Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:22:59 (1415): wrapper (7.7.26015): starting
16:22:59 (1415): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 16:22:59] Arguments: --nthreads 8
[2025-10-12 16:22:59] Threads: 8
[2025-10-12 16:22:59] Checking for CVMFS
[2025-10-12 16:23:00] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 16:23:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 16:23:02] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 16:23:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 16:23:04] 2.11.2.0 9407 220511 139924 151623 1 11 24692292 25165824 4632 130560 0 103522905 99.861 63570366 3084 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-10-12 16:23:04] CVMFS is ok
[2025-10-12 16:23:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 16:23:04] Checking for apptainer binary...
[2025-10-12 16:23:04] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 16:23:04] Running /usr/bin/apptainer --version
[2025-10-12 16:23:04] apptainer version 1.3.2-1.el7
[2025-10-12 16:23:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 16:23:26] cg-vwn416.simple-grid.lan
[2025-10-12 16:23:26] apptainer works
[2025-10-12 16:23:26] Set ATHENA_PROC_NUMBER=8
[2025-10-12 16:23:26] Set ATHENA_CORE_NUMBER=8
[2025-10-12 16:23:26] Starting ATLAS job with PandaID=6839866920
[2025-10-12 16:23:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 20:47:16]  *** The last 200 lines of the pilot log: ***
[2025-10-12 20:47:16] 2025-10-12 18:46:39,636 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 20:47:16] 2025-10-12 18:46:39,641 | INFO     | fitting pss+swap vs Time
[2025-10-12 20:47:16] 2025-10-12 18:46:39,642 | INFO     | sum of square deviations: 4560048290.0
[2025-10-12 20:47:16] 2025-10-12 18:46:39,644 | INFO     | sum of deviations: 70703420486.99998
[2025-10-12 20:47:16] 2025-10-12 18:46:39,644 | INFO     | mean x: 1760287188.0
[2025-10-12 20:47:16] 2025-10-12 18:46:39,644 | INFO     | mean y: 2448275.3591836733
[2025-10-12 20:47:16] 2025-10-12 18:46:39,644 | INFO     | -- intersect: -27290755067.240242
[2025-10-12 20:47:16] 2025-10-12 18:46:39,644 | INFO     | intersect: -27290755067.240242
[2025-10-12 20:47:16] 2025-10-12 18:46:39,645 | INFO     | chi2: 6.996404127597966
[2025-10-12 20:47:16] 2025-10-12 18:46:39,645 | INFO     | sum of square deviations: 4286517580.0
[2025-10-12 20:47:16] 2025-10-12 18:46:39,651 | INFO     | sum of deviations: 85538188546.0
[2025-10-12 20:47:16] 2025-10-12 18:46:39,652 | INFO     | mean x: 1760287035.5
[2025-10-12 20:47:16] 2025-10-12 18:46:39,652 | INFO     | mean y: 2456393.7583333333
[2025-10-12 20:47:16] 2025-10-12 18:46:39,652 | INFO     | -- intersect: -35124371276.380005
[2025-10-12 20:47:16] 2025-10-12 18:46:39,652 | INFO     | intersect: -35124371276.380005
[2025-10-12 20:47:16] 2025-10-12 18:46:39,652 | INFO     | chi2: 6.264179575141487
[2025-10-12 20:47:16] 2025-10-12 18:46:39,653 | INFO     | current chi2=6.264179575141487 (change=10.465726952051718 %)
[2025-10-12 20:47:16] 2025-10-12 18:46:39,653 | INFO     | right removable region: 239
[2025-10-12 20:47:16] 2025-10-12 18:46:39,653 | INFO     | sum of square deviations: 4286517580.0
[2025-10-12 20:47:16] 2025-10-12 18:46:39,655 | INFO     | sum of deviations: -14300707355.500006
[2025-10-12 20:47:16] 2025-10-12 18:46:39,655 | INFO     | mean x: 1760287340.5
[2025-10-12 20:47:16] 2025-10-12 18:46:39,655 | INFO     | mean y: 2495629.7291666665
[2025-10-12 20:47:16] 2025-10-12 18:46:39,655 | INFO     | -- intersect: 5875177509.195971
[2025-10-12 20:47:16] 2025-10-12 18:46:39,655 | INFO     | intersect: 5875177509.195971
[2025-10-12 20:47:16] 2025-10-12 18:46:39,656 | INFO     | chi2: 2.1831898457531036
[2025-10-12 20:47:16] 2025-10-12 18:46:39,656 | INFO     | current chi2=2.1831898457531036 (change=68.79554402609037 %)
[2025-10-12 20:47:16] 2025-10-12 18:46:39,656 | INFO     | sum of square deviations: 4024149870.0
[2025-10-12 20:47:16] 2025-10-12 18:46:39,658 | INFO     | sum of deviations: -51117534264.99999
[2025-10-12 20:47:16] 2025-10-12 18:46:39,658 | INFO     | mean x: 1760287493.0
[2025-10-12 20:47:16] 2025-10-12 18:46:39,659 | INFO     | mean y: 2516879.4127659574
[2025-10-12 20:47:16] 2025-10-12 18:46:39,659 | INFO     | -- intersect: 22362905817.829323
[2025-10-12 20:47:16] 2025-10-12 18:46:39,659 | INFO     | intersect: 22362905817.829323
[2025-10-12 20:47:16] 2025-10-12 18:46:39,659 | INFO     | chi2: 1.0009788942404265
[2025-10-12 20:47:16] 2025-10-12 18:46:39,659 | INFO     | current chi2=1.0009788942404265 (change=54.150625233641414 %)
[2025-10-12 20:47:16] 2025-10-12 18:46:39,660 | INFO     | sum of square deviations: 3772712597.5
[2025-10-12 20:47:16] 2025-10-12 18:46:39,662 | INFO     | sum of deviations: -46498743554.49999
[2025-10-12 20:47:16] 2025-10-12 18:46:39,662 | INFO     | mean x: 1760287645.5
[2025-10-12 20:47:16] 2025-10-12 18:46:39,662 | INFO     | mean y: 2514053.9
[2025-10-12 20:47:16] 2025-10-12 18:46:39,662 | INFO     | -- intersect: 21698087648.479675
[2025-10-12 20:47:16] 2025-10-12 18:46:39,662 | INFO     | intersect: 21698087648.479675
[2025-10-12 20:47:16] 2025-10-12 18:46:39,663 | INFO     | chi2: 0.9885019969721469
[2025-10-12 20:47:16] 2025-10-12 18:46:39,663 | INFO     | current chi2=0.9885019969721469 (change=1.2464695649499642 %)
[2025-10-12 20:47:16] 2025-10-12 18:46:39,663 | INFO     | left removable region: 30
[2025-10-12 20:47:16] 2025-10-12 18:46:39,663 | INFO     | sum of square deviations: 2830787960.0
[2025-10-12 20:47:16] 2025-10-12 18:46:39,670 | INFO     | sum of deviations: -6449998906.999999
[2025-10-12 20:47:16] 2025-10-12 18:46:39,671 | INFO     | mean x: 1760287920.0
[2025-10-12 20:47:16] 2025-10-12 18:46:39,671 | INFO     | mean y: 2507602.1435406697
[2025-10-12 20:47:16] 2025-10-12 18:46:39,671 | INFO     | -- intersect: 4013353811.9053283
[2025-10-12 20:47:16] 2025-10-12 18:46:39,671 | INFO     | intersect: 4013353811.9053283
[2025-10-12 20:47:16] 2025-10-12 18:46:39,671 | INFO     | chi2: 0.08144523399023267
[2025-10-12 20:47:16] 2025-10-12 18:46:39,671 | INFO     | -- intersect: 4013353811.9053283
[2025-10-12 20:47:16] 2025-10-12 18:46:39,671 | INFO     | current memory leak: -2.28 B/s (using 209 data points, chi2=0.08)
[2025-10-12 20:47:16] 2025-10-12 18:46:39,672 | INFO     | could have reported an average CPU frequency of 1999 MHz (11 samples)
[2025-10-12 20:47:16] 2025-10-12 18:46:39,672 | INFO     | ..............................
