Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:13:11 (2353975): wrapper (7.7.26015): starting
11:13:11 (2353975): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 11:13:11] Arguments: --nthreads 8
[2025-10-12 11:13:11] Threads: 8
[2025-10-12 11:13:11] Checking for CVMFS
[2025-10-12 11:13:12] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 11:13:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 11:13:12] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 11:13:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 11:13:13] 2.13.2.0 231297 52825 355092 151623 0 450 38599887 40960000 21022 16776704 0 134421708 99.638 129068103 29297 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 11:13:13] CVMFS is ok
[2025-10-12 11:13:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 11:13:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 11:13:13] Further information can be found at the LHC@home message board.
[2025-10-12 11:13:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 11:13:13] Checking for apptainer binary...
[2025-10-12 11:13:13] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 11:13:13] Running /usr/bin/apptainer --version
[2025-10-12 11:13:13] apptainer version 1.4.3-1.el9
[2025-10-12 11:13:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 11:13:14] c6-5-7-4.aglt2.org
[2025-10-12 11:13:14] apptainer works
[2025-10-12 11:13:14] Set ATHENA_PROC_NUMBER=8
[2025-10-12 11:13:14] Set ATHENA_CORE_NUMBER=8
[2025-10-12 11:13:14] Starting ATLAS job with PandaID=6839866980
[2025-10-12 11:13:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 16:45:18]  *** The last 200 lines of the pilot log: ***
[2025-10-12 16:45:18] 2025-10-12 20:44:27,593 | INFO     | sum of deviations: -137686449063.04654
[2025-10-12 16:45:18] 2025-10-12 20:44:27,593 | INFO     | mean x: 1760291964.1024845
[2025-10-12 16:45:18] 2025-10-12 20:44:27,593 | INFO     | mean y: 2577454.183229814
[2025-10-12 16:45:18] 2025-10-12 20:44:27,593 | INFO     | -- intersect: 23415444071.55618
[2025-10-12 16:45:18] 2025-10-12 20:44:27,593 | INFO     | intersect: 23415444071.55618
[2025-10-12 16:45:18] 2025-10-12 20:44:27,615 | INFO     | chi2: 4.453435941623365
[2025-10-12 16:45:18] 2025-10-12 20:44:27,616 | INFO     | sum of square deviations: 9877179989.274462
[2025-10-12 16:45:18] 2025-10-12 20:44:27,618 | INFO     | sum of deviations: -93043121113.39114
[2025-10-12 16:45:18] 2025-10-12 20:44:27,618 | INFO     | mean x: 1760291811.6119874
[2025-10-12 16:45:18] 2025-10-12 20:44:27,619 | INFO     | mean y: 2591668.2082018927
[2025-10-12 16:45:18] 2025-10-12 20:44:27,649 | INFO     | -- intersect: 16584555791.629597
[2025-10-12 16:45:18] 2025-10-12 20:44:27,649 | INFO     | intersect: 16584555791.629597
[2025-10-12 16:45:18] 2025-10-12 20:44:27,650 | INFO     | chi2: 3.0440089096395067
[2025-10-12 16:45:18] 2025-10-12 20:44:27,650 | INFO     | current chi2=3.0440089096395067 (change=31.648081401842155 %)
[2025-10-12 16:45:18] 2025-10-12 20:44:27,650 | INFO     | sum of square deviations: 9417078393.509703
[2025-10-12 16:45:18] 2025-10-12 20:44:27,653 | INFO     | sum of deviations: -90450928849.18275
[2025-10-12 16:45:18] 2025-10-12 20:44:27,685 | INFO     | mean x: 1760291659.1057692
