Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
20:18:24 (2254436): wrapper (7.7.26015): starting
20:18:24 (2254436): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 20:18:24] Arguments: --nthreads 12
[2025-10-12 20:18:24] Threads: 12
[2025-10-12 20:18:24] Checking for CVMFS
[2025-10-12 20:18:25] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 20:18:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 20:18:25] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 20:18:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 20:18:25] 2.13.2.0 4637 1950 50676 151631 1 57 3029982 4096000 917 130560 0 6319108 99.997 72285 469 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-12 20:18:25] CVMFS is ok
[2025-10-12 20:18:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 20:18:25] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-12 20:18:25] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-12 20:18:25] Further information can be found at the LHC@home message board.
[2025-10-12 20:18:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 20:18:25] Checking for apptainer binary...
[2025-10-12 20:18:25] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 20:18:25] Running /usr/bin/apptainer --version
[2025-10-12 20:18:25] apptainer version 1.4.3
[2025-10-12 20:18:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 20:18:25] JM4
[2025-10-12 20:18:25] apptainer works
[2025-10-12 20:18:25] Set ATHENA_PROC_NUMBER=12
[2025-10-12 20:18:25] Set ATHENA_CORE_NUMBER=12
[2025-10-12 20:18:25] Starting ATLAS job with PandaID=6839867660
[2025-10-12 20:18:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 20:55:50]  *** The last 200 lines of the pilot log: ***
[2025-10-12 20:55:50]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-12 20:55:50]  replicas=None
[2025-10-12 20:55:50]  scope=mc23_13p6TeV
[2025-10-12 20:55:50]  status=None
[2025-10-12 20:55:50]  status_code=0
[2025-10-12 20:55:50]  storage_token=
[2025-10-12 20:55:50]  surl=/var/lib/boinc-client/slots/0/PanDA_Pilot-6839867660/log.46676269._076539.job.log.tgz.1
[2025-10-12 20:55:50]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/5a/65/log.46676269._076539.job.log.tgz.1
[2025-10-12 20:55:50]  workdir=None
[2025-10-12 20:55:50] ]
[2025-10-12 20:55:50] 2025-10-12 18:55:25,849 | INFO     | transferring file log.46676269._076539.job.log.tgz.1 from /var/lib/boinc-client/slots/0/PanDA_Pilot-6839867660/log.46676269._076539.job.log.tgz.1 to /var/lib/boinc
[2025-10-12 20:55:50] 2025-10-12 18:55:25,849 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/0/PanDA_Pilot-6839867660/log.46676269._076539.job.log.tgz.1 /var/lib/boinc-client/slots/0/log.466762
[2025-10-12 20:55:50] 2025-10-12 18:55:25,863 | INFO     | adding to output.list: log.46676269._076539.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/5a/65/log.46676269._076539.job.log.tg
[2025-10-12 20:55:50] 2025-10-12 18:55:25,863 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 20:55:50] 2025-10-12 18:55:25,863 | INFO     | summary of transferred files:
[2025-10-12 20:55:50] 2025-10-12 18:55:25,863 | INFO     |  -- lfn=log.46676269._076539.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 20:55:50] 2025-10-12 18:55:25,863 | INFO     | stage-out finished correctly
[2025-10-12 20:55:50] 2025-10-12 18:55:25,925 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 20:55:50] 2025-10-12 18:55:25,988 | INFO     | job 6839867660 has state=finished
[2025-10-12 20:55:50] 2025-10-12 18:55:25,988 | INFO     | preparing for final server update for job 6839867660 in state='finished'
