Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:00:53 (2305): wrapper (7.7.26015): starting
11:00:53 (2305): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 11:00:53] Arguments: --nthreads 8
[2025-10-13 11:00:53] Threads: 8
[2025-10-13 11:00:53] Checking for CVMFS
[2025-10-13 11:00:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 11:00:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 11:00:55] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 11:00:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 11:00:56] 2.11.2.0 8404 221807 143976 151654 2 195 14908289 25165825 4632 130560 0 123313270 99.891 67652158 4135 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-10-13 11:00:56] CVMFS is ok
[2025-10-13 11:00:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 11:00:56] Checking for apptainer binary...
[2025-10-13 11:00:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 11:00:56] Running /usr/bin/apptainer --version
[2025-10-13 11:00:56] apptainer version 1.3.2-1.el7
[2025-10-13 11:00:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 11:01:07] cg-vwn309.simple-grid.lan
[2025-10-13 11:01:07] apptainer works
[2025-10-13 11:01:07] Set ATHENA_PROC_NUMBER=8
[2025-10-13 11:01:07] Set ATHENA_CORE_NUMBER=8
[2025-10-13 11:01:07] Starting ATLAS job with PandaID=6838850594
[2025-10-13 11:01:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/12 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 15:21:08]  *** The last 200 lines of the pilot log: ***
[2025-10-13 15:21:08] 2025-10-13 13:20:15,859 | INFO     | mean x: 1760354096.5
[2025-10-13 15:21:08] 2025-10-13 13:20:15,859 | INFO     | mean y: 2473347.9631147543
[2025-10-13 15:21:08] 2025-10-13 13:20:15,859 | INFO     | -- intersect: -3372843936.7470865
[2025-10-13 15:21:08] 2025-10-13 13:20:15,859 | INFO     | intersect: -3372843936.7470865
[2025-10-13 15:21:08] 2025-10-13 13:20:15,860 | INFO     | chi2: 3.146254623069618
[2025-10-13 15:21:08] 2025-10-13 13:20:15,860 | INFO     | sum of square deviations: 4233158440.0
[2025-10-13 15:21:08] 2025-10-13 13:20:15,862 | INFO     | sum of deviations: 41169543854.99999
[2025-10-13 15:21:08] 2025-10-13 13:20:15,862 | INFO     | mean x: 1760353944.0
[2025-10-13 15:21:08] 2025-10-13 13:20:15,862 | INFO     | mean y: 2491407.1004184103
[2025-10-13 15:21:08] 2025-10-13 13:20:15,862 | INFO     | -- intersect: -17117814842.960518
[2025-10-13 15:21:08] 2025-10-13 13:20:15,863 | INFO     | intersect: -17117814842.960518
[2025-10-13 15:21:08] 2025-10-13 13:20:15,863 | INFO     | chi2: 1.51765118526869
[2025-10-13 15:21:08] 2025-10-13 13:20:15,863 | INFO     | current chi2=1.51765118526869 (change=51.76324337704092 %)
[2025-10-13 15:21:08] 2025-10-13 13:20:15,864 | INFO     | sum of square deviations: 3972995422.5
[2025-10-13 15:21:08] 2025-10-13 13:20:15,866 | INFO     | sum of deviations: 40238735583.00001
[2025-10-13 15:21:08] 2025-10-13 13:20:15,866 | INFO     | mean x: 1760353791.5
[2025-10-13 15:21:08] 2025-10-13 13:20:15,866 | INFO     | mean y: 2490861.4102564105