[2025-10-12 20:47:16] 2025-10-12 18:46:39,672 | INFO     | . Timing measurements:
[2025-10-12 20:47:16] 2025-10-12 18:46:39,673 | INFO     | . get job = 0 s
[2025-10-12 20:47:16] 2025-10-12 18:46:39,673 | INFO     | . initial setup = 9 s
[2025-10-12 20:47:16] 2025-10-12 18:46:39,673 | INFO     | . payload setup = 130 s
[2025-10-12 20:47:16] 2025-10-12 18:46:39,673 | INFO     | . stage-in = 0 s
[2025-10-12 20:47:16] 2025-10-12 18:46:39,673 | INFO     | . payload execution = 15108 s
[2025-10-12 20:47:16] 2025-10-12 18:46:39,673 | INFO     | . stage-out = 3 s
[2025-10-12 20:47:16] 2025-10-12 18:46:39,673 | INFO     | . log creation = 1 s
[2025-10-12 20:47:16] 2025-10-12 18:46:39,673 | INFO     | ..............................
[2025-10-12 20:47:16] 2025-10-12 18:46:39,824 | INFO     | time since job start (15543s) is within the limit (172800.0s)
[2025-10-12 20:47:16] 2025-10-12 18:46:39,845 | INFO     | 
[2025-10-12 20:47:16] 2025-10-12 18:46:39,845 | INFO     | job summary report
[2025-10-12 20:47:16] 2025-10-12 18:46:39,846 | INFO     | --------------------------------------------------
[2025-10-12 20:47:16] 2025-10-12 18:46:39,846 | INFO     | PanDA job id: 6839866920
[2025-10-12 20:47:16] 2025-10-12 18:46:39,846 | INFO     | task id: 46676269
[2025-10-12 20:47:16] 2025-10-12 18:46:39,846 | INFO     | errors: (none)
[2025-10-12 20:47:16] 2025-10-12 18:46:39,846 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 20:47:16] 2025-10-12 18:46:39,846 | INFO     | pilot state: finished 
[2025-10-12 20:47:16] 2025-10-12 18:46:39,846 | INFO     | transexitcode: 0
[2025-10-12 20:47:16] 2025-10-12 18:46:39,846 | INFO     | exeerrorcode: 0
[2025-10-12 20:47:16] 2025-10-12 18:46:39,846 | INFO     | exeerrordiag: 
[2025-10-12 20:47:16] 2025-10-12 18:46:39,846 | INFO     | exitcode: 0
[2025-10-12 20:47:16] 2025-10-12 18:46:39,846 | INFO     | exitmsg: OK
[2025-10-12 20:47:16] 2025-10-12 18:46:39,846 | INFO     | cpuconsumptiontime: 56437 s
[2025-10-12 20:47:16] 2025-10-12 18:46:39,846 | INFO     | nevents: 400
[2025-10-12 20:47:16] 2025-10-12 18:46:39,847 | INFO     | neventsw: 0
[2025-10-12 20:47:16] 2025-10-12 18:46:39,847 | INFO     | pid: 12072
[2025-10-12 20:47:16] 2025-10-12 18:46:39,847 | INFO     | pgrp: 12072
[2025-10-12 20:47:16] 2025-10-12 18:46:39,847 | INFO     | corecount: 8
[2025-10-12 20:47:16] 2025-10-12 18:46:39,847 | INFO     | event service: False
[2025-10-12 20:47:16] 2025-10-12 18:46:39,847 | INFO     | sizes: {0: 2348029, 1: 2348885, 2: 2348885, 12: 2348913, 23: 2348941, 34: 2348969, 45: 2349125, 55: 2349153, 66: 2349181, 77: 2349209, 87: 2349265, 93: 2349835, 98
[2025-10-12 20:47:16] 2025-10-12 18:46:39,847 | INFO     | --------------------------------------------------
[2025-10-12 20:47:16] 2025-10-12 18:46:39,847 | INFO     | 
[2025-10-12 20:47:16] 2025-10-12 18:46:39,847 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2025-10-12 20:47:16] 2025-10-12 18:46:40,436 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 20:47:16] 2025-10-12 18:46:40,436 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 20:47:16] 2025-10-12 18:46:40,436 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 20:47:16] 2025-10-12 18:46:40,436 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 20:47:16] 2025-10-12 18:46:40,436 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 20:47:16] 2025-10-12 18:46:40,436 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 20:47:16] 2025-10-12 18:46:40,436 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 20:47:16] 2025-10-12 18:46:40,437 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 20:47:16] 2025-10-12 18:46:40,437 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 20:47:16] 2025-10-12 18:46:40,437 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 20:47:16] 2025-10-12 18:46:40,437 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 20:47:16] 2025-10-12 18:46:40,437 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 20:47:16] 2025-10-12 18:46:40,437 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 20:47:16] 2025-10-12 18:46:40,437 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 20:47:16] 2025-10-12 18:46:40,437 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 20:47:16] 2025-10-12 18:46:40,437 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 20:47:16] 2025-10-12 18:46:40,437 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 20:47:16] 2025-10-12 18:46:40,437 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 20:47:16] 2025-10-12 18:46:40,437 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 20:47:16] 2025-10-12 18:46:40,438 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 20:47:16] 2025-10-12 18:46:40,438 | INFO     | job 6839866920 has completed (purged errors)
[2025-10-12 20:47:16] 2025-10-12 18:46:40,438 | INFO     | overall cleanup function is called
[2025-10-12 20:47:16] 2025-10-12 18:46:41,454 | INFO     | --- collectZombieJob: --- 10, [12072]
[2025-10-12 20:47:16] 2025-10-12 18:46:41,454 | INFO     | zombie collector waiting for pid 12072
[2025-10-12 20:47:16] 2025-10-12 18:46:41,455 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 20:47:16] 2025-10-12 18:46:41,455 | INFO     | collected zombie processes
[2025-10-12 20:47:16] 2025-10-12 18:46:41,455 | INFO     | will attempt to kill all subprocesses of pid=12072
[2025-10-12 20:47:16] 2025-10-12 18:46:41,589 | INFO     | process IDs to be killed: [12072] (in reverse order)
[2025-10-12 20:47:16] 2025-10-12 18:46:42,187 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 20:47:16] 2025-10-12 18:46:42,187 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 20:47:16] 2025-10-12 18:46:42,191 | INFO     | did not find any defunct processes belonging to 12072
[2025-10-12 20:47:16] 2025-10-12 18:46:42,200 | INFO     | did not find any defunct processes belonging to 12072
[2025-10-12 20:47:16] 2025-10-12 18:46:42,200 | INFO     | ready for new job
[2025-10-12 20:47:16] 2025-10-12 18:46:42,201 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 20:47:16] 2025-10-12 18:46:42,203 | INFO     | ***************************************
[2025-10-12 20:47:16] 2025-10-12 18:46:42,203 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 20:47:16] 2025-10-12 18:46:42,203 | INFO     | ***************************************
[2025-10-12 20:47:16] 2025-10-12 18:46:42,203 | INFO     | 
[2025-10-12 20:47:16] 2025-10-12 18:46:42,204 | INFO     | pilot is running in a VM
[2025-10-12 20:47:16] 2025-10-12 18:46:42,204 | INFO     | architecture information:
[2025-10-12 20:47:16] 2025-10-12 18:46:42,214 | INFO     | executing command: cat /etc/os-release
[2025-10-12 20:47:16] 2025-10-12 18:46:42,392 | INFO     | cat /etc/os-release:
[2025-10-12 20:47:16] NAME="CentOS Linux"
[2025-10-12 20:47:16] VERSION="7 (Core)"
[2025-10-12 20:47:16] ID="centos"
[2025-10-12 20:47:16] ID_LIKE="rhel fedora"
[2025-10-12 20:47:16] VERSION_ID="7"
[2025-10-12 20:47:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 20:47:16] ANSI_COLOR="0;31"
[2025-10-12 20:47:16] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 20:47:16] HOME_URL="https://www.centos.org/"
[2025-10-12 20:47:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 20:47:16] 
[2025-10-12 20:47:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 20:47:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 20:47:16] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 20:47:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 20:47:16] 
[2025-10-12 20:47:16] 2025-10-12 18:46:42,392 | INFO     | ***************************************
[2025-10-12 20:47:16] 2025-10-12 18:46:42,896 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2025-10-12 20:47:16] 2025-10-12 18:46:43,138 | INFO     | sufficient remaining disk space (495525560320 B)
[2025-10-12 20:47:16] 2025-10-12 18:46:43,138 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 20:47:16] 2025-10-12 18:46:43,138 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 20:47:16] 2025-10-12 18:46:43,138 | INFO     | update_server=False
[2025-10-12 20:47:16] 2025-10-12 18:46:43,139 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 20:47:16] 2025-10-12 18:46:43,141 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 20:47:16] 2025-10-12 18:46:43,555 | INFO     | all payload control threads have been joined
[2025-10-12 20:47:16] 2025-10-12 18:46:43,702 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 20:47:16] 2025-10-12 18:46:43,702 | INFO     | aborting loop
[2025-10-12 20:47:16] 2025-10-12 18:46:43,786 | INFO     | all data control threads have been joined
[2025-10-12 20:47:16] 2025-10-12 18:46:44,143 | INFO     | [job] retrieve thread has finished
[2025-10-12 20:47:16] 2025-10-12 18:46:44,200 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 20:47:16] 2025-10-12 18:46:44,431 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 20:47:16] 2025-10-12 18:46:44,561 | INFO     | [payload] control thread has finished
[2025-10-12 20:47:16] 2025-10-12 18:46:44,565 | INFO     | all job control threads have been joined
[2025-10-12 20:47:16] 2025-10-12 18:46:44,708 | INFO     | [job] job monitor thread has finished
[2025-10-12 20:47:16] 2025-10-12 18:46:44,792 | INFO     | [data] control thread has finished
[2025-10-12 20:47:16] 2025-10-12 18:46:44,864 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 20:47:16] 2025-10-12 18:46:45,148 | INFO     | [data] copytool_out thread has finished
[2025-10-12 20:47:16] 2025-10-12 18:46:45,211 | INFO     | [payload] validate_post thread has finished
[2025-10-12 20:47:16] 2025-10-12 18:46:45,289 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 20:47:16] 2025-10-12 18:46:45,454 | INFO     | [data] copytool_in thread has finished
[2025-10-12 20:47:16] 2025-10-12 18:46:45,485 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 20:47:16] 2025-10-12 18:46:45,529 | INFO     | [payload] failed_post thread has finished
[2025-10-12 20:47:16] 2025-10-12 18:46:45,569 | INFO     | [job] validate thread has finished
[2025-10-12 20:47:16] 2025-10-12 18:46:45,571 | INFO     | [job] control thread has finished
[2025-10-12 20:47:16] 2025-10-12 18:46:45,726 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 20:47:16] 2025-10-12 18:46:45,871 | INFO     | [job] queue monitor thread has finished
[2025-10-12 20:47:16] 2025-10-12 18:46:49,735 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 20:47:16] 2025-10-12 18:47:02,594 | INFO     | [monitor] cgroup control has ended
[2025-10-12 20:47:16] 2025-10-12 18:47:02,736 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140126852278080)>', '<ExcThread(monitor, started 140126260819712)>']
[2025-10-12 20:47:16] 2025-10-12 18:47:07,762 | INFO     | all workflow threads have been joined
[2025-10-12 20:47:16] 2025-10-12 18:47:07,762 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 20:47:16] 2025-10-12 18:47:07,763 | INFO     | traces error code: 0
[2025-10-12 20:47:16] 2025-10-12 18:47:07,763 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 20:47:16] 2025-10-12 18:47:13,005 | INFO     | PID=5539 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-12 20:47:16] 2025-10-12 18:47:13,006 | INFO     | .. there are 9 such processes running
[2025-10-12 20:47:16] 2025-10-12 18:47:13,007 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 20:47:16] 2025-10-12 18:47:13,007 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 20:47:16] 2025-10-12 18:47:13,007 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 20:47:16] 2025-10-12 18:47:13,008 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 20:47:16] 2025-10-12 18:47:13,008 | INFO     | [monitor] control thread has ended
[2025-10-12 20:47:16] 2025-10-12 18:47:13,274 [wrapper] ==== pilot stdout END ====
[2025-10-12 20:47:16] 2025-10-12 18:47:13,286 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 20:47:16] 2025-10-12 18:47:13,330 [wrapper] pilotpid: 5539
[2025-10-12 20:47:16] 2025-10-12 18:47:13,389 [wrapper] Pilot exit status: 0
[2025-10-12 20:47:16] 2025-10-12 18:47:13,896 [wrapper] pandaids: 6839866920
[2025-10-12 20:47:16] 2025-10-12 18:47:14,790 [wrapper] cleanup supervisor_pilot 21871 5540
[2025-10-12 20:47:16] 2025-10-12 18:47:14,844 [wrapper] Test setup, not cleaning
[2025-10-12 20:47:16] 2025-10-12 18:47:14,924 [wrapper] apfmon messages muted
[2025-10-12 20:47:16] 2025-10-12 18:47:14,986 [wrapper] ==== wrapper stdout END ====
[2025-10-12 20:47:16] 2025-10-12 18:47:15,054 [wrapper] ==== wrapper stderr END ====
[2025-10-12 20:47:16]  *** Error codes and diagnostics ***
[2025-10-12 20:47:16]     "exeErrorCode": 0,
[2025-10-12 20:47:16]     "exeErrorDiag": "",
[2025-10-12 20:47:16]     "pilotErrorCode": 0,
[2025-10-12 20:47:16]     "pilotErrorDiag": "",
[2025-10-12 20:47:16]  *** Listing of results directory ***
[2025-10-12 20:47:16] total 419976
[2025-10-12 20:47:16] -rw-r--r--. 1 boinc boinc    557409 Oct 12 12:38 pilot3.tar.gz
[2025-10-12 20:47:16] -rw-r--r--. 1 boinc boinc      5112 Oct 12 12:50 queuedata.json
[2025-10-12 20:47:16] -rwx------. 1 boinc boinc     36292 Oct 12 12:52 runpilot2-wrapper.sh
[2025-10-12 20:47:16] -rw-r--r--. 1 boinc boinc       100 Oct 12 16:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 20:47:16] -rwxr-xr-x. 1 boinc boinc      7986 Oct 12 16:22 run_atlas
[2025-10-12 20:47:16] -rw-r--r--. 1 boinc boinc       105 Oct 12 16:22 job.xml
[2025-10-12 20:47:16] -rw-r--r--. 1 boinc boinc      6390 Oct 12 16:22 init_data.xml
[2025-10-12 20:47:16] -rw-r--r--. 2 boinc boinc 222131140 Oct 12 16:22 EVNT.46676267._003628.pool.root.1
[2025-10-12 20:47:16] -rw-r--r--. 2 boinc boinc     15120 Oct 12 16:22 start_atlas.sh
[2025-10-12 20:47:16] drwxrwx--x. 2 boinc boinc        68 Oct 12 16:22 shared
[2025-10-12 20:47:16] -rw-r--r--. 2 boinc boinc    569686 Oct 12 16:22 input.tar.gz
[2025-10-12 20:47:16] -rw-r--r--. 1 boinc boinc         0 Oct 12 16:22 boinc_lockfile
[2025-10-12 20:47:16] -rw-r--r--. 1 boinc boinc      2550 Oct 12 16:23 pandaJob.out
[2025-10-12 20:47:16] -rw-------. 1 boinc boinc    975528 Oct 12 16:27 agis_schedconf.cvmfs.json
[2025-10-12 20:47:16] drwx------. 5 boinc boinc      4096 Oct 12 16:27 pilot3
[2025-10-12 20:47:16] -rw-------. 1 boinc boinc 198916637 Oct 12 20:43 HITS.46676269._076239.pool.root.1
[2025-10-12 20:47:16] -rw-r--r--. 1 boinc boinc       531 Oct 12 20:43 boinc_task_state.xml
[2025-10-12 20:47:16] -rw-------. 1 boinc boinc      1020 Oct 12 20:44 memory_monitor_summary.json
[2025-10-12 20:47:16] -rw-------. 1 boinc boinc   1560580 Oct 12 20:44 agis_ddmendpoints.agis.ALL.json
[2025-10-12 20:47:16] -rw-------. 1 boinc boinc    486260 Oct 12 20:44 log.46676269._076239.job.log.tgz.1
[2025-10-12 20:47:16] -rw-------. 1 boinc boinc      7784 Oct 12 20:46 heartbeat.json
[2025-10-12 20:47:16] -rw-r--r--. 1 boinc boinc      8192 Oct 12 20:47 boinc_mmap_file
[2025-10-12 20:47:16] -rw-r--r--. 1 boinc boinc        28 Oct 12 20:47 wrapper_checkpoint.txt
[2025-10-12 20:47:16] -rw-------. 1 boinc boinc        95 Oct 12 20:47 pilot_heartbeat.json
[2025-10-12 20:47:16] -rw-------. 1 boinc boinc       819 Oct 12 20:47 pilotlog.txt
[2025-10-12 20:47:16] -rw-------. 1 boinc boinc   2073855 Oct 12 20:47 log.46676269._076239.job.log.1
[2025-10-12 20:47:16] -rw-------. 1 boinc boinc       357 Oct 12 20:47 output.list
[2025-10-12 20:47:16] -rw-r--r--. 1 boinc boinc       620 Oct 12 20:47 runtime_log
[2025-10-12 20:47:16] -rw-------. 1 boinc boinc   2580480 Oct 12 20:47 result.tar.gz
[2025-10-12 20:47:16] -rw-r--r--. 1 boinc boinc      8703 Oct 12 20:47 runtime_log.err
[2025-10-12 20:47:16] -rw-------. 1 boinc boinc       657 Oct 12 20:47 0ZbNDmvr8R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmyUjNDmwopoxm.diag
[2025-10-12 20:47:16] -rw-r--r--. 1 boinc boinc     20631 Oct 12 20:47 stderr.txt
[2025-10-12 20:47:16] HITS file was successfully produced:
[2025-10-12 20:47:16] -rw-------. 1 boinc boinc 198916637 Oct 12 20:43 shared/HITS.pool.root.1
[2025-10-12 20:47:16]  *** Contents of shared directory: ***
[2025-10-12 20:47:16] total 414280
[2025-10-12 20:47:16] -rw-r--r--. 2 boinc boinc 222131140 Oct 12 16:22 ATLAS.root_0
[2025-10-12 20:47:16] -rw-r--r--. 2 boinc boinc     15120 Oct 12 16:22 start_atlas.sh
[2025-10-12 20:47:16] -rw-r--r--. 2 boinc boinc    569686 Oct 12 16:22 input.tar.gz
[2025-10-12 20:47:16] -rw-------. 1 boinc boinc 198916637 Oct 12 20:43 HITS.pool.root.1
[2025-10-12 20:47:16] -rw-------. 1 boinc boinc   2580480 Oct 12 20:47 result.tar.gz
20:47:18 (1415): run_atlas exited; CPU time 56661.931417
20:47:18 (1415): called boinc_finish(0)

</stderr_txt>
]]>

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