Stderr output

<core_client_version>8.3.0</core_client_version>
<![CDATA[
<stderr_txt>
18:23:04 (2145): wrapper (7.7.26015): starting
18:23:04 (2145): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 18:23:04] Arguments: --nthreads 8
[2025-10-12 18:23:04] Threads: 8
[2025-10-12 18:23:04] Checking for CVMFS
[2025-10-12 18:23:05] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 18:23:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 18:23:05] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 18:23:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 18:23:05] 2.11.0.0 4234 1591 37220 151625 3 1 339914 4096001 0 130560 0 7 13.333 49337 451 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2025-10-12 18:23:05] CVMFS is ok
[2025-10-12 18:23:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 18:23:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 18:23:05] Further information can be found at the LHC@home message board.
[2025-10-12 18:23:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 18:23:05] Checking for apptainer binary...
[2025-10-12 18:23:05] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2025-10-12 18:23:05] apptainer is not installed, using version from CVMFS
[2025-10-12 18:23:05] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 18:23:32] WARNING: Environment variable TMPDIR already has value [/tmp/job_10516882/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node014
[2025-10-12 18:23:32] apptainer works
[2025-10-12 18:23:35] Set ATHENA_PROC_NUMBER=8
[2025-10-12 18:23:35] Set ATHENA_CORE_NUMBER=8
[2025-10-12 18:23:35] Starting ATLAS job with PandaID=6839867454
[2025-10-12 18:23:35] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_10516882/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 19:22:44]  *** The last 200 lines of the pilot log: ***
[2025-10-12 19:22:44]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-12 19:22:44]  replicas=None
[2025-10-12 19:22:44]  scope=mc23_13p6TeV
[2025-10-12 19:22:44]  status=None
[2025-10-12 19:22:44]  status_code=0
[2025-10-12 19:22:44]  storage_token=
[2025-10-12 19:22:44]  surl=/tmp/job_10516882/atlas/pilot/slots/0/PanDA_Pilot-6839867454/log.46676269._076333.job.log.tgz.1
[2025-10-12 19:22:44]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/bb/0f/log.46676269._076333.job.log.tgz.1
[2025-10-12 19:22:44]  workdir=None
[2025-10-12 19:22:44] ]
[2025-10-12 19:22:44] 2025-10-12 17:21:40,026 | INFO     | transferring file log.46676269._076333.job.log.tgz.1 from /tmp/job_10516882/atlas/pilot/slots/0/PanDA_Pilot-6839867454/log.46676269._076333.job.log.tgz.1 to /tmp/j
[2025-10-12 19:22:44] 2025-10-12 17:21:40,026 | INFO     | executing command: /usr/bin/env mv /tmp/job_10516882/atlas/pilot/slots/0/PanDA_Pilot-6839867454/log.46676269._076333.job.log.tgz.1 /tmp/job_10516882/atlas/pilot/sl
[2025-10-12 19:22:44] 2025-10-12 17:21:40,033 | INFO     | adding to output.list: log.46676269._076333.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/bb/0f/log.46676269._076333.job.log.tg
[2025-10-12 19:22:44] 2025-10-12 17:21:40,034 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 19:22:44] 2025-10-12 17:21:40,034 | INFO     | summary of transferred files:
[2025-10-12 19:22:44] 2025-10-12 17:21:40,034 | INFO     |  -- lfn=log.46676269._076333.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 19:22:44] 2025-10-12 17:21:40,034 | INFO     | stage-out finished correctly
[2025-10-12 19:22:44] 2025-10-12 17:21:40,382 | INFO     | time since job start (3426s) is within the limit (172800.0s)
[2025-10-12 19:22:44] 2025-10-12 17:21:41,516 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 19:22:44] 2025-10-12 17:21:42,387 | INFO     | time since job start (3428s) is within the limit (172800.0s)
