Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:23:59 (29207): wrapper (7.7.26015): starting
16:23:59 (29207): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 16:23:59] Arguments: --nthreads 8
[2025-10-12 16:23:59] Threads: 8
[2025-10-12 16:23:59] Checking for CVMFS
[2025-10-12 16:24:00] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 16:24:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 16:24:01] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 16:24:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 16:24:02] 2.11.2.0 9336 17759 72376 151623 2 109 21996248 25165825 4147 130560 0 4900293 99.938 1852685 1487 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-10-12 16:24:02] CVMFS is ok
[2025-10-12 16:24:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 16:24:02] Checking for apptainer binary...
[2025-10-12 16:24:02] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 16:24:02] Running /usr/bin/apptainer --version
[2025-10-12 16:24:02] apptainer version 1.3.2-1.el7
[2025-10-12 16:24:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 16:24:04] cg-vwn413.simple-grid.lan
[2025-10-12 16:24:04] apptainer works
[2025-10-12 16:24:04] Set ATHENA_PROC_NUMBER=8
[2025-10-12 16:24:04] Set ATHENA_CORE_NUMBER=8
[2025-10-12 16:24:04] Starting ATLAS job with PandaID=6839866919
[2025-10-12 16:24:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/10 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 20:16:08]  *** The last 200 lines of the pilot log: ***
[2025-10-12 20:16:08] 2025-10-12 18:15:07,037 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 20:16:08] 2025-10-12 18:15:07,037 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 20:16:08] 2025-10-12 18:15:07,043 | INFO     | fitting pss+swap vs Time
[2025-10-12 20:16:08] 2025-10-12 18:15:07,044 | INFO     | sum of square deviations: 3485088600.0
[2025-10-12 20:16:08] 2025-10-12 18:15:07,046 | INFO     | sum of deviations: -27621896139.5
[2025-10-12 20:16:08] 2025-10-12 18:15:07,046 | INFO     | mean x: 1760285967.5
[2025-10-12 20:16:08] 2025-10-12 18:15:07,046 | INFO     | mean y: 2512154.245535714
[2025-10-12 20:16:08] 2025-10-12 18:15:07,046 | INFO     | -- intersect: 13954076016.956018
[2025-10-12 20:16:08] 2025-10-12 18:15:07,046 | INFO     | intersect: 13954076016.956018
[2025-10-12 20:16:08] 2025-10-12 18:15:07,047 | INFO     | chi2: 2.48700497669449
[2025-10-12 20:16:08] 2025-10-12 18:15:07,047 | INFO     | sum of square deviations: 3256879670.0
[2025-10-12 20:16:08] 2025-10-12 18:15:07,049 | INFO     | sum of deviations: -12156618752.000004
[2025-10-12 20:16:08] 2025-10-12 18:15:07,049 | INFO     | mean x: 1760285815.0
[2025-10-12 20:16:08] 2025-10-12 18:15:07,049 | INFO     | mean y: 2522309.5662100455
[2025-10-12 20:16:08] 2025-10-12 18:15:07,050 | INFO     | -- intersect: 6572959573.374795
[2025-10-12 20:16:08] 2025-10-12 18:15:07,050 | INFO     | intersect: 6572959573.374795
[2025-10-12 20:16:08] 2025-10-12 18:15:07,050 | INFO     | chi2: 1.720012233290467
[2025-10-12 20:16:08] 2025-10-12 18:15:07,050 | INFO     | current chi2=1.720012233290467 (change=30.840016429056078 %)
[2025-10-12 20:16:08] 2025-10-12 18:15:07,051 | INFO     | sum of square deviations: 3038856977.5
[2025-10-12 20:16:08] 2025-10-12 18:15:07,052 | INFO     | sum of deviations: -11725822600.000004
[2025-10-12 20:16:08] 2025-10-12 18:15:07,053 | INFO     | mean x: 1760285662.5
[2025-10-12 20:16:08] 2025-10-12 18:15:07,053 | INFO     | mean y: 2522611.691588785
[2025-10-12 20:16:08] 2025-10-12 18:15:07,053 | INFO     | -- intersect: 6794812461.66643
[2025-10-12 20:16:08] 2025-10-12 18:15:07,053 | INFO     | intersect: 6794812461.66643
[2025-10-12 20:16:08] 2025-10-12 18:15:07,054 | INFO     | chi2: 1.7191940590379522
[2025-10-12 20:16:08] 2025-10-12 18:15:07,054 | INFO     | current chi2=1.7191940590379522 (change=0.047567932173926464 %)
[2025-10-12 20:16:08] 2025-10-12 18:15:07,054 | INFO     | right removable region: 213
[2025-10-12 20:16:08] 2025-10-12 18:15:07,054 | INFO     | sum of square deviations: 3256879670.0
[2025-10-12 20:16:08] 2025-10-12 18:15:07,056 | INFO     | sum of deviations: -62585195654.0
[2025-10-12 20:16:08] 2025-10-12 18:15:07,056 | INFO     | mean x: 1760286120.0
[2025-10-12 20:16:08] 2025-10-12 18:15:07,056 | INFO     | mean y: 2535288.8812785386
[2025-10-12 20:16:08] 2025-10-12 18:15:07,057 | INFO     | -- intersect: 33828731645.475723
[2025-10-12 20:16:08] 2025-10-12 18:15:07,057 | INFO     | intersect: 33828731645.475723
[2025-10-12 20:16:08] 2025-10-12 18:15:07,057 | INFO     | chi2: 0.9944207479473548
[2025-10-12 20:16:08] 2025-10-12 18:15:07,057 | INFO     | current chi2=0.9944207479473548 (change=60.01532939153776 %)
[2025-10-12 20:16:08] 2025-10-12 18:15:07,058 | INFO     | sum of square deviations: 3038856977.5
[2025-10-12 20:16:08] 2025-10-12 18:15:07,059 | INFO     | sum of deviations: -58954584051.0
[2025-10-12 20:16:08] 2025-10-12 18:15:07,060 | INFO     | mean x: 1760286272.5
[2025-10-12 20:16:08] 2025-10-12 18:15:07,060 | INFO     | mean y: 2532722.0
[2025-10-12 20:16:08] 2025-10-12 18:15:07,060 | INFO     | -- intersect: 34152525885.31686
[2025-10-12 20:16:08] 2025-10-12 18:15:07,060 | INFO     | intersect: 34152525885.31686
[2025-10-12 20:16:08] 2025-10-12 18:15:07,060 | INFO     | chi2: 0.9851391691235638
[2025-10-12 20:16:08] 2025-10-12 18:15:07,061 | INFO     | current chi2=0.9851391691235638 (change=0.9333653629964652 %)
[2025-10-12 20:16:08] 2025-10-12 18:15:07,061 | INFO     | left removable region: 20
[2025-10-12 20:16:08] 2025-10-12 18:15:07,061 | INFO     | sum of square deviations: 2229146912.0
[2025-10-12 20:16:08] 2025-10-12 18:15:07,063 | INFO     | sum of deviations: -29681051575.999992
[2025-10-12 20:16:08] 2025-10-12 18:15:07,063 | INFO     | mean x: 1760286242.0
[2025-10-12 20:16:08] 2025-10-12 18:15:07,063 | INFO     | mean y: 2534381.896373057
[2025-10-12 20:16:08] 2025-10-12 18:15:07,063 | INFO     | -- intersect: 23440714457.0036
[2025-10-12 20:16:08] 2025-10-12 18:15:07,063 | INFO     | intersect: 23440714457.0036
[2025-10-12 20:16:08] 2025-10-12 18:15:07,063 | INFO     | chi2: 0.17079504743270907
[2025-10-12 20:16:08] 2025-10-12 18:15:07,064 | INFO     | -- intersect: 23440714457.0036
[2025-10-12 20:16:08] 2025-10-12 18:15:07,064 | INFO     | current memory leak: -13.31 B/s (using 193 data points, chi2=0.17)
[2025-10-12 20:16:08] 2025-10-12 18:15:07,064 | INFO     | could have reported an average CPU frequency of 1999 MHz (11 samples)
[2025-10-12 20:16:08] 2025-10-12 18:15:07,065 | INFO     | ..............................
[2025-10-12 20:16:08] 2025-10-12 18:15:07,065 | INFO     | . Timing measurements:
[2025-10-12 20:16:08] 2025-10-12 18:15:07,065 | INFO     | . get job = 0 s
[2025-10-12 20:16:08] 2025-10-12 18:15:07,065 | INFO     | . initial setup = 2 s
[2025-10-12 20:16:08] 2025-10-12 18:15:07,065 | INFO     | . payload setup = 31 s
[2025-10-12 20:16:08] 2025-10-12 18:15:07,065 | INFO     | . stage-in = 0 s
[2025-10-12 20:16:08] 2025-10-12 18:15:07,065 | INFO     | . payload execution = 13659 s
[2025-10-12 20:16:08] 2025-10-12 18:15:07,066 | INFO     | . stage-out = 2 s
[2025-10-12 20:16:08] 2025-10-12 18:15:07,066 | INFO     | . log creation = 0 s
[2025-10-12 20:16:08] 2025-10-12 18:15:07,066 | INFO     | ..............................
[2025-10-12 20:16:08] 2025-10-12 18:15:07,206 | INFO     | 
[2025-10-12 20:16:08] 2025-10-12 18:15:07,207 | INFO     | job summary report
[2025-10-12 20:16:08] 2025-10-12 18:15:07,207 | INFO     | --------------------------------------------------
[2025-10-12 20:16:08] 2025-10-12 18:15:07,207 | INFO     | PanDA job id: 6839866919
[2025-10-12 20:16:08] 2025-10-12 18:15:07,207 | INFO     | task id: 46676269
[2025-10-12 20:16:08] 2025-10-12 18:15:07,207 | INFO     | errors: (none)
[2025-10-12 20:16:08] 2025-10-12 18:15:07,207 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 20:16:08] 2025-10-12 18:15:07,207 | INFO     | pilot state: finished 
[2025-10-12 20:16:08] 2025-10-12 18:15:07,207 | INFO     | transexitcode: 0
[2025-10-12 20:16:08] 2025-10-12 18:15:07,207 | INFO     | exeerrorcode: 0
[2025-10-12 20:16:08] 2025-10-12 18:15:07,208 | INFO     | exeerrordiag: 
[2025-10-12 20:16:08] 2025-10-12 18:15:07,208 | INFO     | exitcode: 0
[2025-10-12 20:16:08] 2025-10-12 18:15:07,208 | INFO     | exitmsg: OK
[2025-10-12 20:16:08] 2025-10-12 18:15:07,208 | INFO     | cpuconsumptiontime: 53108 s
[2025-10-12 20:16:08] 2025-10-12 18:15:07,208 | INFO     | nevents: 400
[2025-10-12 20:16:08] 2025-10-12 18:15:07,208 | INFO     | neventsw: 0
[2025-10-12 20:16:08] 2025-10-12 18:15:07,208 | INFO     | pid: 12805
[2025-10-12 20:16:08] 2025-10-12 18:15:07,208 | INFO     | pgrp: 12805
[2025-10-12 20:16:08] 2025-10-12 18:15:07,208 | INFO     | corecount: 8
[2025-10-12 20:16:08] 2025-10-12 18:15:07,208 | INFO     | event service: False
[2025-10-12 20:16:08] 2025-10-12 18:15:07,208 | INFO     | sizes: {0: 2348687, 1: 2348886, 2: 2348886, 12: 2348914, 16: 2349204, 23: 2349232, 13695: 2379309, 13698: 2388309, 13701: 2388365, 13797: 2388559}
[2025-10-12 20:16:08] 2025-10-12 18:15:07,209 | INFO     | --------------------------------------------------
[2025-10-12 20:16:08] 2025-10-12 18:15:07,209 | INFO     | 
[2025-10-12 20:16:08] 2025-10-12 18:15:07,209 | INFO     | executing command: ls -lF /var/lib/boinc/slots/10
[2025-10-12 20:16:08] 2025-10-12 18:15:07,235 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 20:16:08] 2025-10-12 18:15:07,236 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 20:16:08] 2025-10-12 18:15:07,236 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 20:16:08] 2025-10-12 18:15:07,236 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 20:16:08] 2025-10-12 18:15:07,236 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 20:16:08] 2025-10-12 18:15:07,236 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 20:16:08] 2025-10-12 18:15:07,236 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 20:16:08] 2025-10-12 18:15:07,237 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 20:16:08] 2025-10-12 18:15:07,237 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 20:16:08] 2025-10-12 18:15:07,237 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 20:16:08] 2025-10-12 18:15:07,237 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 20:16:08] 2025-10-12 18:15:07,237 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 20:16:08] 2025-10-12 18:15:07,237 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 20:16:08] 2025-10-12 18:15:07,237 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 20:16:08] 2025-10-12 18:15:07,237 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 20:16:08] 2025-10-12 18:15:07,237 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 20:16:08] 2025-10-12 18:15:07,238 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 20:16:08] 2025-10-12 18:15:07,238 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 20:16:08] 2025-10-12 18:15:07,238 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 20:16:08] 2025-10-12 18:15:07,238 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 20:16:08] 2025-10-12 18:15:07,238 | INFO     | job 6839866919 has completed (purged errors)
[2025-10-12 20:16:08] 2025-10-12 18:15:07,238 | INFO     | overall cleanup function is called
[2025-10-12 20:16:08] 2025-10-12 18:15:08,247 | INFO     | --- collectZombieJob: --- 10, [12805]
[2025-10-12 20:16:08] 2025-10-12 18:15:08,248 | INFO     | zombie collector waiting for pid 12805
[2025-10-12 20:16:08] 2025-10-12 18:15:08,248 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 20:16:08] 2025-10-12 18:15:08,248 | INFO     | collected zombie processes
[2025-10-12 20:16:08] 2025-10-12 18:15:08,248 | INFO     | will attempt to kill all subprocesses of pid=12805
[2025-10-12 20:16:08] 2025-10-12 18:15:08,385 | INFO     | process IDs to be killed: [12805] (in reverse order)
[2025-10-12 20:16:08] 2025-10-12 18:15:09,094 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 20:16:08] 2025-10-12 18:15:09,095 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 20:16:08] 2025-10-12 18:15:09,098 | INFO     | did not find any defunct processes belonging to 12805
[2025-10-12 20:16:08] 2025-10-12 18:15:09,101 | INFO     | did not find any defunct processes belonging to 12805
[2025-10-12 20:16:08] 2025-10-12 18:15:09,102 | INFO     | ready for new job
[2025-10-12 20:16:08] 2025-10-12 18:15:09,102 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 20:16:08] 2025-10-12 18:15:09,104 | INFO     | ***************************************
[2025-10-12 20:16:08] 2025-10-12 18:15:09,104 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 20:16:08] 2025-10-12 18:15:09,105 | INFO     | ***************************************
[2025-10-12 20:16:08] 2025-10-12 18:15:09,105 | INFO     | 
[2025-10-12 20:16:08] 2025-10-12 18:15:09,105 | INFO     | pilot is running in a VM
[2025-10-12 20:16:08] 2025-10-12 18:15:09,105 | INFO     | architecture information:
[2025-10-12 20:16:08] 2025-10-12 18:15:09,110 | INFO     | executing command: cat /etc/os-release
[2025-10-12 20:16:08] 2025-10-12 18:15:09,260 | INFO     | cat /etc/os-release:
[2025-10-12 20:16:08] NAME="CentOS Linux"
[2025-10-12 20:16:08] VERSION="7 (Core)"
[2025-10-12 20:16:08] ID="centos"
[2025-10-12 20:16:08] ID_LIKE="rhel fedora"
[2025-10-12 20:16:08] VERSION_ID="7"
[2025-10-12 20:16:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 20:16:08] ANSI_COLOR="0;31"
[2025-10-12 20:16:08] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 20:16:08] HOME_URL="https://www.centos.org/"
[2025-10-12 20:16:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 20:16:08] 
[2025-10-12 20:16:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 20:16:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 20:16:08] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 20:16:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 20:16:08] 
[2025-10-12 20:16:08] 2025-10-12 18:15:09,260 | INFO     | ***************************************
[2025-10-12 20:16:08] 2025-10-12 18:15:09,763 | INFO     | executing command: df -mP /var/lib/boinc/slots/10
[2025-10-12 20:16:08] 2025-10-12 18:15:10,013 | INFO     | sufficient remaining disk space (495294873600 B)
[2025-10-12 20:16:08] 2025-10-12 18:15:10,013 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 20:16:08] 2025-10-12 18:15:10,014 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 20:16:08] 2025-10-12 18:15:10,014 | INFO     | update_server=False
[2025-10-12 20:16:08] 2025-10-12 18:15:10,014 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 20:16:08] 2025-10-12 18:15:10,927 | INFO     | all job control threads have been joined
[2025-10-12 20:16:08] 2025-10-12 18:15:11,002 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 20:16:08] 2025-10-12 18:15:11,003 | INFO     | aborting loop
[2025-10-12 20:16:08] 2025-10-12 18:15:11,012 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 20:16:08] 2025-10-12 18:15:11,019 | INFO     | [job] retrieve thread has finished
[2025-10-12 20:16:08] 2025-10-12 18:15:11,048 | INFO     | all data control threads have been joined
[2025-10-12 20:16:08] 2025-10-12 18:15:11,100 | INFO     | all payload control threads have been joined
[2025-10-12 20:16:08] 2025-10-12 18:15:11,288 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 20:16:08] 2025-10-12 18:15:11,296 | INFO     | [data] copytool_in thread has finished
[2025-10-12 20:16:08] 2025-10-12 18:15:11,903 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 20:16:08] 2025-10-12 18:15:11,933 | INFO     | [job] control thread has finished
[2025-10-12 20:16:08] 2025-10-12 18:15:11,940 | INFO     | [payload] failed_post thread has finished
[2025-10-12 20:16:08] 2025-10-12 18:15:11,944 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 20:16:08] 2025-10-12 18:15:12,008 | INFO     | [job] job monitor thread has finished
[2025-10-12 20:16:08] 2025-10-12 18:15:12,032 | INFO     | [payload] validate_post thread has finished
[2025-10-12 20:16:08] 2025-10-12 18:15:12,036 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 20:16:08] 2025-10-12 18:15:12,055 | INFO     | [data] control thread has finished
[2025-10-12 20:16:08] 2025-10-12 18:15:12,106 | INFO     | [payload] control thread has finished
[2025-10-12 20:16:08] 2025-10-12 18:15:12,166 | INFO     | [job] validate thread has finished
[2025-10-12 20:16:08] 2025-10-12 18:15:12,221 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 20:16:08] 2025-10-12 18:15:12,391 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 20:16:08] 2025-10-12 18:15:13,019 | INFO     | [data] copytool_out thread has finished
[2025-10-12 20:16:08] 2025-10-12 18:15:13,226 | INFO     | [job] queue monitor thread has finished
[2025-10-12 20:16:08] 2025-10-12 18:15:15,953 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 20:16:08] 2025-10-12 18:15:38,753 | INFO     | PID=847 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j
[2025-10-12 20:16:08] 2025-10-12 18:15:38,753 | INFO     | .. there are 9 such processes running
[2025-10-12 20:16:08] 2025-10-12 18:15:38,754 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 20:16:08] 2025-10-12 18:15:38,754 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 20:16:08] 2025-10-12 18:15:38,754 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 20:16:08] 2025-10-12 18:15:58,201 | INFO     | [monitor] cgroup control has ended
[2025-10-12 20:16:08] 2025-10-12 18:15:59,404 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139751502657344)>', '<ExcThread(monitor, started 139751206131456)>']
[2025-10-12 20:16:08] 2025-10-12 18:15:59,877 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 20:16:08] 2025-10-12 18:15:59,878 | INFO     | [monitor] control thread has ended
[2025-10-12 20:16:08] 2025-10-12 18:16:04,429 | INFO     | all workflow threads have been joined
[2025-10-12 20:16:08] 2025-10-12 18:16:04,430 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 20:16:08] 2025-10-12 18:16:04,430 | INFO     | traces error code: 0
[2025-10-12 20:16:08] 2025-10-12 18:16:04,430 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 20:16:08] 2025-10-12 18:16:04,778 [wrapper] ==== pilot stdout END ====
[2025-10-12 20:16:08] 2025-10-12 18:16:04,869 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 20:16:08] 2025-10-12 18:16:04,938 [wrapper] pilotpid: 847
[2025-10-12 20:16:08] 2025-10-12 18:16:05,029 [wrapper] Pilot exit status: 0
[2025-10-12 20:16:08] 2025-10-12 18:16:05,523 [wrapper] pandaids: 6839866919
[2025-10-12 20:16:08] 2025-10-12 18:16:06,394 [wrapper] cleanup supervisor_pilot 14321 848
[2025-10-12 20:16:08] 2025-10-12 18:16:06,407 [wrapper] Test setup, not cleaning
[2025-10-12 20:16:08] 2025-10-12 18:16:06,427 [wrapper] apfmon messages muted
[2025-10-12 20:16:08] 2025-10-12 18:16:06,563 [wrapper] ==== wrapper stdout END ====
[2025-10-12 20:16:08] 2025-10-12 18:16:06,685 [wrapper] ==== wrapper stderr END ====
[2025-10-12 20:16:08]  *** Error codes and diagnostics ***
[2025-10-12 20:16:08]     "exeErrorCode": 0,
[2025-10-12 20:16:08]     "exeErrorDiag": "",
[2025-10-12 20:16:08]     "pilotErrorCode": 0,
[2025-10-12 20:16:08]     "pilotErrorDiag": "",
[2025-10-12 20:16:08]  *** Listing of results directory ***
[2025-10-12 20:16:08] total 414856
[2025-10-12 20:16:08] -rw-r--r--. 1 boinc boinc    557409 Oct 12 12:38 pilot3.tar.gz
[2025-10-12 20:16:08] -rw-r--r--. 1 boinc boinc      5112 Oct 12 12:50 queuedata.json
[2025-10-12 20:16:08] -rwx------. 1 boinc boinc     36292 Oct 12 12:52 runpilot2-wrapper.sh
[2025-10-12 20:16:08] -rw-r--r--. 1 boinc boinc       100 Oct 12 16:23 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 20:16:08] -rwxr-xr-x. 1 boinc boinc      7986 Oct 12 16:23 run_atlas
[2025-10-12 20:16:08] -rw-r--r--. 1 boinc boinc       105 Oct 12 16:23 job.xml
[2025-10-12 20:16:08] -rw-r--r--. 1 boinc boinc      6384 Oct 12 16:23 init_data.xml
[2025-10-12 20:16:08] -rw-r--r--. 2 boinc boinc 222131140 Oct 12 16:23 EVNT.46676267._003628.pool.root.1
[2025-10-12 20:16:08] -rw-r--r--. 2 boinc boinc     15120 Oct 12 16:23 start_atlas.sh
[2025-10-12 20:16:08] drwxrwx--x. 2 boinc boinc        68 Oct 12 16:23 shared
[2025-10-12 20:16:08] -rw-r--r--. 2 boinc boinc    569682 Oct 12 16:23 input.tar.gz
[2025-10-12 20:16:08] -rw-r--r--. 1 boinc boinc         0 Oct 12 16:23 boinc_lockfile
[2025-10-12 20:16:08] -rw-r--r--. 1 boinc boinc      2550 Oct 12 16:24 pandaJob.out
[2025-10-12 20:16:08] -rw-------. 1 boinc boinc    975528 Oct 12 16:24 agis_schedconf.cvmfs.json
[2025-10-12 20:16:08] drwx------. 5 boinc boinc      4096 Oct 12 16:24 pilot3
[2025-10-12 20:16:08] -rw-------. 1 boinc boinc 194135816 Oct 12 20:12 HITS.46676269._076238.pool.root.1
[2025-10-12 20:16:08] -rw-r--r--. 1 boinc boinc       530 Oct 12 20:12 boinc_task_state.xml
[2025-10-12 20:16:08] -rw-------. 1 boinc boinc      1017 Oct 12 20:13 memory_monitor_summary.json
[2025-10-12 20:16:08] -rw-------. 1 boinc boinc   1560580 Oct 12 20:13 agis_ddmendpoints.agis.ALL.json
[2025-10-12 20:16:08] -rw-------. 1 boinc boinc    464126 Oct 12 20:13 log.46676269._076238.job.log.tgz.1
[2025-10-12 20:16:08] -rw-------. 1 boinc boinc      7783 Oct 12 20:15 heartbeat.json
[2025-10-12 20:16:08] -rw-------. 1 boinc boinc        95 Oct 12 20:15 pilot_heartbeat.json
[2025-10-12 20:16:08] -rw-r--r--. 1 boinc boinc      8192 Oct 12 20:15 boinc_mmap_file
[2025-10-12 20:16:08] -rw-r--r--. 1 boinc boinc        28 Oct 12 20:15 wrapper_checkpoint.txt
[2025-10-12 20:16:08] -rw-------. 1 boinc boinc      4883 Oct 12 20:16 pilotlog.txt
[2025-10-12 20:16:08] -rw-------. 1 boinc boinc   1863355 Oct 12 20:16 log.46676269._076238.job.log.1
[2025-10-12 20:16:08] -rw-------. 1 boinc boinc       357 Oct 12 20:16 output.list
[2025-10-12 20:16:08] -rw-r--r--. 1 boinc boinc       620 Oct 12 20:16 runtime_log
[2025-10-12 20:16:08] -rw-------. 1 boinc boinc   2344960 Oct 12 20:16 result.tar.gz
[2025-10-12 20:16:08] -rw-r--r--. 1 boinc boinc      8717 Oct 12 20:16 runtime_log.err
[2025-10-12 20:16:08] -rw-------. 1 boinc boinc       657 Oct 12 20:16 8HZNDmvr8R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmxUjNDmP6NKWn.diag
[2025-10-12 20:16:08] -rw-r--r--. 1 boinc boinc     20571 Oct 12 20:16 stderr.txt
[2025-10-12 20:16:08] HITS file was successfully produced:
[2025-10-12 20:16:08] -rw-------. 1 boinc boinc 194135816 Oct 12 20:12 shared/HITS.pool.root.1
[2025-10-12 20:16:08]  *** Contents of shared directory: ***
[2025-10-12 20:16:08] total 409384
[2025-10-12 20:16:08] -rw-r--r--. 2 boinc boinc 222131140 Oct 12 16:23 ATLAS.root_0
[2025-10-12 20:16:08] -rw-r--r--. 2 boinc boinc     15120 Oct 12 16:23 start_atlas.sh
[2025-10-12 20:16:08] -rw-r--r--. 2 boinc boinc    569682 Oct 12 16:23 input.tar.gz
[2025-10-12 20:16:08] -rw-------. 1 boinc boinc 194135816 Oct 12 20:12 HITS.pool.root.1
[2025-10-12 20:16:08] -rw-------. 1 boinc boinc   2344960 Oct 12 20:16 result.tar.gz
20:16:09 (29207): run_atlas exited; CPU time 53288.955182
20:16:09 (29207): called boinc_finish(0)

</stderr_txt>
]]>

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