[2025-10-13 15:21:08] 2025-10-13 13:20:15,866 | INFO     | -- intersect: -17826477767.032715
[2025-10-13 15:21:08] 2025-10-13 13:20:15,866 | INFO     | intersect: -17826477767.032715
[2025-10-13 15:21:08] 2025-10-13 13:20:15,866 | INFO     | chi2: 1.5181165477390166
[2025-10-13 15:21:08] 2025-10-13 13:20:15,867 | INFO     | current chi2=1.5181165477390166 (change=-0.030663335214553326 %)
[2025-10-13 15:21:08] 2025-10-13 13:20:15,867 | INFO     | right removable region: 233
[2025-10-13 15:21:08] 2025-10-13 13:20:15,867 | INFO     | sum of square deviations: 4233158440.0
[2025-10-13 15:21:08] 2025-10-13 13:20:15,869 | INFO     | sum of deviations: -29176363684.000008
[2025-10-13 15:21:08] 2025-10-13 13:20:15,869 | INFO     | mean x: 1760354249.0
[2025-10-13 15:21:08] 2025-10-13 13:20:15,869 | INFO     | mean y: 2494425.5481171547
[2025-10-13 15:21:08] 2025-10-13 13:20:15,870 | INFO     | -- intersect: 12135452950.36504
[2025-10-13 15:21:08] 2025-10-13 13:20:15,870 | INFO     | intersect: 12135452950.36504
[2025-10-13 15:21:08] 2025-10-13 13:20:15,870 | INFO     | chi2: 1.7408049135887484
[2025-10-13 15:21:08] 2025-10-13 13:20:15,870 | INFO     | current chi2=1.7408049135887484 (change=44.67056477805518 %)
[2025-10-13 15:21:08] 2025-10-13 13:20:15,871 | INFO     | sum of square deviations: 3972995422.5
[2025-10-13 15:21:08] 2025-10-13 13:20:15,872 | INFO     | sum of deviations: -38601459867.50001
[2025-10-13 15:21:08] 2025-10-13 13:20:15,873 | INFO     | mean x: 1760354401.5
[2025-10-13 15:21:08] 2025-10-13 13:20:15,873 | INFO     | mean y: 2499935.3547008545
[2025-10-13 15:21:08] 2025-10-13 13:20:15,873 | INFO     | -- intersect: 17106030786.976074
[2025-10-13 15:21:08] 2025-10-13 13:20:15,873 | INFO     | intersect: 17106030786.976074
[2025-10-13 15:21:08] 2025-10-13 13:20:15,873 | INFO     | chi2: 1.6728242274454281
[2025-10-13 15:21:08] 2025-10-13 13:20:15,874 | INFO     | current chi2=1.6728242274454281 (change=3.9051294957098346 %)
[2025-10-13 15:21:08] 2025-10-13 13:20:15,874 | INFO     | left removable region: 20
[2025-10-13 15:21:08] 2025-10-13 13:20:15,874 | INFO     | sum of square deviations: 2996454322.0
[2025-10-13 15:21:08] 2025-10-13 13:20:15,876 | INFO     | sum of deviations: -6882491713.0
[2025-10-13 15:21:08] 2025-10-13 13:20:15,876 | INFO     | mean x: 1760354371.0
[2025-10-13 15:21:08] 2025-10-13 13:20:15,876 | INFO     | mean y: 2519784.79342723
[2025-10-13 15:21:08] 2025-10-13 13:20:15,876 | INFO     | -- intersect: 4045840012.1026783
[2025-10-13 15:21:08] 2025-10-13 13:20:15,876 | INFO     | intersect: 4045840012.1026783
[2025-10-13 15:21:08] 2025-10-13 13:20:15,877 | INFO     | chi2: 0.008319481572996975
[2025-10-13 15:21:08] 2025-10-13 13:20:15,877 | INFO     | -- intersect: 4045840012.1026783
[2025-10-13 15:21:08] 2025-10-13 13:20:15,877 | INFO     | current memory leak: -2.30 B/s (using 213 data points, chi2=0.01)
[2025-10-13 15:21:08] 2025-10-13 13:20:15,878 | INFO     | could have reported an average CPU frequency of 1999 MHz (11 samples)
[2025-10-13 15:21:08] 2025-10-13 13:20:15,878 | INFO     | ..............................
