Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:33:03 (2084045): wrapper (7.7.26015): starting
07:33:03 (2084045): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 07:33:03] Arguments: --nthreads 8
[2025-10-12 07:33:03] Threads: 8
[2025-10-12 07:33:03] Checking for CVMFS
[2025-10-12 07:33:03] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 07:33:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 07:33:04] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 07:33:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 07:33:04] 2.11.3.0 2170 31569 201132 151623 1 458 40017450 45568000 15109 130560 0 201147149 99.867 77738009 23172 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.163:3129 1
[2025-10-12 07:33:04] CVMFS is ok
[2025-10-12 07:33:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 07:33:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 07:33:04] Further information can be found at the LHC@home message board.
[2025-10-12 07:33:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 07:33:04] Checking for apptainer binary...
[2025-10-12 07:33:04] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 07:33:04] Running /usr/bin/apptainer --version
[2025-10-12 07:33:04] apptainer version 1.4.1-1.el9
[2025-10-12 07:33:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 07:33:05] wns0004.triumf.lcg
[2025-10-12 07:33:05] apptainer works
[2025-10-12 07:33:05] Set ATHENA_PROC_NUMBER=8
[2025-10-12 07:33:05] Set ATHENA_CORE_NUMBER=8
[2025-10-12 07:33:05] Starting ATLAS job with PandaID=6839989817
[2025-10-12 07:33:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 07:40:03]  *** The last 200 lines of the pilot log: ***
[2025-10-12 07:40:03] 2025-10-12 14:39:28,965 | WARNING  | wrong length of table data, x=[1760279751.0, 1760279812.0], y=[1680.0, 574262.0] (must be same and length>=4)
[2025-10-12 07:40:03] 2025-10-12 14:39:28,965 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-10-12 07:40:03] 2025-10-12 14:39:28,965 | INFO     | ..............................
[2025-10-12 07:40:03] 2025-10-12 14:39:28,965 | INFO     | . Timing measurements:
[2025-10-12 07:40:03] 2025-10-12 14:39:28,965 | INFO     | . get job = 0 s
[2025-10-12 07:40:03] 2025-10-12 14:39:28,965 | INFO     | . initial setup = 6 s
[2025-10-12 07:40:03] 2025-10-12 14:39:28,965 | INFO     | . payload setup = 40 s
[2025-10-12 07:40:03] 2025-10-12 14:39:28,965 | INFO     | . stage-in = 0 s
[2025-10-12 07:40:03] 2025-10-12 14:39:28,965 | INFO     | . payload execution = 96 s
[2025-10-12 07:40:03] 2025-10-12 14:39:28,966 | INFO     | . stage-out = 0 s
[2025-10-12 07:40:03] 2025-10-12 14:39:28,966 | INFO     | . log creation = 0 s
[2025-10-12 07:40:03] 2025-10-12 14:39:28,966 | INFO     | ..............................
[2025-10-12 07:40:03] 2025-10-12 14:39:28,966 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-12 07:40:03] 2025-10-12 14:39:28,966 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6839989817/pilotlog.txt
[2025-10-12 07:40:03] 2025-10-12 14:39:28,986 | INFO     | monitor loop #91: job 0:6839989817 is in state 'failed'
[2025-10-12 07:40:03] 2025-10-12 14:39:28,987 | INFO     | will abort job monitoring soon since job state=failed (job is still in queue)
[2025-10-12 07:40:03] 2025-10-12 14:39:29,055 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-10-12 07:40:03] - Log from pilotlog.txt -
[2025-10-12 07:40:03] 2025-10-12 14:39:28,958 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 07:40:03] 2025-10-12 14:39:28,958 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 07:40:03] 2025-10-12 14:39:28,964 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 07:40:03] 2025-10-12 14:39:28,964 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 07:40:03] 2025-10-12 14:39:28,965 | WARNING  | wrong length of table data, x=[1760279751.0, 1760279812.0], y=[1680.0, 574262.0] (must be same and length>=4)
[2025-10-12 07:40:03] 2025-10-12 14:39:28,965 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-10-12 07:40:03] 2025-10-12 14:39:28,965 | INFO     | ..............................
