Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
07:22:33 (1244769): wrapper (7.7.26015): starting
07:22:33 (1244769): wrapper: running run_atlas (--nthreads 4)
[2025-10-13 07:22:33] Arguments: --nthreads 4
[2025-10-13 07:22:33] Threads: 4
[2025-10-13 07:22:33] Checking for CVMFS
[2025-10-13 07:22:33] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 07:22:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 07:22:33] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 07:22:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 07:22:33] 2.9.2.0 3649848 5167 98792 151650 2 56 22821963 36864000 0 130560 0 4645555 99.992 185251 885 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-13 07:22:33] CVMFS is ok
[2025-10-13 07:22:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 07:22:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 07:22:33] Further information can be found at the LHC@home message board.
[2025-10-13 07:22:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 07:22:33] Checking for apptainer binary...
[2025-10-13 07:22:33] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 07:22:33] Running /usr/bin/apptainer --version
[2025-10-13 07:22:33] apptainer version 1.4.1-1.1
[2025-10-13 07:22:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 07:22:33] thA352
[2025-10-13 07:22:33] apptainer works
[2025-10-13 07:22:33] Set ATHENA_PROC_NUMBER=4
[2025-10-13 07:22:33] Set ATHENA_CORE_NUMBER=4
[2025-10-13 07:22:33] Starting ATLAS job with PandaID=6839989691
[2025-10-13 07:22:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 08:34:59]  *** The last 200 lines of the pilot log: ***
[2025-10-13 08:34:59]  lfn=log.46676269._079023.job.log.tgz.1
[2025-10-13 08:34:59]  mtime=0
[2025-10-13 08:34:59]  protocol_id=None
[2025-10-13 08:34:59]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-13 08:34:59]  replicas=None
[2025-10-13 08:34:59]  scope=mc23_13p6TeV
[2025-10-13 08:34:59]  status=None
[2025-10-13 08:34:59]  status_code=0
[2025-10-13 08:34:59]  storage_token=
[2025-10-13 08:34:59]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6839989691/log.46676269._079023.job.log.tgz.1
[2025-10-13 08:34:59]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7a/66/log.46676269._079023.job.log.tgz.1
[2025-10-13 08:34:59]  workdir=None
[2025-10-13 08:34:59] ]
[2025-10-13 08:34:59] 2025-10-13 06:34:21,159 | INFO     | transferring file log.46676269._079023.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6839989691/log.46676269._079023.job.log.tgz.1 to /local/data/boinc/
[2025-10-13 08:34:59] 2025-10-13 06:34:21,160 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6839989691/log.46676269._079023.job.log.tgz.1 /local/data/boinc/slots/0/log.46676269._0790
[2025-10-13 08:34:59] 2025-10-13 06:34:21,179 | INFO     | adding to output.list: log.46676269._079023.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7a/66/log.46676269._079023.job.log.tg
[2025-10-13 08:34:59] 2025-10-13 06:34:21,179 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-13 08:34:59] 2025-10-13 06:34:21,180 | INFO     | summary of transferred files:
[2025-10-13 08:34:59] 2025-10-13 06:34:21,180 | INFO     |  -- lfn=log.46676269._079023.job.log.tgz.1, status_code=0, status=transferred
[2025-10-13 08:34:59] 2025-10-13 06:34:21,180 | INFO     | stage-out finished correctly
[2025-10-13 08:34:59] 2025-10-13 06:34:21,220 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-13 08:34:59] 2025-10-13 06:34:21,760 | INFO     | time since job start (4299s) is within the limit (172800.0s)
[2025-10-13 08:34:59] 2025-10-13 06:34:22,183 | INFO     | monitor loop #331: job 0:6839989691 is in state 'finished'
[2025-10-13 08:34:59] 2025-10-13 06:34:22,183 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 08:34:59] 2025-10-13 06:34:22,578 | INFO     | job 6839989691 has state=finished