[2025-10-13 15:21:08] 2025-10-13 13:20:15,878 | INFO     | . Timing measurements:
[2025-10-13 15:21:08] 2025-10-13 13:20:15,878 | INFO     | . get job = 0 s
[2025-10-13 15:21:08] 2025-10-13 13:20:15,878 | INFO     | . initial setup = 8 s
[2025-10-13 15:21:08] 2025-10-13 13:20:15,878 | INFO     | . payload setup = 138 s
[2025-10-13 15:21:08] 2025-10-13 13:20:15,878 | INFO     | . stage-in = 0 s
[2025-10-13 15:21:08] 2025-10-13 13:20:15,879 | INFO     | . payload execution = 14917 s
[2025-10-13 15:21:08] 2025-10-13 13:20:15,879 | INFO     | . stage-out = 3 s
[2025-10-13 15:21:08] 2025-10-13 13:20:15,879 | INFO     | . log creation = 1 s
[2025-10-13 15:21:08] 2025-10-13 13:20:15,879 | INFO     | ..............................
[2025-10-13 15:21:08] 2025-10-13 13:20:15,947 | INFO     | time since job start (15343s) is within the limit (172800.0s)
[2025-10-13 15:21:08] 2025-10-13 13:20:16,429 | INFO     | 
[2025-10-13 15:21:08] 2025-10-13 13:20:16,430 | INFO     | job summary report
[2025-10-13 15:21:08] 2025-10-13 13:20:16,430 | INFO     | --------------------------------------------------
[2025-10-13 15:21:08] 2025-10-13 13:20:16,430 | INFO     | PanDA job id: 6838850594
[2025-10-13 15:21:08] 2025-10-13 13:20:16,430 | INFO     | task id: 46676269
[2025-10-13 15:21:08] 2025-10-13 13:20:16,430 | INFO     | errors: (none)
[2025-10-13 15:21:08] 2025-10-13 13:20:16,430 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 15:21:08] 2025-10-13 13:20:16,430 | INFO     | pilot state: finished 
[2025-10-13 15:21:08] 2025-10-13 13:20:16,430 | INFO     | transexitcode: 0
[2025-10-13 15:21:08] 2025-10-13 13:20:16,430 | INFO     | exeerrorcode: 0
[2025-10-13 15:21:08] 2025-10-13 13:20:16,430 | INFO     | exeerrordiag: 
[2025-10-13 15:21:08] 2025-10-13 13:20:16,431 | INFO     | exitcode: 0
[2025-10-13 15:21:08] 2025-10-13 13:20:16,431 | INFO     | exitmsg: OK
[2025-10-13 15:21:08] 2025-10-13 13:20:16,431 | INFO     | cpuconsumptiontime: 56927 s
[2025-10-13 15:21:08] 2025-10-13 13:20:16,431 | INFO     | nevents: 400
[2025-10-13 15:21:08] 2025-10-13 13:20:16,431 | INFO     | neventsw: 0
[2025-10-13 15:21:08] 2025-10-13 13:20:16,431 | INFO     | pid: 12722
[2025-10-13 15:21:08] 2025-10-13 13:20:16,431 | INFO     | pgrp: 12722
[2025-10-13 15:21:08] 2025-10-13 13:20:16,431 | INFO     | corecount: 8
[2025-10-13 15:21:08] 2025-10-13 13:20:16,431 | INFO     | event service: False
[2025-10-13 15:21:08] 2025-10-13 13:20:16,431 | INFO     | sizes: {0: 2348631, 1: 2348886, 2: 2348886, 12: 2348914, 23: 2348942, 34: 2348970, 44: 2349126, 55: 2349154, 66: 2349182, 77: 2349210, 87: 2349266, 92: 2349836, 98
[2025-10-13 15:21:08] 2025-10-13 13:20:16,431 | INFO     | --------------------------------------------------
[2025-10-13 15:21:08] 2025-10-13 13:20:16,431 | INFO     | 
[2025-10-13 15:21:08] 2025-10-13 13:20:16,432 | INFO     | executing command: ls -lF /var/lib/boinc/slots/12
