Stderr output

<core_client_version>7.24.5</core_client_version>
<![CDATA[
<stderr_txt>
08:32:00 (487978): wrapper (7.7.26015): starting
08:32:00 (487978): wrapper: running run_atlas (--nthreads 4)
[2025-10-12 08:32:00] Arguments: --nthreads 4
[2025-10-12 08:32:00] Threads: 4
[2025-10-12 08:32:00] Checking for CVMFS
[2025-10-12 08:32:00] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 08:32:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 08:32:00] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 08:32:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 08:32:00] 2.11.3.0 1528564 4552 67620 151623 2 187 2831408 4096000 5458 130560 0 19867683 99.998 154051 676 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-12 08:32:00] CVMFS is ok
[2025-10-12 08:32:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 08:32:00] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-12 08:32:00] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-12 08:32:00] Further information can be found at the LHC@home message board.
[2025-10-12 08:32:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 08:32:00] Checking for apptainer binary...
[2025-10-12 08:32:00] apptainer is not installed, using version from CVMFS
[2025-10-12 08:32:00] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 08:32:00] officedc-System-Product-Name
[2025-10-12 08:32:00] apptainer works
[2025-10-12 08:32:00] Set ATHENA_PROC_NUMBER=4
[2025-10-12 08:32:00] Set ATHENA_CORE_NUMBER=4
[2025-10-12 08:32:00] Starting ATLAS job with PandaID=6839658280
[2025-10-12 08:32:00] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc3/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 10:26:27]  *** The last 200 lines of the pilot log: ***
[2025-10-12 10:26:27] 2025-10-12 16:25:30,594 | INFO     | maximum number of monitored processes: 6
[2025-10-12 10:26:27] 2025-10-12 16:25:31,863 | INFO     | time since job start (6802s) is within the limit (172800.0s)
[2025-10-12 10:26:27] 2025-10-12 16:25:32,417 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-12 10:26:27] 2025-10-12 16:25:32,421 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 3999.8896875
[2025-10-12 10:26:27] 2025-10-12 16:25:32,425 | INFO     | using path: /var/lib/boinc3/slots/0/PanDA_Pilot-6839658280/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 10:26:27] 2025-10-12 16:25:32,425 | INFO     | extracted standard info from prmon json
[2025-10-12 10:26:27] 2025-10-12 16:25:32,425 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 10:26:27] 2025-10-12 16:25:32,425 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 10:26:27] 2025-10-12 16:25:32,425 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 10:26:27] 2025-10-12 16:25:32,425 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 10:26:27] 2025-10-12 16:25:32,427 | INFO     | fitting pss+swap vs Time
[2025-10-12 10:26:27] 2025-10-12 16:25:32,427 | INFO     | sum of square deviations: 424045160.0
[2025-10-12 10:26:27] 2025-10-12 16:25:32,427 | INFO     | sum of deviations: 3100209466.000001
[2025-10-12 10:26:27] 2025-10-12 16:25:32,428 | INFO     | mean x: 1760282906.0
[2025-10-12 10:26:27] 2025-10-12 16:25:32,428 | INFO     | mean y: 2327651.135135135
[2025-10-12 10:26:27] 2025-10-12 16:25:32,428 | INFO     | -- intersect: -12867164192.656195
[2025-10-12 10:26:27] 2025-10-12 16:25:32,428 | INFO     | intersect: -12867164192.656195
[2025-10-12 10:26:27] 2025-10-12 16:25:32,428 | INFO     | chi2: 1.3662186618556786
