Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
10:35:45 (20193): wrapper (7.7.26015): starting
10:35:45 (20193): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 10:35:45] Arguments: --nthreads 12
[2025-10-12 10:35:45] Threads: 12
[2025-10-12 10:35:45] Checking for CVMFS
[2025-10-12 10:35:45] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 10:35:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 10:35:45] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 10:35:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 10:35:45] 2.11.2.0 2998 38722 87536 151623 2 59 14859076 20275201 1 130560 0 24133595 99.990 1262868 44970 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 10:35:45] CVMFS is ok
[2025-10-12 10:35:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 10:35:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 10:35:45] Further information can be found at the LHC@home message board.
[2025-10-12 10:35:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 10:35:45] Checking for apptainer binary...
[2025-10-12 10:35:45] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 10:35:45] Running /usr/bin/apptainer --version
[2025-10-12 10:35:45] apptainer version 1.3.2-1.el7
[2025-10-12 10:35:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 10:35:47] c-205-12.aglt2.org
[2025-10-12 10:35:47] apptainer works
[2025-10-12 10:35:47] Set ATHENA_PROC_NUMBER=12
[2025-10-12 10:35:47] Set ATHENA_CORE_NUMBER=12
[2025-10-12 10:35:47] Starting ATLAS job with PandaID=6839867472
[2025-10-12 10:35:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 11:46:15]  *** The last 200 lines of the pilot log: ***
[2025-10-12 11:46:15]  status_code=0
[2025-10-12 11:46:15]  storage_token=
[2025-10-12 11:46:15]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6839867472/log.46676269._076351.job.log.tgz.1
[2025-10-12 11:46:15]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/14/e3/log.46676269._076351.job.log.tgz.1
[2025-10-12 11:46:15]  workdir=None
[2025-10-12 11:46:15] ]
[2025-10-12 11:46:15] 2025-10-12 15:45:07,809 | INFO     | transferring file log.46676269._076351.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6839867472/log.46676269._076351.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-12 11:46:15] 2025-10-12 15:45:07,809 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6839867472/log.46676269._076351.job.log.tgz.1 /tmp/boinchome/slots/0/log.46676269._076351.job
[2025-10-12 11:46:15] 2025-10-12 15:45:07,832 | INFO     | adding to output.list: log.46676269._076351.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/14/e3/log.46676269._076351.job.log.tg
[2025-10-12 11:46:15] 2025-10-12 15:45:07,833 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 11:46:15] 2025-10-12 15:45:07,833 | INFO     | summary of transferred files:
[2025-10-12 11:46:15] 2025-10-12 15:45:07,833 | INFO     |  -- lfn=log.46676269._076351.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 11:46:15] 2025-10-12 15:45:07,833 | INFO     | stage-out finished correctly
[2025-10-12 11:46:15] 2025-10-12 15:45:09,063 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 11:46:15] 2025-10-12 15:45:09,389 | INFO     | time since job start (4147s) is within the limit (172800.0s)
[2025-10-12 11:46:15] 2025-10-12 15:45:09,666 | WARNING  | process 30859 can no longer be monitored (due to stat problems) - aborting
[2025-10-12 11:46:15] 2025-10-12 15:45:09,667 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6839867472/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 11:46:15] 2025-10-12 15:45:09,754 | INFO     | number of running child processes to parent process 30859: 1
[2025-10-12 11:46:15] 2025-10-12 15:45:09,754 | INFO     | maximum number of monitored processes: 6
[2025-10-12 11:46:15] 2025-10-12 15:45:10,509 | INFO     | PID=23967 has CPU usage=6.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 11:46:15] 2025-10-12 15:45:11,510 | INFO     | time since job start (4149s) is within the limit (172800.0s)
[2025-10-12 11:46:15] 2025-10-12 15:45:12,038 | INFO     | job 6839867472 has state=finished
[2025-10-12 11:46:15] 2025-10-12 15:45:12,038 | INFO     | preparing for final server update for job 6839867472 in state='finished'