[2025-10-13 08:34:59] 2025-10-13 06:34:22,579 | INFO     | preparing for final server update for job 6839989691 in state='finished'
[2025-10-13 08:34:59] 2025-10-13 06:34:22,579 | INFO     | this job has now completed (state=finished)
[2025-10-13 08:34:59] 2025-10-13 06:34:22,579 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 08:34:59] 2025-10-13 06:34:22,579 | INFO     | log transfer has been attempted: DONE
[2025-10-13 08:34:59] 2025-10-13 06:34:22,579 | INFO     | job 6839989691 has finished - writing final server update
[2025-10-13 08:34:59] 2025-10-13 06:34:22,579 | INFO     | total number of processed events: 400 (read)
[2025-10-13 08:34:59] 2025-10-13 06:34:22,580 | INFO     | executing command: lscpu
[2025-10-13 08:34:59] 2025-10-13 06:34:22,601 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 08:34:59] 2025-10-13 06:34:23,766 | INFO     | time since job start (4301s) is within the limit (172800.0s)
[2025-10-13 08:34:59] 2025-10-13 06:34:24,686 | INFO     | monitor loop #332: job 0:6839989691 is in state 'finished'
[2025-10-13 08:34:59] 2025-10-13 06:34:24,686 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 08:34:59] 2025-10-13 06:34:25,772 | INFO     | time since job start (4303s) is within the limit (172800.0s)
[2025-10-13 08:34:59] 2025-10-13 06:34:26,024 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-13 08:34:59] 2025-10-13 06:34:26,026 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3405.275625
[2025-10-13 08:34:59] 2025-10-13 06:34:26,027 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6839989691/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 08:34:59] 2025-10-13 06:34:26,028 | INFO     | extracted standard info from prmon json
[2025-10-13 08:34:59] 2025-10-13 06:34:26,028 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 08:34:59] 2025-10-13 06:34:26,028 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 08:34:59] 2025-10-13 06:34:26,028 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 08:34:59] 2025-10-13 06:34:26,028 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 08:34:59] 2025-10-13 06:34:26,029 | INFO     | fitting pss+swap vs Time
[2025-10-13 08:34:59] 2025-10-13 06:34:26,029 | INFO     | sum of square deviations: 81266640.0
[2025-10-13 08:34:59] 2025-10-13 06:34:26,029 | INFO     | sum of deviations: -3957818897.0
[2025-10-13 08:34:59] 2025-10-13 06:34:26,029 | INFO     | mean x: 1760335211.5
[2025-10-13 08:34:59] 2025-10-13 06:34:26,029 | INFO     | mean y: 2739203.03125
[2025-10-13 08:34:59] 2025-10-13 06:34:26,029 | INFO     | -- intersect: 85733956405.18445
[2025-10-13 08:34:59] 2025-10-13 06:34:26,029 | INFO     | intersect: 85733956405.18445
[2025-10-13 08:34:59] 2025-10-13 06:34:26,029 | INFO     | chi2: 0.012681044288279488
[2025-10-13 08:34:59] 2025-10-13 06:34:26,029 | INFO     | -- intersect: 85733956405.18445
[2025-10-13 08:34:59] 2025-10-13 06:34:26,029 | INFO     | current memory leak: -48.70 B/s (using 64 data points, chi2=0.01)
[2025-10-13 08:34:59] 2025-10-13 06:34:26,029 | INFO     | could have reported an average CPU frequency of 3614 MHz (6 samples)
[2025-10-13 08:34:59] 2025-10-13 06:34:26,029 | INFO     | ..............................
[2025-10-13 08:34:59] 2025-10-13 06:34:26,029 | INFO     | . Timing measurements:
[2025-10-13 08:34:59] 2025-10-13 06:34:26,029 | INFO     | . get job = 0 s
[2025-10-13 08:34:59] 2025-10-13 06:34:26,029 | INFO     | . initial setup = 1 s
[2025-10-13 08:34:59] 2025-10-13 06:34:26,029 | INFO     | . payload setup = 4 s
[2025-10-13 08:34:59] 2025-10-13 06:34:26,029 | INFO     | . stage-in = 0 s
[2025-10-13 08:34:59] 2025-10-13 06:34:26,029 | INFO     | . payload execution = 4276 s
[2025-10-13 08:34:59] 2025-10-13 06:34:26,029 | INFO     | . stage-out = 0 s
[2025-10-13 08:34:59] 2025-10-13 06:34:26,029 | INFO     | . log creation = 0 s
[2025-10-13 08:34:59] 2025-10-13 06:34:26,030 | INFO     | ..............................