[2025-10-12 20:55:50] 2025-10-12 18:55:25,988 | INFO     | this job has now completed (state=finished)
[2025-10-12 20:55:50] 2025-10-12 18:55:25,989 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 20:55:50] 2025-10-12 18:55:25,989 | INFO     | log transfer has been attempted: DONE
[2025-10-12 20:55:50] 2025-10-12 18:55:25,989 | INFO     | job 6839867660 has finished - writing final server update
[2025-10-12 20:55:50] 2025-10-12 18:55:25,989 | INFO     | total number of processed events: 400 (read)
[2025-10-12 20:55:50] 2025-10-12 18:55:25,989 | INFO     | executing command: lscpu
[2025-10-12 20:55:50] 2025-10-12 18:55:26,010 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 20:55:50] 2025-10-12 18:55:26,148 | WARNING  | process 2264819 can no longer be monitored (due to stat problems) - aborting
[2025-10-12 20:55:50] 2025-10-12 18:55:26,148 | INFO     | using path: /var/lib/boinc-client/slots/0/PanDA_Pilot-6839867660/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 20:55:50] 2025-10-12 18:55:26,235 | INFO     | number of running child processes to parent process 2264819: 1
[2025-10-12 20:55:50] 2025-10-12 18:55:26,235 | INFO     | maximum number of monitored processes: 6
[2025-10-12 20:55:50] 2025-10-12 18:55:27,050 | INFO     | time since job start (2215s) is within the limit (172800.0s)
[2025-10-12 20:55:50] 2025-10-12 18:55:28,737 | INFO     | monitor loop #170: job 0:6839867660 is in state 'finished'
[2025-10-12 20:55:50] 2025-10-12 18:55:28,737 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 20:55:50] 2025-10-12 18:55:29,055 | INFO     | time since job start (2217s) is within the limit (172800.0s)
[2025-10-12 20:55:50] 2025-10-12 18:55:30,865 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-12 20:55:50] 2025-10-12 18:55:30,868 | INFO     | found 12 cores (12 cores per socket, 1 socket) HT, CPU MHz: 4022.084125
[2025-10-12 20:55:50] 2025-10-12 18:55:30,871 | INFO     | using path: /var/lib/boinc-client/slots/0/PanDA_Pilot-6839867660/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 20:55:50] 2025-10-12 18:55:30,871 | INFO     | extracted standard info from prmon json
[2025-10-12 20:55:50] 2025-10-12 18:55:30,871 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 20:55:50] 2025-10-12 18:55:30,871 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 20:55:50] 2025-10-12 18:55:30,871 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 20:55:50] 2025-10-12 18:55:30,871 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 20:55:50] 2025-10-12 18:55:30,872 | INFO     | fitting pss+swap vs Time
[2025-10-12 20:55:50] 2025-10-12 18:55:30,872 | INFO     | sum of square deviations: 7553630.0
[2025-10-12 20:55:50] 2025-10-12 18:55:30,872 | INFO     | sum of deviations: -1628388168.0
[2025-10-12 20:55:50] 2025-10-12 18:55:30,872 | INFO     | mean x: 1760294292.0
[2025-10-12 20:55:50] 2025-10-12 18:55:30,872 | INFO     | mean y: 2851909.275862069
[2025-10-12 20:55:50] 2025-10-12 18:55:30,873 | INFO     | -- intersect: 379481645190.2199
[2025-10-12 20:55:50] 2025-10-12 18:55:30,873 | INFO     | intersect: 379481645190.2199
[2025-10-12 20:55:50] 2025-10-12 18:55:30,873 | INFO     | chi2: 0.01421204887337077
[2025-10-12 20:55:50] 2025-10-12 18:55:30,873 | INFO     | -- intersect: 379481645190.2199
[2025-10-12 20:55:50] 2025-10-12 18:55:30,873 | INFO     | current memory leak: -215.58 B/s (using 29 data points, chi2=0.01)
[2025-10-12 20:55:50] 2025-10-12 18:55:30,873 | INFO     | could have reported an average CPU frequency of 3936 MHz (5 samples)
[2025-10-12 20:55:50] 2025-10-12 18:55:30,873 | INFO     | ..............................