[2025-10-12 11:46:15] 2025-10-12 15:45:12,100 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-10-12 11:46:15] 2025-10-12 15:45:12,100 | INFO     | this job has now completed (state=finished)
[2025-10-12 11:46:15] 2025-10-12 15:45:12,100 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 11:46:15] 2025-10-12 15:45:12,100 | INFO     | log transfer has been attempted: DONE
[2025-10-12 11:46:15] 2025-10-12 15:45:12,100 | INFO     | job 6839867472 has finished - writing final server update
[2025-10-12 11:46:15] 2025-10-12 15:45:12,101 | INFO     | total number of processed events: 400 (read)
[2025-10-12 11:46:15] 2025-10-12 15:45:12,101 | INFO     | executing command: lscpu
[2025-10-12 11:46:15] 2025-10-12 15:45:12,127 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 11:46:15] 2025-10-12 15:45:12,257 | INFO     | monitor loop #310: job 0:6839867472 is in state 'finished'
[2025-10-12 11:46:15] 2025-10-12 15:45:12,258 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 11:46:15] 2025-10-12 15:45:13,515 | INFO     | time since job start (4151s) is within the limit (172800.0s)
[2025-10-12 11:46:15] 2025-10-12 15:45:14,761 | INFO     | monitor loop #311: job 0:6839867472 is in state 'finished'
[2025-10-12 11:46:15] 2025-10-12 15:45:14,761 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 11:46:15] 2025-10-12 15:45:15,521 | INFO     | time since job start (4153s) is within the limit (172800.0s)
[2025-10-12 11:46:15] 2025-10-12 15:45:16,845 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-12 11:46:15] 2025-10-12 15:45:16,849 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1695.8333333333333
[2025-10-12 11:46:15] 2025-10-12 15:45:16,851 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6839867472/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 11:46:15] 2025-10-12 15:45:16,852 | INFO     | extracted standard info from prmon json
[2025-10-12 11:46:15] 2025-10-12 15:45:16,852 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 11:46:15] 2025-10-12 15:45:16,852 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 11:46:15] 2025-10-12 15:45:16,852 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 11:46:15] 2025-10-12 15:45:16,852 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 11:46:15] 2025-10-12 15:45:16,854 | INFO     | fitting pss+swap vs Time
[2025-10-12 11:46:15] 2025-10-12 15:45:16,854 | INFO     | sum of square deviations: 70364110.0
[2025-10-12 11:46:15] 2025-10-12 15:45:16,854 | INFO     | sum of deviations: -7016505724.000001
[2025-10-12 11:46:15] 2025-10-12 15:45:16,854 | INFO     | mean x: 1760281926.0
[2025-10-12 11:46:15] 2025-10-12 15:45:16,854 | INFO     | mean y: 2851573.918032787
[2025-10-12 11:46:15] 2025-10-12 15:45:16,855 | INFO     | -- intersect: 175533078697.2732
[2025-10-12 11:46:15] 2025-10-12 15:45:16,855 | INFO     | intersect: 175533078697.2732
[2025-10-12 11:46:15] 2025-10-12 15:45:16,855 | INFO     | chi2: 0.04951495496784095
[2025-10-12 11:46:15] 2025-10-12 15:45:16,855 | INFO     | -- intersect: 175533078697.2732
[2025-10-12 11:46:15] 2025-10-12 15:45:16,855 | INFO     | current memory leak: -99.72 B/s (using 61 data points, chi2=0.05)
[2025-10-12 11:46:15] 2025-10-12 15:45:16,855 | INFO     | could have reported an average CPU frequency of 2048 MHz (6 samples)
[2025-10-12 11:46:15] 2025-10-12 15:45:16,856 | INFO     | ..............................
[2025-10-12 11:46:15] 2025-10-12 15:45:16,856 | INFO     | . Timing measurements:
[2025-10-12 11:46:15] 2025-10-12 15:45:16,856 | INFO     | . get job = 0 s
[2025-10-12 11:46:15] 2025-10-12 15:45:16,856 | INFO     | . initial setup = 2 s
[2025-10-12 11:46:15] 2025-10-12 15:45:16,856 | INFO     | . payload setup = 7 s
[2025-10-12 11:46:15] 2025-10-12 15:45:16,856 | INFO     | . stage-in = 0 s
[2025-10-12 11:46:15] 2025-10-12 15:45:16,856 | INFO     | . payload execution = 4118 s
[2025-10-12 11:46:15] 2025-10-12 15:45:16,856 | INFO     | . stage-out = 0 s
[2025-10-12 11:46:15] 2025-10-12 15:45:16,856 | INFO     | . log creation = 0 s
[2025-10-12 11:46:15] 2025-10-12 15:45:16,856 | INFO     | ..............................
