Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:14:49 (25454): wrapper (7.7.26015): starting
01:14:49 (25454): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 01:14:49] Arguments: --nthreads 8
[2025-10-13 01:14:49] Threads: 8
[2025-10-13 01:14:49] Checking for CVMFS
[2025-10-13 01:14:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 01:14:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 01:14:51] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 01:14:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 01:14:52] 2.11.2.0 22738 221070 135996 151640 1 211 13318846 25165824 4628 130560 0 120035245 99.882 65506702 3165 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-10-13 01:14:52] CVMFS is ok
[2025-10-13 01:14:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 01:14:52] Checking for apptainer binary...
[2025-10-13 01:14:52] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 01:14:52] Running /usr/bin/apptainer --version
[2025-10-13 01:14:52] apptainer version 1.3.2-1.el7
[2025-10-13 01:14:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 01:14:56] cg-vwn395.simple-grid.lan
[2025-10-13 01:14:56] apptainer works
[2025-10-13 01:14:56] Set ATHENA_PROC_NUMBER=8
[2025-10-13 01:14:56] Set ATHENA_CORE_NUMBER=8
[2025-10-13 01:14:56] Starting ATLAS job with PandaID=6839867435
[2025-10-13 01:14:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 05:40:57]  *** The last 200 lines of the pilot log: ***
[2025-10-13 05:40:57] 2025-10-13 03:39:51,471 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 05:40:57] 2025-10-13 03:39:51,471 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 05:40:57] 2025-10-13 03:39:51,477 | INFO     | fitting pss+swap vs Time
[2025-10-13 05:40:57] 2025-10-13 03:39:51,478 | INFO     | sum of square deviations: 4787066500.0
[2025-10-13 05:40:57] 2025-10-13 03:39:51,480 | INFO     | sum of deviations: 46759542069.99973
[2025-10-13 05:40:57] 2025-10-13 03:39:51,480 | INFO     | mean x: 1760319109.0
[2025-10-13 05:40:57] 2025-10-13 03:39:51,480 | INFO     | mean y: 2473527.004016064
[2025-10-13 05:40:57] 2025-10-13 03:39:51,480 | INFO     | -- intersect: -17192131025.472942
[2025-10-13 05:40:57] 2025-10-13 03:39:51,480 | INFO     | intersect: -17192131025.472942
[2025-10-13 05:40:57] 2025-10-13 03:39:51,481 | INFO     | chi2: 6.630868504698828
[2025-10-13 05:40:57] 2025-10-13 03:39:51,481 | INFO     | sum of square deviations: 4504437945.0
[2025-10-13 05:40:57] 2025-10-13 03:39:51,483 | INFO     | sum of deviations: 62213938582.5
[2025-10-13 05:40:57] 2025-10-13 03:39:51,483 | INFO     | mean x: 1760318956.5
[2025-10-13 05:40:57] 2025-10-13 03:39:51,483 | INFO     | mean y: 2481720.979508197
[2025-10-13 05:40:57] 2025-10-13 03:39:51,483 | INFO     | -- intersect: -24310512881.7914
[2025-10-13 05:40:57] 2025-10-13 03:39:51,484 | INFO     | intersect: -24310512881.7914
[2025-10-13 05:40:57] 2025-10-13 03:39:51,484 | INFO     | chi2: 5.919151619785464
[2025-10-13 05:40:57] 2025-10-13 03:39:51,484 | INFO     | current chi2=5.919151619785464 (change=10.7333886112961 %)
[2025-10-13 05:40:57] 2025-10-13 03:39:51,484 | INFO     | right removable region: 243
[2025-10-13 05:40:57] 2025-10-13 03:39:51,485 | INFO     | sum of square deviations: 4504437945.0
[2025-10-13 05:40:57] 2025-10-13 03:39:51,486 | INFO     | sum of deviations: -39265813947.999954
[2025-10-13 05:40:57] 2025-10-13 03:39:51,487 | INFO     | mean x: 1760319261.5
[2025-10-13 05:40:57] 2025-10-13 03:39:51,487 | INFO     | mean y: 2519906.2377049183
[2025-10-13 05:40:57] 2025-10-13 03:39:51,487 | INFO     | -- intersect: 15347468478.09325
[2025-10-13 05:40:57] 2025-10-13 03:39:51,487 | INFO     | intersect: 15347468478.09325
[2025-10-13 05:40:57] 2025-10-13 03:39:51,488 | INFO     | chi2: 1.9752322081291034
[2025-10-13 05:40:57] 2025-10-13 03:39:51,488 | INFO     | current chi2=1.9752322081291034 (change=70.21156117438619 %)
[2025-10-13 05:40:57] 2025-10-13 03:39:51,488 | INFO     | sum of square deviations: 4233158440.0
[2025-10-13 05:40:57] 2025-10-13 03:39:51,490 | INFO     | sum of deviations: -71794236639.00002
[2025-10-13 05:40:57] 2025-10-13 03:39:51,490 | INFO     | mean x: 1760319414.0
[2025-10-13 05:40:57] 2025-10-13 03:39:51,490 | INFO     | mean y: 2538050.9874476986
[2025-10-13 05:40:57] 2025-10-13 03:39:51,491 | INFO     | -- intersect: 29857501043.80702
[2025-10-13 05:40:57] 2025-10-13 03:39:51,491 | INFO     | intersect: 29857501043.80702
[2025-10-13 05:40:57] 2025-10-13 03:39:51,491 | INFO     | chi2: 0.9997473491128115
[2025-10-13 05:40:57] 2025-10-13 03:39:51,491 | INFO     | current chi2=0.9997473491128115 (change=49.385831954423715 %)
[2025-10-13 05:40:57] 2025-10-13 03:39:51,492 | INFO     | sum of square deviations: 3972995422.5
[2025-10-13 05:40:57] 2025-10-13 03:39:51,494 | INFO     | sum of deviations: -67723191676.99999
[2025-10-13 05:40:57] 2025-10-13 03:39:51,494 | INFO     | mean x: 1760319566.5
[2025-10-13 05:40:57] 2025-10-13 03:39:51,494 | INFO     | mean y: 2535640.9743589745
[2025-10-13 05:40:57] 2025-10-13 03:39:51,494 | INFO     | -- intersect: 30008726622.14533
[2025-10-13 05:40:57] 2025-10-13 03:39:51,494 | INFO     | intersect: 30008726622.14533
[2025-10-13 05:40:57] 2025-10-13 03:39:51,494 | INFO     | chi2: 0.9898611869004175
[2025-10-13 05:40:57] 2025-10-13 03:39:51,495 | INFO     | current chi2=0.9898611869004175 (change=0.9888660591265512 %)
[2025-10-13 05:40:57] 2025-10-13 03:39:51,495 | INFO     | left removable region: 30
[2025-10-13 05:40:57] 2025-10-13 03:39:51,495 | INFO     | sum of square deviations: 2996454322.0
[2025-10-13 05:40:57] 2025-10-13 03:39:51,497 | INFO     | sum of deviations: -29247650358.000004
[2025-10-13 05:40:57] 2025-10-13 03:39:51,497 | INFO     | mean x: 1760319841.0
[2025-10-13 05:40:57] 2025-10-13 03:39:51,497 | INFO     | mean y: 2531303.187793427
[2025-10-13 05:40:57] 2025-10-13 03:39:51,497 | INFO     | -- intersect: 17184578381.23371
[2025-10-13 05:40:57] 2025-10-13 03:39:51,497 | INFO     | intersect: 17184578381.23371
[2025-10-13 05:40:57] 2025-10-13 03:39:51,497 | INFO     | chi2: 0.1629532201168234
[2025-10-13 05:40:57] 2025-10-13 03:39:51,498 | INFO     | -- intersect: 17184578381.23371
[2025-10-13 05:40:57] 2025-10-13 03:39:51,498 | INFO     | current memory leak: -9.76 B/s (using 213 data points, chi2=0.16)
[2025-10-13 05:40:57] 2025-10-13 03:39:51,498 | INFO     | could have reported an average CPU frequency of 1999 MHz (12 samples)
[2025-10-13 05:40:57] 2025-10-13 03:39:51,499 | INFO     | ..............................