[2025-10-12 20:55:50] 2025-10-12 18:55:30,873 | INFO     | . Timing measurements:
[2025-10-12 20:55:50] 2025-10-12 18:55:30,873 | INFO     | . get job = 0 s
[2025-10-12 20:55:50] 2025-10-12 18:55:30,873 | INFO     | . initial setup = 1 s
[2025-10-12 20:55:50] 2025-10-12 18:55:30,873 | INFO     | . payload setup = 3 s
[2025-10-12 20:55:50] 2025-10-12 18:55:30,873 | INFO     | . stage-in = 0 s
[2025-10-12 20:55:50] 2025-10-12 18:55:30,873 | INFO     | . payload execution = 2192 s
[2025-10-12 20:55:50] 2025-10-12 18:55:30,873 | INFO     | . stage-out = 0 s
[2025-10-12 20:55:50] 2025-10-12 18:55:30,874 | INFO     | . log creation = 0 s
[2025-10-12 20:55:50] 2025-10-12 18:55:30,874 | INFO     | ..............................
[2025-10-12 20:55:50] 2025-10-12 18:55:31,061 | INFO     | time since job start (2219s) is within the limit (172800.0s)
[2025-10-12 20:55:50] 2025-10-12 18:55:31,322 | INFO     | 
[2025-10-12 20:55:50] 2025-10-12 18:55:31,322 | INFO     | job summary report
[2025-10-12 20:55:50] 2025-10-12 18:55:31,322 | INFO     | --------------------------------------------------
[2025-10-12 20:55:50] 2025-10-12 18:55:31,322 | INFO     | PanDA job id: 6839867660
[2025-10-12 20:55:50] 2025-10-12 18:55:31,322 | INFO     | task id: 46676269
[2025-10-12 20:55:50] 2025-10-12 18:55:31,322 | INFO     | errors: (none)
[2025-10-12 20:55:50] 2025-10-12 18:55:31,323 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 20:55:50] 2025-10-12 18:55:31,323 | INFO     | pilot state: finished 
[2025-10-12 20:55:50] 2025-10-12 18:55:31,323 | INFO     | transexitcode: 0
[2025-10-12 20:55:50] 2025-10-12 18:55:31,323 | INFO     | exeerrorcode: 0
[2025-10-12 20:55:50] 2025-10-12 18:55:31,323 | INFO     | exeerrordiag: 
[2025-10-12 20:55:50] 2025-10-12 18:55:31,323 | INFO     | exitcode: 0
[2025-10-12 20:55:50] 2025-10-12 18:55:31,323 | INFO     | exitmsg: OK
[2025-10-12 20:55:50] 2025-10-12 18:55:31,323 | INFO     | cpuconsumptiontime: 23558 s
[2025-10-12 20:55:50] 2025-10-12 18:55:31,323 | INFO     | nevents: 400
[2025-10-12 20:55:50] 2025-10-12 18:55:31,323 | INFO     | neventsw: 0
[2025-10-12 20:55:50] 2025-10-12 18:55:31,323 | INFO     | pid: 2264819
[2025-10-12 20:55:50] 2025-10-12 18:55:31,323 | INFO     | pgrp: 2264819
[2025-10-12 20:55:50] 2025-10-12 18:55:31,323 | INFO     | corecount: 12
[2025-10-12 20:55:50] 2025-10-12 18:55:31,323 | INFO     | event service: False
[2025-10-12 20:55:50] 2025-10-12 18:55:31,323 | INFO     | sizes: {0: 2348864, 1: 2348864, 3: 2349154, 11: 2349182, 2199: 2374288, 2200: 2383484, 2205: 2383654}
[2025-10-12 20:55:50] 2025-10-12 18:55:31,324 | INFO     | --------------------------------------------------
[2025-10-12 20:55:50] 2025-10-12 18:55:31,324 | INFO     | 
[2025-10-12 20:55:50] 2025-10-12 18:55:31,324 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2025-10-12 20:55:50] 2025-10-12 18:55:31,338 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 20:55:50] 2025-10-12 18:55:31,338 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 20:55:50] 2025-10-12 18:55:31,338 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 20:55:50] 2025-10-12 18:55:31,338 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 20:55:50] 2025-10-12 18:55:31,338 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 20:55:50] 2025-10-12 