[2025-10-13 08:34:59] 2025-10-13 06:34:26,281 | INFO     | 
[2025-10-13 08:34:59] 2025-10-13 06:34:26,281 | INFO     | job summary report
[2025-10-13 08:34:59] 2025-10-13 06:34:26,281 | INFO     | --------------------------------------------------
[2025-10-13 08:34:59] 2025-10-13 06:34:26,281 | INFO     | PanDA job id: 6839989691
[2025-10-13 08:34:59] 2025-10-13 06:34:26,281 | INFO     | task id: 46676269
[2025-10-13 08:34:59] 2025-10-13 06:34:26,281 | INFO     | errors: (none)
[2025-10-13 08:34:59] 2025-10-13 06:34:26,281 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 08:34:59] 2025-10-13 06:34:26,281 | INFO     | pilot state: finished 
[2025-10-13 08:34:59] 2025-10-13 06:34:26,281 | INFO     | transexitcode: 0
[2025-10-13 08:34:59] 2025-10-13 06:34:26,281 | INFO     | exeerrorcode: 0
[2025-10-13 08:34:59] 2025-10-13 06:34:26,281 | INFO     | exeerrordiag: 
[2025-10-13 08:34:59] 2025-10-13 06:34:26,282 | INFO     | exitcode: 0
[2025-10-13 08:34:59] 2025-10-13 06:34:26,282 | INFO     | exitmsg: OK
[2025-10-13 08:34:59] 2025-10-13 06:34:26,282 | INFO     | cpuconsumptiontime: 16241 s
[2025-10-13 08:34:59] 2025-10-13 06:34:26,282 | INFO     | nevents: 400
[2025-10-13 08:34:59] 2025-10-13 06:34:26,282 | INFO     | neventsw: 0
[2025-10-13 08:34:59] 2025-10-13 06:34:26,282 | INFO     | pid: 1255138
[2025-10-13 08:34:59] 2025-10-13 06:34:26,282 | INFO     | pgrp: 1255138
[2025-10-13 08:34:59] 2025-10-13 06:34:26,282 | INFO     | corecount: 4
[2025-10-13 08:34:59] 2025-10-13 06:34:26,282 | INFO     | event service: False
[2025-10-13 08:34:59] 2025-10-13 06:34:26,282 | INFO     | sizes: {0: 2348860, 4: 2349122, 11: 2349150, 4284: 2375370, 4285: 2384430, 4290: 2384568}
[2025-10-13 08:34:59] 2025-10-13 06:34:26,282 | INFO     | --------------------------------------------------
[2025-10-13 08:34:59] 2025-10-13 06:34:26,282 | INFO     | 
[2025-10-13 08:34:59] 2025-10-13 06:34:26,282 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-10-13 08:34:59] 2025-10-13 06:34:26,304 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 08:34:59] 2025-10-13 06:34:26,304 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 08:34:59] 2025-10-13 06:34:26,304 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 08:34:59] 2025-10-13 06:34:26,304 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 08:34:59] 2025-10-13 06:34:26,304 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 08:34:59] 2025-10-13 06:34:26,304 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 08:34:59] 2025-10-13 06:34:26,304 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 08:34:59] 2025-10-13 06:34:26,304 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 08:34:59] 2025-10-13 06:34:26,304 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 08:34:59] 2025-10-13 06:34:26,304 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 08:34:59] 2025-10-13 06:34:26,304 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 08:34:59] 2025-10-13 06:34:26,304 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 08:34:59] 2025-10-13 06:34:26,304 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 08:34:59] 2025-10-13 06:34:26,304 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 08:34:59] 2025-10-13 06:34:26,304 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 08:34:59] 2025-10-13 06:34:26,304 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 08:34:59] 2025-10-13 06:34:26,304 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 08:34:59] 2025-10-13 06:34:26,305 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 08:34:59] 2025-10-13 06:34:26,305 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 08:34:59] 2025-10-13 06:34:26,305 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 08:34:59] 2025-10-13 06:34:26,305 | INFO     | job 6839989691 has completed (purged errors)
[2025-10-13 08:34:59] 2025-10-13 06:34:26,305 | INFO     | overall cleanup function is called