[2025-10-12 10:26:27] 2025-10-12 16:25:32,428 | INFO     | sum of square deviations: 369281342.5
[2025-10-12 10:26:27] 2025-10-12 16:25:32,428 | INFO     | sum of deviations: 3126961412.5000024
[2025-10-12 10:26:27] 2025-10-12 16:25:32,429 | INFO     | mean x: 1760282753.5
[2025-10-12 10:26:27] 2025-10-12 16:25:32,429 | INFO     | mean y: 2327725.5188679243
[2025-10-12 10:26:27] 2025-10-12 16:25:32,429 | INFO     | -- intersect: -14903208005.09756
[2025-10-12 10:26:27] 2025-10-12 16:25:32,429 | INFO     | intersect: -14903208005.09756
[2025-10-12 10:26:27] 2025-10-12 16:25:32,429 | INFO     | chi2: 1.3682986734168205
[2025-10-12 10:26:27] 2025-10-12 16:25:32,429 | INFO     | current chi2=1.3682986734168205 (change=-0.1522458753649807 %)
[2025-10-12 10:26:27] 2025-10-12 16:25:32,429 | INFO     | right removable region: 105
[2025-10-12 10:26:27] 2025-10-12 16:25:32,429 | INFO     | sum of square deviations: 369281342.5
[2025-10-12 10:26:27] 2025-10-12 16:25:32,429 | INFO     | sum of deviations: -9376072893.0
[2025-10-12 10:26:27] 2025-10-12 16:25:32,429 | INFO     | mean x: 1760283058.5
[2025-10-12 10:26:27] 2025-10-12 16:25:32,430 | INFO     | mean y: 2361387.4905660376
[2025-10-12 10:26:27] 2025-10-12 16:25:32,430 | INFO     | -- intersect: 44696041704.71099
[2025-10-12 10:26:27] 2025-10-12 16:25:32,430 | INFO     | intersect: 44696041704.71099
[2025-10-12 10:26:27] 2025-10-12 16:25:32,430 | INFO     | chi2: 0.02414538789654174
[2025-10-12 10:26:27] 2025-10-12 16:25:32,430 | INFO     | current chi2=0.02414538789654174 (change=98.23268495954038 %)
[2025-10-12 10:26:27] 2025-10-12 16:25:32,430 | INFO     | sum of square deviations: 319447850.0
[2025-10-12 10:26:27] 2025-10-12 16:25:32,430 | INFO     | sum of deviations: -7218266762.0
[2025-10-12 10:26:27] 2025-10-12 16:25:32,430 | INFO     | mean x: 1760283211.0
[2025-10-12 10:26:27] 2025-10-12 16:25:32,430 | INFO     | mean y: 2354774.6534653464
[2025-10-12 10:26:27] 2025-10-12 16:25:32,430 | INFO     | -- intersect: 39777841739.63987
[2025-10-12 10:26:27] 2025-10-12 16:25:32,431 | INFO     | intersect: 39777841739.63987
[2025-10-12 10:26:27] 2025-10-12 16:25:32,431 | INFO     | chi2: 0.020892133959993613
[2025-10-12 10:26:27] 2025-10-12 16:25:32,431 | INFO     | current chi2=0.020892133959993613 (change=13.473603946590895 %)
[2025-10-12 10:26:27] 2025-10-12 16:25:32,431 | INFO     | left removable region: 20
[2025-10-12 10:26:27] 2025-10-12 16:25:32,431 | INFO     | sum of square deviations: 190403570.0
[2025-10-12 10:26:27] 2025-10-12 16:25:32,431 | INFO     | sum of deviations: -3657034302.0
[2025-10-12 10:26:27] 2025-10-12 16:25:32,431 | INFO     | mean x: 1760283333.0
[2025-10-12 10:26:27] 2025-10-12 16:25:32,431 | INFO     | mean y: 2344561.4470588234
[2025-10-12 10:26:27] 2025-10-12 16:25:32,431 | INFO     | -- intersect: 33811671403.47995
[2025-10-12 10:26:27] 2025-10-12 16:25:32,431 | INFO     | intersect: 33811671403.47995
[2025-10-12 10:26:27] 2025-10-12 16:25:32,432 | INFO     | chi2: 0.012909603035057681
[2025-10-12 10:26:27] 2025-10-12 16:25:32,432 | INFO     | -- intersect: 33811671403.47995
[2025-10-12 10:26:27] 2025-10-12 16:25:32,432 | INFO     | current memory leak: -19.21 B/s (using 85 data points, chi2=0.01)
[2025-10-12 10:26:27] 2025-10-12 16:25:32,432 | INFO     | could have reported an average CPU frequency of 3983 MHz (7 samples)
[2025-10-12 10:26:27] 2025-10-12 16:25:32,432 | INFO     | ..............................
[2025-10-12 10:26:27] 2025-10-12 16:25:32,432 | INFO     | . Timing measurements:
[2025-10-12 10:26:27] 2025-10-12 16:25:32,432 | INFO     | . get job = 0 s
[2025-10-12 10:26:27] 2025-10-12 16:25:32,432 | INFO     | . initial setup = 2 s
[2025-10-12 10:26:27] 2025-10-12 16:25:32,432 | INFO     | . payload setup = 4 s
[2025-10-12 10:26:27] 2025-10-12 16:25:32,432 | INFO     | . stage-in = 0 s
[2025-10-12 10:26:27] 2025-10-12 16:25:32,432 | INFO     | . payload execution = 6774 s
[2025-10-12 10:26:27] 2025-10-12 16:25:32,432 | INFO     | . stage-out = 0 s
[2025-10-12 10:26:27] 2025-10-12 16:25:32,432 | INFO     | . log creation = 0 s
[2025-10-12 10:26:27] 2025-10-12 16:25:32,432 | INFO     | ..............................
[2025-10-12 10:26:27] 2025-10-12 16:25:32,503 | INFO     | 
[2025-10-12 10:26:27] 2025-10-12 16:25:32,504 | INFO     | job summary report
[2025-10-12 10:26:27] 2025-10-12 16:25:32,504 | INFO     | --------------------------------------------------
[2025-10-12 10:26:27] 2025-10-12 16:25:32,504 | INFO     | PanDA job id: 6839658280
[2025-10-12 10:26:27] 2025-10-12 16:25:32,504 | INFO     | task id: 46676269
[2025-10-12 10:26:27] 2025-10-12 16:25:32,504 | INFO     | errors: (none)
[2025-10-12 10:26:27] 2025-10-12 16:25:32,504 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 10:26:27] 2025-10-12 16:25:32,504 | INFO     | pilot state: finished 
[2025-10-12 10:26:27] 2025-10-12 16:25:32,504 | INFO     | transexitcode: 0
[2025-10-12 10:26:27] 2025-10-12 16:25:32,504 | INFO     | exeerrorcode: 0
[2025-10-12 10:26:27] 2025-10-12 16:25:32,504 | INFO     | exeerrordiag: 
[2025-10-12 10:26:27] 2025-10-12 16:25:32,504 | INFO     | exitcode: 0
[2025-10-12 10:26:27] 2025-10-12 16:25:32,504 | INFO     | exitmsg: OK
[2025-10-12 10:26:27] 2025-10-12 16:25:32,504 | INFO     | cpuconsumptiontime: 26075 s
[2025-10-12 10:26:27] 2025-10-12 16:25:32,504 | INFO     | nevents: 400
[2025-10-12 10:26:27] 2025-10-12 16:25:32,504 | INFO     | neventsw: 0
[2025-10-12 10:26:27] 2025-10-12 16:25:32,504 | INFO     | pid: 498467
[2025-10-12 10:26:27] 2025-10-12 16:25:32,504 | INFO     | pgrp: 498467
[2025-10-12 10:26:27] 2025-10-12 16:25:32,505 | INFO     | corecount: 4
[2025-10-12 10:26:27] 2025-10-12 16:25:32,505 | INFO     | event service: False
[2025-10-12 10:26:27] 2025-10-12 16:25:32,505 | INFO     | sizes: {0: 2348858, 3: 2349120, 11: 2349148, 6782: 2376437, 6783: 2385437, 6784: 2385493, 6789: 2385815}
[2025-10-12 10:26:27] 2025-10-12 16:25:32,505 | INFO     | --------------------------------------------------
[2025-10-12 10:26:27] 2025-10-12 16:25:32,505 | INFO     | 
[2025-10-12 10:26:27] 2025-10-12 16:25:32,505 | INFO     | executing command: ls -lF /var/lib/boinc3/slots/0
[2025-10-12 10:26:27] 2025-10-12 16:25:32,529 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 10:26:27] 2025-10-12 16:25:32,529 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 10:26:27] 2025-10-12 16:25:32,529 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 10:26:27] 2025-10-12 16:25:32,529 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 10:26:27] 2025-10-12 16:25:32,529 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 10:26:27] 2025-10-12 16:25:32,529 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 10:26:27] 2025-10-12 16:25:32,529 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 10:26:27] 2025-10-12 16:25:32,529 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 10:26:27] 2025-10-12 16:25:32,529 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 10:26:27] 2025-10-12 16:25:32,529 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 10:26:27] 2025-10-12 16:25:32,530 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 10:26:27] 2025-10-12 16:25:32,530 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 10:26:27] 2025-10-12 16:25:32,530 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 10:26:27] 2025-10-12 16:25:32,530 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 10:26:27] 2025-10-12 16:25:32,530 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 10:26:27] 2025-10-12 16:25:32,530 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 10:26:27] 2025-10-12 16:25:32,530 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 10:26:27] 2025-10-12 16:25:32,530 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 10:26:27] 2025-10-12 16:25:32,530 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 10:26:27] 2025-10-12 16:25:32,530 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 10:26:27] 2025-10-12 16:25:32,530 | INFO     | job 6839658280 has completed (purged errors)
[2025-10-12 10:26:27] 2025-10-12 16:25:32,530 | INFO     | overall cleanup function is called
[2025-10-12 10:26:27] 2025-10-12 16:25:33,538 | INFO     | --- collectZombieJob: --- 10, [498467]
[2025-10-12 10:26:27] 2025-10-12 16:25:33,538 | INFO     | zombie collector waiting for pid 498467
[2025-10-12 10:26:27] 2025-10-12 16:25:33,538 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 10:26:27] 2025-10-12 16:25:33,539 | INFO     | collected zombie processes
[2025-10-12 10:26:27] 2025-10-12 16:25:33,539 | INFO     | will attempt to kill all subprocesses of pid=498467
[2025-10-12 10:26:27] 2025-10-12 16:25:33,682 | INFO     | process IDs to be killed: [498467] (in reverse order)
[2025-10-12 10:26:27] 2025-10-12 16:25:33,747 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 10:26:27] 2025-10-12 16:25:33,747 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 10:26:27] 2025-10-12 16:25:33,752 | INFO     | did not find any defunct processes belonging to 498467
[2025-10-12 10:26:27] 2025-10-12 16:25:33,756 | INFO     | did not find any defunct processes belonging to 498467
[2025-10-12 10:26:27] 2025-10-12 16:25:33,756 | INFO     | ready for new job
[2025-10-12 10:26:27] 2025-10-12 16:25:33,756 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 10:26:27] 2025-10-12 16:25:33,758 | INFO     | ***************************************
[2025-10-12 10:26:27] 2025-10-12 16:25:33,758 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 10:26:27] 2025-10-12 16:25:33,758 | INFO     | ***************************************
[2025-10-12 10:26:27] 2025-10-12 16:25:33,758 | INFO     | 
[2025-10-12 10:26:27] 2025-10-12 16:25:33,760 | INFO     | architecture information:
[2025-10-12 10:26:27] 2025-10-12 16:25:33,760 | INFO     | executing command: cat /etc/os-release
[2025-10-12 10:26:27] 2025-10-12 16:25:33,772 | INFO     | cat /etc/os-release:
[2025-10-12 10:26:27] NAME="CentOS Linux"
[2025-10-12 10:26:27] VERSION="7 (Core)"
[2025-10-12 10:26:27] ID="centos"
[2025-10-12 10:26:27] ID_LIKE="rhel fedora"
[2025-10-12 10:26:27] VERSION_ID="7"
[2025-10-12 10:26:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 10:26:27] ANSI_COLOR="0;31"
[2025-10-12 10:26:27] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 10:26:27] HOME_URL="https://www.centos.org/"
[2025-10-12 10:26:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 10:26:27] 
[2025-10-12 10:26:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 10:26:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 10:26:27] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 10:26:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 10:26:27] 
[2025-10-12 10:26:27] 2025-10-12 16:25:33,772 | INFO     | ***************************************
[2025-10-12 10:26:27] 2025-10-12 16:25:34,274 | INFO     | executing command: df -mP /var/lib/boinc3/slots/0
[2025-10-12 10:26:27] 2025-10-12 16:25:34,290 | INFO     | sufficient remaining disk space (377023889408 B)
[2025-10-12 10:26:27] 2025-10-12 16:25:34,290 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 10:26:27] 2025-10-12 16:25:34,290 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 10:26:27] 2025-10-12 16:25:34,290 | INFO     | update_server=False
[2025-10-12 10:26:27] 2025-10-12 16:25:34,290 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 10:26:27] 2025-10-12 16:25:34,291 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 10:26:27] 2025-10-12 16:25:34,291 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 10:26:27] 2025-10-12 16:25:34,291 | INFO     | aborting loop
[2025-10-12 10:26:27] 2025-10-12 16:25:34,382 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 10:26:27] 2025-10-12 16:25:34,810 | INFO     | all payload control threads have been joined
[2025-10-12 10:26:27] 2025-10-12 16:25:35,109 | INFO     | all data control threads have been joined
[2025-10-12 10:26:27] 2025-10-12 16:25:35,291 | INFO     | [job] queue monitor thread has finished
[2025-10-12 10:26:27] 2025-10-12 16:25:35,292 | INFO     | [job] retrieve thread has finished
[2025-10-12 10:26:27] 2025-10-12 16:25:35,295 | INFO     | [job] job monitor thread has finished
[2025-10-12 10:26:27] 2025-10-12 16:25:35,611 | INFO     | all job control threads have been joined
[2025-10-12 10:26:27] 2025-10-12 16:25:35,812 | INFO     | [payload] control thread has finished
[2025-10-12 10:26:27] 2025-10-12 16:25:36,050 | INFO     | [payload] failed_post thread has finished
[2025-10-12 10:26:27] 2025-10-12 16:25:36,114 | INFO     | [data] control thread has finished
[2025-10-12 10:26:27] 2025-10-12 16:25:36,388 | INFO     | [data] copytool_out thread has finished
[2025-10-12 10:26:27] 2025-10-12 16:25:36,397 | INFO     | [payload] validate_post thread has finished
[2025-10-12 10:26:27] 2025-10-12 16:25:36,575 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 10:26:27] 2025-10-12 16:25:36,603 | INFO     | [job] validate thread has finished
[2025-10-12 10:26:27] 2025-10-12 16:25:36,616 | INFO     | [job] control thread has finished
[2025-10-12 10:26:27] 2025-10-12 16:25:36,708 | INFO     | [data] copytool_in thread has finished
[2025-10-12 10:26:27] 2025-10-12 16:25:36,728 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 10:26:27] 2025-10-12 16:25:36,774 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 10:26:27] 2025-10-12 16:25:37,776 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 10:26:27] 2025-10-12 16:25:41,781 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 10:26:27] 2025-10-12 16:25:45,236 | INFO     | job.realtimelogging is not enabled
[2025-10-12 10:26:27] 2025-10-12 16:25:46,242 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 10:26:27] 2025-10-12 16:26:05,088 | INFO     | PID=491815 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-12 10:26:27] 2025-10-12 16:26:05,088 | INFO     | .. there are 7 such processes running
[2025-10-12 10:26:27] 2025-10-12 16:26:05,089 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 10:26:27] 2025-10-12 16:26:05,089 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 10:26:27] 2025-10-12 16:26:05,089 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 10:26:27] 2025-10-12 16:26:19,817 | INFO     | [monitor] cgroup control has ended
[2025-10-12 10:26:27] 2025-10-12 16:26:21,924 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 134379798439744)>', '<ExcThread(monitor, started 134379149960960)>']
[2025-10-12 10:26:27] 2025-10-12 16:26:22,176 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 10:26:27] 2025-10-12 16:26:22,176 | INFO     | [monitor] control thread has ended
[2025-10-12 10:26:27] 2025-10-12 16:26:26,950 | INFO     | all workflow threads have been joined
[2025-10-12 10:26:27] 2025-10-12 16:26:26,950 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 10:26:27] 2025-10-12 16:26:26,950 | INFO     | traces error code: 0
[2025-10-12 10:26:27] 2025-10-12 16:26:26,950 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 10:26:27] 2025-10-12 16:26:27,084 [wrapper] ==== pilot stdout END ====
[2025-10-12 10:26:27] 2025-10-12 16:26:27,087 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 10:26:27] 2025-10-12 16:26:27,090 [wrapper] pilotpid: 491815
[2025-10-12 10:26:27] 2025-10-12 16:26:27,093 [wrapper] Pilot exit status: 0
[2025-10-12 10:26:27] 2025-10-12 16:26:27,103 [wrapper] pandaids: 6839658280
[2025-10-12 10:26:27] 2025-10-12 16:26:27,148 [wrapper] cleanup supervisor_pilot  643466 491816
[2025-10-12 10:26:27] 2025-10-12 16:26:27,151 [wrapper] Test setup, not cleaning
[2025-10-12 10:26:27] 2025-10-12 16:26:27,153 [wrapper] apfmon messages muted
[2025-10-12 10:26:27] 2025-10-12 16:26:27,155 [wrapper] ==== wrapper stdout END ====
[2025-10-12 10:26:27] 2025-10-12 16:26:27,157 [wrapper] ==== wrapper stderr END ====
[2025-10-12 10:26:27]  *** Error codes and diagnostics ***
[2025-10-12 10:26:27]     "exeErrorCode": 0,
[2025-10-12 10:26:27]     "exeErrorDiag": "",
[2025-10-12 10:26:27]     "pilotErrorCode": 0,
[2025-10-12 10:26:27]     "pilotErrorDiag": "",
[2025-10-12 10:26:27]  *** Listing of results directory ***
[2025-10-12 10:26:27] total 416976
[2025-10-12 10:26:27] -rw-r--r-- 1 boinc boinc    557409 Oct 12 00:54 pilot3.tar.gz
[2025-10-12 10:26:27] -rwx------ 1 boinc boinc     36292 Oct 12 01:17 runpilot2-wrapper.sh
[2025-10-12 10:26:27] -rw-r--r-- 1 boinc boinc      5112 Oct 12 01:17 queuedata.json
[2025-10-12 10:26:27] -rw-rw-r-- 1 boinc boinc       100 Oct 12 08:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 10:26:27] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 08:31 run_atlas
[2025-10-12 10:26:27] -rw-rw-r-- 1 boinc boinc       105 Oct 12 08:31 job.xml
[2025-10-12 10:26:27] -rw-r--r-- 2 boinc boinc 222575902 Oct 12 08:32 EVNT.46676267._003496.pool.root.1
[2025-10-12 10:26:27] -rw-rw-r-- 1 boinc boinc      9753 Oct 12 08:32 init_data.xml
[2025-10-12 10:26:27] -rw-r--r-- 2 boinc boinc     15120 Oct 12 08:32 start_atlas.sh
[2025-10-12 10:26:27] drwxrwx--x 2 boinc boinc      4096 Oct 12 08:32 shared
[2025-10-12 10:26:27] -rw-r--r-- 2 boinc boinc    569678 Oct 12 08:32 input.tar.gz
[2025-10-12 10:26:27] -rw-rw-r-- 1 boinc boinc         0 Oct 12 08:32 boinc_lockfile
[2025-10-12 10:26:27] -rw-rw-r-- 1 boinc boinc      2550 Oct 12 08:32 pandaJob.out
[2025-10-12 10:26:27] -rw------- 1 boinc boinc    975528 Oct 12 08:32 agis_schedconf.cvmfs.json
[2025-10-12 10:26:27] -rw------- 1 boinc boinc   1560580 Oct 12 08:32 agis_ddmendpoints.agis.ALL.json
[2025-10-12 10:26:27] drwx------ 5 boinc boinc      4096 Oct 12 08:32 pilot3
[2025-10-12 10:26:27] -rw------- 1 boinc boinc 197892361 Oct 12 10:25 HITS.46676269._073437.pool.root.1
[2025-10-12 10:26:27] -rw-rw-r-- 1 boinc boinc       529 Oct 12 10:25 boinc_task_state.xml
[2025-10-12 10:26:27] -rw------- 1 boinc boinc      1024 Oct 12 10:25 memory_monitor_summary.json
[2025-10-12 10:26:27] -rw------- 1 boinc boinc    313348 Oct 12 10:25 log.46676269._073437.job.log.tgz.1
[2025-10-12 10:26:27] -rw------- 1 boinc boinc      7780 Oct 12 10:25 heartbeat.json
[2025-10-12 10:26:27] -rw------- 1 boinc boinc        95 Oct 12 10:26 pilot_heartbeat.json
[2025-10-12 10:26:27] -rw-rw-r-- 1 boinc boinc      8192 Oct 12 10:26 boinc_mmap_file
[2025-10-12 10:26:27] -rw-rw-r-- 1 boinc boinc        27 Oct 12 10:26 wrapper_checkpoint.txt
[2025-10-12 10:26:27] -rw------- 1 boinc boinc      4896 Oct 12 10:26 pilotlog.txt
[2025-10-12 10:26:27] -rw------- 1 boinc boinc    990268 Oct 12 10:26 log.46676269._073437.job.log.1
[2025-10-12 10:26:27] -rw------- 1 boinc boinc       357 Oct 12 10:26 output.list
[2025-10-12 10:26:27] -rw-rw-r-- 1 boinc boinc       620 Oct 12 10:26 runtime_log
[2025-10-12 10:26:27] -rw------- 1 boinc boinc   1320960 Oct 12 10:26 result.tar.gz
[2025-10-12 10:26:27] -rw-rw-r-- 1 boinc boinc      8755 Oct 12 10:26 runtime_log.err
[2025-10-12 10:26:27] -rw------- 1 boinc boinc       657 Oct 12 10:26 29BNDmmV5R8n9Rq4apOajLDm4fhM0noT9bVof3QYDmnQTMDmnozAXm.diag
[2025-10-12 10:26:27] -rw-rw-r-- 1 boinc boinc     21136 Oct 12 10:26 stderr.txt
[2025-10-12 10:26:27] HITS file was successfully produced:
[2025-10-12 10:26:27] -rw------- 1 boinc boinc 197892361 Oct 12 10:25 shared/HITS.pool.root.1
[2025-10-12 10:26:27]  *** Contents of shared directory: ***
[2025-10-12 10:26:27] total 412492
[2025-10-12 10:26:27] -rw-r--r-- 2 boinc boinc 222575902 Oct 12 08:32 ATLAS.root_0
[2025-10-12 10:26:27] -rw-r--r-- 2 boinc boinc     15120 Oct 12 08:32 start_atlas.sh
[2025-10-12 10:26:27] -rw-r--r-- 2 boinc boinc    569678 Oct 12 08:32 input.tar.gz
[2025-10-12 10:26:27] -rw------- 1 boinc boinc 197892361 Oct 12 10:25 HITS.pool.root.1
[2025-10-12 10:26:27] -rw------- 1 boinc boinc   1320960 Oct 12 10:26 result.tar.gz
10:26:29 (487978): run_atlas exited; CPU time 26142.015116
10:26:29 (487978): called boinc_finish(0)

</stderr_txt>
]]>

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