18:55:31,338 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 20:55:50] 2025-10-12 18:55:31,338 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 20:55:50] 2025-10-12 18:55:31,339 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 20:55:50] 2025-10-12 18:55:31,339 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 20:55:50] 2025-10-12 18:55:31,339 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 20:55:50] 2025-10-12 18:55:31,339 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 20:55:50] 2025-10-12 18:55:31,339 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 20:55:50] 2025-10-12 18:55:31,339 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 20:55:50] 2025-10-12 18:55:31,339 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 20:55:50] 2025-10-12 18:55:31,339 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 20:55:50] 2025-10-12 18:55:31,339 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 20:55:50] 2025-10-12 18:55:31,339 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 20:55:50] 2025-10-12 18:55:31,339 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 20:55:50] 2025-10-12 18:55:31,339 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 20:55:50] 2025-10-12 18:55:31,339 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 20:55:50] 2025-10-12 18:55:31,339 | INFO     | job 6839867660 has completed (purged errors)
[2025-10-12 20:55:50] 2025-10-12 18:55:31,340 | INFO     | overall cleanup function is called
[2025-10-12 20:55:50] 2025-10-12 18:55:32,347 | INFO     | --- collectZombieJob: --- 10, [2264819]
[2025-10-12 20:55:50] 2025-10-12 18:55:32,347 | INFO     | zombie collector waiting for pid 2264819
[2025-10-12 20:55:50] 2025-10-12 18:55:32,347 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 20:55:50] 2025-10-12 18:55:32,347 | INFO     | collected zombie processes
[2025-10-12 20:55:50] 2025-10-12 18:55:32,347 | INFO     | will attempt to kill all subprocesses of pid=2264819
[2025-10-12 20:55:50] 2025-10-12 18:55:32,438 | INFO     | process IDs to be killed: [2264819] (in reverse order)
[2025-10-12 20:55:50] 2025-10-12 18:55:32,479 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 20:55:50] 2025-10-12 18:55:32,479 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 20:55:50] 2025-10-12 18:55:32,482 | INFO     | did not find any defunct processes belonging to 2264819
[2025-10-12 20:55:50] 2025-10-12 18:55:32,484 | INFO     | did not find any defunct processes belonging to 2264819
[2025-10-12 20:55:50] 2025-10-12 18:55:32,485 | INFO     | ready for new job
[2025-10-12 20:55:50] 2025-10-12 18:55:32,485 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 20:55:50] 2025-10-12 18:55:32,486 | INFO     | ***************************************
[2025-10-12 20:55:50] 2025-10-12 18:55:32,486 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 20:55:50] 2025-10-12 18:55:32,486 | INFO     | ***************************************
[2025-10-12 20:55:50] 2025-10-12 18:55:32,486 | INFO     | 
[2025-10-12 20:55:50] 2025-10-12 18:55:32,487 | INFO     | architecture information:
[2025-10-12 20:55:50] 2025-10-12 18:55:32,487 | INFO     | executing command: cat /etc/os-release
[2025-10-12 20:55:50] 2025-10-12 18:55:32,496 | INFO     | cat /etc/os-release:
[2025-10-12 20:55:50] NAME="CentOS Linux"