[2025-10-13 15:21:08] 2025-10-13 13:20:16,930 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 15:21:08] 2025-10-13 13:20:16,930 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 15:21:08] 2025-10-13 13:20:16,930 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 15:21:08] 2025-10-13 13:20:16,930 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 15:21:08] 2025-10-13 13:20:16,930 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 15:21:08] 2025-10-13 13:20:16,930 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 15:21:08] 2025-10-13 13:20:16,931 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 15:21:08] 2025-10-13 13:20:16,931 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 15:21:08] 2025-10-13 13:20:16,931 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 15:21:08] 2025-10-13 13:20:16,931 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 15:21:08] 2025-10-13 13:20:16,931 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 15:21:08] 2025-10-13 13:20:16,931 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 15:21:08] 2025-10-13 13:20:16,931 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 15:21:08] 2025-10-13 13:20:16,931 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 15:21:08] 2025-10-13 13:20:16,931 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 15:21:08] 2025-10-13 13:20:16,931 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 15:21:08] 2025-10-13 13:20:16,932 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 15:21:08] 2025-10-13 13:20:16,932 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 15:21:08] 2025-10-13 13:20:16,932 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 15:21:08] 2025-10-13 13:20:16,932 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 15:21:08] 2025-10-13 13:20:16,932 | INFO     | job 6838850594 has completed (purged errors)
[2025-10-13 15:21:08] 2025-10-13 13:20:16,932 | INFO     | overall cleanup function is called
[2025-10-13 15:21:08] 2025-10-13 13:20:17,113 | INFO     | PID=6098 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-13 15:21:08] 2025-10-13 13:20:17,113 | INFO     | .. there are 9 such processes running
[2025-10-13 15:21:08] 2025-10-13 13:20:17,941 | INFO     | --- collectZombieJob: --- 10, [12722]
[2025-10-13 15:21:08] 2025-10-13 13:20:17,942 | INFO     | zombie collector waiting for pid 12722
[2025-10-13 15:21:08] 2025-10-13 13:20:17,942 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 15:21:08] 2025-10-13 13:20:17,942 | INFO     | collected zombie processes
[2025-10-13 15:21:08] 2025-10-13 13:20:17,942 | INFO     | will attempt to kill all subprocesses of pid=12722
[2025-10-13 15:21:08] 2025-10-13 13:20:18,093 | INFO     | process IDs to be killed: [12722] (in reverse order)
[2025-10-13 15:21:08] 2025-10-13 13:20:18,955 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 15:21:08] 2025-10-13 13:20:18,955 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 15:21:08] 2025-10-13 13:20:18,959 | INFO     | did not find any defunct processes belonging to 12722
[2025-10-13 15:21:08] 2025-10-13 13:20:18,962 | INFO     | did not find any defunct processes belonging to 12722
[2025-10-13 15:21:08] 2025-10-13 13:20:18,963 | INFO     | ready for new job
[2025-10-13 15:21:08] 2025-10-13 13:20:18,963 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 15:21:08] 2025-10-13 13:20:18,965 | INFO     | ***************************************
[2025-10-13 15:21:08] 2025-10-13 13:20:18,965 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 15:21:08] 2025-10-13 13:20:18,965 | INFO     | ***************************************
[2025-10-13 15:21:08] 2025-10-13 13:20:18,966 | INFO     | 
[2025-10-13 15:21:08] 2025-10-13 13:20:18,969 | INFO     | pilot is running in a VM
[2025-10-13 15:21:08] 2025-10-13 13:20:18,970 | INFO     | architecture information:
[2025-10-13 15:21:08] 2025-10-13 13:20:18,982 | INFO     | executing command: cat /etc/os-release