[2025-10-13 08:34:59] 2025-10-13 06:34:27,311 | INFO     | --- collectZombieJob: --- 10, [1255138]
[2025-10-13 08:34:59] 2025-10-13 06:34:27,311 | INFO     | zombie collector waiting for pid 1255138
[2025-10-13 08:34:59] 2025-10-13 06:34:27,311 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 08:34:59] 2025-10-13 06:34:27,311 | INFO     | collected zombie processes
[2025-10-13 08:34:59] 2025-10-13 06:34:27,312 | INFO     | will attempt to kill all subprocesses of pid=1255138
[2025-10-13 08:34:59] 2025-10-13 06:34:27,355 | INFO     | process IDs to be killed: [1255138] (in reverse order)
[2025-10-13 08:34:59] 2025-10-13 06:34:27,388 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 08:34:59] 2025-10-13 06:34:27,388 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 08:34:59] 2025-10-13 06:34:27,390 | INFO     | did not find any defunct processes belonging to 1255138
[2025-10-13 08:34:59] 2025-10-13 06:34:27,391 | INFO     | did not find any defunct processes belonging to 1255138
[2025-10-13 08:34:59] 2025-10-13 06:34:27,391 | INFO     | ready for new job
[2025-10-13 08:34:59] 2025-10-13 06:34:27,391 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 08:34:59] 2025-10-13 06:34:27,392 | INFO     | ***************************************
[2025-10-13 08:34:59] 2025-10-13 06:34:27,392 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 08:34:59] 2025-10-13 06:34:27,392 | INFO     | ***************************************
[2025-10-13 08:34:59] 2025-10-13 06:34:27,392 | INFO     | 
[2025-10-13 08:34:59] 2025-10-13 06:34:27,393 | INFO     | architecture information:
[2025-10-13 08:34:59] 2025-10-13 06:34:27,393 | INFO     | executing command: cat /etc/os-release
[2025-10-13 08:34:59] 2025-10-13 06:34:27,407 | INFO     | cat /etc/os-release:
[2025-10-13 08:34:59] NAME="CentOS Linux"
[2025-10-13 08:34:59] VERSION="7 (Core)"
[2025-10-13 08:34:59] ID="centos"
[2025-10-13 08:34:59] ID_LIKE="rhel fedora"
[2025-10-13 08:34:59] VERSION_ID="7"
[2025-10-13 08:34:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 08:34:59] ANSI_COLOR="0;31"
[2025-10-13 08:34:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 08:34:59] HOME_URL="https://www.centos.org/"
[2025-10-13 08:34:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 08:34:59] 
[2025-10-13 08:34:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 08:34:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 08:34:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 08:34:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 08:34:59] 
[2025-10-13 08:34:59] 2025-10-13 06:34:27,407 | INFO     | ***************************************
[2025-10-13 08:34:59] 2025-10-13 06:34:27,910 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-13 08:34:59] 2025-10-13 06:34:27,928 | INFO     | sufficient remaining disk space (235736662016 B)
[2025-10-13 08:34:59] 2025-10-13 06:34:27,929 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 08:34:59] 2025-10-13 06:34:27,929 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 08:34:59] 2025-10-13 06:34:27,929 | INFO     | update_server=False
[2025-10-13 08:34:59] 2025-10-13 06:34:27,929 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 08:34:59] 2025-10-13 06:34:27,929 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 08:34:59] 2025-10-13 06:34:27,929 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 08:34:59] 2025-10-13 06:34:28,002 | INFO     | all data control threads have been joined
[2025-10-13 08:34:59] 2025-10-13 06:34:28,195 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 08:34:59] 2025-10-13 06:34:28,195 | INFO     | aborting loop
[2025-10-13 08:34:59] 2025-10-13 06:34:28,934 | INFO     | [job] retrieve thread has finished
[2025-10-13 08:34:59] 2025-10-13 06:34:28,935 | INFO     | [job] queue monitor thread has finished
[2025-10-13 08:34:59] 2025-10-13 06:34:28,935 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 08:34:59] 2025-10-13 06:34:28,938 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 08:34:59] 2025-10-13 06:34:29,007 | INFO     | [data] control thread has finished
[2025-10-13 08:34:59] 2025-10-13 06:34:29,201 | INFO     | [job] job monitor thread has finished
[2025-10-13 08:34:59] 2025-10-13 06:34:29,234 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 08:34:59] 2025-10-13 06:34:29,298 | INFO     | [payload] failed_post thread has finished
[2025-10-13 08:34:59] 2025-10-13 06:34:29,397 | INFO     | all payload control threads have been joined
[2025-10-13 08:34:59] 2025-10-13 06:34:29,499 | INFO     | [data] copytool_in thread has finished
[2025-10-13 08:34:59] 2025-10-13 06:34:29,499 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 08:34:59] 2025-10-13 06:34:29,565 | INFO     | all job control threads have been joined
[2025-10-13 08:34:59] 2025-10-13 06:34:29,781 | INFO     | [payload] validate_post thread has finished
[2025-10-13 08:34:59] 2025-10-13 06:34:30,339 | INFO     | [job] validate thread has finished
[2025-10-13 08:34:59] 2025-10-13 06:34:30,357 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 08:34:59] 2025-10-13 06:34:30,403 | INFO     | [payload] control thread has finished
[2025-10-13 08:34:59] 2025-10-13 06:34:30,571 | INFO     | [job] control thread has finished
[2025-10-13 08:34:59] 2025-10-13 06:34:31,240 | INFO     | [data] copytool_out thread has finished
[2025-10-13 08:34:59] 2025-10-13 06:34:31,936 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 08:34:59] 2025-10-13 06:34:48,033 | INFO     | [monitor] cgroup control has ended
[2025-10-13 08:34:59] 2025-10-13 06:34:49,270 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140119981287232)>', '<ExcThread(monitor, started 140118602016512)>']
[2025-10-13 08:34:59] 2025-10-13 06:34:54,295 | INFO     | all workflow threads have been joined
[2025-10-13 08:34:59] 2025-10-13 06:34:54,296 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 08:34:59] 2025-10-13 06:34:54,296 | INFO     | traces error code: 0
[2025-10-13 08:34:59] 2025-10-13 06:34:54,296 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 08:34:59] 2025-10-13 06:34:58,896 | INFO     | PID=1248555 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 08:34:59] 2025-10-13 06:34:58,897 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 08:34:59] 2025-10-13 06:34:58,897 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 08:34:59] 2025-10-13 06:34:58,897 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 08:34:59] 2025-10-13 06:34:58,897 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 08:34:59] 2025-10-13 06:34:58,897 | INFO     | [monitor] control thread has ended
[2025-10-13 08:34:59] 2025-10-13 06:34:58,971 [wrapper] ==== pilot stdout END ====
[2025-10-13 08:34:59] 2025-10-13 06:34:58,975 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 08:34:59] 2025-10-13 06:34:58,979 [wrapper] pilotpid: 1248555
[2025-10-13 08:34:59] 2025-10-13 06:34:58,984 [wrapper] Pilot exit status: 0
[2025-10-13 08:34:59] 2025-10-13 06:34:58,996 [wrapper] pandaids: 6839989691
[2025-10-13 08:34:59] 2025-10-13 06:34:59,018 [wrapper] cleanup supervisor_pilot 1264857 1248556
[2025-10-13 08:34:59] 2025-10-13 06:34:59,022 [wrapper] Test setup, not cleaning
[2025-10-13 08:34:59] 2025-10-13 06:34:59,026 [wrapper] apfmon messages muted
[2025-10-13 08:34:59] 2025-10-13 06:34:59,029 [wrapper] ==== wrapper stdout END ====
[2025-10-13 08:34:59] 2025-10-13 06:34:59,034 [wrapper] ==== wrapper stderr END ====
[2025-10-13 08:34:59]  *** Error codes and diagnostics ***
[2025-10-13 08:34:59]     "exeErrorCode": 0,
[2025-10-13 08:34:59]     "exeErrorDiag": "",
[2025-10-13 08:34:59]     "pilotErrorCode": 0,
[2025-10-13 08:34:59]     "pilotErrorDiag": "",
[2025-10-13 08:34:59]  *** Listing of results directory ***
[2025-10-13 08:34:59] total 411112
[2025-10-13 08:34:59] -rw-r--r-- 1 boinc boinc    557409 Oct 12 14:35 pilot3.tar.gz
[2025-10-13 08:34:59] -rw-r--r-- 1 boinc boinc      5112 Oct 12 14:59 queuedata.json
[2025-10-13 08:34:59] -rwx------ 1 boinc boinc     36292 Oct 12 15:00 runpilot2-wrapper.sh
[2025-10-13 08:34:59] -rw-r--r-- 1 boinc boinc       100 Oct 13 07:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 08:34:59] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 07:22 run_atlas
[2025-10-13 08:34:59] -rw-r--r-- 1 boinc boinc       105 Oct 13 07:22 job.xml
[2025-10-13 08:34:59] -rw-r--r-- 2 boinc boinc 221739375 Oct 13 07:22 EVNT.46676267._003845.pool.root.1
[2025-10-13 08:34:59] -rw-r--r-- 2 boinc boinc    569685 Oct 13 07:22 input.tar.gz
[2025-10-13 08:34:59] -rw-r--r-- 2 boinc boinc     15120 Oct 13 07:22 start_atlas.sh
[2025-10-13 08:34:59] drwxrwx--x 2 boinc boinc      4096 Oct 13 07:22 shared
[2025-10-13 08:34:59] -rw-r--r-- 1 boinc boinc         0 Oct 13 07:22 boinc_setup_complete
[2025-10-13 08:34:59] -rw-r--r-- 1 boinc boinc      6371 Oct 13 07:22 init_data.xml
[2025-10-13 08:34:59] -rw-r--r-- 1 boinc boinc         0 Oct 13 07:22 boinc_lockfile
[2025-10-13 08:34:59] -rw-r--r-- 1 boinc boinc      2550 Oct 13 07:22 pandaJob.out
[2025-10-13 08:34:59] -rw------- 1 boinc boinc    973230 Oct 13 07:22 agis_schedconf.cvmfs.json
[2025-10-13 08:34:59] -rw------- 1 boinc boinc   1560580 Oct 13 07:22 agis_ddmendpoints.agis.ALL.json
[2025-10-13 08:34:59] drwx------ 5 boinc boinc      4096 Oct 13 07:22 pilot3
[2025-10-13 08:34:59] -rw------- 1 boinc boinc 193535627 Oct 13 08:34 HITS.46676269._079023.pool.root.1
[2025-10-13 08:34:59] -rw------- 1 boinc boinc        95 Oct 13 08:34 pilot_heartbeat.json
[2025-10-13 08:34:59] -rw-r--r-- 1 boinc boinc       529 Oct 13 08:34 boinc_task_state.xml
[2025-10-13 08:34:59] -rw------- 1 boinc boinc      1039 Oct 13 08:34 memory_monitor_summary.json
[2025-10-13 08:34:59] -rw------- 1 boinc boinc    266689 Oct 13 08:34 log.46676269._079023.job.log.tgz.1
[2025-10-13 08:34:59] -rw------- 1 boinc boinc      7765 Oct 13 08:34 heartbeat.json
[2025-10-13 08:34:59] -rw-r--r-- 1 boinc boinc      8192 Oct 13 08:34 boinc_mmap_file
[2025-10-13 08:34:59] -rw-r--r-- 1 boinc boinc        27 Oct 13 08:34 wrapper_checkpoint.txt
[2025-10-13 08:34:59] -rw------- 1 boinc boinc       747 Oct 13 08:34 pilotlog.txt
[2025-10-13 08:34:59] -rw------- 1 boinc boinc    638874 Oct 13 08:34 log.46676269._079023.job.log.1
[2025-10-13 08:34:59] -rw------- 1 boinc boinc       357 Oct 13 08:34 output.list
[2025-10-13 08:34:59] -rw-r--r-- 1 boinc boinc       620 Oct 13 08:34 runtime_log
[2025-10-13 08:34:59] -rw------- 1 boinc boinc    921600 Oct 13 08:34 result.tar.gz
[2025-10-13 08:34:59] -rw------- 1 boinc boinc       658 Oct 13 08:34 wnNKDm0rAS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmQxTMDmONeASn.diag
[2025-10-13 08:34:59] -rw-r--r-- 1 boinc boinc      8777 Oct 13 08:34 runtime_log.err
[2025-10-13 08:34:59] -rw-r--r-- 1 boinc boinc     21609 Oct 13 08:34 stderr.txt
[2025-10-13 08:34:59] HITS file was successfully produced:
[2025-10-13 08:34:59] -rw------- 1 boinc boinc 193535627 Oct 13 08:34 shared/HITS.pool.root.1
[2025-10-13 08:34:59]  *** Contents of shared directory: ***
[2025-10-13 08:34:59] total 407028
[2025-10-13 08:34:59] -rw-r--r-- 2 boinc boinc 221739375 Oct 13 07:22 ATLAS.root_0
[2025-10-13 08:34:59] -rw-r--r-- 2 boinc boinc    569685 Oct 13 07:22 input.tar.gz
[2025-10-13 08:34:59] -rw-r--r-- 2 boinc boinc     15120 Oct 13 07:22 start_atlas.sh
[2025-10-13 08:34:59] -rw------- 1 boinc boinc 193535627 Oct 13 08:34 HITS.pool.root.1
[2025-10-13 08:34:59] -rw------- 1 boinc boinc    921600 Oct 13 08:34 result.tar.gz
08:35:00 (1244769): run_atlas exited; CPU time 16250.381266
08:35:00 (1244769): called boinc_finish(0)

</stderr_txt>
]]>

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