[2025-10-12 11:46:15] 2025-10-12 15:45:16,940 | INFO     | 
[2025-10-12 11:46:15] 2025-10-12 15:45:16,940 | INFO     | job summary report
[2025-10-12 11:46:15] 2025-10-12 15:45:16,940 | INFO     | --------------------------------------------------
[2025-10-12 11:46:15] 2025-10-12 15:45:16,940 | INFO     | PanDA job id: 6839867472
[2025-10-12 11:46:15] 2025-10-12 15:45:16,940 | INFO     | task id: 46676269
[2025-10-12 11:46:15] 2025-10-12 15:45:16,941 | INFO     | errors: (none)
[2025-10-12 11:46:15] 2025-10-12 15:45:16,941 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 11:46:15] 2025-10-12 15:45:16,941 | INFO     | pilot state: finished 
[2025-10-12 11:46:15] 2025-10-12 15:45:16,941 | INFO     | transexitcode: 0
[2025-10-12 11:46:15] 2025-10-12 15:45:16,941 | INFO     | exeerrorcode: 0
[2025-10-12 11:46:15] 2025-10-12 15:45:16,941 | INFO     | exeerrordiag: 
[2025-10-12 11:46:15] 2025-10-12 15:45:16,941 | INFO     | exitcode: 0
[2025-10-12 11:46:15] 2025-10-12 15:45:16,942 | INFO     | exitmsg: OK
[2025-10-12 11:46:15] 2025-10-12 15:45:16,942 | INFO     | cpuconsumptiontime: 44822 s
[2025-10-12 11:46:15] 2025-10-12 15:45:16,942 | INFO     | nevents: 400
[2025-10-12 11:46:15] 2025-10-12 15:45:16,942 | INFO     | neventsw: 0
[2025-10-12 11:46:15] 2025-10-12 15:45:16,942 | INFO     | pid: 30859
[2025-10-12 11:46:15] 2025-10-12 15:45:16,942 | INFO     | pgrp: 30859
[2025-10-12 11:46:15] 2025-10-12 15:45:16,942 | INFO     | corecount: 12
[2025-10-12 11:46:15] 2025-10-12 15:45:16,943 | INFO     | event service: False
[2025-10-12 11:46:15] 2025-10-12 15:45:16,943 | INFO     | sizes: {0: 2348857, 5: 2349119, 11: 2349175, 4128: 2375044, 4129: 2384042, 4130: 2384098, 4138: 2384420}
[2025-10-12 11:46:15] 2025-10-12 15:45:16,943 | INFO     | --------------------------------------------------
[2025-10-12 11:46:15] 2025-10-12 15:45:16,943 | INFO     | 
[2025-10-12 11:46:15] 2025-10-12 15:45:16,943 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 11:46:15] 2025-10-12 15:45:16,969 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 11:46:15] 2025-10-12 15:45:16,970 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 11:46:15] 2025-10-12 15:45:16,970 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 11:46:15] 2025-10-12 15:45:16,970 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 11:46:15] 2025-10-12 15:45:16,970 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 11:46:15] 2025-10-12 15:45:16,970 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 11:46:15] 2025-10-12 15:45:16,970 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 11:46:15] 2025-10-12 15:45:16,971 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 11:46:15] 2025-10-12 15:45:16,971 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 11:46:15] 2025-10-12 15:45:16,971 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 11:46:15] 2025-10-12 15:45:16,971 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 11:46:15] 2025-10-12 15:45:16,971 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 11:46:15] 2025-10-12 15:45:16,971 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 11:46:15] 2025-10-12 15:45:16,971 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 11:46:15] 2025-10-12 15:45:16,971 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 11:46:15] 2025-10-12 15:45:16,972 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 11:46:15] 2025-10-12 15:45:16,972 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 11:46:15] 2025-10-12 15:45:16,972 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 11:46:15] 2025-10-12 15:45:16,972 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 11:46:15] 2025-10-12 15:45:16,972 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 11:46:15] 2025-10-12 15:45:16,972 | INFO     | job 6839867472 has completed (purged errors)
[2025-10-12 11:46:15] 2025-10-12 15:45:16,972 | INFO     | overall cleanup function is called
