 2025-10-12 16:23:20,546 | INFO     | time since job start (6040s) is within the limit (172800.0s)
[2025-10-12 12:24:16] 2025-10-12 16:23:20,960 | INFO     | monitor loop #358: job 0:6839661173 is in state 'finished'
[2025-10-12 12:24:16] 2025-10-12 16:23:20,960 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 12:24:16] 2025-10-12 16:23:22,572 | INFO     | time since job start (6042s) is within the limit (172800.0s)
[2025-10-12 12:24:16] 2025-10-12 16:23:23,490 | INFO     | monitor loop #359: job 0:6839661173 is in state 'finished'
[2025-10-12 12:24:16] 2025-10-12 16:23:23,490 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 12:24:16] 2025-10-12 16:23:24,583 | INFO     | time since job start (6044s) is within the limit (172800.0s)
[2025-10-12 12:24:16] 2025-10-12 16:23:26,001 | INFO     | monitor loop #360: job 0:6839661173 is in state 'finished'
[2025-10-12 12:24:16] 2025-10-12 16:23:26,001 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 12:24:16] 2025-10-12 16:23:26,590 | INFO     | time since job start (6046s) is within the limit (172800.0s)
[2025-10-12 12:24:16] 2025-10-12 16:23:28,516 | INFO     | monitor loop #361: job 0:6839661173 is in state 'finished'
[2025-10-12 12:24:16] 2025-10-12 16:23:28,516 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 12:24:16] 2025-10-12 16:23:28,597 | INFO     | time since job start (6048s) is within the limit (172800.0s)
[2025-10-12 12:24:16] 2025-10-12 16:23:30,610 | INFO     | time since job start (6050s) is within the limit (172800.0s)
[2025-10-12 12:24:16] 2025-10-12 16:23:31,042 | INFO     | monitor loop #362: job 0:6839661173 is in state 'finished'
[2025-10-12 12:24:16] 2025-10-12 16:23:31,044 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 12:24:16] 2025-10-12 16:23:32,623 | INFO     | time since job start (6052s) is within the limit (172800.0s)
[2025-10-12 12:24:16] 2025-10-12 16:23:32,623 | INFO     | 6055s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-10-12 12:24:16] 2025-10-12 16:23:33,552 | INFO     | monitor loop #363: job 0:6839661173 is in state 'finished'
[2025-10-12 12:24:16] 2025-10-12 16:23:33,552 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 12:24:16] 2025-10-12 16:23:34,636 | INFO     | time since job start (6054s) is within the limit (172800.0s)
[2025-10-12 12:24:16] 2025-10-12 16:23:36,063 | INFO     | monitor loop #364: job 0:6839661173 is in state 'finished'
[2025-10-12 12:24:16] 2025-10-12 16:23:36,063 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 12:24:16] 2025-10-12 16:23:36,643 | INFO     | time since job start (6056s) is within the limit (172800.0s)
[2025-10-12 12:24:16] 2025-10-12 16:23:38,570 | INFO     | monitor loop #365: job 0:6839661173 is in state 'finished'
[2025-10-12 12:24:16] 2025-10-12 16:23:38,570 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 12:24:16] 2025-10-12 16:23:38,595 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-12 12:24:16] 2025-10-12 16:23:38,599 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3800.136265624997
[2025-10-12 12:24:16] 2025-10-12 16:23:38,659 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6839661173/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 12:24:16] 2025-10-12 16:23:38,660 | INFO     | extracted standard info from prmon json
[2025-10-12 12:24:16] 2025-10-12 16:23:38,660 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 12:24:16] 2025-10-12 16:23:38,660 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 12:24:16] 2025-10-12 16:23:38,660 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 12:24:16] 2025-10-12 16:23:38,660 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 12:24:16] 2025-10-12 16:23:38,662 | INFO     | fitting pss+swap vs Time