[2025-10-12 19:22:44] 2025-10-12 17:21:43,940 | WARNING  | process 668 can no longer be monitored (due to stat problems) - aborting
[2025-10-12 19:22:44] 2025-10-12 17:21:43,940 | INFO     | using path: /tmp/job_10516882/atlas/pilot/slots/0/PanDA_Pilot-6839867454/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 19:22:44] 2025-10-12 17:21:44,033 | INFO     | number of running child processes to parent process 668: 1
[2025-10-12 19:22:44] 2025-10-12 17:21:44,033 | INFO     | maximum number of monitored processes: 6
[2025-10-12 19:22:44] 2025-10-12 17:21:44,179 | INFO     | job 6839867454 has state=finished
[2025-10-12 19:22:44] 2025-10-12 17:21:44,179 | INFO     | preparing for final server update for job 6839867454 in state='finished'
[2025-10-12 19:22:44] 2025-10-12 17:21:44,392 | INFO     | time since job start (3430s) is within the limit (172800.0s)
[2025-10-12 19:22:44] 2025-10-12 17:21:44,741 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-10-12 19:22:44] 2025-10-12 17:21:44,741 | INFO     | this job has now completed (state=finished)
[2025-10-12 19:22:44] 2025-10-12 17:21:44,741 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 19:22:44] 2025-10-12 17:21:44,741 | INFO     | log transfer has been attempted: DONE
[2025-10-12 19:22:44] 2025-10-12 17:21:44,741 | INFO     | job 6839867454 has finished - writing final server update
[2025-10-12 19:22:44] 2025-10-12 17:21:44,741 | INFO     | total number of processed events: 400 (read)
[2025-10-12 19:22:44] 2025-10-12 17:21:44,741 | INFO     | executing command: lscpu
[2025-10-12 19:22:44] 2025-10-12 17:21:44,771 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 19:22:44] 2025-10-12 17:21:46,253 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-12 19:22:44] 2025-10-12 17:21:46,257 | INFO     | found 64 cores (32 cores per socket, 2 sockets) , CPU MHz: 2365.40428125
[2025-10-12 19:22:44] 2025-10-12 17:21:46,275 | INFO     | using path: /tmp/job_10516882/atlas/pilot/slots/0/PanDA_Pilot-6839867454/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 19:22:44] 2025-10-12 17:21:46,276 | INFO     | extracted standard info from prmon json
[2025-10-12 19:22:44] 2025-10-12 17:21:46,276 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 19:22:44] 2025-10-12 17:21:46,276 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 19:22:44] 2025-10-12 17:21:46,276 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 19:22:44] 2025-10-12 17:21:46,276 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 19:22:44] 2025-10-12 17:21:46,277 | INFO     | fitting pss+swap vs Time
[2025-10-12 19:22:44] 2025-10-12 17:21:46,277 | INFO     | sum of square deviations: 36465800.0
[2025-10-12 19:22:44] 2025-10-12 17:21:46,277 | INFO     | sum of deviations: 7233013878.0
[2025-10-12 19:22:44] 2025-10-12 17:21:46,277 | INFO     | mean x: 1760288107.0
[2025-10-12 19:22:44] 2025-10-12 17:21:46,277 | INFO     | mean y: 2419592.93877551
[2025-10-12 19:22:44] 2025-10-12 17:21:46,277 | INFO     | -- intersect: -349151810047.14453
[2025-10-12 19:22:44] 2025-10-12 17:21:46,277 | INFO     | intersect: -349151810047.14453
[2025-10-12 19:22:44] 2025-10-12 17:21:46,277 | INFO     | chi2: 0.6146099334463022
[2025-10-12 19:22:44] 2025-10-12 17:21:46,277 | INFO     | -- intersect: -349151810047.14453
[2025-10-12 19:22:44] 2025-10-12 17:21:46,277 | INFO     | current memory leak: 198.35 B/s (using 49 data points, chi2=0.61)
[2025-10-12 19:22:44] 2025-10-12 17:21:46,277 | INFO     | could have reported an average CPU frequency of 2726 MHz (5 samples)
[2025-10-12 19:22:44] 2025-10-12 17:21:46,278 | INFO     | ..............................