[2025-10-12 20:55:50] VERSION="7 (Core)"
[2025-10-12 20:55:50] ID="centos"
[2025-10-12 20:55:50] ID_LIKE="rhel fedora"
[2025-10-12 20:55:50] VERSION_ID="7"
[2025-10-12 20:55:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 20:55:50] ANSI_COLOR="0;31"
[2025-10-12 20:55:50] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 20:55:50] HOME_URL="https://www.centos.org/"
[2025-10-12 20:55:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 20:55:50] 
[2025-10-12 20:55:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 20:55:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 20:55:50] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 20:55:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 20:55:50] 
[2025-10-12 20:55:50] 2025-10-12 18:55:32,496 | INFO     | ***************************************
[2025-10-12 20:55:50] 2025-10-12 18:55:32,999 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2025-10-12 20:55:50] 2025-10-12 18:55:33,010 | INFO     | sufficient remaining disk space (72241643520 B)
[2025-10-12 20:55:50] 2025-10-12 18:55:33,011 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 20:55:50] 2025-10-12 18:55:33,011 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 20:55:50] 2025-10-12 18:55:33,011 | INFO     | update_server=False
[2025-10-12 20:55:50] 2025-10-12 18:55:33,011 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 20:55:50] 2025-10-12 18:55:33,011 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-10-12 20:55:50] 2025-10-12 18:55:33,011 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 20:55:50] 2025-10-12 18:55:33,011 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 20:55:50] 2025-10-12 18:55:33,012 | INFO     | aborting loop
[2025-10-12 20:55:50] 2025-10-12 18:55:33,012 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 20:55:50] 2025-10-12 18:55:33,012 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 20:55:50] 2025-10-12 18:55:33,778 | INFO     | all data control threads have been joined
[2025-10-12 20:55:50] 2025-10-12 18:55:33,892 | INFO     | all job control threads have been joined
[2025-10-12 20:55:50] 2025-10-12 18:55:33,938 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 20:55:50] 2025-10-12 18:55:34,016 | INFO     | [job] retrieve thread has finished
[2025-10-12 20:55:50] 2025-10-12 18:55:34,017 | INFO     | [job] job monitor thread has finished
[2025-10-12 20:55:50] 2025-10-12 18:55:34,020 | INFO     | [payload] validate_post thread has finished
[2025-10-12 20:55:50] 2025-10-12 18:55:34,113 | INFO     | all payload control threads have been joined
[2025-10-12 20:55:50] 2025-10-12 18:55:34,138 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 20:55:50] 2025-10-12 18:55:34,211 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 20:55:50] 2025-10-12 18:55:34,759 | INFO     | [payload] failed_post thread has finished
[2025-10-12 20:55:50] 2025-10-12 18:55:34,782 | INFO     | [data] control thread has finished
[2025-10-12 20:55:50] 2025-10-12 18:55:34,897 | INFO     | [job] control thread has finished
[2025-10-12 20:55:50] 2025-10-12 18:55:34,958 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 20:55:50] 2025-10-12 18:55:35,119 | INFO     | [payload] control thread has finished
[2025-10-12 20:55:50] 2025-10-12 18:55:35,237 | INFO     | [data] copytool_in thread has finished
[2025-10-12 20:55:50] 2025-10-12 18:55:35,348 | INFO     | [monitor] cgroup control has ended
[2025-10-12 20:55:50] 2025-10-12 18:55:35,403 | INFO     | [job] validate thread has finished
[2025-10-12 20:55:50] 2025-10-12 18:55:35,943 | INFO     | [data] copytool_out thread has finished
[2025-10-12 20:55:50] 2025-10-12 18:55:35,944 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 20:55:50] 2025-10-12 18:55:36,496 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 20:55:50] 2025-10-12 18:55:36,945 | INFO     | [job] queue monitor thread has finished
[2025-10-12 20:55:50] 2025-10-12 18:55:40,502 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 20:55:50] 2025-10-12 18:55:43,453 | INFO     | job.realtimelogging is not enabled
[2025-10-12 20:55:50] 2025-10-12 18:55:44,458 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 20:55:50] 2025-10-12 18:55:45,656 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 127684132620096)>', '<ExcThread(monitor, started 127683103012608)>']
[2025-10-12 20:55:50] 2025-10-12 18:55:46,069 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 20:55:50] 2025-10-12 18:55:46,070 | INFO     | [monitor] control thread has ended
[2025-10-12 20:55:50] 2025-10-12 18:55:50,680 | INFO     | all workflow threads have been joined
[2025-10-12 20:55:50] 2025-10-12 18:55:50,680 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 20:55:50] 2025-10-12 18:55:50,680 | INFO     | traces error code: 0
[2025-10-12 20:55:50] 2025-10-12 18:55:50,681 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 20:55:50] 2025-10-12 18:55:50,742 [wrapper] ==== pilot stdout END ====
[2025-10-12 20:55:50] 2025-10-12 18:55:50,744 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 20:55:50] 2025-10-12 18:55:50,746 [wrapper] pilotpid: 2258249
[2025-10-12 20:55:50] 2025-10-12 18:55:50,748 [wrapper] Pilot exit status: 0
[2025-10-12 20:55:50] 2025-10-12 18:55:50,755 [wrapper] pandaids: 6839867660
[2025-10-12 20:55:50] 2025-10-12 18:55:50,781 [wrapper] cleanup supervisor_pilot 2291341 2258250
[2025-10-12 20:55:50] 2025-10-12 18:55:50,783 [wrapper] Test setup, not cleaning
[2025-10-12 20:55:50] 2025-10-12 18:55:50,785 [wrapper] apfmon messages muted
[2025-10-12 20:55:50] 2025-10-12 18:55:50,787 [wrapper] ==== wrapper stdout END ====
[2025-10-12 20:55:50] 2025-10-12 18:55:50,789 [wrapper] ==== wrapper stderr END ====
[2025-10-12 20:55:50]  *** Error codes and diagnostics ***
[2025-10-12 20:55:50]     "exeErrorCode": 0,
[2025-10-12 20:55:50]     "exeErrorDiag": "",
[2025-10-12 20:55:50]     "pilotErrorCode": 0,
[2025-10-12 20:55:50]     "pilotErrorDiag": "",
[2025-10-12 20:55:50]  *** Listing of results directory ***
[2025-10-12 20:55:50] total 415704
[2025-10-12 20:55:50] -rw-r--r-- 1 boinc boinc    557409 oct 12 12:57 pilot3.tar.gz
[2025-10-12 20:55:50] -rwx------ 1 boinc boinc     36292 oct 12 12:59 runpilot2-wrapper.sh
[2025-10-12 20:55:50] -rw-r--r-- 1 boinc boinc      5112 oct 12 12:59 queuedata.json
[2025-10-12 20:55:50] -rw-r--r-- 1 boinc boinc       100 oct 12 20:18 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 20:55:50] -rwxr-xr-x 1 boinc boinc      7986 oct 12 20:18 run_atlas
[2025-10-12 20:55:50] -rw-r--r-- 1 boinc boinc       105 oct 12 20:18 job.xml
[2025-10-12 20:55:50] -rw-r--r-- 2 boinc boinc 223670041 oct 12 20:18 EVNT.46676267._003646.pool.root.1
[2025-10-12 20:55:50] -rw-r--r-- 2 boinc boinc     15120 oct 12 20:18 start_atlas.sh
[2025-10-12 20:55:50] drwxrwx--x 1 boinc boinc        76 oct 12 20:18 shared
[2025-10-12 20:55:50] -rw-r--r-- 2 boinc boinc    569677 oct 12 20:18 input.tar.gz
[2025-10-12 20:55:50] -rw-r--r-- 1 boinc boinc         0 oct 12 20:18 boinc_setup_complete
[2025-10-12 20:55:50] -rw-r--r-- 1 boinc boinc         0 oct 12 20:18 boinc_lockfile
[2025-10-12 20:55:50] -rw-r--r-- 1 boinc boinc      2550 oct 12 20:18 pandaJob.out
[2025-10-12 20:55:50] -rw------- 1 boinc boinc    975528 oct 12 20:18 agis_schedconf.cvmfs.json
[2025-10-12 20:55:50] -rw------- 1 boinc boinc   1560580 oct 12 20:18 agis_ddmendpoints.agis.ALL.json
[2025-10-12 20:55:50] drwx------ 1 boinc boinc       414 oct 12 20:18 pilot3
[2025-10-12 20:55:50] -rw-r--r-- 1 boinc boinc      9260 oct 12 20:34 init_data.xml
[2025-10-12 20:55:50] -rw------- 1 boinc boinc        95 oct 12 20:54 pilot_heartbeat.json
[2025-10-12 20:55:50] -rw------- 1 boinc boinc 196663290 oct 12 20:55 HITS.46676269._076539.pool.root.1
[2025-10-12 20:55:50] -rw-r--r-- 1 boinc boinc       529 oct 12 20:55 boinc_task_state.xml
[2025-10-12 20:55:50] -rw------- 1 boinc boinc      1016 oct 12 20:55 memory_monitor_summary.json
[2025-10-12 20:55:50] -rw------- 1 boinc boinc    366414 oct 12 20:55 log.46676269._076539.job.log.tgz.1
[2025-10-12 20:55:50] -rw------- 1 boinc boinc      7728 oct 12 20:55 heartbeat.json
[2025-10-12 20:55:50] -rw-r--r-- 1 boinc boinc      8192 oct 12 20:55 boinc_mmap_file
[2025-10-12 20:55:50] -rw-r--r-- 1 boinc boinc        27 oct 12 20:55 wrapper_checkpoint.txt
[2025-10-12 20:55:50] -rw------- 1 boinc boinc      4631 oct 12 20:55 pilotlog.txt
[2025-10-12 20:55:50] -rw------- 1 boinc boinc    361194 oct 12 20:55 log.46676269._076539.job.log.1
[2025-10-12 20:55:50] -rw------- 1 boinc boinc       357 oct 12 20:55 output.list
[2025-10-12 20:55:50] -rw-r--r-- 1 boinc boinc       620 oct 12 20:55 runtime_log
[2025-10-12 20:55:50] -rw------- 1 boinc boinc    747520 oct 12 20:55 result.tar.gz
[2025-10-12 20:55:50] -rw------- 1 boinc boinc       637 oct 12 20:55 WZbLDmmy8R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm8WjNDm5Usxsm.diag
[2025-10-12 20:55:50] -rw-r--r-- 1 boinc boinc      8731 oct 12 20:55 runtime_log.err
[2025-10-12 20:55:50] -rw-r--r-- 1 boinc boinc     21871 oct 12 20:55 stderr.txt
[2025-10-12 20:55:50] HITS file was successfully produced:
[2025-10-12 20:55:50] -rw------- 1 boinc boinc 196663290 oct 12 20:55 shared/HITS.pool.root.1
[2025-10-12 20:55:50]  *** Contents of shared directory: ***
[2025-10-12 20:55:50] total 411792
[2025-10-12 20:55:50] -rw-r--r-- 2 boinc boinc 223670041 oct 12 20:18 ATLAS.root_0
[2025-10-12 20:55:50] -rw-r--r-- 2 boinc boinc     15120 oct 12 20:18 start_atlas.sh
[2025-10-12 20:55:50] -rw-r--r-- 2 boinc boinc    569677 oct 12 20:18 input.tar.gz
[2025-10-12 20:55:50] -rw------- 1 boinc boinc 196663290 oct 12 20:55 HITS.pool.root.1
[2025-10-12 20:55:50] -rw------- 1 boinc boinc    747520 oct 12 20:55 result.tar.gz
20:55:52 (2254436): run_atlas exited; CPU time 23561.827754
20:55:52 (2254436): called boinc_finish(0)

</stderr_txt>
]]>

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