[2025-10-12 11:46:15] 2025-10-12 15:45:17,980 | INFO     | --- collectZombieJob: --- 10, [30859]
[2025-10-12 11:46:15] 2025-10-12 15:45:17,980 | INFO     | zombie collector waiting for pid 30859
[2025-10-12 11:46:15] 2025-10-12 15:45:17,980 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 11:46:15] 2025-10-12 15:45:17,980 | INFO     | collected zombie processes
[2025-10-12 11:46:15] 2025-10-12 15:45:17,981 | INFO     | will attempt to kill all subprocesses of pid=30859
[2025-10-12 11:46:15] 2025-10-12 15:45:18,073 | INFO     | process IDs to be killed: [30859] (in reverse order)
[2025-10-12 11:46:15] 2025-10-12 15:45:18,133 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 11:46:15] 2025-10-12 15:45:18,133 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 11:46:15] 2025-10-12 15:45:18,137 | INFO     | did not find any defunct processes belonging to 30859
[2025-10-12 11:46:15] 2025-10-12 15:45:18,141 | INFO     | did not find any defunct processes belonging to 30859
[2025-10-12 11:46:15] 2025-10-12 15:45:18,141 | INFO     | ready for new job
[2025-10-12 11:46:15] 2025-10-12 15:45:18,141 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 11:46:15] 2025-10-12 15:45:18,142 | INFO     | ***************************************
[2025-10-12 11:46:15] 2025-10-12 15:45:18,142 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 11:46:15] 2025-10-12 15:45:18,142 | INFO     | ***************************************
[2025-10-12 11:46:15] 2025-10-12 15:45:18,142 | INFO     | 
[2025-10-12 11:46:15] 2025-10-12 15:45:18,143 | INFO     | architecture information:
[2025-10-12 11:46:15] 2025-10-12 15:45:18,143 | INFO     | executing command: cat /etc/os-release
[2025-10-12 11:46:15] 2025-10-12 15:45:18,159 | INFO     | cat /etc/os-release:
[2025-10-12 11:46:15] NAME="CentOS Linux"
[2025-10-12 11:46:15] VERSION="7 (Core)"
[2025-10-12 11:46:15] ID="centos"
[2025-10-12 11:46:15] ID_LIKE="rhel fedora"
[2025-10-12 11:46:15] VERSION_ID="7"
[2025-10-12 11:46:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 11:46:15] ANSI_COLOR="0;31"
[2025-10-12 11:46:15] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 11:46:15] HOME_URL="https://www.centos.org/"
[2025-10-12 11:46:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 11:46:15] 
[2025-10-12 11:46:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 11:46:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 11:46:15] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 11:46:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 11:46:15] 
[2025-10-12 11:46:15] 2025-10-12 15:45:18,159 | INFO     | ***************************************
[2025-10-12 11:46:15] 2025-10-12 15:45:18,662 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 11:46:15] 2025-10-12 15:45:18,680 | INFO     | sufficient remaining disk space (29367468032 B)
[2025-10-12 11:46:15] 2025-10-12 15:45:18,680 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 11:46:15] 2025-10-12 15:45:18,680 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 11:46:15] 2025-10-12 15:45:18,680 | INFO     | update_server=False
[2025-10-12 11:46:15] 2025-10-12 15:45:18,681 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 11:46:15] 2025-10-12 15:45:18,681 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 11:46:15] 2025-10-12 15:45:18,681 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 11:46:15] 2025-10-12 15:45:18,682 | INFO     | aborting loop
[2025-10-12 11:46:15] 2025-10-12 15:45:18,682 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 11:46:15] 2025-10-12 15:45:19,057 | INFO     | all payload control threads have been joined
[2025-10-12 11:46:15] 2025-10-12 15:45:19,412 | INFO     | all data control threads have been joined
[2025-10-12 11:46:15] 2025-10-12 15:45:19,630 | INFO     | all job control threads have been joined
[2025-10-12 11:46:15] 2025-10-12 15:45:19,653 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 11:46:15] 2025-10-12 15:45:19,683 | INFO     | [job] retrieve thread has finished
[2025-10-12 11:46:15] 2025-10-12 15:45:19,687 | INFO     | [job] job monitor thread has finished
[2025-10-12 11:46:15] 2025-10-12 15:45:19,688 | INFO     | [job] queue monitor thread has finished
[2025-10-12 11:46:15] 2025-10-12 15:45:19,971 | INFO     | [data] copytool_in thread has finished
[2025-10-12 11:46:15] 2025-10-12 15:45:20,004 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 11:46:15] 2025-10-12 15:45:20,062 | INFO     | [payload] control thread has finished
[2025-10-12 11:46:15] 2025-10-12 15:45:20,375 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 11:46:15] 2025-10-12 15:45:20,418 | INFO     | [data] control thread has finished
[2025-10-12 11:46:15] 2025-10-12 15:45:20,635 | INFO     | [job] control thread has finished
[2025-10-12 11:46:15] 2025-10-12 15:45:20,666 | INFO     | [job] validate thread has finished
[2025-10-12 11:46:15] 2025-10-12 15:45:20,666 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 11:46:15] 2025-10-12 15:45:20,687 | INFO     | [data] copytool_out thread has finished
[2025-10-12 11:46:15] 2025-10-12 15:45:20,893 | INFO     | [payload] validate_post thread has finished
[2025-10-12 11:46:15] 2025-10-12 15:45:21,069 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 11:46:15] 2025-10-12 15:45:21,153 | INFO     | [payload] failed_post thread has finished
[2025-10-12 11:46:15] 2025-10-12 15:45:23,656 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 11:46:15] 2025-10-12 15:45:48,710 | INFO     | PID=23967 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 11:46:15] 2025-10-12 15:45:48,710 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 11:46:15] 2025-10-12 15:45:48,710 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 11:46:15] 2025-10-12 15:45:48,710 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 11:46:15] 2025-10-12 15:46:08,680 | INFO     | [monitor] cgroup control has ended
[2025-10-12 11:46:15] 2025-10-12 15:46:09,947 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140160496846656)>', '<ExcThread(monitor, started 140160041723648)>']
[2025-10-12 11:46:15] 2025-10-12 15:46:10,801 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 11:46:15] 2025-10-12 15:46:10,802 | INFO     | [monitor] control thread has ended
[2025-10-12 11:46:15] 2025-10-12 15:46:14,975 | INFO     | all workflow threads have been joined
[2025-10-12 11:46:15] 2025-10-12 15:46:14,975 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 11:46:15] 2025-10-12 15:46:14,976 | INFO     | traces error code: 0
[2025-10-12 11:46:15] 2025-10-12 15:46:14,976 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 11:46:15] 2025-10-12 15:46:15,074 [wrapper] ==== pilot stdout END ====
[2025-10-12 11:46:15] 2025-10-12 15:46:15,078 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 11:46:15] 2025-10-12 15:46:15,082 [wrapper] pilotpid: 23967
[2025-10-12 11:46:15] 2025-10-12 15:46:15,086 [wrapper] Pilot exit status: 0
[2025-10-12 11:46:15] 2025-10-12 15:46:15,100 [wrapper] pandaids: 6839867472
[2025-10-12 11:46:15] 2025-10-12 15:46:15,145 [wrapper] cleanup supervisor_pilot  1615 23968
[2025-10-12 11:46:15] 2025-10-12 15:46:15,148 [wrapper] Test setup, not cleaning
[2025-10-12 11:46:15] 2025-10-12 15:46:15,152 [wrapper] apfmon messages muted
[2025-10-12 11:46:15] 2025-10-12 15:46:15,156 [wrapper] ==== wrapper stdout END ====
[2025-10-12 11:46:15] 2025-10-12 15:46:15,160 [wrapper] ==== wrapper stderr END ====
[2025-10-12 11:46:15]  *** Error codes and diagnostics ***
[2025-10-12 11:46:15]     "exeErrorCode": 0,
[2025-10-12 11:46:15]     "exeErrorDiag": "",
[2025-10-12 11:46:15]     "pilotErrorCode": 0,
[2025-10-12 11:46:15]     "pilotErrorDiag": "",
[2025-10-12 11:46:15]  *** Listing of results directory ***
[2025-10-12 11:46:15] total 410436
[2025-10-12 11:46:15] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 06:38 pilot3.tar.gz
[2025-10-12 11:46:15] -rwx------ 1 boincer umatlas     36292 Oct 12 06:53 runpilot2-wrapper.sh
[2025-10-12 11:46:15] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 06:53 queuedata.json
[2025-10-12 11:46:15] -rw-r--r-- 1 boincer umatlas       100 Oct 12 10:35 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 11:46:15] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 10:35 run_atlas
[2025-10-12 11:46:15] -rw-r--r-- 1 boincer umatlas       105 Oct 12 10:35 job.xml
[2025-10-12 11:46:15] -rw-r--r-- 2 boincer umatlas 219497559 Oct 12 10:35 EVNT.46676267._003633.pool.root.1
[2025-10-12 11:46:15] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 10:35 start_atlas.sh
[2025-10-12 11:46:15] drwxrwx--x 2 boincer umatlas      4096 Oct 12 10:35 shared
[2025-10-12 11:46:15] -rw-r--r-- 2 boincer umatlas    569680 Oct 12 10:35 input.tar.gz
[2025-10-12 11:46:15] -rw-r--r-- 1 boincer umatlas         0 Oct 12 10:35 boinc_lockfile
[2025-10-12 11:46:15] -rw-r--r-- 1 boincer umatlas      2550 Oct 12 10:35 pandaJob.out
[2025-10-12 11:46:15] -rw------- 1 boincer umatlas    975528 Oct 12 10:35 agis_schedconf.cvmfs.json
[2025-10-12 11:46:15] -rw------- 1 boincer umatlas   1560580 Oct 12 10:36 agis_ddmendpoints.agis.ALL.json
[2025-10-12 11:46:15] drwx------ 5 boincer umatlas      4096 Oct 12 10:36 pilot3
[2025-10-12 11:46:15] -rw------- 1 boincer umatlas 194914138 Oct 12 11:44 HITS.46676269._076351.pool.root.1
[2025-10-12 11:46:15] -rw-r--r-- 1 boincer umatlas       530 Oct 12 11:44 boinc_task_state.xml
[2025-10-12 11:46:15] -rw------- 1 boincer umatlas        95 Oct 12 11:44 pilot_heartbeat.json
[2025-10-12 11:46:15] -rw------- 1 boincer umatlas      1049 Oct 12 11:45 memory_monitor_summary.json
[2025-10-12 11:46:15] -rw------- 1 boincer umatlas    378247 Oct 12 11:45 log.46676269._076351.job.log.tgz.1
[2025-10-12 11:46:15] -rw------- 1 boincer umatlas      7855 Oct 12 11:45 heartbeat.json
[2025-10-12 11:46:15] -rw-r--r-- 1 boincer umatlas      5953 Oct 12 11:45 init_data.xml
[2025-10-12 11:46:15] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 11:45 boinc_mmap_file
[2025-10-12 11:46:15] -rw-r--r-- 1 boincer umatlas        27 Oct 12 11:45 wrapper_checkpoint.txt
[2025-10-12 11:46:15] -rw------- 1 boincer umatlas      4746 Oct 12 11:46 pilotlog.txt
[2025-10-12 11:46:15] -rw------- 1 boincer umatlas    608046 Oct 12 11:46 log.46676269._076351.job.log.1
[2025-10-12 11:46:15] -rw------- 1 boincer umatlas       357 Oct 12 11:46 output.list
[2025-10-12 11:46:15] -rw-r--r-- 1 boincer umatlas       620 Oct 12 11:46 runtime_log
[2025-10-12 11:46:15] -rw------- 1 boincer umatlas   1003520 Oct 12 11:46 result.tar.gz
[2025-10-12 11:46:15] -rw-r--r-- 1 boincer umatlas      8705 Oct 12 11:46 runtime_log.err
[2025-10-12 11:46:15] -rw------- 1 boincer umatlas       659 Oct 12 11:46 0MZNDm3s8R8n9Rq4apOajLDm4fhM0noT9bVof3QYDmqfTMDmhhytCn.diag
[2025-10-12 11:46:15] -rw-r--r-- 1 boincer umatlas     22210 Oct 12 11:46 stderr.txt
[2025-10-12 11:46:15] HITS file was successfully produced:
[2025-10-12 11:46:15] -rw------- 1 boincer umatlas 194914138 Oct 12 11:44 shared/HITS.pool.root.1
[2025-10-12 11:46:15]  *** Contents of shared directory: ***
[2025-10-12 11:46:15] total 406264
[2025-10-12 11:46:15] -rw-r--r-- 2 boincer umatlas 219497559 Oct 12 10:35 ATLAS.root_0
[2025-10-12 11:46:15] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 10:35 start_atlas.sh
[2025-10-12 11:46:15] -rw-r--r-- 2 boincer umatlas    569680 Oct 12 10:35 input.tar.gz
[2025-10-12 11:46:15] -rw------- 1 boincer umatlas 194914138 Oct 12 11:44 HITS.pool.root.1
[2025-10-12 11:46:15] -rw------- 1 boincer umatlas   1003520 Oct 12 11:46 result.tar.gz
11:46:17 (20193): run_atlas exited; CPU time 44821.061497
11:46:17 (20193): called boinc_finish(0)

</stderr_txt>
]]>

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