Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
10:23:46 (13274): wrapper (7.7.26015): starting
10:23:46 (13274): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 10:23:46] Arguments: --nthreads 8
[2025-10-12 10:23:46] Threads: 8
[2025-10-12 10:23:46] Checking for CVMFS
[2025-10-12 10:23:46] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 10:23:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 10:23:46] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 10:23:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 10:23:46] 2.11.2.0 2908 105176 82640 151623 2 56 14047332 20275201 1 130560 2 51296482 99.988 3345508 19715 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 10:23:46] CVMFS is ok
[2025-10-12 10:23:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 10:23:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 10:23:46] Further information can be found at the LHC@home message board.
[2025-10-12 10:23:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 10:23:46] Checking for apptainer binary...
[2025-10-12 10:23:46] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 10:23:46] Running /usr/bin/apptainer --version
[2025-10-12 10:23:46] apptainer version 1.3.2-1.el7
[2025-10-12 10:23:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 10:23:48] c-115-5.aglt2.org
[2025-10-12 10:23:48] apptainer works
[2025-10-12 10:23:48] Set ATHENA_PROC_NUMBER=8
[2025-10-12 10:23:48] Set ATHENA_CORE_NUMBER=8
[2025-10-12 10:23:48] Starting ATLAS job with PandaID=6839989386
[2025-10-12 10:23:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 12:12:35]  *** The last 200 lines of the pilot log: ***
[2025-10-12 12:12:35] 2025-10-12 16:12:02,577 | INFO     | monitor loop #482: job 0:6839989386 is in state 'finished'
[2025-10-12 12:12:35] 2025-10-12 16:12:02,578 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 12:12:35] 2025-10-12 16:12:03,237 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-12 12:12:35] 2025-10-12 16:12:03,241 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1729.125
[2025-10-12 12:12:35] 2025-10-12 16:12:03,243 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6839989386/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 12:12:35] 2025-10-12 16:12:03,244 | INFO     | extracted standard info from prmon json
[2025-10-12 12:12:35] 2025-10-12 16:12:03,244 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 12:12:35] 2025-10-12 16:12:03,244 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 12:12:35] 2025-10-12 16:12:03,245 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 12:12:35] 2025-10-12 16:12:03,245 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 12:12:35] 2025-10-12 16:12:03,249 | INFO     | fitting pss+swap vs Time
[2025-10-12 12:12:35] 2025-10-12 16:12:03,249 | INFO     | sum of square deviations: 369281342.5
[2025-10-12 12:12:35] 2025-10-12 16:12:03,250 | INFO     | sum of deviations: -3146015677.5000014
[2025-10-12 12:12:35] 2025-10-12 16:12:03,250 | INFO     | mean x: 1760282279.5
[2025-10-12 12:12:35] 2025-10-12 16:12:03,250 | INFO     | mean y: 2602161.0283018867
[2025-10-12 12:12:35] 2025-10-12 16:12:03,250 | INFO     | -- intersect: 14998961334.339201
[2025-10-12 12:12:35] 2025-10-12 16:12:03,251 | INFO     | intersect: 14998961334.339201
[2025-10-12 12:12:35] 2025-10-12 16:12:03,251 | INFO     | chi2: 1.5436665141283854
[2025-10-12 12:12:35] 2025-10-12 16:12:03,251 | INFO     | sum of square deviations: 319447850.0
[2025-10-12 12:12:35] 2025-10-12 16:12:03,252 | INFO     | sum of deviations: -2131554292.9999995
[2025-10-12 12:12:35] 2025-10-12 16:12:03,252 | INFO     | mean x: 1760282127.0
[2025-10-12 12:12:35] 2025-10-12 16:12:03,252 | INFO     | mean y: 2605275.4554455443
[2025-10-12 12:12:35] 2025-10-12 16:12:03,252 | INFO     | -- intersect: 11748299994.321203
[2025-10-12 12:12:35] 2025-10-12 16:12:03,252 | INFO     | intersect: 11748299994.321203
[2025-10-12 12:12:35] 2025-10-12 16:12:03,252 | INFO     | chi2: 1.546173553563831
[2025-10-12 12:12:35] 2025-10-12 16:12:03,252 | INFO     | current chi2=1.546173553563831 (change=-0.16240809867286557 %)
[2025-10-12 12:12:35] 2025-10-12 16:12:03,253 | INFO     | right removable region: 100
[2025-10-12 12:12:35] 2025-10-12 16:12:03,253 | INFO     | sum of square deviations: 319447850.0
[2025-10-12 12:12:35] 2025-10-12 16:12:03,253 | INFO     | sum of deviations: -18940439366.000004
[2025-10-12 12:12:35] 2025-10-12 16:12:03,254 | INFO     | mean x: 1760282432.0
[2025-10-12 12:12:35] 2025-10-12 16:12:03,254 | INFO     | mean y: 2649460.168316832
[2025-10-12 12:12:35] 2025-10-12 16:12:03,254 | INFO     | -- intersect: 104371868631.0941
[2025-10-12 12:12:35] 2025-10-12 16:12:03,254 | INFO     | intersect: 104371868631.0941
[2025-10-12 12:12:35] 2025-10-12 16:12:03,254 | INFO     | chi2: 0.10419302877174082
[2025-10-12 12:12:35] 2025-10-12 16:12:03,255 | INFO     | current chi2=0.10419302877174082 (change=93.25028898287839 %)
[2025-10-12 12:12:35] 2025-10-12 16:12:03,255 | INFO     | sum of square deviations: 274312120.0
[2025-10-12 12:12:35] 2025-10-12 16:12:03,255 | INFO     | sum of deviations: -18386352880.999996
[2025-10-12 12:12:35] 2025-10-12 16:12:03,255 | INFO     | mean x: 1760282584.5
[2025-10-12 12:12:35] 2025-10-12 16:12:03,256 | INFO     | mean y: 2647444.6458333335
[2025-10-12 12:12:35] 2025-10-12 16:12:03,256 | INFO     | -- intersect: 117989329071.74892
[2025-10-12 12:12:35] 2025-10-12 16:12:03,256 | INFO     | intersect: 117989329071.74892
[2025-10-12 12:12:35] 2025-10-12 16:12:03,256 | INFO     | chi2: 0.07973763169426613
[2025-10-12 12:12:35] 2025-10-12 16:12:03,256 | INFO     | current chi2=0.07973763169426613 (change=23.471241181643684 %)
[2025-10-12 12:12:35] 2025-10-12 16:12:03,256 | INFO     | left removable region: 20
[2025-10-12 12:12:35] 2025-10-12 16:12:03,256 | INFO     | sum of square deviations: 158737860.0
[2025-10-12 12:12:35] 2025-10-12 16:12:03,257 | INFO     | sum of deviations: -12669085150.499996
[2025-10-12 12:12:35] 2025-10-12 16:12:03,257 | INFO     | mean x: 1760282706.5
[2025-10-12 12:12:35] 2025-10-12 16:12:03,257 | INFO     | mean y: 2637305.9125
[2025-10-12 12:12:35] 2025-10-12 16:12:03,257 | INFO     | -- intersect: 140493201419.60974
[2025-10-12 12:12:35] 2025-10-12 16:12:03,257 | INFO     | intersect: 140493201419.60974
[2025-10-12 12:12:35] 2025-10-12 16:12:03,258 | INFO     | chi2: 0.06964613703478015
[2025-10-12 12:12:35] 2025-10-12 16:12:03,258 | INFO     | -- intersect: 140493201419.60974
[2025-10-12 12:12:35] 2025-10-12 16:12:03,258 | INFO     | current memory leak: -79.81 B/s (using 80 data points, chi2=0.07)
[2025-10-12 12:12:35] 2025-10-12 16:12:03,258 | INFO     | could have reported an average CPU frequency of 2078 MHz (7 samples)
[2025-10-12 12:12:35] 2025-10-12 16:12:03,259 | INFO     | ..............................
[2025-10-12 12:12:35] 2025-10-12 16:12:03,259 | INFO     | . Timing measurements:
[2025-10-12 12:12:35] 2025-10-12 16:12:03,259 | INFO     | . get job = 0 s
[2025-10-12 12:12:35] 2025-10-12 16:12:03,259 | INFO     | . initial setup = 2 s
[2025-10-12 12:12:35] 2025-10-12 16:12:03,259 | INFO     | . payload setup = 8 s
[2025-10-12 12:12:35] 2025-10-12 16:12:03,259 | INFO     | . stage-in = 0 s
[2025-10-12 12:12:35] 2025-10-12 16:12:03,259 | INFO     | . payload execution = 6436 s
[2025-10-12 12:12:35] 2025-10-12 16:12:03,259 | INFO     | . stage-out = 0 s
[2025-10-12 12:12:35] 2025-10-12 16:12:03,259 | INFO     | . log creation = 0 s
[2025-10-12 12:12:35] 2025-10-12 16:12:03,260 | INFO     | ..............................
[2025-10-12 12:12:35] 2025-10-12 16:12:03,343 | INFO     | 
[2025-10-12 12:12:35] 2025-10-12 16:12:03,343 | INFO     | job summary report
[2025-10-12 12:12:35] 2025-10-12 16:12:03,343 | INFO     | --------------------------------------------------
[2025-10-12 12:12:35] 2025-10-12 16:12:03,343 | INFO     | PanDA job id: 6839989386
[2025-10-12 12:12:35] 2025-10-12 16:12:03,344 | INFO     | task id: 46676269
[2025-10-12 12:12:35] 2025-10-12 16:12:03,344 | INFO     | errors: (none)
[2025-10-12 12:12:35] 2025-10-12 16:12:03,344 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 12:12:35] 2025-10-12 16:12:03,344 | INFO     | pilot state: finished 
[2025-10-12 12:12:35] 2025-10-12 16:12:03,344 | INFO     | transexitcode: 0
[2025-10-12 12:12:35] 2025-10-12 16:12:03,344 | INFO     | exeerrorcode: 0
[2025-10-12 12:12:35] 2025-10-12 16:12:03,345 | INFO     | exeerrordiag: 
[2025-10-12 12:12:35] 2025-10-12 16:12:03,345 | INFO     | exitcode: 0
[2025-10-12 12:12:35] 2025-10-12 16:12:03,345 | INFO     | exitmsg: OK
[2025-10-12 12:12:35] 2025-10-12 16:12:03,345 | INFO     | cpuconsumptiontime: 48061 s
[2025-10-12 12:12:35] 2025-10-12 16:12:03,345 | INFO     | nevents: 400
[2025-10-12 12:12:35] 2025-10-12 16:12:03,345 | INFO     | neventsw: 0
[2025-10-12 12:12:35] 2025-10-12 16:12:03,346 | INFO     | pid: 23346
[2025-10-12 12:12:35] 2025-10-12 16:12:03,346 | INFO     | pgrp: 23346
[2025-10-12 12:12:35] 2025-10-12 16:12:03,346 | INFO     | corecount: 8
[2025-10-12 12:12:35] 2025-10-12 16:12:03,346 | INFO     | event service: False
[2025-10-12 12:12:35] 2025-10-12 16:12:03,346 | INFO     | sizes: {0: 2348686, 1: 2348885, 6: 2349147, 11: 2349175, 6449: 2376228, 6450: 2385226, 6453: 2385410, 6460: 2385604}
[2025-10-12 12:12:35] 2025-10-12 16:12:03,346 | INFO     | --------------------------------------------------
[2025-10-12 12:12:35] 2025-10-12 16:12:03,347 | INFO     | 
[2025-10-12 12:12:35] 2025-10-12 16:12:03,347 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 12:12:35] 2025-10-12 16:12:03,375 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 12:12:35] 2025-10-12 16:12:03,375 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 12:12:35] 2025-10-12 16:12:03,375 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 12:12:35] 2025-10-12 16:12:03,376 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 12:12:35] 2025-10-12 16:12:03,376 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 12:12:35] 2025-10-12 16:12:03,376 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 12:12:35] 2025-10-12 16:12:03,376 