[2025-10-12 07:40:03] 2025-10-12 14:39:28,965 | INFO     | . Timing measurements:
[2025-10-12 07:40:03] 2025-10-12 14:39:28,965 | INFO     | . get job = 0 s
[2025-10-12 07:40:03] 2025-10-12 14:39:28,965 | INFO     | . initial setup = 6 s
[2025-10-12 07:40:03] 2025-10-12 14:39:28,965 | INFO     | . payload setup = 40 s
[2025-10-12 07:40:03] 2025-10-12 14:39:28,965 | INFO     | . stage-in = 0 s
[2025-10-12 07:40:03] 2025-10-12 14:39:28,965 | INFO     | . payload execution = 96 s
[2025-10-12 07:40:03] 2025-10-12 14:39:28,966 | INFO     | . stage-out = 0 s
[2025-10-12 07:40:03] 2025-10-12 14:39:28,966 | INFO     | . log creation = 0 s
[2025-10-12 07:40:03] 2025-10-12 14:39:28,966 | INFO     | ..............................
[2025-10-12 07:40:03] 2025-10-12 14:39:28,966 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-12 07:40:03] 2025-10-12 14:39:28,966 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6839989817/pilotlog.txt
[2025-10-12 07:40:03] 2025-10-12 14:39:28,986 | INFO     | monitor loop #91: job 0:6839989817 is in state 'failed'
[2025-10-12 07:40:03] 2025-10-12 14:39:28,987 | INFO     | will abort job monitoring soon since job state=failed (job is still in queue)
[2025-10-12 07:40:03] 2025-10-12 14:39:29,055 | WARNING  | 
[2025-10-12 07:40:03] [begin log extracts]
[2025-10-12 07:40:03] - Log from pilotlog.txt -
[2025-10-12 07:40:03] 2025-10-12 14:39:28,958 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 07:40:03] 2025-10-12 14:39:28,958 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 07:40:03] 2025-10-12 14:39:28,964 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 07:40:03] 2025-10-12 14:39:28,964 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 07:40:03] 2025-10-12 14:39:28,965 | WARNING  | wrong length of table data, x=[1760279751.0, 1760279812.0], y=[1680.0, 574262.0] (must be same and length>=4)
[2025-10-12 07:40:03] 2025-10-12 14:39:28,965 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-10-12 07:40:03] 2025-10-12 14:39:28,965 | INFO     | ..............................
[2025-10-12 07:40:03] 2025-10-12 14:39:28,965 | INFO     | . Timing measurements:
[2025-10-12 07:40:03] 2025-10-12 14:39:28,965 | INFO     | . get job = 0 s
[2025-10-12 07:40:03] 2025-10-12 14:39:28,965 | INFO     | . initial setup = 6 s
[2025-10-12 07:40:03] 2025-10-12 14:39:28,965 | INFO     | . payload setup = 40 s
[2025-10-12 07:40:03] 2025-10-12 14:39:28,965 | INFO     | . stage-in = 0 s
[2025-10-12 07:40:03] 2025-10-12 14:39:28,965 | INFO     | . payload execution = 96 s
[2025-10-12 07:40:03] 2025-10-12 14:39:28,966 | INFO     | . stage-out = 0 s
[2025-10-12 07:40:03] 2025-10-12 14:39:28,966 | INFO     | . log creation = 0 s
[2025-10-12 07:40:03] 2025-10-12 14:39:28,966 | INFO     | ..............................
[2025-10-12 07:40:03] 2025-10-12 14:39:28,966 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-12 07:40:03] 2025-10-12 14:39:28,966 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6839989817/pilotlog.txt
[2025-10-12 07:40:03] 2025-10-12 14:39:28,986 | INFO     | monitor loop #91: job 0:6839989817 is in state 'failed'
[2025-10-12 07:40:03] 2025-10-12 14:39:28,987 | INFO     | will abort job monitoring soon since job state=failed (job is still in queue)
[2025-10-12 07:40:03] [end log extracts]
[2025-10-12 07:40:03] 2025-10-12 14:39:29,056 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-10-12 07:40:03] 2025-10-12 14:39:29,056 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-10-12 07:40:03] 2025-10-12 14:39:29,537 | INFO     | 
[2025-10-12 07:40:03] 2025-10-12 14:39:29,555 | INFO     | job summary report
[2025-10-12 07:40:03] 2025-10-12 14:39:29,555 | INFO     | --------------------------------------------------
[2025-10-12 07:40:03] 2025-10-12 14:39:29,555 | INFO     | PanDA job id: 6839989817
[2025-10-12 07:40:03] 2025-10-12 14:39:29,556 | INFO     | task id: 46676269
[2025-10-12 07:40:03] 2025-10-12 14:39:29,556 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-10-12 07:37:00,504 CRITICAL Transform executor raised TransformValidationExceptio
[2025-10-12 07:40:03] 2025-10-12 14:39:29,556 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 07:40:03] 2025-10-12 14:39:29,556 | INFO     | pilot state: failed 
[2025-10-12 07:40:03] 2025-10-12 14:39:29,556 | INFO     | transexitcode: 65
[2025-10-12 07:40:03] 2025-10-12 14:39:29,556 | INFO     | exeerrorcode: 65
[2025-10-12 07:40:03] 2025-10-12 14:39:29,556 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-10-12 07:40:03] 2025-10-12 14:39:29,556 | INFO     | exitcode: 65
[2025-10-12 07:40:03] 2025-10-12 14:39:29,556 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-10-12 07:40:03] 2025-10-12 14:39:29,556 | INFO     | cpuconsumptiontime: 20 s
[2025-10-12 07:40:03] 2025-10-12 14:39:29,556 | INFO     | nevents: 0
[2025-10-12 07:40:03] 2025-10-12 14:39:29,556 | INFO     | neventsw: 0
[2025-10-12 07:40:03] 2025-10-12 14:39:29,556 | INFO     | pid: 2094731
[2025-10-12 07:40:03] 2025-10-12 14:39:29,557 | INFO     | pgrp: 2094731
[2025-10-12 07:40:03] 2025-10-12 14:39:29,557 | INFO     | corecount: 8
[2025-10-12 07:40:03] 2025-10-12 14:39:29,557 | INFO     | event service: False
[2025-10-12 07:40:03] 2025-10-12 14:39:29,557 | INFO     | sizes: {0: 2348028, 1: 2348710, 2: 2348909, 13: 2348909, 24: 2349227, 35: 2349255, 140: 2372617, 141: 2376909, 143: 2376965, 278: 2377131}
[2025-10-12 07:40:03] 2025-10-12 14:39:29,566 | INFO     | --------------------------------------------------
[2025-10-12 07:40:03] 2025-10-12 14:39:29,566 | INFO     | 
[2025-10-12 07:40:03] 2025-10-12 14:39:29,566 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-10-12 07:40:03] 2025-10-12 14:39:29,587 | INFO     | time since job start (340s) is within the limit (172800.0s)
[2025-10-12 07:40:03] 2025-10-12 14:39:29,678 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 07:40:03] 2025-10-12 14:39:29,679 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 07:40:03] 2025-10-12 14:39:29,679 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 07:40:03] 2025-10-12 14:39:29,679 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 07:40:03] 2025-10-12 14:39:29,679 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 07:40:03] 2025-10-12 14:39:29,679 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 07:40:03] 2025-10-12 14:39:29,679 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 07:40:03] 2025-10-12 14:39:29,679 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 07:40:03] 2025-10-12 14:39:29,679 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 07:40:03] 2025-10-12 14:39:29,679 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 07:40:03] 2025-10-12 14:39:29,679 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 07:40:03] 2025-10-12 14:39:29,680 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 07:40:03] 2025-10-12 14:39:29,680 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 07:40:03] 2025-10-12 14:39:29,680 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 07:40:03] 2025-10-12 14:39:29,680 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 07:40:03] 2025-10-12 14:39:29,680 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 07:40:03] 2025-10-12 14:39:29,680 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 07:40:03] 2025-10-12 14:39:29,680 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 07:40:03] 2025-10-12 14:39:29,680 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 07:40:03] 2025-10-12 14:39:29,680 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 07:40:03] 2025-10-12 14:39:29,680 | INFO     | job 6839989817 has completed (purged errors)
[2025-10-12 07:40:03] 2025-10-12 14:39:29,680 | INFO     | overall cleanup function is called
[2025-10-12 07:40:03] 2025-10-12 14:39:30,687 | INFO     | --- collectZombieJob: --- 10, [2094731]
[2025-10-12 07:40:03] 2025-10-12 14:39:30,687 | INFO     | zombie collector waiting for pid 2094731
[2025-10-12 07:40:03] 2025-10-12 14:39:30,687 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 07:40:03] 2025-10-12 14:39:30,691 | INFO     | collected zombie processes
[2025-10-12 07:40:03] 2025-10-12 14:39:30,691 | INFO     | will attempt to kill all subprocesses of pid=2094731
[2025-10-12 07:40:03] 2025-10-12 14:39:31,200 | INFO     | process IDs to be killed: [2094731] (in reverse order)
[2025-10-12 07:40:03] 2025-10-12 14:39:31,288 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 07:40:03] 2025-10-12 14:39:31,289 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 07:40:03] 2025-10-12 14:39:31,321 | INFO     | did not find any defunct processes belonging to 2094731
[2025-10-12 07:40:03] 2025-10-12 14:39:31,342 | INFO     | did not find any defunct processes belonging to 2094731
[2025-10-12 07:40:03] 2025-10-12 14:39:31,343 | INFO     | ready for new job
[2025-10-12 07:40:03] 2025-10-12 14:39:31,345 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 07:40:03] 2025-10-12 14:39:31,346 | INFO     | ***************************************
[2025-10-12 07:40:03] 2025-10-12 14:39:31,346 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 07:40:03] 2025-10-12 14:39:31,346 | INFO     | ***************************************
[2025-10-12 07:40:03] 2025-10-12 14:39:31,346 | INFO     | 
[2025-10-12 07:40:03] 2025-10-12 14:39:31,355 | INFO     | architecture information:
[2025-10-12 07:40:03] 2025-10-12 14:39:31,373 | INFO     | executing command: cat /etc/os-release
[2025-10-12 07:40:03] 2025-10-12 14:39:31,419 | INFO     | cat /etc/os-release:
[2025-10-12 07:40:03] NAME="CentOS Linux"
[2025-10-12 07:40:03] VERSION="7 (Core)"
[2025-10-12 07:40:03] ID="centos"
[2025-10-12 07:40:03] ID_LIKE="rhel fedora"
[2025-10-12 07:40:03] VERSION_ID="7"
[2025-10-12 07:40:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 07:40:03] ANSI_COLOR="0;31"
[2025-10-12 07:40:03] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 07:40:03] HOME_URL="https://www.centos.org/"
[2025-10-12 07:40:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 07:40:03] 
[2025-10-12 07:40:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 07:40:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 07:40:03] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 07:40:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 07:40:03] 
[2025-10-12 07:40:03] 2025-10-12 14:39:31,420 | INFO     | ***************************************
[2025-10-12 07:40:03] 2025-10-12 14:39:31,923 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-10-12 07:40:03] 2025-10-12 14:39:32,105 | INFO     | sufficient remaining disk space (1259248549888 B)
[2025-10-12 07:40:03] 2025-10-12 14:39:32,105 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 07:40:03] 2025-10-12 14:39:32,105 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 07:40:03] 2025-10-12 14:39:32,106 | INFO     | update_server=False
[2025-10-12 07:40:03] 2025-10-12 14:39:32,106 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 07:40:03] 2025-10-12 14:39:32,106 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 07:40:03] 2025-10-12 14:39:32,511 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 07:40:03] 2025-10-12 14:39:32,512 | INFO     | aborting loop
[2025-10-12 07:40:03] 2025-10-12 14:39:32,884 | INFO     | all payload control threads have been joined
[2025-10-12 07:40:03] 2025-10-12 14:39:33,111 | INFO     | [job] retrieve thread has finished
[2025-10-12 07:40:03] 2025-10-12 14:39:33,131 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 07:40:03] 2025-10-12 14:39:33,202 | INFO     | all job control threads have been joined
[2025-10-12 07:40:03] 2025-10-12 14:39:33,207 | INFO     | all data control threads have been joined
[2025-10-12 07:40:03] 2025-10-12 14:39:33,295 | INFO     | [job] validate thread has finished
[2025-10-12 07:40:03] 2025-10-12 14:39:33,396 | INFO     | [payload] validate_post thread has finished
[2025-10-12 07:40:03] 2025-10-12 14:39:33,457 | INFO     | [data] copytool_in thread has finished
[2025-10-12 07:40:03] 2025-10-12 14:39:33,458 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 07:40:03] 2025-10-12 14:39:33,519 | INFO     | [job] job monitor thread has finished
[2025-10-12 07:40:03] 2025-10-12 14:39:33,670 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 07:40:03] 2025-10-12 14:39:33,890 | INFO     | [payload] control thread has finished
[2025-10-12 07:40:03] 2025-10-12 14:39:34,213 | INFO     | [data] control thread has finished
[2025-10-12 07:40:03] 2025-10-12 14:39:34,215 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 07:40:03] 2025-10-12 14:39:34,222 | INFO     | [job] control thread has finished
[2025-10-12 07:40:03] 2025-10-12 14:39:34,337 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 07:40:03] 2025-10-12 14:39:34,343 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 07:40:03] 2025-10-12 14:39:34,500 | INFO     | [payload] failed_post thread has finished
[2025-10-12 07:40:03] 2025-10-12 14:39:35,221 | INFO     | [job] queue monitor thread has finished
[2025-10-12 07:40:03] 2025-10-12 14:39:35,470 | INFO     | [data] copytool_out thread has finished
[2025-10-12 07:40:03] 2025-10-12 14:39:36,115 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 07:40:03] 2025-10-12 14:39:49,178 | INFO     | [monitor] cgroup control has ended
[2025-10-12 07:40:03] 2025-10-12 14:39:50,880 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140279527368512)>', '<ExcThread(monitor, started 140278832805632)>']
[2025-10-12 07:40:03] 2025-10-12 14:39:55,907 | INFO     | all workflow threads have been joined
[2025-10-12 07:40:03] 2025-10-12 14:39:55,907 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 07:40:03] 2025-10-12 14:39:55,907 | INFO     | traces error code: 0
[2025-10-12 07:40:03] 2025-10-12 14:39:55,908 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 07:40:03] 2025-10-12 14:40:03,070 | INFO     | PID=2087815 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 07:40:03] 2025-10-12 14:40:03,071 | INFO     | .. there are 33 such processes running
[2025-10-12 07:40:03] 2025-10-12 14:40:03,072 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 07:40:03] 2025-10-12 14:40:03,073 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 07:40:03] 2025-10-12 14:40:03,073 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 07:40:03] 2025-10-12 14:40:03,073 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 07:40:03] 2025-10-12 14:40:03,073 | INFO     | [monitor] control thread has ended
[2025-10-12 07:40:03] 2025-10-12 14:40:03,221 [wrapper] ==== pilot stdout END ====
[2025-10-12 07:40:03] 2025-10-12 14:40:03,226 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 07:40:03] 2025-10-12 14:40:03,229 [wrapper] pilotpid: 2087815
[2025-10-12 07:40:03] 2025-10-12 14:40:03,236 [wrapper] Pilot exit status: 0
[2025-10-12 07:40:03] 2025-10-12 14:40:03,291 [wrapper] pandaids: 6839989817
[2025-10-12 07:40:03] 2025-10-12 14:40:03,542 [wrapper] cleanup supervisor_pilot 2087821 2087816
[2025-10-12 07:40:03] 2025-10-12 14:40:03,553 [wrapper] Test setup, not cleaning