[2025-10-13 15:21:08] 2025-10-13 13:20:19,217 | INFO     | cat /etc/os-release:
[2025-10-13 15:21:08] NAME="CentOS Linux"
[2025-10-13 15:21:08] VERSION="7 (Core)"
[2025-10-13 15:21:08] ID="centos"
[2025-10-13 15:21:08] ID_LIKE="rhel fedora"
[2025-10-13 15:21:08] VERSION_ID="7"
[2025-10-13 15:21:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 15:21:08] ANSI_COLOR="0;31"
[2025-10-13 15:21:08] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 15:21:08] HOME_URL="https://www.centos.org/"
[2025-10-13 15:21:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 15:21:08] 
[2025-10-13 15:21:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 15:21:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 15:21:08] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 15:21:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 15:21:08] 
[2025-10-13 15:21:08] 2025-10-13 13:20:19,217 | INFO     | ***************************************
[2025-10-13 15:21:08] 2025-10-13 13:20:19,721 | INFO     | executing command: df -mP /var/lib/boinc/slots/12
[2025-10-13 15:21:08] 2025-10-13 13:20:19,945 | INFO     | sufficient remaining disk space (495305359360 B)
[2025-10-13 15:21:08] 2025-10-13 13:20:19,945 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 15:21:08] 2025-10-13 13:20:19,946 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 15:21:08] 2025-10-13 13:20:19,946 | INFO     | update_server=False
[2025-10-13 15:21:08] 2025-10-13 13:20:19,946 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 15:21:08] 2025-10-13 13:20:19,950 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 15:21:08] 2025-10-13 13:20:20,078 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-13 15:21:08] 2025-10-13 13:20:20,079 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-13 15:21:08] 2025-10-13 13:20:20,079 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 15:21:08] 2025-10-13 13:20:20,079 | INFO     | will abort loop
[2025-10-13 15:21:08] 2025-10-13 13:20:20,099 | INFO     | all job control threads have been joined
[2025-10-13 15:21:08] 2025-10-13 13:20:20,276 | INFO     | all data control threads have been joined
[2025-10-13 15:21:08] 2025-10-13 13:20:20,608 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 15:21:08] 2025-10-13 13:20:20,954 | INFO     | [job] retrieve thread has finished
[2025-10-13 15:21:08] 2025-10-13 13:20:20,961 | INFO     | all payload control threads have been joined
[2025-10-13 15:21:08] 2025-10-13 13:20:21,038 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 15:21:08] 2025-10-13 13:20:21,085 | INFO     | [job] job monitor thread has finished
[2025-10-13 15:21:08] 2025-10-13 13:20:21,086 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 15:21:08] 2025-10-13 13:20:21,105 | INFO     | [job] control thread has finished
[2025-10-13 15:21:08] 2025-10-13 13:20:21,226 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 15:21:08] 2025-10-13 13:20:21,235 | INFO     | [data] copytool_in thread has finished
[2025-10-13 15:21:08] 2025-10-13 13:20:21,282 | INFO     | [data] control thread has finished
[2025-10-13 15:21:08] 2025-10-13 13:20:21,595 | INFO     | [job] validate thread has finished
[2025-10-13 15:21:08] 2025-10-13 13:20:21,917 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 15:21:08] 2025-10-13 13:20:21,933 | INFO     | [payload] validate_post thread has finished
[2025-10-13 15:21:08] 2025-10-13 13:20:21,957 | INFO     | [data] copytool_out thread has finished
[2025-10-13 15:21:08] 2025-10-13 13:20:21,968 | INFO     | [payload] control thread has finished
[2025-10-13 15:21:08] 2025-10-13 13:20:22,091 | INFO     | [job] queue monitor thread has finished
[2025-10-13 15:21:08] 2025-10-13 13:20:22,424 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 15:21:08] 2025-10-13 13:20:22,453 | INFO     | [payload] failed_post thread has finished
[2025-10-13 15:21:08] 2025-10-13 13:20:24,617 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 15:21:08] 2025-10-13 13:20:49,254 | INFO     | PID=6098 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-13 15:21:08] 2025-10-13 13:20:49,255 | INFO     | .. there are 9 such processes running
[2025-10-13 15:21:08] 2025-10-13 13:20:49,256 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 15:21:08] 2025-10-13 13:20:49,256 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 15:21:08] 2025-10-13 13:20:49,256 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 15:21:08] 2025-10-13 13:20:57,840 | INFO     | [monitor] cgroup control has ended
[2025-10-13 15:21:08] 2025-10-13 13:20:59,668 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140157257803584)>', '<ExcThread(monitor, started 140156526917376)>']
[2025-10-13 15:21:08] 2025-10-13 13:21:00,321 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 15:21:08] 2025-10-13 13:21:00,322 | INFO     | [monitor] control thread has ended
[2025-10-13 15:21:08] 2025-10-13 13:21:04,694 | INFO     | all workflow threads have been joined
[2025-10-13 15:21:08] 2025-10-13 13:21:04,695 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 15:21:08] 2025-10-13 13:21:04,695 | INFO     | traces error code: 0
[2025-10-13 15:21:08] 2025-10-13 13:21:04,695 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 15:21:08] 2025-10-13 13:21:05,063 [wrapper] ==== pilot stdout END ====
[2025-10-13 15:21:08] 2025-10-13 13:21:05,149 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 15:21:08] 2025-10-13 13:21:05,185 [wrapper] pilotpid: 6098
[2025-10-13 15:21:08] 2025-10-13 13:21:05,229 [wrapper] Pilot exit status: 0
[2025-10-13 15:21:08] 2025-10-13 13:21:05,683 [wrapper] pandaids: 6838850594
[2025-10-13 15:21:08] 2025-10-13 13:21:06,065 [wrapper] cleanup supervisor_pilot 23445 6099
[2025-10-13 15:21:08] 2025-10-13 13:21:06,184 [wrapper] Test setup, not cleaning
[2025-10-13 15:21:08] 2025-10-13 13:21:06,242 [wrapper] apfmon messages muted
[2025-10-13 15:21:08] 2025-10-13 13:21:06,366 [wrapper] ==== wrapper stdout END ====
[2025-10-13 15:21:08] 2025-10-13 13:21:06,457 [wrapper] ==== wrapper stderr END ====
[2025-10-13 15:21:08]  *** Error codes and diagnostics ***
[2025-10-13 15:21:08]     "exeErrorCode": 0,
[2025-10-13 15:21:08]     "exeErrorDiag": "",
[2025-10-13 15:21:08]     "pilotErrorCode": 0,
[2025-10-13 15:21:08]     "pilotErrorDiag": "",
[2025-10-13 15:21:08]  *** Listing of results directory ***
[2025-10-13 15:21:08] total 417088
[2025-10-13 15:21:08] -rw-r--r--. 1 boinc boinc    557409 Oct 11 20:56 pilot3.tar.gz
[2025-10-13 15:21:08] -rwx------. 1 boinc boinc     36292 Oct 11 21:02 runpilot2-wrapper.sh
[2025-10-13 15:21:08] -rw-r--r--. 1 boinc boinc      5112 Oct 11 21:02 queuedata.json
[2025-10-13 15:21:08] -rw-r--r--. 1 boinc boinc       100 Oct 13 11:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 15:21:08] -rwxr-xr-x. 1 boinc boinc      7986 Oct 13 11:00 run_atlas
[2025-10-13 15:21:08] -rw-r--r--. 1 boinc boinc       105 Oct 13 11:00 job.xml
[2025-10-13 15:21:08] -rw-r--r--. 1 boinc boinc      6388 Oct 13 11:00 init_data.xml
[2025-10-13 15:21:08] -rw-r--r--. 2 boinc boinc 222311187 Oct 13 11:00 EVNT.46676267._002542.pool.root.1
[2025-10-13 15:21:08] -rw-r--r--. 2 boinc boinc     15120 Oct 13 11:00 start_atlas.sh
[2025-10-13 15:21:08] drwxrwx--x. 2 boinc boinc        68 Oct 13 11:00 shared
[2025-10-13 15:21:08] -rw-r--r--. 2 boinc boinc    569676 Oct 13 11:00 input.tar.gz
[2025-10-13 15:21:08] -rw-r--r--. 1 boinc boinc         0 Oct 13 11:00 boinc_lockfile
[2025-10-13 15:21:08] -rw-r--r--. 1 boinc boinc      2550 Oct 13 11:01 pandaJob.out
[2025-10-13 15:21:08] -rw-------. 1 boinc boinc    972857 Oct 13 11:04 agis_schedconf.cvmfs.json
[2025-10-13 15:21:08] drwx------. 5 boinc boinc      4096 Oct 13 11:04 pilot3
[2025-10-13 15:21:08] -rw-------. 1 boinc boinc 195835452 Oct 13 15:17 HITS.46676269._063270.pool.root.1
[2025-10-13 15:21:08] -rw-r--r--. 1 boinc boinc       531 Oct 13 15:17 boinc_task_state.xml
[2025-10-13 15:21:08] -rw-------. 1 boinc boinc      1019 Oct 13 15:18 memory_monitor_summary.json
[2025-10-13 15:21:08] -rw-------. 1 boinc boinc   1560580 Oct 13 15:18 agis_ddmendpoints.agis.ALL.json
[2025-10-13 15:21:08] -rw-------. 1 boinc boinc    472387 Oct 13 15:18 log.46676269._063270.job.log.tgz.1
[2025-10-13 15:21:08] -rw-------. 1 boinc boinc      7782 Oct 13 15:20 heartbeat.json
[2025-10-13 15:21:08] -rw-------. 1 boinc boinc        95 Oct 13 15:20 pilot_heartbeat.json
[2025-10-13 15:21:08] -rw-r--r--. 1 boinc boinc        28 Oct 13 15:20 wrapper_checkpoint.txt
[2025-10-13 15:21:08] -rw-r--r--. 1 boinc boinc      8192 Oct 13 15:20 boinc_mmap_file
[2025-10-13 15:21:08] -rw-------. 1 boinc boinc      5070 Oct 13 15:21 pilotlog.txt
[2025-10-13 15:21:08] -rw-------. 1 boinc boinc   2057392 Oct 13 15:21 log.46676269._063270.job.log.1
[2025-10-13 15:21:08] -rw-------. 1 boinc boinc       357 Oct 13 15:21 output.list
[2025-10-13 15:21:08] -rw-r--r--. 1 boinc boinc       620 Oct 13 15:21 runtime_log
[2025-10-13 15:21:08] -rw-------. 1 boinc boinc   2549760 Oct 13 15:21 result.tar.gz
[2025-10-13 15:21:08] -rw-------. 1 boinc boinc       657 Oct 13 15:21 XewKDm31tR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmMMhNDmO6xFXo.diag
[2025-10-13 15:21:08] -rw-r--r--. 1 boinc boinc      8717 Oct 13 15:21 runtime_log.err
[2025-10-13 15:21:08] -rw-r--r--. 1 boinc boinc     20814 Oct 13 15:21 stderr.txt
[2025-10-13 15:21:08] HITS file was successfully produced:
[2025-10-13 15:21:08] -rw-------. 1 boinc boinc 195835452 Oct 13 15:17 shared/HITS.pool.root.1
[2025-10-13 15:21:08]  *** Contents of shared directory: ***
[2025-10-13 15:21:08] total 411420
[2025-10-13 15:21:08] -rw-r--r--. 2 boinc boinc 222311187 Oct 13 11:00 ATLAS.root_0
[2025-10-13 15:21:08] -rw-r--r--. 2 boinc boinc     15120 Oct 13 11:00 start_atlas.sh
[2025-10-13 15:21:08] -rw-r--r--. 2 boinc boinc    569676 Oct 13 11:00 input.tar.gz
[2025-10-13 15:21:08] -rw-------. 1 boinc boinc 195835452 Oct 13 15:17 HITS.pool.root.1
[2025-10-13 15:21:08] -rw-------. 1 boinc boinc   2549760 Oct 13 15:21 result.tar.gz
15:21:09 (2305): run_atlas exited; CPU time 57132.900898
15:21:09 (2305): called boinc_finish(0)

</stderr_txt>
]]>

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