[2025-10-12 19:22:44] 2025-10-12 17:21:46,278 | INFO     | . Timing measurements:
[2025-10-12 19:22:44] 2025-10-12 17:21:46,278 | INFO     | . get job = 0 s
[2025-10-12 19:22:44] 2025-10-12 17:21:46,278 | INFO     | . initial setup = 4 s
[2025-10-12 19:22:44] 2025-10-12 17:21:46,278 | INFO     | . payload setup = 47 s
[2025-10-12 19:22:44] 2025-10-12 17:21:46,278 | INFO     | . stage-in = 0 s
[2025-10-12 19:22:44] 2025-10-12 17:21:46,278 | INFO     | . payload execution = 3361 s
[2025-10-12 19:22:44] 2025-10-12 17:21:46,278 | INFO     | . stage-out = 0 s
[2025-10-12 19:22:44] 2025-10-12 17:21:46,278 | INFO     | . log creation = 0 s
[2025-10-12 19:22:44] 2025-10-12 17:21:46,278 | INFO     | ..............................
[2025-10-12 19:22:44] 2025-10-12 17:21:46,397 | INFO     | time since job start (3432s) is within the limit (172800.0s)
[2025-10-12 19:22:44] 2025-10-12 17:21:46,440 | INFO     | 
[2025-10-12 19:22:44] 2025-10-12 17:21:46,440 | INFO     | job summary report
[2025-10-12 19:22:44] 2025-10-12 17:21:46,440 | INFO     | --------------------------------------------------
[2025-10-12 19:22:44] 2025-10-12 17:21:46,440 | INFO     | PanDA job id: 6839867454
[2025-10-12 19:22:44] 2025-10-12 17:21:46,440 | INFO     | task id: 46676269
[2025-10-12 19:22:44] 2025-10-12 17:21:46,440 | INFO     | errors: (none)
[2025-10-12 19:22:44] 2025-10-12 17:21:46,440 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 19:22:44] 2025-10-12 17:21:46,440 | INFO     | pilot state: finished 
[2025-10-12 19:22:44] 2025-10-12 17:21:46,440 | INFO     | transexitcode: 0
[2025-10-12 19:22:44] 2025-10-12 17:21:46,440 | INFO     | exeerrorcode: 0
[2025-10-12 19:22:44] 2025-10-12 17:21:46,440 | INFO     | exeerrordiag: 
[2025-10-12 19:22:44] 2025-10-12 17:21:46,440 | INFO     | exitcode: 0
[2025-10-12 19:22:44] 2025-10-12 17:21:46,440 | INFO     | exitmsg: OK
[2025-10-12 19:22:44] 2025-10-12 17:21:46,440 | INFO     | cpuconsumptiontime: 20662 s
[2025-10-12 19:22:44] 2025-10-12 17:21:46,440 | INFO     | nevents: 400
[2025-10-12 19:22:44] 2025-10-12 17:21:46,440 | INFO     | neventsw: 0
[2025-10-12 19:22:44] 2025-10-12 17:21:46,440 | INFO     | pid: 668
[2025-10-12 19:22:44] 2025-10-12 17:21:46,440 | INFO     | pgrp: 668
[2025-10-12 19:22:44] 2025-10-12 17:21:46,440 | INFO     | corecount: 8
[2025-10-12 19:22:44] 2025-10-12 17:21:46,440 | INFO     | event service: False
[2025-10-12 19:22:44] 2025-10-12 17:21:46,440 | INFO     | sizes: {0: 2348029, 1: 2349011, 3: 2349273, 12: 2349301, 3412: 2374912, 3413: 2383940, 3414: 2384124, 3419: 2384350}
[2025-10-12 19:22:44] 2025-10-12 17:21:46,440 | INFO     | --------------------------------------------------
[2025-10-12 19:22:44] 2025-10-12 17:21:46,440 | INFO     | 
[2025-10-12 19:22:44] 2025-10-12 17:21:46,440 | INFO     | executing command: ls -lF /tmp/job_10516882/atlas/pilot/slots/0
[2025-10-12 19:22:44] 2025-10-12 17:21:46,449 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 19:22:44] 2025-10-12 17:21:46,449 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 19:22:44] 2025-10-12 17:21:46,449 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 19:22:44] 2025-10-12 17:21:46,449 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 19:22:44] 2025-10-12 17:21:46,449 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 19:22:44] 2025-10-12 17:21:46,449 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 19:22:44] 2025-10-12 17:21:46,449 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 19:22:44] 2025-10-12 17:21:46,449 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 19:22:44] 2025-10-12 17:21:46,449 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 19:22:44] 2025-10-12 17:21:46,449 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 19:22:44] 2025-10-12 17:21:46,449 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 19:22:44] 2025-10-12 17:21:46,449 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 19:22:44] 2025-10-12 17:21:46,449 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 19:22:44] 2025-10-12 17:21:46,449 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 19:22:44] 2025-10-12 17:21:46,450 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 19:22:44] 2025-10-12 17:21:46,450 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 19:22:44] 2025-10-12 17:21:46,450 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 19:22:44] 2025-10-12 17:21:46,450 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 19:22:44] 2025-10-12 17:21:46,450 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 19:22:44] 2025-10-12 17:21:46,450 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 19:22:44] 2025-10-12 17:21:46,450 | INFO     | job 6839867454 has completed (purged errors)
[2025-10-12 19:22:44] 2025-10-12 17:21:46,450 | INFO     | overall cleanup function is called
[2025-10-12 19:22:44] 2025-10-12 17:21:47,456 | INFO     | --- collectZombieJob: --- 10, [668]
[2025-10-12 19:22:44] 2025-10-12 17:21:47,456 | INFO     | zombie collector waiting for pid 668
[2025-10-12 19:22:44] 2025-10-12 17:21:47,456 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 19:22:44] 2025-10-12 17:21:47,456 | INFO     | collected zombie processes
[2025-10-12 19:22:44] 2025-10-12 17:21:47,456 | INFO     | will attempt to kill all subprocesses of pid=668
[2025-10-12 19:22:44] 2025-10-12 17:21:47,553 | INFO     | process IDs to be killed: [668] (in reverse order)
[2025-10-12 19:22:44] 2025-10-12 17:21:47,586 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 19:22:44] 2025-10-12 17:21:47,587 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 19:22:44] 2025-10-12 17:21:47,590 | INFO     | did not find any defunct processes belonging to 668
[2025-10-12 19:22:44] 2025-10-12 17:21:47,593 | INFO     | did not find any defunct processes belonging to 668
[2025-10-12 19:22:44] 2025-10-12 17:21:47,593 | INFO     | ready for new job
[2025-10-12 19:22:44] 2025-10-12 17:21:47,593 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 19:22:44] 2025-10-12 17:21:47,594 | INFO     | ***************************************
[2025-10-12 19:22:44] 2025-10-12 17:21:47,594 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 19:22:44] 2025-10-12 17:21:47,594 | INFO     | ***************************************
[2025-10-12 19:22:44] 2025-10-12 17:21:47,594 | INFO     | 
[2025-10-12 19:22:44] 2025-10-12 17:21:47,609 | INFO     | architecture information:
[2025-10-12 19:22:44] 2025-10-12 17:21:47,609 | INFO     | executing command: cat /etc/os-release
[2025-10-12 19:22:44] 2025-10-12 17:21:47,614 | INFO     | cat /etc/os-release:
[2025-10-12 19:22:44] NAME="CentOS Linux"
[2025-10-12 19:22:44] VERSION="7 (Core)"
[2025-10-12 19:22:44] ID="centos"
[2025-10-12 19:22:44] ID_LIKE="rhel fedora"
[2025-10-12 19:22:44] VERSION_ID="7"
[2025-10-12 19:22:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 19:22:44] ANSI_COLOR="0;31"
[2025-10-12 19:22:44] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 19:22:44] HOME_URL="https://www.centos.org/"
[2025-10-12 19:22:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 19:22:44] 
[2025-10-12 19:22:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 19:22:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 19:22:44] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 19:22:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 19:22:44] 
[2025-10-12 19:22:44] 2025-10-12 17:21:47,615 | INFO     | ***************************************
[2025-10-12 19:22:44] 2025-10-12 17:21:48,117 | INFO     | executing command: df -mP /tmp/job_10516882/atlas/pilot/slots/0
[2025-10-12 19:22:44] 2025-10-12 17:21:48,123 | INFO     | sufficient remaining disk space (225203716096 B)
[2025-10-12 19:22:44] 2025-10-12 17:21:48,123 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 19:22:44] 2025-10-12 17:21:48,123 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 19:22:44] 2025-10-12 17:21:48,123 | INFO     | update_server=False
[2025-10-12 19:22:44] 2025-10-12 17:21:48,123 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 19:22:44] 2025-10-12 17:21:48,123 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 19:22:44] 2025-10-12 17:21:48,123 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-10-12 19:22:44] 2025-10-12 17:21:48,123 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 19:22:44] 2025-10-12 17:21:48,123 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 19:22:44] 2025-10-12 17:21:48,123 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 19:22:44] 2025-10-12 17:21:48,123 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 19:22:44] 2025-10-12 17:21:48,124 | INFO     | aborting loop
[2025-10-12 19:22:44] 2025-10-12 17:21:48,124 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 19:22:44] 2025-10-12 17:21:48,124 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 19:22:44] 2025-10-12 17:21:48,864 | INFO     | all data control threads have been joined
[2025-10-12 19:22:44] 2025-10-12 17:21:49,118 | INFO     | all payload control threads have been joined
[2025-10-12 19:22:44] 2025-10-12 17:21:49,128 | INFO     | [job] job monitor thread has finished
[2025-10-12 19:22:44] 2025-10-12 17:21:49,128 | INFO     | [job] retrieve thread has finished
[2025-10-12 19:22:44] 2025-10-12 17:21:49,128 | INFO     | [job] queue monitor thread has finished
[2025-10-12 19:22:44] 2025-10-12 17:21:49,314 | INFO     | [job] validate thread has finished
[2025-10-12 19:22:44] 2025-10-12 17:21:49,343 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 19:22:44] 2025-10-12 17:21:49,460 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 19:22:44] 2025-10-12 17:21:49,548 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 19:22:44] 2025-10-12 17:21:49,606 | INFO     | [payload] failed_post thread has finished
[2025-10-12 19:22:44] 2025-10-12 17:21:49,610 | INFO     | all job control threads have been joined
[2025-10-12 19:22:44] 2025-10-12 17:21:49,869 | INFO     | [data] control thread has finished
[2025-10-12 19:22:44] 2025-10-12 17:21:50,123 | INFO     | [payload] control thread has finished
[2025-10-12 19:22:44] 2025-10-12 17:21:50,128 | INFO     | [data] copytool_out thread has finished
[2025-10-12 19:22:44] 2025-10-12 17:21:50,271 | INFO     | [payload] validate_post thread has finished
[2025-10-12 19:22:44] 2025-10-12 17:21:50,403 | INFO     | [data] copytool_in thread has finished
[2025-10-12 19:22:44] 2025-10-12 17:21:50,615 | INFO     | [job] control thread has finished
[2025-10-12 19:22:44] 2025-10-12 17:21:52,128 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 19:22:44] 2025-10-12 17:21:59,163 | INFO     | job.realtimelogging is not enabled
[2025-10-12 19:22:44] 2025-10-12 17:22:00,168 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 19:22:44] 2025-10-12 17:22:38,922 | INFO     | [monitor] cgroup control has ended
[2025-10-12 19:22:44] 2025-10-12 17:22:38,989 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456062568192)>']
[2025-10-12 19:22:44] 2025-10-12 17:22:39,378 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 19:22:44] 2025-10-12 17:22:39,378 | INFO     | [monitor] control thread has ended
[2025-10-12 19:22:44] 2025-10-12 17:22:44,014 | INFO     | all workflow threads have been joined
[2025-10-12 19:22:44] 2025-10-12 17:22:44,014 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 19:22:44] 2025-10-12 17:22:44,014 | INFO     | traces error code: 0
[2025-10-12 19:22:44] 2025-10-12 17:22:44,014 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 19:22:44] 2025-10-12 17:22:44,066 [wrapper] ==== pilot stdout END ====
[2025-10-12 19:22:44] 2025-10-12 17:22:44,067 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 19:22:44] 2025-10-12 17:22:44,068 [wrapper] pilotpid: 25786
[2025-10-12 19:22:44] 2025-10-12 17:22:44,068 [wrapper] Pilot exit status: 0
[2025-10-12 19:22:44] 2025-10-12 17:22:44,072 [wrapper] pandaids: 6839867454
[2025-10-12 19:22:44] 2025-10-12 17:22:44,094 [wrapper] cleanup supervisor_pilot 10913 25790
[2025-10-12 19:22:44] 2025-10-12 17:22:44,095 [wrapper] Test setup, not cleaning
[2025-10-12 19:22:44] 2025-10-12 17:22:44,096 [wrapper] apfmon messages muted
[2025-10-12 19:22:44] 2025-10-12 17:22:44,097 [wrapper] ==== wrapper stdout END ====
[2025-10-12 19:22:44] 2025-10-12 17:22:44,098 [wrapper] ==== wrapper stderr END ====
[2025-10-12 19:22:44]  *** Error codes and diagnostics ***
[2025-10-12 19:22:44]     "exeErrorCode": 0,
[2025-10-12 19:22:44]     "exeErrorDiag": "",
[2025-10-12 19:22:44]     "pilotErrorCode": 0,
[2025-10-12 19:22:44]     "pilotErrorDiag": "",
[2025-10-12 19:22:44]  *** Listing of results directory ***
[2025-10-12 19:22:44] total 407700
[2025-10-12 19:22:44] -rw------- 1 mf493845 unix-user    557409 Oct 12 12:38 pilot3.tar.gz
[2025-10-12 19:22:44] -rw------- 1 mf493845 unix-user      5112 Oct 12 12:53 queuedata.json
[2025-10-12 19:22:44] -rwx------ 1 mf493845 unix-user     36292 Oct 12 12:55 runpilot2-wrapper.sh
[2025-10-12 19:22:44] -rw------- 1 mf493845 unix-user       100 Oct 12 17:27 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 19:22:44] -rwxr-xr-x 1 mf493845 unix-user      7986 Oct 12 17:27 run_atlas
[2025-10-12 19:22:44] -rw------- 1 mf493845 unix-user       105 Oct 12 17:27 job.xml
[2025-10-12 19:22:44] -rw-r--r-- 2 mf493845 unix-user 218597079 Oct 12 18:23 EVNT.46676267._003632.pool.root.1
[2025-10-12 19:22:44] -rw-r--r-- 2 mf493845 unix-user     15120 Oct 12 18:23 start_atlas.sh
[2025-10-12 19:22:44] drwxrwx--x 2 mf493845 unix-user       100 Oct 12 18:23 shared
[2025-10-12 19:22:44] -rw-r--r-- 2 mf493845 unix-user    569685 Oct 12 18:23 input.tar.gz
[2025-10-12 19:22:44] -rw------- 1 mf493845 unix-user      6392 Oct 12 18:23 init_data.xml
[2025-10-12 19:22:44] -rw------- 1 mf493845 unix-user         0 Oct 12 18:23 boinc_setup_complete
[2025-10-12 19:22:44] -rw------- 1 mf493845 unix-user      8192 Oct 12 18:23 boinc_mmap_file
[2025-10-12 19:22:44] -rw------- 1 mf493845 unix-user         0 Oct 12 18:23 boinc_lockfile
[2025-10-12 19:22:44] -rw------- 1 mf493845 unix-user      2550 Oct 12 18:23 pandaJob.out
[2025-10-12 19:22:44] -rw------- 1 mf493845 unix-user    975528 Oct 12 18:24 agis_schedconf.cvmfs.json
[2025-10-12 19:22:44] -rw------- 1 mf493845 unix-user   1560580 Oct 12 18:24 agis_ddmendpoints.agis.ALL.json
[2025-10-12 19:22:44] drwx------ 5 mf493845 unix-user       440 Oct 12 18:24 pilot3
[2025-10-12 19:22:44] -rw------- 1 mf493845 unix-user 193309673 Oct 12 19:21 HITS.46676269._076333.pool.root.1
[2025-10-12 19:22:44] -rw------- 1 mf493845 unix-user        95 Oct 12 19:21 pilot_heartbeat.json
[2025-10-12 19:22:44] -rw------- 1 mf493845 unix-user      1020 Oct 12 19:21 memory_monitor_summary.json
[2025-10-12 19:22:44] -rw------- 1 mf493845 unix-user    313702 Oct 12 19:21 log.46676269._076333.job.log.tgz.1
[2025-10-12 19:22:44] -rw------- 1 mf493845 unix-user      7779 Oct 12 19:21 heartbeat.json
[2025-10-12 19:22:44] -rw------- 1 mf493845 unix-user      4638 Oct 12 19:22 pilotlog.txt
[2025-10-12 19:22:44] -rw------- 1 mf493845 unix-user    533531 Oct 12 19:22 log.46676269._076333.job.log.1
[2025-10-12 19:22:44] -rw------- 1 mf493845 unix-user       357 Oct 12 19:22 output.list
[2025-10-12 19:22:44] -rw------- 1 mf493845 unix-user       620 Oct 12 19:22 runtime_log
[2025-10-12 19:22:44] -rw------- 1 mf493845 unix-user    870400 Oct 12 19:22 result.tar.gz
[2025-10-12 19:22:44] -rw------- 1 mf493845 unix-user      9076 Oct 12 19:22 runtime_log.err
[2025-10-12 19:22:44] -rw------- 1 mf493845 unix-user       642 Oct 12 19:22 1C2NDmru8R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmdWjNDm7pBccn.diag
[2025-10-12 19:22:44] -rw------- 1 mf493845 unix-user     22242 Oct 12 19:22 stderr.txt
[2025-10-12 19:22:44] HITS file was successfully produced:
[2025-10-12 19:22:44] -rw------- 1 mf493845 unix-user 193309673 Oct 12 19:21 shared/HITS.pool.root.1
[2025-10-12 19:22:44]  *** Contents of shared directory: ***
[2025-10-12 19:22:44] total 403684
[2025-10-12 19:22:44] -rw-r--r-- 2 mf493845 unix-user 218597079 Oct 12 18:23 ATLAS.root_0
[2025-10-12 19:22:44] -rw-r--r-- 2 mf493845 unix-user     15120 Oct 12 18:23 start_atlas.sh
[2025-10-12 19:22:44] -rw-r--r-- 2 mf493845 unix-user    569685 Oct 12 18:23 input.tar.gz
[2025-10-12 19:22:44] -rw------- 1 mf493845 unix-user 193309673 Oct 12 19:21 HITS.pool.root.1
[2025-10-12 19:22:44] -rw------- 1 mf493845 unix-user    870400 Oct 12 19:22 result.tar.gz
19:22:45 (2145): run_atlas exited; CPU time 20710.425671
19:22:45 (2145): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN