Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
02:28:00 (3859200): wrapper (7.7.26015): starting
02:28:00 (3859200): wrapper: running run_atlas (--nthreads 4)
[2025-10-13 02:28:00] Arguments: --nthreads 4
[2025-10-13 02:28:00] Threads: 4
[2025-10-13 02:28:00] Checking for CVMFS
[2025-10-13 02:28:00] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 02:28:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 02:28:00] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 02:28:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 02:28:00] 2.9.2.0 2032506 5026 104456 151642 2 56 26400106 36864001 0 130560 0 4518790 99.992 170758 877 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-13 02:28:00] CVMFS is ok
[2025-10-13 02:28:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 02:28:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 02:28:00] Further information can be found at the LHC@home message board.
[2025-10-13 02:28:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 02:28:00] Checking for apptainer binary...
[2025-10-13 02:28:00] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 02:28:00] Running /usr/bin/apptainer --version
[2025-10-13 02:28:00] apptainer version 1.4.1-1.1
[2025-10-13 02:28:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 02:28:00] madmaxA277
[2025-10-13 02:28:00] apptainer works
[2025-10-13 02:28:00] Set ATHENA_PROC_NUMBER=4
[2025-10-13 02:28:00] Set ATHENA_CORE_NUMBER=4
[2025-10-13 02:28:00] Starting ATLAS job with PandaID=6839867467
[2025-10-13 02:28:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 03:40:35]  *** The last 200 lines of the pilot log: ***
[2025-10-13 03:40:35] 2025-10-13 01:40:04,355 | INFO     | executing command: cat /etc/os-release
[2025-10-13 03:40:35] 2025-10-13 01:40:04,369 | INFO     | cat /etc/os-release:
[2025-10-13 03:40:35] NAME="CentOS Linux"
[2025-10-13 03:40:35] VERSION="7 (Core)"
[2025-10-13 03:40:35] ID="centos"
[2025-10-13 03:40:35] ID_LIKE="rhel fedora"
[2025-10-13 03:40:35] VERSION_ID="7"
[2025-10-13 03:40:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 03:40:35] ANSI_COLOR="0;31"
[2025-10-13 03:40:35] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 03:40:35] HOME_URL="https://www.centos.org/"
[2025-10-13 03:40:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 03:40:35] 
[2025-10-13 03:40:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 03:40:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 03:40:35] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 03:40:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 03:40:35] 
[2025-10-13 03:40:35] 2025-10-13 01:40:04,369 | INFO     | ***************************************
[2025-10-13 03:40:35] 2025-10-13 01:40:04,872 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-13 03:40:35] 2025-10-13 01:40:04,886 | INFO     | sufficient remaining disk space (333280444416 B)
[2025-10-13 03:40:35] 2025-10-13 01:40:04,886 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 03:40:35] 2025-10-13 01:40:04,886 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 03:40:35] 2025-10-13 01:40:04,886 | INFO     | update_server=False
[2025-10-13 03:40:35] 2025-10-13 01:40:04,886 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 03:40:35] 2025-10-13 01:40:04,886 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 03:40:35] 2025-10-13 01:40:04,954 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 03:40:35] 2025-10-13 01:40:04,988 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 03:40:35] 2025-10-13 01:40:04,988 | INFO     | aborting loop
[2025-10-13 03:40:35] 2025-10-13 01:40:05,044 | INFO     | all job control threads have been joined
[2025-10-13 03:40:35] 2025-10-13 01:40:05,389 | INFO     | all payload control threads have been joined
[2025-10-13 03:40:35] 2025-10-13 01:40:05,491 | INFO     | all data control threads have been joined
[2025-10-13 03:40:35] 2025-10-13 01:40:05,686 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 03:40:35] 2025-10-13 01:40:05,892 | INFO     | [job] retrieve thread has finished
[2025-10-13 03:40:35] 2025-10-13 01:40:05,892 | INFO     | [job] queue monitor thread has finished
[2025-10-13 03:40:35] 2025-10-13 01:40:05,993 | INFO     | [job] job monitor thread has finished
[2025-10-13 03:40:35] 2025-10-13 01:40:06,011 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 03:40:35] 2025-10-13 01:40:06,050 | INFO     | [job] control thread has finished
[2025-10-13 03:40:35] 2025-10-13 01:40:06,057 | INFO     | [payload] failed_post thread has finished
[2025-10-13 03:40:35] 2025-10-13 01:40:06,394 | INFO     | [payload] control thread has finished
[2025-10-13 03:40:35] 2025-10-13 01:40:06,409 | INFO     | [job] validate thread has finished
[2025-10-13 03:40:35] 2025-10-13 01:40:06,497 | INFO     | [data] control thread has finished
[2025-10-13 03:40:35] 2025-10-13 01:40:06,595 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 03:40:35] 2025-10-13 01:40:06,608 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 03:40:35] 2025-10-13 01:40:06,661 | INFO     | [payload] validate_post thread has finished
[2025-10-13 03:40:35] 2025-10-13 01:40:06,844 | INFO     | [data] copytool_in thread has finished
[2025-10-13 03:40:35] 2025-10-13 01:40:06,960 | INFO     | [data] copytool_out thread has finished
[2025-10-13 03:40:35] 2025-10-13 01:40:09,693 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 03:40:35] 2025-10-13 01:40:12,788 | INFO     | [monitor] cgroup control has ended
[2025-10-13 03:40:35] 2025-10-13 01:40:14,979 | INFO     | job.realtimelogging is not enabled
[2025-10-13 03:40:35] 2025-10-13 01:40:15,984 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 03:40:35] 2025-10-13 01:40:18,052 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140018612721472)>', '<ExcThread(monitor, started 140017678677760)>']
[2025-10-13 03:40:35] 2025-10-13 01:40:23,077 | INFO     | all workflow threads have been joined
[2025-10-13 03:40:35] 2025-10-13 01:40:23,077 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 03:40:35] 2025-10-13 01:40:23,077 | INFO     | traces error code: 0
[2025-10-13 03:40:35] 2025-10-13 01:40:23,077 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 03:40:35] 2025-10-13 01:40:35,366 | INFO     | PID=3862995 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 03:40:35] 2025-10-13 01:40:35,366 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 03:40:35] 2025-10-13 01:40:35,366 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 03:40:35] 2025-10-13 01:40:35,366 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 03:40:35] 2025-10-13 01:40:35,366 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 03:40:35] 2025-10-13 01:40:35,366 | INFO     | [monitor] control thread has ended
[2025-10-13 03:40:35] 2025-10-13 01:40:35,443 [wrapper] ==== pilot stdout END ====
[2025-10-13 03:40:35] 2025-10-13 01:40:35,447 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 03:40:35] 2025-10-13 01:40:35,450 [wrapper] pilotpid: 3862995
[2025-10-13 03:40:35] 2025-10-13 01:40:35,454 [wrapper] Pilot exit status: 0
[2025-10-13 03:40:35] 2025-10-13 01:40:35,465 [wrapper] pandaids: 6839867467
[2025-10-13 03:40:35] 2025-10-13 01:40:35,485 [wrapper] cleanup supervisor_pilot 3880940 3862996
[2025-10-13 03:40:35] 2025-10-13 01:40:35,489 [wrapper] Test setup, not cleaning
[2025-10-13 03:40:35] 2025-10-13 01:40:35,493 [wrapper] apfmon messages muted
[2025-10-13 03:40:35] 2025-10-13 01:40:35,496 [wrapper] ==== wrapper stdout END ====
[2025-10-13 03:40:35] 2025-10-13 01:40:35,500 [wrapper] ==== wrapper stderr END ====
[2025-10-13 03:40:35]  *** Error codes and diagnostics ***
[2025-10-13 03:40:35]     "exeErrorCode": 0,
[2025-10-13 03:40:35]     "exeErrorDiag": "",
[2025-10-13 03:40:35]     "pilotErrorCode": 0,
[2025-10-13 03:40:35]     "pilotErrorDiag": "",
[2025-10-13 03:40:35]  *** Listing of results directory ***
[2025-10-13 03:40:35] total 414912
[2025-10-13 03:40:35] -rw-r--r-- 1 boinc boinc    557409 Oct 12 12:38 pilot3.tar.gz
[2025-10-13 03:40:35] -rw-r--r-- 1 boinc boinc      5112 Oct 12 12:52 queuedata.json
[2025-10-13 03:40:35] -rwx------ 1 boinc boinc     36292 Oct 12 12:53 runpilot2-wrapper.sh
[2025-10-13 03:40:35] -rw-r--r-- 1 boinc boinc       100 Oct 13 02:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 03:40:35] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 02:28 run_atlas
[2025-10-13 03:40:35] -rw-r--r-- 1 boinc boinc       105 Oct 13 02:28 job.xml
[2025-10-13 03:40:35] -rw-r--r-- 2 boinc boinc 219497559 Oct 13 02:28 EVNT.46676267._003633.pool.root.1
[2025-10-13 03:40:35] -rw-r--r-- 2 boinc boinc    569683 Oct 13 02:28 input.tar.gz
[2025-10-13 03:40:35] -rw-r--r-- 2 boinc boinc     15120 Oct 13 02:28 start_atlas.sh
[2025-10-13 03:40:35] drwxrwx--x 2 boinc boinc      4096 Oct 13 02:28 shared
[2025-10-13 03:40:35] -rw-r--r-- 1 boinc boinc         0 Oct 13 02:28 boinc_setup_complete
[2025-10-13 03:40:35] -rw-r--r-- 1 boinc boinc      6373 Oct 13 02:28 init_data.xml
[2025-10-13 03:40:35] -rw-r--r-- 1 boinc boinc         0 Oct 13 02:28 boinc_lockfile
[2025-10-13 03:40:35] -rw-r--r-- 1 boinc boinc      2550 Oct 13 02:28 pandaJob.out
[2025-10-13 03:40:35] -rw------- 1 boinc boinc    975603 Oct 13 02:28 agis_schedconf.cvmfs.json
[2025-10-13 03:40:35] -rw------- 1 boinc boinc   1560580 Oct 13 02:28 agis_ddmendpoints.agis.ALL.json
[2025-10-13 03:40:35] drwx------ 5 boinc boinc      4096 Oct 13 02:28 pilot3
[2025-10-13 03:40:35] -rw------- 1 boinc boinc 199689058 Oct 13 03:39 HITS.46676269._076346.pool.root.1
[2025-10-13 03:40:35] -rw-r--r-- 1 boinc boinc       529 Oct 13 03:39 boinc_task_state.xml
[2025-10-13 03:40:35] -rw------- 1 boinc boinc      1022 Oct 13 03:39 memory_monitor_summary.json
[2025-10-13 03:40:35] -rw------- 1 boinc boinc    254097 Oct 13 03:39 log.46676269._076346.job.log.tgz.1
[2025-10-13 03:40:35] -rw------- 1 boinc boinc      7776 Oct 13 03:40 heartbeat.json
[2025-10-13 03:40:35] -rw-r--r-- 1 boinc boinc        27 Oct 13 03:40 wrapper_checkpoint.txt
[2025-10-13 03:40:35] -rw-r--r-- 1 boinc boinc      8192 Oct 13 03:40 boinc_mmap_file
[2025-10-13 03:40:35] -rw------- 1 boinc boinc        95 Oct 13 03:40 pilot_heartbeat.json
[2025-10-13 03:40:35] -rw------- 1 boinc boinc       747 Oct 13 03:40 pilotlog.txt
[2025-10-13 03:40:35] -rw------- 1 boinc boinc    640284 Oct 13 03:40 log.46676269._076346.job.log.1
[2025-10-13 03:40:35] -rw------- 1 boinc boinc       357 Oct 13 03:40 output.list
[2025-10-13 03:40:35] -rw-r--r-- 1 boinc boinc       620 Oct 13 03:40 runtime_log
[2025-10-13 03:40:35] -rw------- 1 boinc boinc    911360 Oct 13 03:40 result.tar.gz
[2025-10-13 03:40:35] -rw-r--r-- 1 boinc boinc      8797 Oct 13 03:40 runtime_log.err
[2025-10-13 03:40:35] -rw------- 1 boinc boinc       662 Oct 13 03:40 Q19KDmus8R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmlVjNDmigHvAn.diag
[2025-10-13 03:40:35] -rw-r--r-- 1 boinc boinc      8983 Oct 13 03:40 stderr.txt
[2025-10-13 03:40:35] HITS file was successfully produced:
[2025-10-13 03:40:35] -rw------- 1 boinc boinc 199689058 Oct 13 03:39 shared/HITS.pool.root.1
[2025-10-13 03:40:35]  *** Contents of shared directory: ***
[2025-10-13 03:40:35] total 410844
[2025-10-13 03:40:35] -rw-r--r-- 2 boinc boinc 219497559 Oct 13 02:28 ATLAS.root_0
[2025-10-13 03:40:35] -rw-r--r-- 2 boinc boinc    569683 Oct 13 02:28 input.tar.gz
[2025-10-13 03:40:35] -rw-r--r-- 2 boinc boinc     15120 Oct 13 02:28 start_atlas.sh
[2025-10-13 03:40:35] -rw------- 1 boinc boinc 199689058 Oct 13 03:39 HITS.pool.root.1
[2025-10-13 03:40:35] -rw------- 1 boinc boinc    911360 Oct 13 03:40 result.tar.gz
03:40:58 (3859200): run_atlas exited; CPU time 16070.857148
03:40:58 (3859200): called boinc_finish(0)

</stderr_txt>
]]>

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