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 12:12:35] 2025-10-12 16:12:03,376 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 12:12:35] 2025-10-12 16:12:03,377 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 12:12:35] 2025-10-12 16:12:03,377 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 12:12:35] 2025-10-12 16:12:03,377 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 12:12:35] 2025-10-12 16:12:03,377 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 12:12:35] 2025-10-12 16:12:03,377 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 12:12:35] 2025-10-12 16:12:03,377 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 12:12:35] 2025-10-12 16:12:03,378 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 12:12:35] 2025-10-12 16:12:03,378 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 12:12:35] 2025-10-12 16:12:03,378 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 12:12:35] 2025-10-12 16:12:03,378 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 12:12:35] 2025-10-12 16:12:03,378 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 12:12:35] 2025-10-12 16:12:03,379 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 12:12:35] 2025-10-12 16:12:03,379 | INFO     | job 6839989386 has completed (purged errors)
[2025-10-12 12:12:35] 2025-10-12 16:12:03,379 | INFO     | overall cleanup function is called
[2025-10-12 12:12:35] 2025-10-12 16:12:04,386 | INFO     | --- collectZombieJob: --- 10, [23346]
[2025-10-12 12:12:35] 2025-10-12 16:12:04,387 | INFO     | zombie collector waiting for pid 23346
[2025-10-12 12:12:35] 2025-10-12 16:12:04,388 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 12:12:35] 2025-10-12 16:12:04,388 | INFO     | collected zombie processes
[2025-10-12 12:12:35] 2025-10-12 16:12:04,388 | INFO     | will attempt to kill all subprocesses of pid=23346
[2025-10-12 12:12:35] 2025-10-12 16:12:04,471 | INFO     | process IDs to be killed: [23346] (in reverse order)
[2025-10-12 12:12:35] 2025-10-12 16:12:04,532 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 12:12:35] 2025-10-12 16:12:04,533 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 12:12:35] 2025-10-12 16:12:04,537 | INFO     | did not find any defunct processes belonging to 23346
[2025-10-12 12:12:35] 2025-10-12 16:12:04,540 | INFO     | did not find any defunct processes belonging to 23346
[2025-10-12 12:12:35] 2025-10-12 16:12:04,541 | INFO     | ready for new job
[2025-10-12 12:12:35] 2025-10-12 16:12:04,541 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 12:12:35] 2025-10-12 16:12:04,543 | INFO     | ***************************************
[2025-10-12 12:12:35] 2025-10-12 16:12:04,543 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 12:12:35] 2025-10-12 16:12:04,543 | INFO     | ***************************************
[2025-10-12 12:12:35] 2025-10-12 16:12:04,543 | INFO     | 
[2025-10-12 12:12:35] 2025-10-12 16:12:04,543 | INFO     | architecture information:
[2025-10-12 12:12:35] 2025-10-12 16:12:04,544 | INFO     | executing command: cat /etc/os-release
[2025-10-12 12:12:35] 2025-10-12 16:12:04,563 | INFO     | cat /etc/os-release:
[2025-10-12 12:12:35] NAME="CentOS Linux"
[2025-10-12 12:12:35] VERSION="7 (Core)"
[2025-10-12 12:12:35] ID="centos"
[2025-10-12 12:12:35] ID_LIKE="rhel fedora"
[2025-10-12 12:12:35] VERSION_ID="7"
[2025-10-12 12:12:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 12:12:35] ANSI_COLOR="0;31"
[2025-10-12 12:12:35] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 12:12:35] HOME_URL="https://www.centos.org/"
[2025-10-12 12:12:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 12:12:35] 
[2025-10-12 12:12:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 12:12:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 12:12:35] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 12:12:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 12:12:35] 
[2025-10-12 12:12:35] 2025-10-12 16:12:04,563 | INFO     | ***************************************
[2025-10-12 12:12:35] 2025-10-12 16:12:05,067 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 12:12:35] 2025-10-12 16:12:05,088 | INFO     | sufficient remaining disk space (18590203904 B)
[2025-10-12 12:12:35] 2025-10-12 16:12:05,088 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 12:12:35] 2025-10-12 16:12:05,088 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 12:12:35] 2025-10-12 16:12:05,089 | INFO     | update_server=False
[2025-10-12 12:12:35] 2025-10-12 16:12:05,089 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 12:12:35] 2025-10-12 16:12:05,089 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 12:12:35] 2025-10-12 16:12:05,209 | INFO     | all data control threads have been joined
[2025-10-12 12:12:35] 2025-10-12 16:12:05,872 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 12:12:35] 2025-10-12 16:12:06,086 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 12:12:35] 2025-10-12 16:12:06,086 | INFO     | aborting loop
[2025-10-12 12:12:35] 2025-10-12 16:12:06,095 | INFO     | [job] retrieve thread has finished
[2025-10-12 12:12:35] 2025-10-12 16:12:06,095 | INFO     | [job] queue monitor thread has finished
[2025-10-12 12:12:35] 2025-10-12 16:12:06,124 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 12:12:35] 2025-10-12 16:12:06,212 | INFO     | [data] control thread has finished
[2025-10-12 12:12:35] 2025-10-12 16:12:06,310 | INFO     | all payload control threads have been joined
[2025-10-12 12:12:35] 2025-10-12 16:12:06,546 | INFO     | all job control threads have been joined
[2025-10-12 12:12:35] 2025-10-12 16:12:06,921 | INFO     | [payload] validate_post thread has finished
[2025-10-12 12:12:35] 2025-10-12 16:12:06,964 | INFO     | [payload] failed_post thread has finished
[2025-10-12 12:12:35] 2025-10-12 16:12:07,032 | INFO     | [data] copytool_in thread has finished
[2025-10-12 12:12:35] 2025-10-12 16:12:07,092 | INFO     | [job] job monitor thread has finished
[2025-10-12 12:12:35] 2025-10-12 16:12:07,244 | INFO     | [job] validate thread has finished
[2025-10-12 12:12:35] 2025-10-12 16:12:07,316 | INFO     | [payload] control thread has finished
[2025-10-12 12:12:35] 2025-10-12 16:12:07,341 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 12:12:35] 2025-10-12 16:12:07,398 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 12:12:35] 2025-10-12 16:12:07,439 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 12:12:35] 2025-10-12 16:12:07,548 | INFO     | [job] control thread has finished
[2025-10-12 12:12:35] 2025-10-12 16:12:07,875 | INFO     | [data] copytool_out thread has finished
[2025-10-12 12:12:35] 2025-10-12 16:12:10,130 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 12:12:35] 2025-10-12 16:12:15,956 | INFO     | job.realtimelogging is not enabled
[2025-10-12 12:12:35] 2025-10-12 16:12:15,985 | INFO     | [monitor] cgroup control has ended
[2025-10-12 12:12:35] 2025-10-12 16:12:16,962 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 12:12:35] 2025-10-12 16:12:18,372 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140349896165184)>', '<ExcThread(monitor, started 140348718311168)>']
[2025-10-12 12:12:35] 2025-10-12 16:12:23,397 | INFO     | all workflow threads have been joined
[2025-10-12 12:12:35] 2025-10-12 16:12:23,398 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 12:12:35] 2025-10-12 16:12:23,398 | INFO     | traces error code: 0
[2025-10-12 12:12:35] 2025-10-12 16:12:23,399 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 12:12:35] 2025-10-12 16:12:35,495 | INFO     | PID=16994 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 12:12:35] 2025-10-12 16:12:35,496 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 12:12:35] 2025-10-12 16:12:35,496 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 12:12:35] 2025-10-12 16:12:35,496 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 12:12:35] 2025-10-12 16:12:35,497 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 12:12:35] 2025-10-12 16:12:35,497 | CRITICAL | thread 'MainThread' is not alive
[2025-10-12 12:12:35] 2025-10-12 16:12:35,497 | INFO     | [monitor] control thread has ended
[2025-10-12 12:12:35] 2025-10-12 16:12:35,618 [wrapper] ==== pilot stdout END ====
[2025-10-12 12:12:35] 2025-10-12 16:12:35,623 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 12:12:35] 2025-10-12 16:12:35,628 [wrapper] pilotpid: 16994
[2025-10-12 12:12:35] 2025-10-12 16:12:35,632 [wrapper] Pilot exit status: 0
[2025-10-12 12:12:35] 2025-10-12 16:12:35,653 [wrapper] pandaids: 6839989386
[2025-10-12 12:12:35] 2025-10-12 16:12:35,697 [wrapper] cleanup supervisor_pilot 28711 16995
[2025-10-12 12:12:35] 2025-10-12 16:12:35,703 [wrapper] Test setup, not cleaning
[2025-10-12 12:12:35] 2025-10-12 16:12:35,708 [wrapper] apfmon messages muted
[2025-10-12 12:12:35] 2025-10-12 16:12:35,712 [wrapper] ==== wrapper stdout END ====
[2025-10-12 12:12:35] 2025-10-12 16:12:35,716 [wrapper] ==== wrapper stderr END ====
[2025-10-12 12:12:35]  *** Error codes and diagnostics ***
[2025-10-12 12:12:35]     "exeErrorCode": 0,
[2025-10-12 12:12:35]     "exeErrorDiag": "",
[2025-10-12 12:12:35]     "pilotErrorCode": 0,
[2025-10-12 12:12:35]     "pilotErrorDiag": "",
[2025-10-12 12:12:35]  *** Listing of results directory ***
[2025-10-12 12:12:35] total 410408
[2025-10-12 12:12:35] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 08:35 pilot3.tar.gz
[2025-10-12 12:12:35] -rwx------ 1 boincer umatlas     36292 Oct 12 08:53 runpilot2-wrapper.sh
[2025-10-12 12:12:35] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 08:53 queuedata.json
[2025-10-12 12:12:35] -rw-r--r-- 1 boincer umatlas       100 Oct 12 10:23 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 12:12:35] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 10:23 run_atlas
[2025-10-12 12:12:35] -rw-r--r-- 1 boincer umatlas       105 Oct 12 10:23 job.xml
[2025-10-12 12:12:35] -rw-r--r-- 2 boincer umatlas 221448842 Oct 12 10:23 EVNT.46676267._003830.pool.root.1
[2025-10-12 12:12:35] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 10:23 start_atlas.sh
[2025-10-12 12:12:35] drwxrwx--x 2 boincer umatlas      4096 Oct 12 10:23 shared
[2025-10-12 12:12:35] -rw-r--r-- 2 boincer umatlas    569678 Oct 12 10:23 input.tar.gz
[2025-10-12 12:12:35] -rw-r--r-- 1 boincer umatlas         0 Oct 12 10:23 boinc_lockfile
[2025-10-12 12:12:35] -rw-r--r-- 1 boincer umatlas      2550 Oct 12 10:23 pandaJob.out
[2025-10-12 12:12:35] -rw------- 1 boincer umatlas    975528 Oct 12 10:24 agis_schedconf.cvmfs.json
[2025-10-12 12:12:35] -rw------- 1 boincer umatlas   1560580 Oct 12 10:24 agis_ddmendpoints.agis.ALL.json
[2025-10-12 12:12:35] drwx------ 5 boincer umatlas      4096 Oct 12 10:24 pilot3
[2025-10-12 12:12:35] -rw-r--r-- 1 boincer umatlas      5908 Oct 12 12:11 init_data.xml
[2025-10-12 12:12:35] -rw-r--r-- 1 boincer umatlas       530 Oct 12 12:11 boinc_task_state.xml
[2025-10-12 12:12:35] -rw------- 1 boincer umatlas 192381235 Oct 12 12:11 HITS.46676269._078759.pool.root.1
[2025-10-12 12:12:35] -rw------- 1 boincer umatlas      1049 Oct 12 12:11 memory_monitor_summary.json
[2025-10-12 12:12:35] -rw------- 1 boincer umatlas    342090 Oct 12 12:11 log.46676269._078759.job.log.tgz.1
[2025-10-12 12:12:35] -rw------- 1 boincer umatlas      7849 Oct 12 12:12 heartbeat.json
[2025-10-12 12:12:35] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 12:12 boinc_mmap_file
[2025-10-12 12:12:35] -rw-r--r-- 1 boincer umatlas        27 Oct 12 12:12 wrapper_checkpoint.txt
[2025-10-12 12:12:35] -rw------- 1 boincer umatlas        95 Oct 12 12:12 pilot_heartbeat.json
[2025-10-12 12:12:35] -rw------- 1 boincer umatlas       815 Oct 12 12:12 pilotlog.txt
[2025-10-12 12:12:35] -rw------- 1 boincer umatlas    920144 Oct 12 12:12 log.46676269._078759.job.log.1
[2025-10-12 12:12:35] -rw------- 1 boincer umatlas       357 Oct 12 12:12 output.list
[2025-10-12 12:12:35] -rw-r--r-- 1 boincer umatlas       620 Oct 12 12:12 runtime_log
[2025-10-12 12:12:35] -rw------- 1 boincer umatlas   1280000 Oct 12 12:12 result.tar.gz
[2025-10-12 12:12:35] -rw-r--r-- 1 boincer umatlas      8698 Oct 12 12:12 runtime_log.err
[2025-10-12 12:12:35] -rw------- 1 boincer umatlas       657 Oct 12 12:12 FpEMDm9kAS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmptjNDmY5LuPo.diag
[2025-10-12 12:12:35] -rw-r--r-- 1 boincer umatlas     21065 Oct 12 12:12 stderr.txt
[2025-10-12 12:12:35] HITS file was successfully produced:
[2025-10-12 12:12:35] -rw------- 1 boincer umatlas 192381235 Oct 12 12:11 shared/HITS.pool.root.1
[2025-10-12 12:12:35]  *** Contents of shared directory: ***
[2025-10-12 12:12:35] total 405972
[2025-10-12 12:12:35] -rw-r--r-- 2 boincer umatlas 221448842 Oct 12 10:23 ATLAS.root_0
[2025-10-12 12:12:35] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 10:23 start_atlas.sh
[2025-10-12 12:12:35] -rw-r--r-- 2 boincer umatlas    569678 Oct 12 10:23 input.tar.gz
[2025-10-12 12:12:35] -rw------- 1 boincer umatlas 192381235 Oct 12 12:11 HITS.pool.root.1
[2025-10-12 12:12:35] -rw------- 1 boincer umatlas   1280000 Oct 12 12:12 result.tar.gz
12:12:37 (13274): run_atlas exited; CPU time 48058.771650
12:12:37 (13274): called boinc_finish(0)

</stderr_txt>
]]>

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