Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:44:30 (587993): wrapper (7.7.26015): starting
10:44:30 (587993): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 10:44:30] Arguments: --nthreads 8
[2025-10-12 10:44:30] Threads: 8
[2025-10-12 10:44:30] Checking for CVMFS
[2025-10-12 10:44:30] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 10:44:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 10:44:30] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 10:44:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 10:44:31] 2.13.2.0 126724 125178 304992 151623 1 234 21742451 32935937 37834 16776704 1 292116229 99.674 266237670 20701 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 10:44:31] CVMFS is ok
[2025-10-12 10:44:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 10:44:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 10:44:31] Further information can be found at the LHC@home message board.
[2025-10-12 10:44:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 10:44:31] Checking for apptainer binary...
[2025-10-12 10:44:31] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 10:44:31] Running /usr/bin/apptainer --version
[2025-10-12 10:44:32] apptainer version 1.4.3-1.el9
[2025-10-12 10:44:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 10:44:32] c6-12-27-3.aglt2.org
[2025-10-12 10:44:32] apptainer works
[2025-10-12 10:44:32] Set ATHENA_PROC_NUMBER=8
[2025-10-12 10:44:32] Set ATHENA_CORE_NUMBER=8
[2025-10-12 10:44:32] Starting ATLAS job with PandaID=6839774658
[2025-10-12 10:44:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 14:50:13]  *** The last 200 lines of the pilot log: ***
[2025-10-12 14:50:13] 2025-10-12 18:49:25,653 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 14:50:13] 2025-10-12 18:49:25,653 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 14:50:13] 2025-10-12 18:49:25,663 | INFO     | fitting pss+swap vs Time
[2025-10-12 14:50:13] 2025-10-12 18:49:25,663 | INFO     | sum of square deviations: 4127549342.481024
[2025-10-12 14:50:13] 2025-10-12 18:49:25,668 | INFO     | sum of deviations: 38003016825.810104
[2025-10-12 14:50:13] 2025-10-12 18:49:25,668 | INFO     | mean x: 1760287694.443038
[2025-10-12 14:50:13] 2025-10-12 18:49:25,668 | INFO     | mean y: 2089458.0970464135
[2025-10-12 14:50:13] 2025-10-12 18:49:25,668 | INFO     | -- intersect: -16205165094.06166
[2025-10-12 14:50:13] 2025-10-12 18:49:25,668 | INFO     | intersect: -16205165094.06166
[2025-10-12 14:50:13] 2025-10-12 18:49:25,668 | INFO     | chi2: 3.6178610946125107
[2025-10-12 14:50:13] 2025-10-12 18:49:25,672 | INFO     | sum of square deviations: 3871799826.478458
[2025-10-12 14:50:13] 2025-10-12 18:49:25,674 | INFO     | sum of deviations: 50180234229.9353
[2025-10-12 14:50:13] 2025-10-12 18:49:25,674 | INFO     | mean x: 1760287541.9525862
[2025-10-12 14:50:13] 2025-10-12 18:49:25,674 | INFO     | mean y: 2096587.3577586208
[2025-10-12 14:50:13] 2025-10-12 18:49:25,674 | INFO     | -- intersect: -22812006704.63982
[2025-10-12 14:50:13] 2025-10-12 18:49:25,674 | INFO     | intersect: -22812006704.63982
[2025-10-12 14:50:13] 2025-10-12 18:49:25,675 | INFO     | chi2: 2.9364307744320124
[2025-10-12 14:50:13] 2025-10-12 18:49:25,675 | INFO     | current chi2=2.9364307744320124 (change=18.835170902366627 %)
[2025-10-12 14:50:13] 2025-10-12 18:49:25,675 | INFO     | right removable region: 231
[2025-10-12 14:50:13] 2025-10-12 18:49:25,677 | INFO     | sum of square deviations: 3871735776.478458
[2025-10-12 14:50:13] 2025-10-12 18:49:25,680 | INFO     | sum of deviations: -10811231051.249975
[2025-10-12 14:50:13] 2025-10-12 18:49:25,681 | INFO     | mean x: 1760287846.9525862
[2025-10-12 14:50:13] 2025-10-12 18:49:25,681 | INFO     | mean y: 2118442.25
[2025-10-12 14:50:13] 2025-10-12 18:49:25,682 | INFO     | -- intersect: 4917453508.6891985
[2025-10-12 14:50:13] 2025-10-12 18:49:25,682 | INFO     | intersect: 4917453508.6891985
[2025-10-12 14:50:13] 2025-10-12 18:49:25,683 | INFO     | chi2: 1.1654605788058945
[2025-10-12 14:50:13] 2025-10-12 18:49:25,684 | INFO     | current chi2=1.1654605788058945 (change=67.78592244623695 %)
[2025-10-12 14:50:13] 2025-10-12 18:49:25,684 | INFO     | sum of square deviations: 3626713110.431723
[2025-10-12 14:50:13] 2025-10-12 18:49:25,685 | INFO     | sum of deviations: -26524233109.854637
[2025-10-12 14:50:13] 2025-10-12 18:49:25,685 | INFO     | mean x: 1760287999.4625552
[2025-10-12 14:50:13] 2025-10-12 18:49:25,685 | INFO     | mean y: 2128168.370044053
[2025-10-12 14:50:13] 2025-10-12 18:49:25,686 | INFO     | -- intersect: 12876123937.135578
[2025-10-12 14:50:13] 2025-10-12 18:49:25,686 | INFO     | intersect: 12876123937.135578
[2025-10-12 14:50:13] 2025-10-12 18:49:25,692 | INFO     | chi2: 0.870244499947537
[2025-10-12 14:50:13] 2025-10-12 18:49:25,692 | INFO     | current chi2=0.870244499947537 (change=25.33042165706106 %)
[2025-10-12 14:50:13] 2025-10-12 18:49:25,692 | INFO     | sum of square deviations: 3392276109.711715
[2025-10-12 14:50:13] 2025-10-12 18:49:25,694 | INFO     | sum of deviations: -22494028485.594597
[2025-10-12 14:50:13] 2025-10-12 18:49:25,694 | INFO     | mean x: 1760288151.963964
[2025-10-12 14:50:13] 2025-10-12 18:49:25,694 | INFO     | mean y: 2125530.6756756757
[2025-10-12 14:50:13] 2025-10-12 18:49:25,694 | INFO     | -- intersect: 11674516147.634344
[2025-10-12 14:50:13] 2025-10-12 18:49:25,694 | INFO     | intersect: 11674516147.634344
[2025-10-12 14:50:13] 2025-10-12 18:49:25,694 | INFO     | chi2: 0.8585128312764195
[2025-10-12 14:50:13] 2025-10-12 18:49:25,695 | INFO     | current chi2=0.8585128312764195 (change=1.348088803988393 %)
[2025-10-12 14:50:13] 2025-10-12 18:49:25,695 | INFO     | left removable region: 30
[2025-10-12 14:50:13] 2025-10-12 18:49:25,695 | INFO     | sum of square deviations: 2517862159.343296
[2025-10-12 14:50:13] 2025-10-12 18:49:25,696 | INFO     | sum of deviations: 486285329.4179099
[2025-10-12 14:50:13] 2025-10-12 18:49:25,696 | INFO     | mean x: 1760288426.4328358
[2025-10-12 14:50:13] 2025-10-12 18:49:25,696 | INFO     | mean y: 2126271.1791044776
[2025-10-12 14:50:13] 2025-10-12 18:49:25,696 | INFO     | -- intersect: -337845650.6919827
[2025-10-12 14:50:13] 2025-10-12 18:49:25,696 | INFO     | intersect: -337845650.6919827
[2025-10-12 14:50:13] 2025-10-12 18:49:25,697 | INFO     | chi2: 0.08945780244138662
[2025-10-12 14:50:13] 2025-10-12 18:49:25,697 | INFO     | -- intersect: -337845650.6919827
[2025-10-12 14:50:13] 2025-10-12 18:49:25,697 | INFO     | current memory leak: 0.19 B/s (using 201 data points, chi2=0.09)
[2025-10-12 14:50:13] 2025-10-12 18:49:25,698 | INFO     | could have reported an average CPU frequency of 2608 MHz (11 samples)
[2025-10-12 14:50:13] 2025-10-12 18:49:25,698 | INFO     | ..............................
[2025-10-12 14:50:13] 2025-10-12 18:49:25,698 | INFO     | . Timing measurements:
[2025-10-12 14:50:13] 2025-10-12 18:49:25,698 | INFO     | . get job = 0 s
[2025-10-12 14:50:13] 2025-10-12 18:49:25,698 | INFO     | . initial setup = 6 s
[2025-10-12 14:50:13] 2025-10-12 18:49:25,699 | INFO     | . payload setup = 43 s
[2025-10-12 14:50:13] 2025-10-12 18:49:25,699 | INFO     | . stage-in = 0 s
[2025-10-12 14:50:13] 2025-10-12 18:49:25,699 | INFO     | . payload execution = 14460 s
[2025-10-12 14:50:13] 2025-10-12 18:49:25,699 | INFO     | . stage-out = 7 s
[2025-10-12 14:50:13] 2025-10-12 18:49:25,699 | INFO     | . log creation = 1 s
[2025-10-12 14:50:13] 2025-10-12 18:49:25,699 | INFO     | ..............................
[2025-10-12 14:50:13] 2025-10-12 18:49:25,729 | INFO     | time since job start (14626s) is within the limit (172800.0s)
[2025-10-12 14:50:13] 2025-10-12 18:49:25,809 | INFO     | 
[2025-10-12 14:50:13] 2025-10-12 18:49:25,809 | INFO     | job summary report
[2025-10-12 14:50:13] 2025-10-12 18:49:25,809 | INFO     | --------------------------------------------------
[2025-10-12 14:50:13] 2025-10-12 18:49:25,809 | INFO     | PanDA job id: 6839774658
[2025-10-12 14:50:13] 2025-10-12 18:49:25,809 | INFO     | task id: 46676269
[2025-10-12 14:50:13] 2025-10-12 18:49:25,809 | INFO     | errors: (none)
[2025-10-12 14:50:13] 2025-10-12 18:49:25,809 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 14:50:13] 2025-10-12 18:49:25,809 | INFO     | pilot state: finished 
[2025-10-12 14:50:13] 2025-10-12 18:49:25,809 | INFO     | transexitcode: 0
[2025-10-12 14:50:13] 2025-10-12 18:49:25,809 | INFO     | exeerrorcode: 0
[2025-10-12 14:50:13] 2025-10-12 18:49:25,809 | INFO     | exeerrordiag: 
[2025-10-12 14:50:13] 2025-10-12 18:49:25,810 | INFO     | exitcode: 0
[2025-10-12 14:50:13] 2025-10-12 18:49:25,810 | INFO     | exitmsg: OK
[2025-10-12 14:50:13] 2025-10-12 18:49:25,810 | INFO     | cpuconsumptiontime: 43846 s
[2025-10-12 14:50:13] 2025-10-12 18:49:25,810 | INFO     | nevents: 400
[2025-10-12 14:50:13] 2025-10-12 18:49:25,810 | INFO     | neventsw: 0
[2025-10-12 14:50:13] 2025-10-12 18:49:25,810 | INFO     | pid: 614974
[2025-10-12 14:50:13] 2025-10-12 18:49:25,810 | INFO     | pgrp: 614974
[2025-10-12 14:50:13] 2025-10-12 18:49:25,810 | INFO     | corecount: 8
[2025-10-12 14:50:13] 2025-10-12 18:49:25,810 | INFO     | event service: False
[2025-10-12 14:50:13] 2025-10-12 18:49:25,810 | INFO     | sizes: {0: 2348628, 1: 2348684, 2: 2348911, 3: 2348911, 4: 2348939, 15: 2348967, 26: 2349123, 36: 2349413, 37: 2349441, 14507: 2379730, 14508: 2379729, 14515: 2389
[2025-10-12 14:50:13] 2025-10-12 18:49:25,810 | INFO     | --------------------------------------------------
[2025-10-12 14:50:13] 2025-10-12 18:49:25,810 | INFO     | 
[2025-10-12 14:50:13] 2025-10-12 18:49:25,810 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-10-12 14:50:13] 2025-10-12 18:49:25,928 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 14:50:13] 2025-10-12 18:49:25,929 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 14:50:13] 2025-10-12 18:49:25,929 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 14:50:13] 2025-10-12 18:49:25,929 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 14:50:13] 2025-10-12 18:49:25,929 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 14:50:13] 2025-10-12 18:49:25,929 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 14:50:13] 2025-10-12 18:49:25,929 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 14:50:13] 2025-10-12 18:49:25,929 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 14:50:13] 2025-10-12 18:49:25,929 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 14:50:13] 2025-10-12 18:49:25,929 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 14:50:13] 2025-10-12 18:49:25,929 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 14:50:13] 2025-10-12 18:49:25,930 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 14:50:13] 2025-10-12 18:49:25,930 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 14:50:13] 2025-10-12 18:49:25,930 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 14:50:13] 2025-10-12 18:49:25,930 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 14:50:13] 2025-10-12 18:49:25,930 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 14:50:13] 2025-10-12 18:49:25,930 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 14:50:13] 2025-10-12 18:49:25,930 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 14:50:13] 2025-10-12 18:49:25,930 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 14:50:13] 2025-10-12 18:49:25,930 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 14:50:13] 2025-10-12 18:49:25,930 | INFO     | job 6839774658 has completed (purged errors)
[2025-10-12 14:50:13] 2025-10-12 18:49:25,931 | INFO     | overall cleanup function is called
[2025-10-12 14:50:13] 2025-10-12 18:49:26,939 | INFO     | --- collectZombieJob: --- 10, [614974]
[2025-10-12 14:50:13] 2025-10-12 18:49:26,939 | INFO     | zombie collector waiting for pid 614974
[2025-10-12 14:50:13] 2025-10-12 18:49:26,939 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 14:50:13] 2025-10-12 18:49:26,939 | INFO     | collected zombie processes
[2025-10-12 14:50:13] 2025-10-12 18:49:26,940 | INFO     | will attempt to kill all subprocesses of pid=614974
[2025-10-12 14:50:13] 2025-10-12 18:49:27,910 | INFO     | process IDs to be killed: [614974] (in reverse order)
[2025-10-12 14:50:13] 2025-10-12 18:49:28,256 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 14:50:13] 2025-10-12 18:49:28,257 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 14:50:13] 2025-10-12 18:49:28,371 | INFO     | did not find any defunct processes belonging to 614974
[2025-10-12 14:50:13] 2025-10-12 18:49:28,503 | INFO     | did not find any defunct processes belonging to 614974
[2025-10-12 14:50:13] 2025-10-12 18:49:28,504 | INFO     | ready for new job
[2025-10-12 14:50:13] 2025-10-12 18:49:28,504 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 14:50:13] 2025-10-12 18:49:28,528 | INFO     | ***************************************
[2025-10-12 14:50:13] 2025-10-12 18:49:28,528 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 14:50:13] 2025-10-12 18:49:28,529 | INFO     | ***************************************
[2025-10-12 14:50:13] 2025-10-12 18:49:28,529 | INFO     | 
[2025-10-12 14:50:13] 2025-10-12 18:49:28,560 | INFO     | architecture information:
[2025-10-12 14:50:13] 2025-10-12 18:49:28,570 | INFO     | executing command: cat /etc/os-release
[2025-10-12 14:50:13] 2025-10-12 18:49:28,632 | INFO     | cat /etc/os-release:
[2025-10-12 14:50:13] NAME="CentOS Linux"
[2025-10-12 14:50:13] VERSION="7 (Core)"
[2025-10-12 14:50:13] ID="centos"
[2025-10-12 14:50:13] ID_LIKE="rhel fedora"
[2025-10-12 14:50:13] VERSION_ID="7"
[2025-10-12 14:50:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 14:50:13] ANSI_COLOR="0;31"
[2025-10-12 14:50:13] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 14:50:13] HOME_URL="https://www.centos.org/"
[2025-10-12 14:50:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 14:50:13] 
[2025-10-12 14:50:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 14:50:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 14:50:13] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 14:50:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 14:50:13] 
[2025-10-12 14:50:13] 2025-10-12 18:49:28,633 | INFO     | ***************************************
[2025-10-12 14:50:13] 2025-10-12 18:49:29,138 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-10-12 14:50:13] 2025-10-12 18:49:29,206 | INFO     | sufficient remaining disk space (94466211840 B)
[2025-10-12 14:50:13] 2025-10-12 18:49:29,206 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 14:50:13] 2025-10-12 18:49:29,206 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 14:50:13] 2025-10-12 18:49:29,206 | INFO     | update_server=False
[2025-10-12 14:50:13] 2025-10-12 18:49:29,206 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 14:50:13] 2025-10-12 18:49:29,216 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 14:50:13] 2025-10-12 18:49:29,216 | INFO     | aborting loop
[2025-10-12 14:50:13] 2025-10-12 18:49:29,393 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 14:50:13] 2025-10-12 18:49:29,871 | INFO     | all data control threads have been joined
[2025-10-12 14:50:13] 2025-10-12 18:49:30,035 | INFO     | all job control threads have been joined
[2025-10-12 14:50:13] 2025-10-12 18:49:30,213 | INFO     | [job] retrieve thread has finished
[2025-10-12 14:50:13] 2025-10-12 18:49:30,224 | INFO     | [job] job monitor thread has finished
[2025-10-12 14:50:13] 2025-10-12 18:49:30,284 | INFO     | [data] copytool_in thread has finished
[2025-10-12 14:50:13] 2025-10-12 18:49:30,285 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 14:50:13] 2025-10-12 18:49:30,556 | INFO     | all payload control threads have been joined
[2025-10-12 14:50:13] 2025-10-12 18:49:30,661 | INFO     | [payload] failed_post thread has finished
[2025-10-12 14:50:13] 2025-10-12 18:49:30,662 | INFO     | [payload] validate_post thread has finished
[2025-10-12 14:50:13] 2025-10-12 18:49:30,667 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 14:50:13] 2025-10-12 18:49:30,672 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 14:50:13] 2025-10-12 18:49:30,867 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 14:50:13] 2025-10-12 18:49:30,877 | INFO     | [data] control thread has finished
[2025-10-12 14:50:13] 2025-10-12 18:49:31,041 | INFO     | [job] control thread has finished
[2025-10-12 14:50:13] 2025-10-12 18:49:31,042 | INFO     | [job] validate thread has finished
[2025-10-12 14:50:13] 2025-10-12 18:49:31,049 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 14:50:13] 2025-10-12 18:49:31,400 | INFO     | [data] copytool_out thread has finished
[2025-10-12 14:50:13] 2025-10-12 18:49:31,561 | INFO     | [payload] control thread has finished
[2025-10-12 14:50:13] 2025-10-12 18:49:31,873 | INFO     | [job] queue monitor thread has finished
[2025-10-12 14:50:13] 2025-10-12 18:49:32,305 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 14:50:13] 2025-10-12 18:49:36,316 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 14:50:13] 2025-10-12 18:50:00,262 | INFO     | PID=597922 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-12 14:50:13] 2025-10-12 18:50:00,263 | INFO     | .. there are 48 such processes running
[2025-10-12 14:50:13] 2025-10-12 18:50:00,263 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 14:50:13] 2025-10-12 18:50:00,263 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 14:50:13] 2025-10-12 18:50:00,263 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 14:50:13] 2025-10-12 18:50:05,172 | INFO     | [monitor] cgroup control has ended
[2025-10-12 14:50:13] 2025-10-12 18:50:05,636 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140181818959680)>', '<ExcThread(monitor, started 140181315233536)>']
[2025-10-12 14:50:13] 2025-10-12 18:50:06,307 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 14:50:13] 2025-10-12 18:50:06,307 | INFO     | [monitor] control thread has ended
[2025-10-12 14:50:13] 2025-10-12 18:50:10,662 | INFO     | all workflow threads have been joined
[2025-10-12 14:50:13] 2025-10-12 18:50:10,662 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 14:50:13] 2025-10-12 18:50:10,663 | INFO     | traces error code: 0
[2025-10-12 14:50:13] 2025-10-12 18:50:10,663 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 14:50:13] 2025-10-12 18:50:11,574 [wrapper] ==== pilot stdout END ====
[2025-10-12 14:50:13] 2025-10-12 18:50:11,593 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 14:50:13] 2025-10-12 18:50:11,631 [wrapper] pilotpid: 597922
[2025-10-12 14:50:13] 2025-10-12 18:50:11,649 [wrapper] Pilot exit status: 0
[2025-10-12 14:50:13] 2025-10-12 18:50:11,857 [wrapper] pandaids: 6839774658
[2025-10-12 14:50:13] 2025-10-12 18:50:12,373 [wrapper] cleanup supervisor_pilot 1519452 597923
[2025-10-12 14:50:13] 2025-10-12 18:50:12,407 [wrapper] Test setup, not cleaning
[2025-10-12 14:50:13] 2025-10-12 18:50:12,435 [wrapper] apfmon messages muted
[2025-10-12 14:50:13] 2025-10-12 18:50:12,473 [wrapper] ==== wrapper stdout END ====
[2025-10-12 14:50:13] 2025-10-12 18:50:12,522 [wrapper] ==== wrapper stderr END ====
[2025-10-12 14:50:13]  *** Error codes and diagnostics ***
[2025-10-12 14:50:13]     "exeErrorCode": 0,
[2025-10-12 14:50:13]     "exeErrorDiag": "",
[2025-10-12 14:50:13]     "pilotErrorCode": 0,
[2025-10-12 14:50:13]     "pilotErrorDiag": "",
[2025-10-12 14:50:13]  *** Listing of results directory ***
[2025-10-12 14:50:13] total 416244
[2025-10-12 14:50:13] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 04:37 pilot3.tar.gz
[2025-10-12 14:50:13] -rwx------. 1 boincer umatlas     36292 Oct 12 04:43 runpilot2-wrapper.sh
[2025-10-12 14:50:13] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 04:43 queuedata.json
[2025-10-12 14:50:13] -rw-r--r--. 1 boincer umatlas       100 Oct 12 10:44 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 14:50:13] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 10:44 run_atlas
[2025-10-12 14:50:13] -rw-r--r--. 1 boincer umatlas       105 Oct 12 10:44 job.xml
[2025-10-12 14:50:13] -rw-r--r--. 2 boincer umatlas 221057884 Oct 12 10:44 EVNT.46676267._003544.pool.root.1
[2025-10-12 14:50:13] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 10:44 start_atlas.sh
[2025-10-12 14:50:13] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 10:44 shared
[2025-10-12 14:50:13] -rw-r--r--. 2 boincer umatlas    569679 Oct 12 10:44 input.tar.gz
[2025-10-12 14:50:13] -rw-r--r--. 1 boincer umatlas         0 Oct 12 10:44 boinc_lockfile
[2025-10-12 14:50:13] -rw-r--r--. 1 boincer umatlas      2549 Oct 12 10:44 pandaJob.out
[2025-10-12 14:50:13] -rw-------. 1 boincer umatlas    975528 Oct 12 10:45 agis_schedconf.cvmfs.json
[2025-10-12 14:50:13] drwx------. 5 boincer umatlas      4096 Oct 12 10:45 pilot3
[2025-10-12 14:50:13] -rw-r--r--. 1 boincer umatlas      6862 Oct 12 14:46 init_data.xml
[2025-10-12 14:50:13] -rw-------. 1 boincer umatlas 196875649 Oct 12 14:47 HITS.46676269._074550.pool.root.1
[2025-10-12 14:50:13] -rw-r--r--. 1 boincer umatlas       531 Oct 12 14:47 boinc_task_state.xml
[2025-10-12 14:50:13] -rw-------. 1 boincer umatlas      1044 Oct 12 14:48 memory_monitor_summary.json
[2025-10-12 14:50:13] -rw-------. 1 boincer umatlas   1560580 Oct 12 14:48 agis_ddmendpoints.agis.ALL.json
[2025-10-12 14:50:13] -rw-------. 1 boincer umatlas    442545 Oct 12 14:48 log.46676269._074550.job.log.tgz.1
[2025-10-12 14:50:13] -rw-------. 1 boincer umatlas        95 Oct 12 14:49 pilot_heartbeat.json
[2025-10-12 14:50:13] -rw-------. 1 boincer umatlas      7835 Oct 12 14:49 heartbeat.json
[2025-10-12 14:50:13] -rw-------. 1 boincer umatlas      4823 Oct 12 14:50 pilotlog.txt
[2025-10-12 14:50:13] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 14:50 boinc_mmap_file
[2025-10-12 14:50:13] -rw-r--r--. 1 boincer umatlas        28 Oct 12 14:50 wrapper_checkpoint.txt
[2025-10-12 14:50:13] -rw-------. 1 boincer umatlas   1754622 Oct 12 14:50 log.46676269._074550.job.log.1
[2025-10-12 14:50:13] -rw-------. 1 boincer umatlas       357 Oct 12 14:50 output.list
[2025-10-12 14:50:13] -rw-r--r--. 1 boincer umatlas       620 Oct 12 14:50 runtime_log
[2025-10-12 14:50:13] -rw-------. 1 boincer umatlas   2211840 Oct 12 14:50 result.tar.gz
[2025-10-12 14:50:13] -rw-r--r--. 1 boincer umatlas      8714 Oct 12 14:50 runtime_log.err
[2025-10-12 14:50:13] -rw-------. 1 boincer umatlas       658 Oct 12 14:50 1zULDmwq6R8n9Rq4apOajLDm4fhM0noT9bVof3QYDmAWTMDmKh5zvm.diag
[2025-10-12 14:50:13] -rw-r--r--. 1 boincer umatlas     21035 Oct 12 14:50 stderr.txt
[2025-10-12 14:50:13] HITS file was successfully produced:
[2025-10-12 14:50:13] -rw-------. 1 boincer umatlas 196875649 Oct 12 14:47 shared/HITS.pool.root.1
[2025-10-12 14:50:13]  *** Contents of shared directory: ***
[2025-10-12 14:50:13] total 410888
[2025-10-12 14:50:13] -rw-r--r--. 2 boincer umatlas 221057884 Oct 12 10:44 ATLAS.root_0
[2025-10-12 14:50:13] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 10:44 start_atlas.sh
[2025-10-12 14:50:13] -rw-r--r--. 2 boincer umatlas    569679 Oct 12 10:44 input.tar.gz
[2025-10-12 14:50:13] -rw-------. 1 boincer umatlas 196875649 Oct 12 14:47 HITS.pool.root.1
[2025-10-12 14:50:13] -rw-------. 1 boincer umatlas   2211840 Oct 12 14:50 result.tar.gz
14:50:14 (587993): run_atlas exited; CPU time 44521.526485
14:50:14 (587993): called boinc_finish(0)

</stderr_txt>
]]>

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