[2025-10-12 12:24:16] 2025-10-12 16:23:38,662 | INFO     | sum of square deviations: 226014916.32222202
[2025-10-12 12:24:16] 2025-10-12 16:23:38,662 | INFO     | sum of deviations: 5347238356.422221
[2025-10-12 12:24:16] 2025-10-12 16:23:38,662 | INFO     | mean x: 1760283340.5444446
[2025-10-12 12:24:16] 2025-10-12 16:23:38,662 | INFO     | mean y: 2359877.644444444
[2025-10-12 12:24:16] 2025-10-12 16:23:38,662 | INFO     | -- intersect: -41643805560.88343
[2025-10-12 12:24:16] 2025-10-12 16:23:38,662 | INFO     | intersect: -41643805560.88343
[2025-10-12 12:24:16] 2025-10-12 16:23:38,662 | INFO     | chi2: 0.35032428743932836
[2025-10-12 12:24:16] 2025-10-12 16:23:38,662 | INFO     | -- intersect: -41643805560.88343
[2025-10-12 12:24:16] 2025-10-12 16:23:38,663 | INFO     | current memory leak: 23.66 B/s (using 90 data points, chi2=0.35)
[2025-10-12 12:24:16] 2025-10-12 16:23:38,663 | INFO     | could have reported an average CPU frequency of 3796 MHz (7 samples)
[2025-10-12 12:24:16] 2025-10-12 16:23:38,663 | INFO     | ..............................
[2025-10-12 12:24:16] 2025-10-12 16:23:38,663 | INFO     | . Timing measurements:
[2025-10-12 12:24:16] 2025-10-12 16:23:38,663 | INFO     | . get job = 0 s
[2025-10-12 12:24:16] 2025-10-12 16:23:38,663 | INFO     | . initial setup = 3 s
[2025-10-12 12:24:16] 2025-10-12 16:23:38,663 | INFO     | . payload setup = 47 s
[2025-10-12 12:24:16] 2025-10-12 16:23:38,663 | INFO     | . stage-in = 0 s
[2025-10-12 12:24:16] 2025-10-12 16:23:38,663 | INFO     | . payload execution = 5901 s
[2025-10-12 12:24:16] 2025-10-12 16:23:38,663 | INFO     | . stage-out = 1 s
[2025-10-12 12:24:16] 2025-10-12 16:23:38,663 | INFO     | . log creation = 0 s
[2025-10-12 12:24:16] 2025-10-12 16:23:38,663 | INFO     | ..............................
[2025-10-12 12:24:16] 2025-10-12 16:23:38,666 | INFO     | time since job start (6058s) is within the limit (172800.0s)
[2025-10-12 12:24:16] 2025-10-12 16:23:38,718 | INFO     | 
[2025-10-12 12:24:16] 2025-10-12 16:23:38,718 | INFO     | job summary report
[2025-10-12 12:24:16] 2025-10-12 16:23:38,718 | INFO     | --------------------------------------------------
[2025-10-12 12:24:16] 2025-10-12 16:23:38,718 | INFO     | PanDA job id: 6839661173
[2025-10-12 12:24:16] 2025-10-12 16:23:38,718 | INFO     | task id: 46676269
[2025-10-12 12:24:16] 2025-10-12 16:23:38,718 | INFO     | errors: (none)
[2025-10-12 12:24:16] 2025-10-12 16:23:38,718 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 12:24:16] 2025-10-12 16:23:38,718 | INFO     | pilot state: finished 
[2025-10-12 12:24:16] 2025-10-12 16:23:38,718 | INFO     | transexitcode: 0
[2025-10-12 12:24:16] 2025-10-12 16:23:38,718 | INFO     | exeerrorcode: 0
[2025-10-12 12:24:16] 2025-10-12 16:23:38,718 | INFO     | exeerrordiag: 
[2025-10-12 12:24:16] 2025-10-12 16:23:38,718 | INFO     | exitcode: 0
[2025-10-12 12:24:16] 2025-10-12 16:23:38,718 | INFO     | exitmsg: OK
[2025-10-12 12:24:16] 2025-10-12 16:23:38,719 | INFO     | cpuconsumptiontime: 22593 s
[2025-10-12 12:24:16] 2025-10-12 16:23:38,719 | INFO     | nevents: 400
[2025-10-12 12:24:16] 2025-10-12 16:23:38,719 | INFO     | neventsw: 0
[2025-10-12 12:24:16] 2025-10-12 16:23:38,719 | INFO     | pid: 2369784
[2025-10-12 12:24:16] 2025-10-12 16:23:38,719 | INFO     | pgrp: 2369784
[2025-10-12 12:24:16] 2025-10-12 16:23:38,719 | INFO     | corecount: 11
[2025-10-12 12:24:16] 2025-10-12 16:23:38,719 | INFO     | event service: False
[2025-10-12 12:24:16] 2025-10-12 16:23:38,719 | INFO     | sizes: {0: 2348857, 1: 2348857, 11: 2348885, 22: 2348913, 24: 2349203, 33: 2349231, 5952: 2376118, 5953: 2385116, 5957: 2385172, 5984: 2385366}
[2025-10-12 12:24:16] 2025-10-12 16:23:38,719 | INFO     | --------------------------------------------------
[2025-10-12 12:24:16] 2025-10-12 16:23:38,719 | INFO     | 
[2025-10-12 12:24:16] 2025-10-12 16:23:38,719 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 12:24:16] 2025-10-12 16:23:38,788 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 12:24:16] 2025-10-12 16:23:38,788 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 12:24:16] 2025-10-12 16:23:38,788 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 12:24:16] 2025-10-12 16:23:38,788 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 12:24:16] 2025-10-12 16:23:38,788 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 12:24:16] 2025-10-12 16:23:38,788 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 12:24:16] 2025-10-12 16:23:38,788 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 12:24:16] 2025-10-12 16:23:38,788 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 12:24:16] 2025-10-12 16:23:38,789 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 12:24:16] 2025-10-12 16:23:38,789 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 12:24:16] 2025-10-12 16:23:38,789 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 12:24:16] 2025-10-12 16:23:38,789 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 12:24:16] 2025-10-12 16:23:38,789 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 12:24:16] 2025-10-12 16:23:38,789 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 12:24:16] 2025-10-12 16:23:38,789 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 12:24:16] 2025-10-12 16:23:38,789 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 12:24:16] 2025-10-12 16:23:38,789 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 12:24:16] 2025-10-12 16:23:38,789 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 12:24:16] 2025-10-12 16:23:38,789 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 12:24:16] 2025-10-12 16:23:38,789 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 12:24:16] 2025-10-12 16:23:38,789 | INFO     | job 6839661173 has completed (purged errors)
[2025-10-12 12:24:16] 2025-10-12 16:23:38,789 | INFO     | overall cleanup function is called
[2025-10-12 12:24:16] 2025-10-12 16:23:39,797 | INFO     | --- collectZombieJob: --- 10, [2369784]
[2025-10-12 12:24:16] 2025-10-12 16:23:39,797 | INFO     | zombie collector waiting for pid 2369784
[2025-10-12 12:24:16] 2025-10-12 16:23:39,797 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 12:24:16] 2025-10-12 16:23:39,797 | INFO     | collected zombie processes
[2025-10-12 12:24:16] 2025-10-12 16:23:39,797 | INFO     | will attempt to kill all subprocesses of pid=2369784
[2025-10-12 12:24:16] 2025-10-12 16:23:41,192 | INFO     | process IDs to be killed: [2369784] (in reverse order)
[2025-10-12 12:24:16] 2025-10-12 16:23:41,785 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 12:24:16] 2025-10-12 16:23:41,785 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 12:24:16] 2025-10-12 16:23:41,956 | INFO     | did not find any defunct processes belonging to 2369784
[2025-10-12 12:24:16] 2025-10-12 16:23:42,094 | INFO     | did not find any defunct processes belonging to 2369784
[2025-10-12 12:24:16] 2025-10-12 16:23:42,094 | INFO     | ready for new job
[2025-10-12 12:24:16] 2025-10-12 16:23:42,094 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 12:24:16] 2025-10-12 16:23:42,099 | INFO     | ***************************************
[2025-10-12 12:24:16] 2025-10-12 16:23:42,099 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 12:24:16] 2025-10-12 16:23:42,099 | INFO     | ***************************************
[2025-10-12 12:24:16] 2025-10-12 16:23:42,099 | INFO     | 
[2025-10-12 12:24:16] 2025-10-12 16:23:42,143 | INFO     | architecture information:
[2025-10-12 12:24:16] 2025-10-12 16:23:42,156 | INFO     | executing command: cat /etc/os-release
[2025-10-12 12:24:16] 2025-10-12 16:23:42,255 | INFO     | cat /etc/os-release:
[2025-10-12 12:24:16] NAME="CentOS Linux"
[2025-10-12 12:24:16] VERSION="7 (Core)"
[2025-10-12 12:24:16] ID="centos"
[2025-10-12 12:24:16] ID_LIKE="rhel fedora"
[2025-10-12 12:24:16] VERSION_ID="7"
[2025-10-12 12:24:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 12:24:16] ANSI_COLOR="0;31"
[2025-10-12 12:24:16] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 12:24:16] HOME_URL="https://www.centos.org/"
[2025-10-12 12:24:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 12:24:16] 
[2025-10-12 12:24:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 12:24:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 12:24:16] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 12:24:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 12:24:16] 
[2025-10-12 12:24:16] 2025-10-12 16:23:42,264 | INFO     | ***************************************
[2025-10-12 12:24:16] 2025-10-12 16:23:42,767 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 12:24:16] 2025-10-12 16:23:42,795 | INFO     | sufficient remaining disk space (169030451200 B)
[2025-10-12 12:24:16] 2025-10-12 16:23:42,796 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 12:24:16] 2025-10-12 16:23:42,796 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 12:24:16] 2025-10-12 16:23:42,796 | INFO     | update_server=False
[2025-10-12 12:24:16] 2025-10-12 16:23:42,796 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 12:24:16] 2025-10-12 16:23:42,797 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 12:24:16] 2025-10-12 16:23:42,797 | INFO     | aborting loop
[2025-10-12 12:24:16] 2025-10-12 16:23:43,255 | INFO     | all payload control threads have been joined
[2025-10-12 12:24:16] 2025-10-12 16:23:43,512 | INFO     | all data control threads have been joined
[2025-10-12 12:24:16] 2025-10-12 16:23:43,751 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 12:24:16] 2025-10-12 16:23:43,802 | INFO     | [job] retrieve thread has finished
[2025-10-12 12:24:16] 2025-10-12 16:23:43,803 | INFO     | [job] job monitor thread has finished
[2025-10-12 12:24:16] 2025-10-12 16:23:43,875 | INFO     | [payload] failed_post thread has finished
[2025-10-12 12:24:16] 2025-10-12 16:23:43,983 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 12:24:16] 2025-10-12 16:23:44,055 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 12:24:16] 2025-10-12 16:23:44,056 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 12:24:16] 2025-10-12 16:23:44,173 | INFO     | all job control threads have been joined
[2025-10-12 12:24:16] 2025-10-12 16:23:44,269 | INFO     | [payload] control thread has finished
[2025-10-12 12:24:16] 2025-10-12 16:23:44,453 | INFO     | [data] copytool_in thread has finished
[2025-10-12 12:24:16] 2025-10-12 16:23:44,517 | INFO     | [data] control thread has finished
[2025-10-12 12:24:16] 2025-10-12 16:23:44,590 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 12:24:16] 2025-10-12 16:23:44,641 | INFO     | [job] validate thread has finished
[2025-10-12 12:24:16] 2025-10-12 16:23:44,641 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 12:24:16] 2025-10-12 16:23:44,757 | INFO     | [job] queue monitor thread has finished
[2025-10-12 12:24:16] 2025-10-12 16:23:44,942 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 12:24:16] 2025-10-12 16:23:45,020 | INFO     | [payload] validate_post thread has finished
[2025-10-12 12:24:16] 2025-10-12 16:23:45,179 | INFO     | [job] control thread has finished
[2025-10-12 12:24:16] 2025-10-12 16:23:45,991 | INFO     | [data] copytool_out thread has finished
[2025-10-12 12:24:16] 2025-10-12 16:23:48,959 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 12:24:16] 2025-10-12 16:23:51,260 | INFO     | [monitor] cgroup control has ended
[2025-10-12 12:24:16] 2025-10-12 16:23:51,913 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140617294808896)>', '<ExcThread(monitor, started 140616809830144)>']
[2025-10-12 12:24:16] 2025-10-12 16:23:56,940 | INFO     | all workflow threads have been joined
[2025-10-12 12:24:16] 2025-10-12 16:23:56,940 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 12:24:16] 2025-10-12 16:23:56,940 | INFO     | traces error code: 0
[2025-10-12 12:24:16] 2025-10-12 16:23:56,940 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 12:24:16] 2025-10-12 16:24:14,343 | INFO     | PID=2315376 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 12:24:16] 2025-10-12 16:24:14,343 | INFO     | .. there are 107 such processes running
[2025-10-12 12:24:16] 2025-10-12 16:24:14,344 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 12:24:16] 2025-10-12 16:24:14,344 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 12:24:16] 2025-10-12 16:24:14,344 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 12:24:16] 2025-10-12 16:24:14,344 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 12:24:16] 2025-10-12 16:24:14,345 | INFO     | [monitor] control thread has ended
[2025-10-12 12:24:16] 2025-10-12 16:24:14,768 [wrapper] ==== pilot stdout END ====
[2025-10-12 12:24:16] 2025-10-12 16:24:14,796 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 12:24:16] 2025-10-12 16:24:14,846 [wrapper] pilotpid: 2315376
[2025-10-12 12:24:16] 2025-10-12 16:24:14,877 [wrapper] Pilot exit status: 0
[2025-10-12 12:24:16] 2025-10-12 16:24:15,018 [wrapper] pandaids: 6839661173
[2025-10-12 12:24:16] 2025-10-12 16:24:15,267 [wrapper] cleanup supervisor_pilot 3361496 2315377
[2025-10-12 12:24:16] 2025-10-12 16:24:15,299 [wrapper] Test setup, not cleaning
[2025-10-12 12:24:16] 2025-10-12 16:24:15,308 [wrapper] apfmon messages muted
[2025-10-12 12:24:16] 2025-10-12 16:24:15,360 [wrapper] ==== wrapper stdout END ====
[2025-10-12 12:24:16] 2025-10-12 16:24:15,401 [wrapper] ==== wrapper stderr END ====
[2025-10-12 12:24:16]  *** Error codes and diagnostics ***
[2025-10-12 12:24:16]     "exeErrorCode": 0,
[2025-10-12 12:24:16]     "exeErrorDiag": "",
[2025-10-12 12:24:16]     "pilotErrorCode": 0,
[2025-10-12 12:24:16]     "pilotErrorDiag": "",
[2025-10-12 12:24:16]  *** Listing of results directory ***
[2025-10-12 12:24:16] total 413516
[2025-10-12 12:24:16] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 03:58 pilot3.tar.gz
[2025-10-12 12:24:16] -rwx------. 1 boincer umatlas     36292 Oct 12 04:32 runpilot2-wrapper.sh
[2025-10-12 12:24:16] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 04:32 queuedata.json
[2025-10-12 12:24:16] -rw-r--r--. 1 boincer umatlas       100 Oct 12 10:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 12:24:16] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 10:41 run_atlas
[2025-10-12 12:24:16] -rw-r--r--. 1 boincer umatlas       105 Oct 12 10:41 job.xml
[2025-10-12 12:24:16] -rw-r--r--. 2 boincer umatlas 220044393 Oct 12 10:41 EVNT.46676267._003534.pool.root.1
[2025-10-12 12:24:16] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 10:41 start_atlas.sh
[2025-10-12 12:24:16] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 10:41 shared
[2025-10-12 12:24:16] -rw-r--r--. 2 boincer umatlas    569676 Oct 12 10:41 input.tar.gz
[2025-10-12 12:24:16] -rw-r--r--. 1 boincer umatlas         0 Oct 12 10:41 boinc_lockfile
[2025-10-12 12:24:16] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 10:41 pandaJob.out
[2025-10-12 12:24:16] -rw-------. 1 boincer umatlas    975528 Oct 12 10:42 agis_schedconf.cvmfs.json
[2025-10-12 12:24:16] -rw-------. 1 boincer umatlas   1560580 Oct 12 10:42 agis_ddmendpoints.agis.ALL.json
[2025-10-12 12:24:16] drwx------. 5 boincer umatlas      4096 Oct 12 10:42 pilot3
[2025-10-12 12:24:16] -rw-------. 1 boincer umatlas 197202047 Oct 12 12:22 HITS.46676269._074287.pool.root.1
[2025-10-12 12:24:16] -rw-r--r--. 1 boincer umatlas      7161 Oct 12 12:22 init_data.xml
[2025-10-12 12:24:16] -rw-r--r--. 1 boincer umatlas       529 Oct 12 12:22 boinc_task_state.xml
[2025-10-12 12:24:16] -rw-------. 1 boincer umatlas      1046 Oct 12 12:23 memory_monitor_summary.json
[2025-10-12 12:24:16] -rw-------. 1 boincer umatlas    394238 Oct 12 12:23 log.46676269._074287.job.log.tgz.1
[2025-10-12 12:24:16] -rw-------. 1 boincer umatlas      7802 Oct 12 12:23 heartbeat.json
[2025-10-12 12:24:16] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 12:24 boinc_mmap_file
[2025-10-12 12:24:16] -rw-r--r--. 1 boincer umatlas        27 Oct 12 12:24 wrapper_checkpoint.txt
[2025-10-12 12:24:16] -rw-------. 1 boincer umatlas       824 Oct 12 12:24 pilotlog.txt
[2025-10-12 12:24:16] -rw-------. 1 boincer umatlas        95 Oct 12 12:24 pilot_heartbeat.json
[2025-10-12 12:24:16] -rw-------. 1 boincer umatlas    749671 Oct 12 12:24 log.46676269._074287.job.log.1
[2025-10-12 12:24:16] -rw-------. 1 boincer umatlas       357 Oct 12 12:24 output.list
[2025-10-12 12:24:16] -rw-r--r--. 1 boincer umatlas       620 Oct 12 12:24 runtime_log
[2025-10-12 12:24:16] -rw-------. 1 boincer umatlas   1167360 Oct 12 12:24 result.tar.gz
[2025-10-12 12:24:16] -rw-r--r--. 1 boincer umatlas      8695 Oct 12 12:24 runtime_log.err
[2025-10-12 12:24:16] -rw-------. 1 boincer umatlas       653 Oct 12 12:24 3sYNDm0f6R8n9Rq4apOajLDm4fhM0noT9bVof3QYDmhVTMDmVRoFCo.diag
[2025-10-12 12:24:16] -rw-r--r--. 1 boincer umatlas     22390 Oct 12 12:24 stderr.txt
[2025-10-12 12:24:16] HITS file was successfully produced:
[2025-10-12 12:24:16] -rw-------. 1 boincer umatlas 197202047 Oct 12 12:22 shared/HITS.pool.root.1
[2025-10-12 12:24:16]  *** Contents of shared directory: ***
[2025-10-12 12:24:16] total 409192
[2025-10-12 12:24:16] -rw-r--r--. 2 boincer umatlas 220044393 Oct 12 10:41 ATLAS.root_0
[2025-10-12 12:24:16] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 10:41 start_atlas.sh
[2025-10-12 12:24:16] -rw-r--r--. 2 boincer umatlas    569676 Oct 12 10:41 input.tar.gz
[2025-10-12 12:24:16] -rw-------. 1 boincer umatlas 197202047 Oct 12 12:22 HITS.pool.root.1
[2025-10-12 12:24:16] -rw-------. 1 boincer umatlas   1167360 Oct 12 12:24 result.tar.gz
12:24:18 (2286413): run_atlas exited; CPU time 22802.336839
12:24:18 (2286413): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN