Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:41:42 (5230): wrapper (7.7.26015): starting
16:41:42 (5230): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 16:41:42] Arguments: --nthreads 8
[2025-10-12 16:41:42] Threads: 8
[2025-10-12 16:41:42] Checking for CVMFS
[2025-10-12 16:41:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 16:41:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 16:41:46] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 16:41:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 16:41:47] 2.11.2.0 4673 107509 108008 151623 3 11 16239656 25165824 4632 130560 0 38855756 99.910 16274819 2657 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-10-12 16:41:47] CVMFS is ok
[2025-10-12 16:41:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 16:41:47] Checking for apptainer binary...
[2025-10-12 16:41:47] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 16:41:47] Running /usr/bin/apptainer --version
[2025-10-12 16:41:47] apptainer version 1.3.2-1.el7
[2025-10-12 16:41:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 16:41:50] cg-vwn293.simple-grid.lan
[2025-10-12 16:41:50] apptainer works
[2025-10-12 16:41:50] Set ATHENA_PROC_NUMBER=8
[2025-10-12 16:41:50] Set ATHENA_CORE_NUMBER=8
[2025-10-12 16:41:50] Starting ATLAS job with PandaID=6839867608
[2025-10-12 16:41:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 21:02:36]  *** The last 200 lines of the pilot log: ***
[2025-10-12 21:02:36] 2025-10-12 19:02:20,493 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 21:02:36] 2025-10-12 19:02:20,493 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 21:02:36] 2025-10-12 19:02:20,499 | INFO     | fitting pss+swap vs Time
[2025-10-12 21:02:36] 2025-10-12 19:02:20,500 | INFO     | sum of square deviations: 4560048290.0
[2025-10-12 21:02:36] 2025-10-12 19:02:20,502 | INFO     | sum of deviations: 76140415513.00002
[2025-10-12 21:02:36] 2025-10-12 19:02:20,502 | INFO     | mean x: 1760288278.0
[2025-10-12 21:02:36] 2025-10-12 19:02:20,502 | INFO     | mean y: 2444423.269387755
[2025-10-12 21:02:36] 2025-10-12 19:02:20,502 | INFO     | -- intersect: -29389586622.43326
[2025-10-12 21:02:36] 2025-10-12 19:02:20,502 | INFO     | intersect: -29389586622.43326
[2025-10-12 21:02:36] 2025-10-12 19:02:20,503 | INFO     | chi2: 5.331055089791166
[2025-10-12 21:02:36] 2025-10-12 19:02:20,503 | INFO     | sum of square deviations: 4286517580.0
[2025-10-12 21:02:36] 2025-10-12 19:02:20,505 | INFO     | sum of deviations: 90552037856.99997
[2025-10-12 21:02:36] 2025-10-12 19:02:20,505 | INFO     | mean x: 1760288125.5
[2025-10-12 21:02:36] 2025-10-12 19:02:20,505 | INFO     | mean y: 2452308.55
[2025-10-12 21:02:36] 2025-10-12 19:02:20,505 | INFO     | -- intersect: -37183369049.8459
[2025-10-12 21:02:36] 2025-10-12 19:02:20,505 | INFO     | intersect: -37183369049.8459
[2025-10-12 21:02:36] 2025-10-12 19:02:20,506 | INFO     | chi2: 4.597440402867186
[2025-10-12 21:02:36] 2025-10-12 19:02:20,506 | INFO     | current chi2=4.597440402867186 (change=13.761153741007732 %)
[2025-10-12 21:02:36] 2025-10-12 19:02:20,506 | INFO     | right removable region: 239
[2025-10-12 21:02:36] 2025-10-12 19:02:20,506 | INFO     | sum of square deviations: 4286517580.0
[2025-10-12 21:02:36] 2025-10-12 19:02:20,508 | INFO     | sum of deviations: -2247408726.000002
[2025-10-12 21:02:36] 2025-10-12 19:02:20,509 | INFO     | mean x: 1760288430.5
[2025-10-12 21:02:36] 2025-10-12 19:02:20,509 | INFO     | mean y: 2488061.0416666665
[2025-10-12 21:02:36] 2025-10-12 19:02:20,509 | INFO     | -- intersect: 925402176.0894691
[2025-10-12 21:02:36] 2025-10-12 19:02:20,509 | INFO     | intersect: 925402176.0894691
[2025-10-12 21:02:36] 2025-10-12 19:02:20,509 | INFO     | chi2: 1.3248414911423358
[2025-10-12 21:02:36] 2025-10-12 19:02:20,509 | INFO     | current chi2=1.3248414911423358 (change=75.14860625470982 %)
[2025-10-12 21:02:36] 2025-10-12 19:02:20,510 | INFO     | sum of square deviations: 4024149870.0
[2025-10-12 21:02:36] 2025-10-12 19:02:20,511 | INFO     | sum of deviations: -22715874973.0
[2025-10-12 21:02:36] 2025-10-12 19:02:20,512 | INFO     | mean x: 1760288583.0
[2025-10-12 21:02:36] 2025-10-12 19:02:20,512 | INFO     | mean y: 2499847.625531915
[2025-10-12 21:02:36] 2025-10-12 19:02:20,512 | INFO     | -- intersect: 9939131598.328032
[2025-10-12 21:02:36] 2025-10-12 19:02:20,512 | INFO     | intersect: 9939131598.328032
[2025-10-12 21:02:36] 2025-10-12 19:02:20,512 | INFO     | chi2: 0.8561081064234641
[2025-10-12 21:02:36] 2025-10-12 19:02:20,512 | INFO     | current chi2=0.8561081064234641 (change=35.380337032976634 %)
[2025-10-12 21:02:36] 2025-10-12 19:02:20,513 | INFO     | sum of square deviations: 3772712597.5
[2025-10-12 21:02:36] 2025-10-12 19:02:20,514 | INFO     | sum of deviations: -15669585419.5
[2025-10-12 21:02:36] 2025-10-12 19:02:20,515 | INFO     | mean x: 1760288735.5
[2025-10-12 21:02:36] 2025-10-12 19:02:20,515 | INFO     | mean y: 2495565.9434782607
[2025-10-12 21:02:36] 2025-10-12 19:02:20,515 | INFO     | -- intersect: 7313679227.8473425
[2025-10-12 21:02:36] 2025-10-12 19:02:20,515 | INFO     | intersect: 7313679227.8473425
[2025-10-12 21:02:36] 2025-10-12 19:02:20,515 | INFO     | chi2: 0.8305099657271812
[2025-10-12 21:02:36] 2025-10-12 19:02:20,515 | INFO     | current chi2=0.8305099657271812 (change=2.990059375003878 %)
[2025-10-12 21:02:36] 2025-10-12 19:02:20,515 | INFO     | left removable region: 30
[2025-10-12 21:02:36] 2025-10-12 19:02:20,516 | INFO     | sum of square deviations: 2830787960.0
[2025-10-12 21:02:36] 2025-10-12 19:02:20,517 | INFO     | sum of deviations: 3331315103.000001
[2025-10-12 21:02:36] 2025-10-12 19:02:20,517 | INFO     | mean x: 1760289010.0
[2025-10-12 21:02:36] 2025-10-12 19:02:20,518 | INFO     | mean y: 2502771.1674641147
[2025-10-12 21:02:36] 2025-10-12 19:02:20,518 | INFO     | -- intersect: -2069032591.9608712
[2025-10-12 21:02:36] 2025-10-12 19:02:20,518 | INFO     | intersect: -2069032591.9608712
[2025-10-12 21:02:36] 2025-10-12 19:02:20,518 | INFO     | chi2: 0.001117607381429422
[2025-10-12 21:02:36] 2025-10-12 19:02:20,518 | INFO     | -- intersect: -2069032591.9608712
[2025-10-12 21:02:36] 2025-10-12 19:02:20,519 | INFO     | current memory leak: 1.18 B/s (using 209 data points, chi2=0.00)
[2025-10-12 21:02:36] 2025-10-12 19:02:20,519 | INFO     | could have reported an average CPU frequency of 1999 MHz (11 samples)
[2025-10-12 21:02:36] 2025-10-12 19:02:20,520 | INFO     | ..............................
[2025-10-12 21:02:36] 2025-10-12 19:02:20,520 | INFO     | . Timing measurements:
[2025-10-12 21:02:36] 2025-10-12 19:02:20,520 | INFO     | . get job = 0 s
[2025-10-12 21:02:36] 2025-10-12 19:02:20,520 | INFO     | . initial setup = 10 s
[2025-10-12 21:02:36] 2025-10-12 19:02:20,520 | INFO     | . payload setup = 128 s
[2025-10-12 21:02:36] 2025-10-12 19:02:20,520 | INFO     | . stage-in = 0 s
[2025-10-12 21:02:36] 2025-10-12 19:02:20,520 | INFO     | . payload execution = 15048 s
[2025-10-12 21:02:36] 2025-10-12 19:02:20,520 | INFO     | . stage-out = 1 s
[2025-10-12 21:02:36] 2025-10-12 19:02:20,520 | INFO     | . log creation = 0 s
[2025-10-12 21:02:36] 2025-10-12 19:02:20,520 | INFO     | ..............................
[2025-10-12 21:02:36] 2025-10-12 19:02:20,641 | INFO     | 
[2025-10-12 21:02:36] 2025-10-12 19:02:20,641 | INFO     | job summary report
[2025-10-12 21:02:36] 2025-10-12 19:02:20,641 | INFO     | --------------------------------------------------
[2025-10-12 21:02:36] 2025-10-12 19:02:20,642 | INFO     | PanDA job id: 6839867608
[2025-10-12 21:02:36] 2025-10-12 19:02:20,642 | INFO     | task id: 46676269
[2025-10-12 21:02:36] 2025-10-12 19:02:20,642 | INFO     | errors: (none)
[2025-10-12 21:02:36] 2025-10-12 19:02:20,642 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 21:02:36] 2025-10-12 19:02:20,642 | INFO     | pilot state: finished 
[2025-10-12 21:02:36] 2025-10-12 19:02:20,642 | INFO     | transexitcode: 0
[2025-10-12 21:02:36] 2025-10-12 19:02:20,642 | INFO     | exeerrorcode: 0
[2025-10-12 21:02:36] 2025-10-12 19:02:20,642 | INFO     | exeerrordiag: 
[2025-10-12 21:02:36] 2025-10-12 19:02:20,642 | INFO     | exitcode: 0
[2025-10-12 21:02:36] 2025-10-12 19:02:20,642 | INFO     | exitmsg: OK
[2025-10-12 21:02:36] 2025-10-12 19:02:20,643 | INFO     | cpuconsumptiontime: 56477 s
[2025-10-12 21:02:36] 2025-10-12 19:02:20,643 | INFO     | nevents: 400
[2025-10-12 21:02:36] 2025-10-12 19:02:20,643 | INFO     | neventsw: 0
[2025-10-12 21:02:36] 2025-10-12 19:02:20,643 | INFO     | pid: 15842
[2025-10-12 21:02:36] 2025-10-12 19:02:20,643 | INFO     | pgrp: 15842
[2025-10-12 21:02:36] 2025-10-12 19:02:20,643 | INFO     | corecount: 8
[2025-10-12 21:02:36] 2025-10-12 19:02:20,643 | INFO     | event service: False
[2025-10-12 21:02:36] 2025-10-12 19:02:20,643 | INFO     | sizes: {0: 2348029, 1: 2348714, 2: 2348913, 13: 2348913, 23: 2348969, 34: 2348997, 45: 2349153, 55: 2349181, 66: 2349209, 77: 2349237, 88: 2349293, 90: 2349863, 98
[2025-10-12 21:02:36] 2025-10-12 19:02:20,643 | INFO     | --------------------------------------------------
[2025-10-12 21:02:36] 2025-10-12 19:02:20,643 | INFO     | 
[2025-10-12 21:02:36] 2025-10-12 19:02:20,644 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2025-10-12 21:02:36] 2025-10-12 19:02:20,654 | INFO     | time since job start (15378s) is within the limit (172800.0s)
[2025-10-12 21:02:36] 2025-10-12 19:02:20,686 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 21:02:36] 2025-10-12 19:02:20,686 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 21:02:36] 2025-10-12 19:02:20,686 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 21:02:36] 2025-10-12 19:02:20,686 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 21:02:36] 2025-10-12 19:02:20,686 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 21:02:36] 2025-10-12 19:02:20,686 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 21:02:36] 2025-10-12 19:02:20,686 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 21:02:36] 2025-10-12 19:02:20,687 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 21:02:36] 2025-10-12 19:02:20,687 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 21:02:36] 2025-10-12 19:02:20,687 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 21:02:36] 2025-10-12 19:02:20,687 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 21:02:36] 2025-10-12 19:02:20,687 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 21:02:36] 2025-10-12 19:02:20,687 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 21:02:36] 2025-10-12 19:02:20,687 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 21:02:36] 2025-10-12 19:02:20,687 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 21:02:36] 2025-10-12 19:02:20,687 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 21:02:36] 2025-10-12 19:02:20,687 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 21:02:36] 2025-10-12 19:02:20,687 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 21:02:36] 2025-10-12 19:02:20,688 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 21:02:36] 2025-10-12 19:02:20,688 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 21:02:36] 2025-10-12 19:02:20,688 | INFO     | job 6839867608 has completed (purged errors)
[2025-10-12 21:02:36] 2025-10-12 19:02:20,688 | INFO     | overall cleanup function is called
[2025-10-12 21:02:36] 2025-10-12 19:02:21,698 | INFO     | --- collectZombieJob: --- 10, [15842]
[2025-10-12 21:02:36] 2025-10-12 19:02:21,698 | INFO     | zombie collector waiting for pid 15842
[2025-10-12 21:02:36] 2025-10-12 19:02:21,698 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 21:02:36] 2025-10-12 19:02:21,698 | INFO     | collected zombie processes
[2025-10-12 21:02:36] 2025-10-12 19:02:21,699 | INFO     | will attempt to kill all subprocesses of pid=15842
[2025-10-12 21:02:36] 2025-10-12 19:02:21,790 | INFO     | process IDs to be killed: [15842] (in reverse order)
[2025-10-12 21:02:36] 2025-10-12 19:02:21,858 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 21:02:36] 2025-10-12 19:02:21,858 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 21:02:36] 2025-10-12 19:02:21,862 | INFO     | did not find any defunct processes belonging to 15842
[2025-10-12 21:02:36] 2025-10-12 19:02:21,866 | INFO     | did not find any defunct processes belonging to 15842
[2025-10-12 21:02:36] 2025-10-12 19:02:21,866 | INFO     | ready for new job
[2025-10-12 21:02:36] 2025-10-12 19:02:21,866 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 21:02:36] 2025-10-12 19:02:21,868 | INFO     | ***************************************
[2025-10-12 21:02:36] 2025-10-12 19:02:21,869 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 21:02:36] 2025-10-12 19:02:21,869 | INFO     | ***************************************
[2025-10-12 21:02:36] 2025-10-12 19:02:21,869 | INFO     | 
[2025-10-12 21:02:36] 2025-10-12 19:02:21,870 | INFO     | pilot is running in a VM
[2025-10-12 21:02:36] 2025-10-12 19:02:21,870 | INFO     | architecture information:
[2025-10-12 21:02:36] 2025-10-12 19:02:21,870 | INFO     | executing command: cat /etc/os-release
[2025-10-12 21:02:36] 2025-10-12 19:02:21,896 | INFO     | cat /etc/os-release:
[2025-10-12 21:02:36] NAME="CentOS Linux"
[2025-10-12 21:02:36] VERSION="7 (Core)"
[2025-10-12 21:02:36] ID="centos"
[2025-10-12 21:02:36] ID_LIKE="rhel fedora"
[2025-10-12 21:02:36] VERSION_ID="7"
[2025-10-12 21:02:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 21:02:36] ANSI_COLOR="0;31"
[2025-10-12 21:02:36] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 21:02:36] HOME_URL="https://www.centos.org/"
[2025-10-12 21:02:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 21:02:36] 
[2025-10-12 21:02:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 21:02:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 21:02:36] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 21:02:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 21:02:36] 
[2025-10-12 21:02:36] 2025-10-12 19:02:21,897 | INFO     | ***************************************
[2025-10-12 21:02:36] 2025-10-12 19:02:22,400 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2025-10-12 21:02:36] 2025-10-12 19:02:22,427 | INFO     | sufficient remaining disk space (495358836736 B)
[2025-10-12 21:02:36] 2025-10-12 19:02:22,427 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 21:02:36] 2025-10-12 19:02:22,427 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 21:02:36] 2025-10-12 19:02:22,427 | INFO     | update_server=False
[2025-10-12 21:02:36] 2025-10-12 19:02:22,428 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 21:02:36] 2025-10-12 19:02:22,428 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 21:02:36] 2025-10-12 19:02:22,428 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 21:02:36] 2025-10-12 19:02:22,430 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-10-12 21:02:36] 2025-10-12 19:02:22,430 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 21:02:36] 2025-10-12 19:02:22,430 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 21:02:36] 2025-10-12 19:02:22,430 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 21:02:36] 2025-10-12 19:02:22,802 | INFO     | all payload control threads have been joined
[2025-10-12 21:02:36] 2025-10-12 19:02:22,951 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 21:02:36] 2025-10-12 19:02:22,951 | INFO     | aborting loop
[2025-10-12 21:02:36] 2025-10-12 19:02:23,007 | INFO     | all job control threads have been joined
[2025-10-12 21:02:36] 2025-10-12 19:02:23,285 | INFO     | all data control threads have been joined
[2025-10-12 21:02:36] 2025-10-12 19:02:23,434 | INFO     | [job] retrieve thread has finished
[2025-10-12 21:02:36] 2025-10-12 19:02:23,434 | INFO     | [job] queue monitor thread has finished
[2025-10-12 21:02:36] 2025-10-12 19:02:23,717 | INFO     | [job] validate thread has finished
[2025-10-12 21:02:36] 2025-10-12 19:02:23,805 | INFO     | [payload] control thread has finished
[2025-10-12 21:02:36] 2025-10-12 19:02:23,813 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 21:02:36] 2025-10-12 19:02:23,955 | INFO     | [job] job monitor thread has finished
[2025-10-12 21:02:36] 2025-10-12 19:02:23,983 | INFO     | [data] copytool_in thread has finished
[2025-10-12 21:02:36] 2025-10-12 19:02:24,013 | INFO     | [job] control thread has finished
[2025-10-12 21:02:36] 2025-10-12 19:02:24,028 | INFO     | [payload] failed_post thread has finished
[2025-10-12 21:02:36] 2025-10-12 19:02:24,293 | INFO     | [data] control thread has finished
[2025-10-12 21:02:36] 2025-10-12 19:02:24,435 | INFO     | [data] copytool_out thread has finished
[2025-10-12 21:02:36] 2025-10-12 19:02:24,554 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 21:02:36] 2025-10-12 19:02:24,577 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 21:02:36] 2025-10-12 19:02:24,622 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 21:02:36] 2025-10-12 19:02:24,629 | INFO     | [payload] validate_post thread has finished
[2025-10-12 21:02:36] 2025-10-12 19:02:25,744 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 21:02:36] 2025-10-12 19:02:27,580 | INFO     | [monitor] cgroup control has ended
[2025-10-12 21:02:36] 2025-10-12 19:02:29,752 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 21:02:36] 2025-10-12 19:02:30,596 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140131841800000)>', '<ExcThread(monitor, started 140131403024128)>']
[2025-10-12 21:02:36] 2025-10-12 19:02:31,463 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 21:02:36] 2025-10-12 19:02:31,463 | INFO     | [monitor] control thread has ended
[2025-10-12 21:02:36] 2025-10-12 19:02:35,619 | INFO     | all workflow threads have been joined
[2025-10-12 21:02:36] 2025-10-12 19:02:35,620 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 21:02:36] 2025-10-12 19:02:35,620 | INFO     | traces error code: 0
[2025-10-12 21:02:36] 2025-10-12 19:02:35,620 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 21:02:36] 2025-10-12 19:02:35,803 [wrapper] ==== pilot stdout END ====
[2025-10-12 21:02:36] 2025-10-12 19:02:35,810 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 21:02:36] 2025-10-12 19:02:35,815 [wrapper] pilotpid: 9318
[2025-10-12 21:02:36] 2025-10-12 19:02:35,822 [wrapper] Pilot exit status: 0
[2025-10-12 21:02:36] 2025-10-12 19:02:35,854 [wrapper] pandaids: 6839867608
[2025-10-12 21:02:36] 2025-10-12 19:02:35,894 [wrapper] cleanup supervisor_pilot 28645 9319
[2025-10-12 21:02:36] 2025-10-12 19:02:35,897 [wrapper] Test setup, not cleaning
[2025-10-12 21:02:36] 2025-10-12 19:02:35,900 [wrapper] apfmon messages muted
[2025-10-12 21:02:36] 2025-10-12 19:02:35,911 [wrapper] ==== wrapper stdout END ====
[2025-10-12 21:02:36] 2025-10-12 19:02:35,924 [wrapper] ==== wrapper stderr END ====
[2025-10-12 21:02:36]  *** Error codes and diagnostics ***
[2025-10-12 21:02:36]     "exeErrorCode": 0,
[2025-10-12 21:02:36]     "exeErrorDiag": "",
[2025-10-12 21:02:36]     "pilotErrorCode": 0,
[2025-10-12 21:02:36]     "pilotErrorDiag": "",
[2025-10-12 21:02:36]  *** Listing of results directory ***
[2025-10-12 21:02:36] total 415044
[2025-10-12 21:02:36] -rw-r--r--. 1 boinc boinc    557409 Oct 12 12:38 pilot3.tar.gz
[2025-10-12 21:02:36] -rw-r--r--. 1 boinc boinc      5112 Oct 12 12:53 queuedata.json
[2025-10-12 21:02:36] -rwx------. 1 boinc boinc     36292 Oct 12 12:54 runpilot2-wrapper.sh
[2025-10-12 21:02:36] -rw-r--r--. 1 boinc boinc       100 Oct 12 16:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 21:02:36] -rwxr-xr-x. 1 boinc boinc      7986 Oct 12 16:41 run_atlas
[2025-10-12 21:02:36] -rw-r--r--. 1 boinc boinc       105 Oct 12 16:41 job.xml
[2025-10-12 21:02:36] -rw-r--r--. 2 boinc boinc 219084400 Oct 12 16:41 EVNT.46676267._003644.pool.root.1
[2025-10-12 21:02:36] -rw-r--r--. 2 boinc boinc     15120 Oct 12 16:41 start_atlas.sh
[2025-10-12 21:02:36] drwxrwx--x. 2 boinc boinc        68 Oct 12 16:41 shared
[2025-10-12 21:02:36] -rw-r--r--. 2 boinc boinc    569681 Oct 12 16:41 input.tar.gz
[2025-10-12 21:02:36] -rw-r--r--. 1 boinc boinc      6382 Oct 12 16:41 init_data.xml
[2025-10-12 21:02:36] -rw-r--r--. 1 boinc boinc         0 Oct 12 16:41 boinc_lockfile
[2025-10-12 21:02:36] -rw-r--r--. 1 boinc boinc      2550 Oct 12 16:41 pandaJob.out
[2025-10-12 21:02:36] -rw-------. 1 boinc boinc    975528 Oct 12 16:45 agis_schedconf.cvmfs.json
[2025-10-12 21:02:36] drwx------. 5 boinc boinc      4096 Oct 12 16:46 pilot3
[2025-10-12 21:02:36] -rw-------. 1 boinc boinc 196924426 Oct 12 21:01 HITS.46676269._076487.pool.root.1
[2025-10-12 21:02:36] -rw-r--r--. 1 boinc boinc       531 Oct 12 21:01 boinc_task_state.xml
[2025-10-12 21:02:36] -rw-------. 1 boinc boinc      1020 Oct 12 21:02 memory_monitor_summary.json
[2025-10-12 21:02:36] -rw-------. 1 boinc boinc   1560580 Oct 12 21:02 agis_ddmendpoints.agis.ALL.json
[2025-10-12 21:02:36] -rw-------. 1 boinc boinc    483537 Oct 12 21:02 log.46676269._076487.job.log.tgz.1
[2025-10-12 21:02:36] -rw-------. 1 boinc boinc        95 Oct 12 21:02 pilot_heartbeat.json
[2025-10-12 21:02:36] -rw-r--r--. 1 boinc boinc      8192 Oct 12 21:02 boinc_mmap_file
[2025-10-12 21:02:36] -rw-r--r--. 1 boinc boinc        28 Oct 12 21:02 wrapper_checkpoint.txt
[2025-10-12 21:02:36] -rw-------. 1 boinc boinc      7781 Oct 12 21:02 heartbeat.json
[2025-10-12 21:02:36] -rw-------. 1 boinc boinc      4615 Oct 12 21:02 pilotlog.txt
[2025-10-12 21:02:36] -rw-------. 1 boinc boinc   2064838 Oct 12 21:02 log.46676269._076487.job.log.1
[2025-10-12 21:02:36] -rw-------. 1 boinc boinc       357 Oct 12 21:02 output.list
[2025-10-12 21:02:36] -rw-r--r--. 1 boinc boinc       620 Oct 12 21:02 runtime_log
[2025-10-12 21:02:36] -rw-------. 1 boinc boinc   2570240 Oct 12 21:02 result.tar.gz
[2025-10-12 21:02:36] -rw-r--r--. 1 boinc boinc      8703 Oct 12 21:02 runtime_log.err
[2025-10-12 21:02:36] -rw-------. 1 boinc boinc       657 Oct 12 21:02 dWhLDm3t8R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmKWjNDm6tblPm.diag
[2025-10-12 21:02:36] -rw-r--r--. 1 boinc boinc     20544 Oct 12 21:02 stderr.txt
[2025-10-12 21:02:36] HITS file was successfully produced:
[2025-10-12 21:02:36] -rw-------. 1 boinc boinc 196924426 Oct 12 21:01 shared/HITS.pool.root.1
[2025-10-12 21:02:36]  *** Contents of shared directory: ***
[2025-10-12 21:02:36] total 409352
[2025-10-12 21:02:36] -rw-r--r--. 2 boinc boinc 219084400 Oct 12 16:41 ATLAS.root_0
[2025-10-12 21:02:36] -rw-r--r--. 2 boinc boinc     15120 Oct 12 16:41 start_atlas.sh
[2025-10-12 21:02:36] -rw-r--r--. 2 boinc boinc    569681 Oct 12 16:41 input.tar.gz
[2025-10-12 21:02:36] -rw-------. 1 boinc boinc 196924426 Oct 12 21:01 HITS.pool.root.1
[2025-10-12 21:02:36] -rw-------. 1 boinc boinc   2570240 Oct 12 21:02 result.tar.gz
21:02:37 (5230): run_atlas exited; CPU time 56685.982440
21:02:37 (5230): called boinc_finish(0)

</stderr_txt>
]]>

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