[2025-10-12 16:45:18] 2025-10-12 20:44:27,685 | INFO     | mean y: 2592527.4903846155
[2025-10-12 16:45:18] 2025-10-12 20:44:27,685 | INFO     | -- intersect: 16910173515.806358
[2025-10-12 16:45:18] 2025-10-12 20:44:27,685 | INFO     | intersect: 16910173515.806358
[2025-10-12 16:45:18] 2025-10-12 20:44:27,686 | INFO     | chi2: 3.0406427886485057
[2025-10-12 16:45:18] 2025-10-12 20:44:27,686 | INFO     | current chi2=3.0406427886485057 (change=0.110581837666159 %)
[2025-10-12 16:45:18] 2025-10-12 20:44:27,686 | INFO     | right removable region: 311
[2025-10-12 16:45:18] 2025-10-12 20:44:27,686 | INFO     | sum of square deviations: 9877061649.274475
[2025-10-12 16:45:18] 2025-10-12 20:44:27,712 | INFO     | sum of deviations: -212706833302.64038
[2025-10-12 16:45:18] 2025-10-12 20:44:27,713 | INFO     | mean x: 1760292116.6119874
[2025-10-12 16:45:18] 2025-10-12 20:44:27,713 | INFO     | mean y: 2601448.905362776
[2025-10-12 16:45:18] 2025-10-12 20:44:27,713 | INFO     | -- intersect: 37911260431.47248
[2025-10-12 16:45:18] 2025-10-12 20:44:27,713 | INFO     | intersect: 37911260431.47248
[2025-10-12 16:45:18] 2025-10-12 20:44:27,713 | INFO     | chi2: 2.1423792219376323
[2025-10-12 16:45:18] 2025-10-12 20:44:27,714 | INFO     | current chi2=2.1423792219376323 (change=51.89379054688518 %)
[2025-10-12 16:45:18] 2025-10-12 20:44:27,714 | INFO     | sum of square deviations: 9416976589.846098
[2025-10-12 16:45:18] 2025-10-12 20:44:27,749 | INFO     | sum of deviations: -220197958535.2695
[2025-10-12 16:45:18] 2025-10-12 20:44:27,749 | INFO     | mean x: 1760292269.1153846
[2025-10-12 16:45:18] 2025-10-12 20:44:27,750 | INFO     | mean y: 2603916.2852564105
[2025-10-12 16:45:18] 2025-10-12 20:44:27,750 | INFO     | -- intersect: 41163666640.23535
[2025-10-12 16:45:18] 2025-10-12 20:44:27,750 | INFO     | intersect: 41163666640.23535
[2025-10-12 16:45:18] 2025-10-12 20:44:27,750 | INFO     | chi2: 2.0591022020986314
[2025-10-12 16:45:18] 2025-10-12 20:44:27,750 | INFO     | current chi2=2.0591022020986314 (change=3.8871278710256854 %)
[2025-10-12 16:45:18] 2025-10-12 20:44:27,751 | INFO     | left removable region: 20
[2025-10-12 16:45:18] 2025-10-12 20:44:27,751 | INFO     | sum of square deviations: 7640461253.917539
[2025-10-12 16:45:18] 2025-10-12 20:44:27,786 | INFO     | sum of deviations: -149208234541.1133
[2025-10-12 16:45:18] 2025-10-12 20:44:27,786 | INFO     | mean x: 1760292238.628866
[2025-10-12 16:45:18] 2025-10-12 20:44:27,786 | INFO     | mean y: 2612392.6563573885
[2025-10-12 16:45:18] 2025-10-12 20:44:27,786 | INFO     | -- intersect: 34378821952.98455
[2025-10-12 16:45:18] 2025-10-12 20:44:27,786 | INFO     | intersect: 34378821952.98455
[2025-10-12 16:45:18] 2025-10-12 20:44:27,787 | INFO     | chi2: 0.5722225697069773
[2025-10-12 16:45:18] 2025-10-12 20:44:27,787 | INFO     | -- intersect: 34378821952.98455
[2025-10-12 16:45:18] 2025-10-12 20:44:27,787 | INFO     | current memory leak: -19.53 B/s (using 291 data points, chi2=0.57)
[2025-10-12 16:45:18] 2025-10-12 20:44:27,820 | INFO     | could have reported an average CPU frequency of 2788 MHz (14 samples)
[2025-10-12 16:45:18] 2025-10-12 20:44:27,820 | INFO     | ..............................