[2025-10-13 05:40:57] 2025-10-13 03:39:51,499 | INFO     | . Timing measurements:
[2025-10-13 05:40:57] 2025-10-13 03:39:51,499 | INFO     | . get job = 0 s
[2025-10-13 05:40:57] 2025-10-13 03:39:51,499 | INFO     | . initial setup = 9 s
[2025-10-13 05:40:57] 2025-10-13 03:39:51,499 | INFO     | . payload setup = 117 s
[2025-10-13 05:40:57] 2025-10-13 03:39:51,499 | INFO     | . stage-in = 0 s
[2025-10-13 05:40:57] 2025-10-13 03:39:51,499 | INFO     | . payload execution = 15303 s
[2025-10-13 05:40:57] 2025-10-13 03:39:51,499 | INFO     | . stage-out = 4 s
[2025-10-13 05:40:57] 2025-10-13 03:39:51,499 | INFO     | . log creation = 1 s
[2025-10-13 05:40:57] 2025-10-13 03:39:51,499 | INFO     | ..............................
[2025-10-13 05:40:57] 2025-10-13 03:39:51,908 | INFO     | 
[2025-10-13 05:40:57] 2025-10-13 03:39:51,908 | INFO     | job summary report
[2025-10-13 05:40:57] 2025-10-13 03:39:51,909 | INFO     | --------------------------------------------------
[2025-10-13 05:40:57] 2025-10-13 03:39:51,909 | INFO     | PanDA job id: 6839867435
[2025-10-13 05:40:57] 2025-10-13 03:39:51,909 | INFO     | task id: 46676269
[2025-10-13 05:40:57] 2025-10-13 03:39:51,909 | INFO     | errors: (none)
[2025-10-13 05:40:57] 2025-10-13 03:39:51,909 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 05:40:57] 2025-10-13 03:39:51,909 | INFO     | pilot state: finished 
[2025-10-13 05:40:57] 2025-10-13 03:39:51,909 | INFO     | transexitcode: 0
[2025-10-13 05:40:57] 2025-10-13 03:39:51,909 | INFO     | exeerrorcode: 0
[2025-10-13 05:40:57] 2025-10-13 03:39:51,909 | INFO     | exeerrordiag: 
[2025-10-13 05:40:57] 2025-10-13 03:39:51,909 | INFO     | exitcode: 0
[2025-10-13 05:40:57] 2025-10-13 03:39:51,909 | INFO     | exitmsg: OK
[2025-10-13 05:40:57] 2025-10-13 03:39:51,910 | INFO     | cpuconsumptiontime: 57274 s
[2025-10-13 05:40:57] 2025-10-13 03:39:51,910 | INFO     | nevents: 400
[2025-10-13 05:40:57] 2025-10-13 03:39:51,910 | INFO     | neventsw: 0
[2025-10-13 05:40:57] 2025-10-13 03:39:51,910 | INFO     | pid: 3355
[2025-10-13 05:40:57] 2025-10-13 03:39:51,910 | INFO     | pgrp: 3355
[2025-10-13 05:40:57] 2025-10-13 03:39:51,910 | INFO     | corecount: 8
[2025-10-13 05:40:57] 2025-10-13 03:39:51,910 | INFO     | event service: False
[2025-10-13 05:40:57] 2025-10-13 03:39:51,910 | INFO     | sizes: {0: 2348029, 1: 2348714, 2: 2348913, 13: 2348913, 23: 2348969, 34: 2348997, 45: 2349153, 56: 2349181, 66: 2349209, 77: 2349237, 83: 2349555, 88: 2349891, 15
[2025-10-13 05:40:57] 2025-10-13 03:39:51,910 | INFO     | --------------------------------------------------
[2025-10-13 05:40:57] 2025-10-13 03:39:51,910 | INFO     | 
[2025-10-13 05:40:57] 2025-10-13 03:39:51,910 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2025-10-13 05:40:57] 2025-10-13 03:39:52,515 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 05:40:57] 2025-10-13 03:39:52,515 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 05:40:57] 2025-10-13 03:39:52,515 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 05:40:57] 2025-10-13 03:39:52,515 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 05:40:57] 2025-10-13 03:39:52,515 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 05:40:57] 2025-10-13 03:39:52,515 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 05:40:57] 2025-10-13 03:39:52,515 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 05:40:57] 2025-10-13 03:39:52,516 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 05:40:57] 2025-10-13 03:39:52,516 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 05:40:57] 2025-10-13 03:39:52,516 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 05:40:57] 2025-10-13 03:39:52,516 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 05:40:57] 2025-10-13 03:39:52,516 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 05:40:57] 2025-10-13 03:39:52,516 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 05:40:57] 2025-10-13 03:39:52,516 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 05:40:57] 2025-10-13 03:39:52,516 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 05:40:57] 2025-10-13 03:39:52,516 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 05:40:57] 2025-10-13 03:39:52,516 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 05:40:57] 2025-10-13 03:39:52,516 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 05:40:57] 2025-10-13 03:39:52,517 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 05:40:57] 2025-10-13 03:39:52,517 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 05:40:57] 2025-10-13 03:39:52,517 | INFO     | job 6839867435 has completed (purged errors)
[2025-10-13 05:40:57] 2025-10-13 03:39:52,517 | INFO     | overall cleanup function is called
[2025-10-13 05:40:57] 2025-10-13 03:39:53,526 | INFO     | --- collectZombieJob: --- 10, [3355]
[2025-10-13 05:40:57] 2025-10-13 03:39:53,526 | INFO     | zombie collector waiting for pid 3355
[2025-10-13 05:40:57] 2025-10-13 03:39:53,527 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 05:40:57] 2025-10-13 03:39:53,527 | INFO     | collected zombie processes
[2025-10-13 05:40:57] 2025-10-13 03:39:53,527 | INFO     | will attempt to kill all subprocesses of pid=3355
[2025-10-13 05:40:57] 2025-10-13 03:39:53,651 | INFO     | process IDs to be killed: [3355] (in reverse order)
[2025-10-13 05:40:57] 2025-10-13 03:39:54,388 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 05:40:57] 2025-10-13 03:39:54,388 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 05:40:57] 2025-10-13 03:39:54,391 | INFO     | did not find any defunct processes belonging to 3355
[2025-10-13 05:40:57] 2025-10-13 03:39:54,395 | INFO     | did not find any defunct processes belonging to 3355
[2025-10-13 05:40:57] 2025-10-13 03:39:54,395 | INFO     | ready for new job
[2025-10-13 05:40:57] 2025-10-13 03:39:54,395 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 05:40:57] 2025-10-13 03:39:54,397 | INFO     | ***************************************
[2025-10-13 05:40:57] 2025-10-13 03:39:54,397 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 05:40:57] 2025-10-13 03:39:54,398 | INFO     | ***************************************
[2025-10-13 05:40:57] 2025-10-13 03:39:54,398 | INFO     | 
[2025-10-13 05:40:57] 2025-10-13 03:39:54,398 | INFO     | pilot is running in a VM
[2025-10-13 05:40:57] 2025-10-13 03:39:54,398 | INFO     | architecture information:
[2025-10-13 05:40:57] 2025-10-13 03:39:54,407 | INFO     | executing command: cat /etc/os-release
[2025-10-13 05:40:57] 2025-10-13 03:39:54,572 | INFO     | cat /etc/os-release:
[2025-10-13 05:40:57] NAME="CentOS Linux"
[2025-10-13 05:40:57] VERSION="7 (Core)"
[2025-10-13 05:40:57] ID="centos"
[2025-10-13 05:40:57] ID_LIKE="rhel fedora"
[2025-10-13 05:40:57] VERSION_ID="7"
[2025-10-13 05:40:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 05:40:57] ANSI_COLOR="0;31"
[2025-10-13 05:40:57] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 05:40:57] HOME_URL="https://www.centos.org/"
[2025-10-13 05:40:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 05:40:57] 
[2025-10-13 05:40:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 05:40:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 05:40:57] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 05:40:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 05:40:57] 
[2025-10-13 05:40:57] 2025-10-13 03:39:54,572 | INFO     | ***************************************
[2025-10-13 05:40:57] 2025-10-13 03:39:55,076 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2025-10-13 05:40:57] 2025-10-13 03:39:55,314 | INFO     | sufficient remaining disk space (494456012800 B)
[2025-10-13 05:40:57] 2025-10-13 03:39:55,314 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 05:40:57] 2025-10-13 03:39:55,315 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 05:40:57] 2025-10-13 03:39:55,315 | INFO     | update_server=False
[2025-10-13 05:40:57] 2025-10-13 03:39:55,315 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 05:40:57] 2025-10-13 03:39:55,316 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 05:40:57] 2025-10-13 03:39:55,372 | INFO     | all data control threads have been joined
[2025-10-13 05:40:57] 2025-10-13 03:39:55,891 | INFO     | all payload control threads have been joined
[2025-10-13 05:40:57] 2025-10-13 03:39:55,891 | INFO     | all job control threads have been joined
[2025-10-13 05:40:57] 2025-10-13 03:39:56,058 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 05:40:57] 2025-10-13 03:39:56,067 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 05:40:57] 2025-10-13 03:39:56,067 | INFO     | aborting loop
[2025-10-13 05:40:57] 2025-10-13 03:39:56,321 | INFO     | [job] retrieve thread has finished
[2025-10-13 05:40:57] 2025-10-13 03:39:56,378 | INFO     | [data] control thread has finished
[2025-10-13 05:40:57] 2025-10-13 03:39:56,647 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 05:40:57] 2025-10-13 03:39:56,664 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 05:40:57] 2025-10-13 03:39:56,694 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 05:40:57] 2025-10-13 03:39:56,744 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 05:40:57] 2025-10-13 03:39:56,757 | INFO     | [job] validate thread has finished
[2025-10-13 05:40:57] 2025-10-13 03:39:56,897 | INFO     | [job] control thread has finished
[2025-10-13 05:40:57] 2025-10-13 03:39:56,898 | INFO     | [payload] control thread has finished
[2025-10-13 05:40:57] 2025-10-13 03:39:56,947 | INFO     | [payload] validate_post thread has finished
[2025-10-13 05:40:57] 2025-10-13 03:39:57,074 | INFO     | [job] job monitor thread has finished
[2025-10-13 05:40:57] 2025-10-13 03:39:57,153 | INFO     | [data] copytool_in thread has finished
[2025-10-13 05:40:57] 2025-10-13 03:39:57,322 | INFO     | [data] copytool_out thread has finished
[2025-10-13 05:40:57] 2025-10-13 03:39:57,614 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 05:40:57] 2025-10-13 03:39:57,653 | INFO     | [job] queue monitor thread has finished
[2025-10-13 05:40:57] 2025-10-13 03:39:57,654 | INFO     | [payload] failed_post thread has finished
[2025-10-13 05:40:57] 2025-10-13 03:40:00,067 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 05:40:57] 2025-10-13 03:40:24,592 | INFO     | PID=29254 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-13 05:40:57] 2025-10-13 03:40:24,592 | INFO     | .. there are 9 such processes running
[2025-10-13 05:40:57] 2025-10-13 03:40:24,592 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 05:40:57] 2025-10-13 03:40:24,592 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 05:40:57] 2025-10-13 03:40:24,592 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 05:40:57] 2025-10-13 03:40:47,156 | INFO     | [monitor] cgroup control has ended
[2025-10-13 05:40:57] 2025-10-13 03:40:48,438 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139718972520256)>', '<ExcThread(monitor, started 139718020814592)>']
[2025-10-13 05:40:57] 2025-10-13 03:40:48,735 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 05:40:57] 2025-10-13 03:40:48,735 | INFO     | [monitor] control thread has ended
[2025-10-13 05:40:57] 2025-10-13 03:40:53,464 | INFO     | all workflow threads have been joined
[2025-10-13 05:40:57] 2025-10-13 03:40:53,464 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 05:40:57] 2025-10-13 03:40:53,465 | INFO     | traces error code: 0
[2025-10-13 05:40:57] 2025-10-13 03:40:53,465 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 05:40:57] 2025-10-13 03:40:53,827 [wrapper] ==== pilot stdout END ====
[2025-10-13 05:40:57] 2025-10-13 03:40:53,928 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 05:40:57] 2025-10-13 03:40:54,057 [wrapper] pilotpid: 29254
[2025-10-13 05:40:57] 2025-10-13 03:40:54,162 [wrapper] Pilot exit status: 0
[2025-10-13 05:40:57] 2025-10-13 03:40:54,643 [wrapper] pandaids: 6839867435
[2025-10-13 05:40:57] 2025-10-13 03:40:55,573 [wrapper] cleanup supervisor_pilot 30137 29255
[2025-10-13 05:40:57] 2025-10-13 03:40:55,650 [wrapper] Test setup, not cleaning
[2025-10-13 05:40:57] 2025-10-13 03:40:55,727 [wrapper] apfmon messages muted
[2025-10-13 05:40:57] 2025-10-13 03:40:55,814 [wrapper] ==== wrapper stdout END ====
[2025-10-13 05:40:57] 2025-10-13 03:40:55,891 [wrapper] ==== wrapper stderr END ====
[2025-10-13 05:40:57]  *** Error codes and diagnostics ***
[2025-10-13 05:40:57]     "exeErrorCode": 0,
[2025-10-13 05:40:57]     "exeErrorDiag": "",
[2025-10-13 05:40:57]     "pilotErrorCode": 0,
[2025-10-13 05:40:57]     "pilotErrorDiag": "",
[2025-10-13 05:40:57]  *** Listing of results directory ***
[2025-10-13 05:40:57] total 421116
[2025-10-13 05:40:57] -rw-r--r--. 1 boinc boinc    557409 Oct 12 12:38 pilot3.tar.gz
[2025-10-13 05:40:57] -rwx------. 1 boinc boinc     36292 Oct 12 12:52 runpilot2-wrapper.sh
[2025-10-13 05:40:57] -rw-r--r--. 1 boinc boinc      5112 Oct 12 12:52 queuedata.json
[2025-10-13 05:40:57] -rw-r--r--. 1 boinc boinc       100 Oct 13 01:14 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 05:40:57] -rwxr-xr-x. 1 boinc boinc      7986 Oct 13 01:14 run_atlas
[2025-10-13 05:40:57] -rw-r--r--. 1 boinc boinc       105 Oct 13 01:14 job.xml
[2025-10-13 05:40:57] -rw-r--r--. 1 boinc boinc      6383 Oct 13 01:14 init_data.xml
[2025-10-13 05:40:57] -rw-r--r--. 2 boinc boinc 221021662 Oct 13 01:14 EVNT.46676267._003631.pool.root.1
[2025-10-13 05:40:57] -rw-r--r--. 2 boinc boinc     15120 Oct 13 01:14 start_atlas.sh
[2025-10-13 05:40:57] drwxrwx--x. 2 boinc boinc        68 Oct 13 01:14 shared
[2025-10-13 05:40:57] -rw-r--r--. 2 boinc boinc    569679 Oct 13 01:14 input.tar.gz
[2025-10-13 05:40:57] -rw-r--r--. 1 boinc boinc         0 Oct 13 01:14 boinc_lockfile
[2025-10-13 05:40:57] -rw-r--r--. 1 boinc boinc      2550 Oct 13 01:14 pandaJob.out
[2025-10-13 05:40:57] -rw-------. 1 boinc boinc    975603 Oct 13 01:18 agis_schedconf.cvmfs.json
[2025-10-13 05:40:57] drwx------. 5 boinc boinc      4096 Oct 13 01:18 pilot3
[2025-10-13 05:40:57] -rw-------. 1 boinc boinc 201145972 Oct 13 05:36 HITS.46676269._076314.pool.root.1
[2025-10-13 05:40:57] -rw-r--r--. 1 boinc boinc       531 Oct 13 05:37 boinc_task_state.xml
[2025-10-13 05:40:57] -rw-------. 1 boinc boinc      1017 Oct 13 05:38 memory_monitor_summary.json
[2025-10-13 05:40:57] -rw-------. 1 boinc boinc   1560580 Oct 13 05:38 agis_ddmendpoints.agis.ALL.json
[2025-10-13 05:40:57] -rw-------. 1 boinc boinc    486637 Oct 13 05:38 log.46676269._076314.job.log.tgz.1
[2025-10-13 05:40:57] -rw-------. 1 boinc boinc        95 Oct 13 05:39 pilot_heartbeat.json
[2025-10-13 05:40:57] -rw-------. 1 boinc boinc      7781 Oct 13 05:39 heartbeat.json
[2025-10-13 05:40:57] -rw-r--r--. 1 boinc boinc        28 Oct 13 05:40 wrapper_checkpoint.txt
[2025-10-13 05:40:57] -rw-r--r--. 1 boinc boinc      8192 Oct 13 05:40 boinc_mmap_file
[2025-10-13 05:40:57] -rw-------. 1 boinc boinc      4884 Oct 13 05:40 pilotlog.txt
[2025-10-13 05:40:57] -rw-------. 1 boinc boinc   2097167 Oct 13 05:40 log.46676269._076314.job.log.1
[2025-10-13 05:40:57] -rw-------. 1 boinc boinc       357 Oct 13 05:40 output.list
[2025-10-13 05:40:57] -rw-r--r--. 1 boinc boinc       620 Oct 13 05:40 runtime_log
[2025-10-13 05:40:57] -rw-------. 1 boinc boinc   2600960 Oct 13 05:40 result.tar.gz
[2025-10-13 05:40:57] -rw-r--r--. 1 boinc boinc      8703 Oct 13 05:40 runtime_log.err
[2025-10-13 05:40:57] -rw-------. 1 boinc boinc       657 Oct 13 05:40 O56NDmvr8R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmNVjNDmLRb19n.diag
[2025-10-13 05:40:57] -rw-r--r--. 1 boinc boinc     20602 Oct 13 05:40 stderr.txt
[2025-10-13 05:40:58] HITS file was successfully produced:
[2025-10-13 05:40:58] -rw-------. 1 boinc boinc 201145972 Oct 13 05:36 shared/HITS.pool.root.1
[2025-10-13 05:40:58]  *** Contents of shared directory: ***
[2025-10-13 05:40:58] total 415392
[2025-10-13 05:40:58] -rw-r--r--. 2 boinc boinc 221021662 Oct 13 01:14 ATLAS.root_0
[2025-10-13 05:40:58] -rw-r--r--. 2 boinc boinc     15120 Oct 13 01:14 start_atlas.sh
[2025-10-13 05:40:58] -rw-r--r--. 2 boinc boinc    569679 Oct 13 01:14 input.tar.gz
[2025-10-13 05:40:58] -rw-------. 1 boinc boinc 201145972 Oct 13 05:36 HITS.pool.root.1
[2025-10-13 05:40:58] -rw-------. 1 boinc boinc   2600960 Oct 13 05:40 result.tar.gz
05:40:59 (25454): run_atlas exited; CPU time 57486.816480
05:40:59 (25454): called boinc_finish(0)

</stderr_txt>
]]>

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