[2025-10-12 07:40:03] 2025-10-12 14:40:03,582 [wrapper] apfmon messages muted
[2025-10-12 07:40:03] 2025-10-12 14:40:03,606 [wrapper] ==== wrapper stdout END ====
[2025-10-12 07:40:03] 2025-10-12 14:40:03,620 [wrapper] ==== wrapper stderr END ====
[2025-10-12 07:40:03]  *** Error codes and diagnostics ***
[2025-10-12 07:40:03]     "exeErrorCode": 65,
[2025-10-12 07:40:03]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-10-12 07:40:03]     "pilotErrorCode": 1305,
[2025-10-12 07:40:03]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-10-12 07:40:03]  *** Listing of results directory ***
[2025-10-12 07:40:03] total 219704
[2025-10-12 07:40:03] -rw-r--r--. 1 boinc boinc      5112 Oct 12 06:05 queuedata.json
[2025-10-12 07:40:03] -rwx------. 1 boinc boinc     36292 Oct 12 06:05 runpilot2-wrapper.sh
[2025-10-12 07:40:03] -rw-r--r--. 1 boinc boinc    557409 Oct 12 06:05 pilot3.tar.gz
[2025-10-12 07:40:03] -rw-r--r--. 1 boinc boinc       100 Oct 12 07:33 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 07:40:03] -rwxr-xr-x. 1 boinc boinc      7986 Oct 12 07:33 run_atlas
[2025-10-12 07:40:03] -rw-r--r--. 1 boinc boinc       105 Oct 12 07:33 job.xml
[2025-10-12 07:40:03] -rw-r--r--. 1 boinc boinc      6443 Oct 12 07:33 init_data.xml
[2025-10-12 07:40:03] -rw-r--r--. 2 boinc boinc 220828865 Oct 12 07:33 EVNT.46676267._003853.pool.root.1
[2025-10-12 07:40:03] -rw-r--r--. 2 boinc boinc     15120 Oct 12 07:33 start_atlas.sh
[2025-10-12 07:40:03] drwxrwx--x. 2 boinc boinc      4096 Oct 12 07:33 shared
[2025-10-12 07:40:03] -rw-r--r--. 2 boinc boinc    569680 Oct 12 07:33 input.tar.gz
[2025-10-12 07:40:03] -rw-r--r--. 1 boinc boinc         0 Oct 12 07:33 boinc_lockfile
[2025-10-12 07:40:03] -rw-r--r--. 1 boinc boinc      2549 Oct 12 07:33 pandaJob.out
[2025-10-12 07:40:03] -rw-------. 1 boinc boinc    975528 Oct 12 07:33 agis_schedconf.cvmfs.json
[2025-10-12 07:40:03] -rw-------. 1 boinc boinc   1560580 Oct 12 07:33 agis_ddmendpoints.agis.ALL.json
[2025-10-12 07:40:03] drwx------. 5 boinc boinc      4096 Oct 12 07:33 pilot3
[2025-10-12 07:40:03] -rw-r--r--. 1 boinc boinc       525 Oct 12 07:37 boinc_task_state.xml
[2025-10-12 07:40:03] -rw-------. 1 boinc boinc       984 Oct 12 07:37 memory_monitor_summary.json
[2025-10-12 07:40:03] -rw-------. 1 boinc boinc     23279 Oct 12 07:37 log.46676269._079149.job.log.tgz.1
[2025-10-12 07:40:03] -rw-------. 1 boinc boinc      8395 Oct 12 07:39 heartbeat.json
[2025-10-12 07:40:03] -rw-r--r--. 1 boinc boinc      8192 Oct 12 07:39 boinc_mmap_file
[2025-10-12 07:40:03] -rw-r--r--. 1 boinc boinc        23 Oct 12 07:39 wrapper_checkpoint.txt
[2025-10-12 07:40:03] -rw-------. 1 boinc boinc        95 Oct 12 07:40 pilot_heartbeat.json
[2025-10-12 07:40:03] -rw-------. 1 boinc boinc       823 Oct 12 07:40 pilotlog.txt
[2025-10-12 07:40:03] -rw-------. 1 boinc boinc    102022 Oct 12 07:40 log.46676269._079149.job.log.1
[2025-10-12 07:40:03] -rw-------. 1 boinc boinc       188 Oct 12 07:40 output.list
[2025-10-12 07:40:03] -rw-r--r--. 1 boinc boinc       620 Oct 12 07:40 runtime_log
[2025-10-12 07:40:03] -rw-------. 1 boinc boinc    143360 Oct 12 07:40 result.tar.gz
[2025-10-12 07:40:03] -rw-r--r--. 1 boinc boinc      8526 Oct 12 07:40 runtime_log.err
[2025-10-12 07:40:03] -rw-------. 1 boinc boinc       644 Oct 12 07:40 AAzKDmtwAS8n9Rq4apOajLDm4fhM0noT9bVof3QYDm3xTMDmZwlGNm.diag
[2025-10-12 07:40:03] -rw-r--r--. 1 boinc boinc     21941 Oct 12 07:40 stderr.txt
[2025-10-12 07:40:04] No HITS result produced
[2025-10-12 07:40:04]  *** Contents of shared directory: ***
[2025-10-12 07:40:04] total 216376
[2025-10-12 07:40:04] -rw-r--r--. 2 boinc boinc 220828865 Oct 12 07:33 ATLAS.root_0
[2025-10-12 07:40:04] -rw-r--r--. 2 boinc boinc     15120 Oct 12 07:33 start_atlas.sh
[2025-10-12 07:40:04] -rw-r--r--. 2 boinc boinc    569680 Oct 12 07:33 input.tar.gz
[2025-10-12 07:40:04] -rw-------. 1 boinc boinc    143360 Oct 12 07:40 result.tar.gz
07:40:05 (2084045): run_atlas exited; CPU time 31.960074
07:40:05 (2084045): called boinc_finish(0)

</stderr_txt>
]]>

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