[2025-10-12 16:45:18] 2025-10-12 20:44:27,821 | INFO     | . Timing measurements:
[2025-10-12 16:45:18] 2025-10-12 20:44:27,821 | INFO     | . get job = 0 s
[2025-10-12 16:45:18] 2025-10-12 20:44:27,821 | INFO     | . initial setup = 5 s
[2025-10-12 16:45:18] 2025-10-12 20:44:27,821 | INFO     | . payload setup = 31 s
[2025-10-12 16:45:18] 2025-10-12 20:44:27,821 | INFO     | . stage-in = 0 s
[2025-10-12 16:45:18] 2025-10-12 20:44:27,821 | INFO     | . payload execution = 19659 s
[2025-10-12 16:45:18] 2025-10-12 20:44:27,821 | INFO     | . stage-out = 9 s
[2025-10-12 16:45:18] 2025-10-12 20:44:27,821 | INFO     | . log creation = 1 s
[2025-10-12 16:45:18] 2025-10-12 20:44:27,821 | INFO     | ..............................
[2025-10-12 16:45:18] 2025-10-12 20:44:29,396 | INFO     | time since job start (19820s) is within the limit (172800.0s)
[2025-10-12 16:45:18] 2025-10-12 20:44:29,687 | INFO     | 
[2025-10-12 16:45:18] 2025-10-12 20:44:29,687 | INFO     | job summary report
[2025-10-12 16:45:18] 2025-10-12 20:44:29,687 | INFO     | --------------------------------------------------
[2025-10-12 16:45:18] 2025-10-12 20:44:29,687 | INFO     | PanDA job id: 6839866980
[2025-10-12 16:45:18] 2025-10-12 20:44:29,687 | INFO     | task id: 46676269
[2025-10-12 16:45:18] 2025-10-12 20:44:29,688 | INFO     | errors: (none)
[2025-10-12 16:45:18] 2025-10-12 20:44:29,688 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 16:45:18] 2025-10-12 20:44:29,688 | INFO     | pilot state: finished 
[2025-10-12 16:45:18] 2025-10-12 20:44:29,688 | INFO     | transexitcode: 0
[2025-10-12 16:45:18] 2025-10-12 20:44:29,688 | INFO     | exeerrorcode: 0
[2025-10-12 16:45:18] 2025-10-12 20:44:29,688 | INFO     | exeerrordiag: 
[2025-10-12 16:45:18] 2025-10-12 20:44:29,688 | INFO     | exitcode: 0
[2025-10-12 16:45:18] 2025-10-12 20:44:29,688 | INFO     | exitmsg: OK
[2025-10-12 16:45:18] 2025-10-12 20:44:29,688 | INFO     | cpuconsumptiontime: 45118 s
[2025-10-12 16:45:18] 2025-10-12 20:44:29,688 | INFO     | nevents: 400
[2025-10-12 16:45:18] 2025-10-12 20:44:29,688 | INFO     | neventsw: 0
[2025-10-12 16:45:18] 2025-10-12 20:44:29,688 | INFO     | pid: 2396873
[2025-10-12 16:45:18] 2025-10-12 20:44:29,688 | INFO     | pgrp: 2396873
[2025-10-12 16:45:18] 2025-10-12 20:44:29,688 | INFO     | corecount: 8
[2025-10-12 16:45:18] 2025-10-12 20:44:29,688 | INFO     | event service: False
[2025-10-12 16:45:18] 2025-10-12 20:44:29,688 | INFO     | sizes: {0: 2348686, 1: 2348714, 2: 2348913, 13: 2348913, 24: 2348969, 26: 2349259, 35: 2349415, 19696: 2382473, 19706: 2391471, 19707: 2391527, 19757: 2391721}
[2025-10-12 16:45:18] 2025-10-12 20:44:29,689 | INFO     | --------------------------------------------------
[2025-10-12 16:45:18] 2025-10-12 20:44:29,689 | INFO     | 
[2025-10-12 16:45:18] 2025-10-12 20:44:29,689 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-12 16:45:18] 2025-10-12 20:44:30,001 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 16:45:18] 2025-10-12 20:44:30,002 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 16:45:18] 2025-10-12 20:44:30,002 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 16:45:18] 2025-10-12 20:44:30,002 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 16:45:18] 2025-10-12 20:44:30,002 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 16:45:18] 2025-10-12 20:44:30,002 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 16:45:18] 2025-10-12 20:44:30,002 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 16:45:18] 2025-10-12 20:44:30,002 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 16:45:18] 2025-10-12 20:44:30,003 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 16:45:18] 2025-10-12 20:44:30,003 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 16:45:18] 2025-10-12 20:44:30,003 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 16:45:18] 2025-10-12 20:44:30,003 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 16:45:18] 2025-10-12 20:44:30,003 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 16:45:18] 2025-10-12 20:44:30,003 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 16:45:18] 2025-10-12 20:44:30,003 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 16:45:18] 2025-10-12 20:44:30,003 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 16:45:18] 2025-10-12 20:44:30,004 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 16:45:18] 2025-10-12 20:44:30,004 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 16:45:18] 2025-10-12 20:44:30,004 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 16:45:18] 2025-10-12 20:44:30,004 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 16:45:18] 2025-10-12 20:44:30,004 | INFO     | job 6839866980 has completed (purged errors)
[2025-10-12 16:45:18] 2025-10-12 20:44:30,004 | INFO     | overall cleanup function is called
[2025-10-12 16:45:18] 2025-10-12 20:44:31,038 | INFO     | --- collectZombieJob: --- 10, [2396873]
[2025-10-12 16:45:18] 2025-10-12 20:44:31,038 | INFO     | zombie collector waiting for pid 2396873
[2025-10-12 16:45:18] 2025-10-12 20:44:31,038 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 16:45:18] 2025-10-12 20:44:31,038 | INFO     | collected zombie processes
[2025-10-12 16:45:18] 2025-10-12 20:44:31,038 | INFO     | will attempt to kill all subprocesses of pid=2396873
[2025-10-12 16:45:18] 2025-10-12 20:44:36,894 | INFO     | PID=2371806 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 16:45:18] 2025-10-12 20:44:36,895 | INFO     | .. there are 30 such processes running
[2025-10-12 16:45:18] 2025-10-12 20:44:37,289 | INFO     | process IDs to be killed: [2396873] (in reverse order)
[2025-10-12 16:45:18] 2025-10-12 20:44:38,450 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 16:45:18] 2025-10-12 20:44:38,450 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 16:45:18] 2025-10-12 20:44:38,582 | INFO     | did not find any defunct processes belonging to 2396873
[2025-10-12 16:45:18] 2025-10-12 20:44:38,604 | INFO     | did not find any defunct processes belonging to 2396873
[2025-10-12 16:45:18] 2025-10-12 20:44:38,604 | INFO     | ready for new job
[2025-10-12 16:45:18] 2025-10-12 20:44:38,604 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 16:45:18] 2025-10-12 20:44:38,607 | INFO     | ***************************************
[2025-10-12 16:45:18] 2025-10-12 20:44:38,608 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 16:45:18] 2025-10-12 20:44:38,608 | INFO     | ***************************************
[2025-10-12 16:45:18] 2025-10-12 20:44:38,608 | INFO     | 
[2025-10-12 16:45:18] 2025-10-12 20:44:38,626 | INFO     | architecture information:
[2025-10-12 16:45:18] 2025-10-12 20:44:38,652 | INFO     | executing command: cat /etc/os-release
[2025-10-12 16:45:18] 2025-10-12 20:44:38,793 | INFO     | cat /etc/os-release:
[2025-10-12 16:45:18] NAME="CentOS Linux"
[2025-10-12 16:45:18] VERSION="7 (Core)"
[2025-10-12 16:45:18] ID="centos"
[2025-10-12 16:45:18] ID_LIKE="rhel fedora"
[2025-10-12 16:45:18] VERSION_ID="7"
[2025-10-12 16:45:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 16:45:18] ANSI_COLOR="0;31"
[2025-10-12 16:45:18] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 16:45:18] HOME_URL="https://www.centos.org/"
[2025-10-12 16:45:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 16:45:18] 
[2025-10-12 16:45:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 16:45:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 16:45:18] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 16:45:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 16:45:18] 
[2025-10-12 16:45:18] 2025-10-12 20:44:38,793 | INFO     | ***************************************
[2025-10-12 16:45:18] 2025-10-12 20:44:39,297 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-12 16:45:18] 2025-10-12 20:44:39,392 | INFO     | sufficient remaining disk space (74519150592 B)
[2025-10-12 16:45:18] 2025-10-12 20:44:39,393 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 16:45:18] 2025-10-12 20:44:39,393 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 16:45:18] 2025-10-12 20:44:39,393 | INFO     | update_server=False
[2025-10-12 16:45:18] 2025-10-12 20:44:39,393 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 16:45:18] 2025-10-12 20:44:39,394 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 16:45:18] 2025-10-12 20:44:39,411 | INFO     | all data control threads have been joined
[2025-10-12 16:45:18] 2025-10-12 20:44:39,522 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 16:45:18] 2025-10-12 20:44:39,646 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 16:45:18] 2025-10-12 20:44:39,654 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 16:45:18] 2025-10-12 20:44:39,654 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 16:45:18] 2025-10-12 20:44:39,654 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 16:45:18] 2025-10-12 20:44:39,654 | INFO     | will abort loop
[2025-10-12 16:45:18] 2025-10-12 20:44:39,661 | INFO     | all job control threads have been joined
[2025-10-12 16:45:18] 2025-10-12 20:44:39,922 | INFO     | all payload control threads have been joined
[2025-10-12 16:45:18] 2025-10-12 20:44:40,399 | INFO     | [job] retrieve thread has finished
[2025-10-12 16:45:18] 2025-10-12 20:44:40,400 | INFO     | [job] queue monitor thread has finished
[2025-10-12 16:45:18] 2025-10-12 20:44:40,417 | INFO     | [data] control thread has finished
[2025-10-12 16:45:18] 2025-10-12 20:44:40,660 | INFO     | [job] job monitor thread has finished
[2025-10-12 16:45:18] 2025-10-12 20:44:40,667 | INFO     | [job] control thread has finished
[2025-10-12 16:45:18] 2025-10-12 20:44:40,875 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 16:45:18] 2025-10-12 20:44:40,875 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 16:45:18] 2025-10-12 20:44:40,876 | INFO     | [data] copytool_in thread has finished
[2025-10-12 16:45:18] 2025-10-12 20:44:40,882 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 16:45:18] 2025-10-12 20:44:40,882 | INFO     | [job] validate thread has finished
[2025-10-12 16:45:18] 2025-10-12 20:44:40,888 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 16:45:18] 2025-10-12 20:44:40,929 | INFO     | [payload] control thread has finished
[2025-10-12 16:45:18] 2025-10-12 20:44:41,604 | INFO     | [payload] validate_post thread has finished
[2025-10-12 16:45:18] 2025-10-12 20:44:41,604 | INFO     | [payload] failed_post thread has finished
[2025-10-12 16:45:18] 2025-10-12 20:44:41,653 | INFO     | [data] copytool_out thread has finished
[2025-10-12 16:45:18] 2025-10-12 20:44:43,584 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 16:45:18] 2025-10-12 20:44:45,448 | INFO     | [monitor] cgroup control has ended
[2025-10-12 16:45:18] 2025-10-12 20:44:45,800 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140614420113216)>', '<ExcThread(monitor, started 140613336954624)>']
[2025-10-12 16:45:18] 2025-10-12 20:44:50,826 | INFO     | all workflow threads have been joined
[2025-10-12 16:45:18] 2025-10-12 20:44:50,826 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 16:45:18] 2025-10-12 20:44:50,826 | INFO     | traces error code: 0
[2025-10-12 16:45:18] 2025-10-12 20:44:50,826 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 16:45:18] 2025-10-12 20:45:13,966 | INFO     | PID=2371806 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 16:45:18] 2025-10-12 20:45:13,997 | INFO     | .. there are 30 such processes running
[2025-10-12 16:45:18] 2025-10-12 20:45:13,998 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 16:45:18] 2025-10-12 20:45:13,999 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 16:45:18] 2025-10-12 20:45:13,999 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 16:45:18] 2025-10-12 20:45:13,999 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 16:45:18] 2025-10-12 20:45:13,999 | INFO     | [monitor] control thread has ended
[2025-10-12 16:45:18] 2025-10-12 20:45:15,276 [wrapper] ==== pilot stdout END ====
[2025-10-12 16:45:18] 2025-10-12 20:45:15,293 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 16:45:18] 2025-10-12 20:45:15,317 [wrapper] pilotpid: 2371806
[2025-10-12 16:45:18] 2025-10-12 20:45:15,365 [wrapper] Pilot exit status: 0
[2025-10-12 16:45:18] 2025-10-12 20:45:15,557 [wrapper] pandaids: 6839866980
[2025-10-12 16:45:18] 2025-10-12 20:45:16,736 [wrapper] cleanup supervisor_pilot 3385427 2371807
[2025-10-12 16:45:18] 2025-10-12 20:45:16,773 [wrapper] Test setup, not cleaning
[2025-10-12 16:45:18] 2025-10-12 20:45:16,816 [wrapper] apfmon messages muted
[2025-10-12 16:45:18] 2025-10-12 20:45:16,892 [wrapper] ==== wrapper stdout END ====
[2025-10-12 16:45:18] 2025-10-12 20:45:17,038 [wrapper] ==== wrapper stderr END ====
[2025-10-12 16:45:18]  *** Error codes and diagnostics ***
[2025-10-12 16:45:18]     "exeErrorCode": 0,
[2025-10-12 16:45:18]     "exeErrorDiag": "",
[2025-10-12 16:45:18]     "pilotErrorCode": 0,
[2025-10-12 16:45:18]     "pilotErrorDiag": "",
[2025-10-12 16:45:18]  *** Listing of results directory ***
[2025-10-12 16:45:18] total 411536
[2025-10-12 16:45:18] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 06:38 pilot3.tar.gz
[2025-10-12 16:45:18] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 06:53 queuedata.json
[2025-10-12 16:45:18] -rwx------. 1 boincer umatlas     36292 Oct 12 06:54 runpilot2-wrapper.sh
[2025-10-12 16:45:18] -rw-r--r--. 1 boincer umatlas       100 Oct 12 11:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 16:45:18] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 11:13 run_atlas
[2025-10-12 16:45:18] -rw-r--r--. 1 boincer umatlas       105 Oct 12 11:13 job.xml
[2025-10-12 16:45:18] -rw-r--r--. 2 boincer umatlas 221021662 Oct 12 11:13 EVNT.46676267._003631.pool.root.1
[2025-10-12 16:45:18] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 11:13 start_atlas.sh
[2025-10-12 16:45:18] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 11:13 shared
[2025-10-12 16:45:18] -rw-r--r--. 2 boincer umatlas    569685 Oct 12 11:13 input.tar.gz
[2025-10-12 16:45:18] -rw-r--r--. 1 boincer umatlas         0 Oct 12 11:13 boinc_lockfile
[2025-10-12 16:45:18] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 11:13 pandaJob.out
[2025-10-12 16:45:18] -rw-------. 1 boincer umatlas    975528 Oct 12 11:14 agis_schedconf.cvmfs.json
[2025-10-12 16:45:18] drwx------. 5 boincer umatlas      4096 Oct 12 11:14 pilot3
[2025-10-12 16:45:18] -rw-r--r--. 1 boincer umatlas      6842 Oct 12 16:36 init_data.xml
[2025-10-12 16:45:18] -rw-------. 1 boincer umatlas 190612487 Oct 12 16:40 HITS.46676269._076299.pool.root.1
[2025-10-12 16:45:18] -rw-r--r--. 1 boincer umatlas       531 Oct 12 16:41 boinc_task_state.xml
[2025-10-12 16:45:18] -rw-------. 1 boincer umatlas      1043 Oct 12 16:43 memory_monitor_summary.json
[2025-10-12 16:45:18] -rw-------. 1 boincer umatlas   1560580 Oct 12 16:43 agis_ddmendpoints.agis.ALL.json
[2025-10-12 16:45:18] -rw-------. 1 boincer umatlas    515005 Oct 12 16:43 log.46676269._076299.job.log.tgz.1
[2025-10-12 16:45:18] -rw-------. 1 boincer umatlas      7826 Oct 12 16:44 heartbeat.json
[2025-10-12 16:45:18] -rw-------. 1 boincer umatlas        95 Oct 12 16:45 pilot_heartbeat.json
[2025-10-12 16:45:18] -rw-------. 1 boincer umatlas       823 Oct 12 16:45 pilotlog.txt
[2025-10-12 16:45:18] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 16:45 boinc_mmap_file
[2025-10-12 16:45:18] -rw-r--r--. 1 boincer umatlas        28 Oct 12 16:45 wrapper_checkpoint.txt
[2025-10-12 16:45:18] -rw-------. 1 boincer umatlas   2421144 Oct 12 16:45 log.46676269._076299.job.log.1
[2025-10-12 16:45:18] -rw-------. 1 boincer umatlas       357 Oct 12 16:45 output.list
[2025-10-12 16:45:18] -rw-r--r--. 1 boincer umatlas       620 Oct 12 16:45 runtime_log
[2025-10-12 16:45:18] -rw-------. 1 boincer umatlas   2959360 Oct 12 16:45 result.tar.gz
[2025-10-12 16:45:18] -rw-r--r--. 1 boincer umatlas      8704 Oct 12 16:45 runtime_log.err
[2025-10-12 16:45:18] -rw-------. 1 boincer umatlas       656 Oct 12 16:45 JsUKDmtt8R8n9Rq4apOajLDm4fhM0noT9bVof3QYDmDgTMDmaN29nn.diag
[2025-10-12 16:45:18] -rw-r--r--. 1 boincer umatlas     21206 Oct 12 16:45 stderr.txt
[2025-10-12 16:45:18] HITS file was successfully produced:
[2025-10-12 16:45:18] -rw-------. 1 boincer umatlas 190612487 Oct 12 16:40 shared/HITS.pool.root.1
[2025-10-12 16:45:18]  *** Contents of shared directory: ***
[2025-10-12 16:45:18] total 405464
[2025-10-12 16:45:18] -rw-r--r--. 2 boincer umatlas 221021662 Oct 12 11:13 ATLAS.root_0
[2025-10-12 16:45:18] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 11:13 start_atlas.sh
[2025-10-12 16:45:18] -rw-r--r--. 2 boincer umatlas    569685 Oct 12 11:13 input.tar.gz
[2025-10-12 16:45:18] -rw-------. 1 boincer umatlas 190612487 Oct 12 16:40 HITS.pool.root.1
[2025-10-12 16:45:18] -rw-------. 1 boincer umatlas   2959360 Oct 12 16:45 result.tar.gz
16:45:20 (2353975): run_atlas exited; CPU time 45759.575783
16:45:20 (2353975): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN