Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:47:03 (27936): wrapper (7.7.26015): starting
00:47:03 (27936): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 00:47:03] Arguments: --nthreads 8
[2025-10-13 00:47:03] Threads: 8
[2025-10-13 00:47:03] Checking for CVMFS
[2025-10-13 00:47:03] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 00:47:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 00:47:04] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 00:47:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 00:47:05] 2.11.2.0 21130 221015 137912 151640 0 61 22563864 25165824 4632 130560 0 114091483 99.867 65553393 3104 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-10-13 00:47:05] CVMFS is ok
[2025-10-13 00:47:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 00:47:05] Checking for apptainer binary...
[2025-10-13 00:47:05] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 00:47:05] Running /usr/bin/apptainer --version
[2025-10-13 00:47:05] apptainer version 1.3.2-1.el7
[2025-10-13 00:47:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 00:47:12] cg-vwn411.simple-grid.lan
[2025-10-13 00:47:12] apptainer works
[2025-10-13 00:47:12] Set ATHENA_PROC_NUMBER=8
[2025-10-13 00:47:12] Set ATHENA_CORE_NUMBER=8
[2025-10-13 00:47:12] Starting ATLAS job with PandaID=6839989412
[2025-10-13 00:47:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 05:14:42]  *** The last 200 lines of the pilot log: ***
[2025-10-13 05:14:42] 2025-10-13 03:13:45,289 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 05:14:42] 2025-10-13 03:13:45,289 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 05:14:42] 2025-10-13 03:13:45,294 | INFO     | fitting pss+swap vs Time
[2025-10-13 05:14:42] 2025-10-13 03:13:45,295 | INFO     | sum of square deviations: 4787066500.0
[2025-10-13 05:14:42] 2025-10-13 03:13:45,297 | INFO     | sum of deviations: 101627438197.0
[2025-10-13 05:14:42] 2025-10-13 03:13:45,297 | INFO     | mean x: 1760317507.0
[2025-10-13 05:14:42] 2025-10-13 03:13:45,297 | INFO     | mean y: 2436478.4176706825
[2025-10-13 05:14:42] 2025-10-13 03:13:45,297 | INFO     | -- intersect: -37368374779.32015
[2025-10-13 05:14:42] 2025-10-13 03:13:45,297 | INFO     | intersect: -37368374779.32015
[2025-10-13 05:14:42] 2025-10-13 03:13:45,298 | INFO     | chi2: 6.299780081540748
[2025-10-13 05:14:42] 2025-10-13 03:13:45,298 | INFO     | sum of square deviations: 4504437945.0
[2025-10-13 05:14:42] 2025-10-13 03:13:45,305 | INFO     | sum of deviations: 116153139477.5
[2025-10-13 05:14:42] 2025-10-13 03:13:45,306 | INFO     | mean x: 1760317354.5
[2025-10-13 05:14:42] 2025-10-13 03:13:45,306 | INFO     | mean y: 2444166.8401639345
[2025-10-13 05:14:42] 2025-10-13 03:13:45,306 | INFO     | -- intersect: -45389764516.79002
[2025-10-13 05:14:42] 2025-10-13 03:13:45,306 | INFO     | intersect: -45389764516.79002
[2025-10-13 05:14:42] 2025-10-13 03:13:45,306 | INFO     | chi2: 5.534267558987348
[2025-10-13 05:14:42] 2025-10-13 03:13:45,307 | INFO     | current chi2=5.534267558987348 (change=12.151416599389881 %)
[2025-10-13 05:14:42] 2025-10-13 03:13:45,307 | INFO     | right removable region: 243
[2025-10-13 05:14:42] 2025-10-13 03:13:45,307 | INFO     | sum of square deviations: 4504437945.0
[2025-10-13 05:14:42] 2025-10-13 03:13:45,309 | INFO     | sum of deviations: 15648235267.0
[2025-10-13 05:14:42] 2025-10-13 03:13:45,309 | INFO     | mean x: 1760317659.5
[2025-10-13 05:14:42] 2025-10-13 03:13:45,309 | INFO     | mean y: 2482834.893442623
[2025-10-13 05:14:42] 2025-10-13 03:13:45,310 | INFO     | -- intersect: -6112789529.1286125
[2025-10-13 05:14:42] 2025-10-13 03:13:45,310 | INFO     | intersect: -6112789529.1286125
[2025-10-13 05:14:42] 2025-10-13 03:13:45,310 | INFO     | chi2: 1.6151405199738993
[2025-10-13 05:14:42] 2025-10-13 03:13:45,310 | INFO     | current chi2=1.6151405199738993 (change=74.36195392428871 %)
[2025-10-13 05:14:42] 2025-10-13 03:13:45,311 | INFO     | sum of square deviations: 4233158440.0
[2025-10-13 05:14:42] 2025-10-13 03:13:45,312 | INFO     | sum of deviations: -12705276969.0
[2025-10-13 05:14:42] 2025-10-13 03:13:45,313 | INFO     | mean x: 1760317812.0
[2025-10-13 05:14:42] 2025-10-13 03:13:45,313 | INFO     | mean y: 2498639.8158995816
[2025-10-13 05:14:42] 2025-10-13 03:13:45,313 | INFO     | -- intersect: 5285864635.189339
[2025-10-13 05:14:42] 2025-10-13 03:13:45,313 | INFO     | intersect: 5285864635.189339
[2025-10-13 05:14:42] 2025-10-13 03:13:45,314 | INFO     | chi2: 0.875959953812704
[2025-10-13 05:14:42] 2025-10-13 03:13:45,314 | INFO     | current chi2=0.875959953812704 (change=45.76571245783249 %)
[2025-10-13 05:14:42] 2025-10-13 03:13:45,314 | INFO     | sum of square deviations: 3972995422.5
[2025-10-13 05:14:42] 2025-10-13 03:13:45,316 | INFO     | sum of deviations: -7193085901.000004
[2025-10-13 05:14:42] 2025-10-13 03:13:45,316 | INFO     | mean x: 1760317964.5
[2025-10-13 05:14:42] 2025-10-13 03:13:45,316 | INFO     | mean y: 2495385.418803419
[2025-10-13 05:14:42] 2025-10-13 03:13:45,316 | INFO     | -- intersect: 3189541174.601807
[2025-10-13 05:14:42] 2025-10-13 03:13:45,317 | INFO     | intersect: 3189541174.601807
[2025-10-13 05:14:42] 2025-10-13 03:13:45,317 | INFO     | chi2: 0.8467305014035867
[2025-10-13 05:14:42] 2025-10-13 03:13:45,317 | INFO     | current chi2=0.8467305014035867 (change=3.3368480239185696 %)
[2025-10-13 05:14:42] 2025-10-13 03:13:45,317 | INFO     | left removable region: 30
[2025-10-13 05:14:42] 2025-10-13 03:13:45,318 | INFO     | sum of square deviations: 2996454322.0
[2025-10-13 05:14:42] 2025-10-13 03:13:45,319 | INFO     | sum of deviations: 6415852449.0
[2025-10-13 05:14:42] 2025-10-13 03:13:45,319 | INFO     | mean x: 1760318239.0
[2025-10-13 05:14:42] 2025-10-13 03:13:45,320 | INFO     | mean y: 2506252.896713615
[2025-10-13 05:14:42] 2025-10-13 03:13:45,320 | INFO     | -- intersect: -3766595782.7282825
[2025-10-13 05:14:42] 2025-10-13 03:13:45,320 | INFO     | intersect: -3766595782.7282825
[2025-10-13 05:14:42] 2025-10-13 03:13:45,320 | INFO     | chi2: 0.0009003009911656277
[2025-10-13 05:14:42] 2025-10-13 03:13:45,320 | INFO     | -- intersect: -3766595782.7282825
[2025-10-13 05:14:42] 2025-10-13 03:13:45,320 | INFO     | current memory leak: 2.14 B/s (using 213 data points, chi2=0.00)
[2025-10-13 05:14:42] 2025-10-13 03:13:45,321 | INFO     | could have reported an average CPU frequency of 1999 MHz (12 samples)
[2025-10-13 05:14:42] 2025-10-13 03:13:45,321 | INFO     | ..............................
[2025-10-13 05:14:42] 2025-10-13 03:13:45,322 | INFO     | . Timing measurements:
[2025-10-13 05:14:42] 2025-10-13 03:13:45,322 | INFO     | . get job = 0 s
[2025-10-13 05:14:42] 2025-10-13 03:13:45,322 | INFO     | . initial setup = 9 s
[2025-10-13 05:14:42] 2025-10-13 03:13:45,322 | INFO     | . payload setup = 133 s
[2025-10-13 05:14:42] 2025-10-13 03:13:45,322 | INFO     | . stage-in = 0 s
[2025-10-13 05:14:42] 2025-10-13 03:13:45,322 | INFO     | . payload execution = 15337 s
[2025-10-13 05:14:42] 2025-10-13 03:13:45,322 | INFO     | . stage-out = 3 s
[2025-10-13 05:14:42] 2025-10-13 03:13:45,328 | INFO     | . log creation = 1 s
[2025-10-13 05:14:42] 2025-10-13 03:13:45,329 | INFO     | ..............................
[2025-10-13 05:14:42] 2025-10-13 03:13:45,461 | INFO     | 
[2025-10-13 05:14:42] 2025-10-13 03:13:45,461 | INFO     | job summary report
[2025-10-13 05:14:42] 2025-10-13 03:13:45,461 | INFO     | --------------------------------------------------
[2025-10-13 05:14:42] 2025-10-13 03:13:45,461 | INFO     | PanDA job id: 6839989412
[2025-10-13 05:14:42] 2025-10-13 03:13:45,461 | INFO     | task id: 46676269
[2025-10-13 05:14:42] 2025-10-13 03:13:45,461 | INFO     | errors: (none)
[2025-10-13 05:14:42] 2025-10-13 03:13:45,462 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 05:14:42] 2025-10-13 03:13:45,462 | INFO     | pilot state: finished 
[2025-10-13 05:14:42] 2025-10-13 03:13:45,462 | INFO     | transexitcode: 0
[2025-10-13 05:14:42] 2025-10-13 03:13:45,462 | INFO     | exeerrorcode: 0
[2025-10-13 05:14:42] 2025-10-13 03:13:45,462 | INFO     | exeerrordiag: 
[2025-10-13 05:14:42] 2025-10-13 03:13:45,462 | INFO     | exitcode: 0
[2025-10-13 05:14:42] 2025-10-13 03:13:45,462 | INFO     | exitmsg: OK
[2025-10-13 05:14:42] 2025-10-13 03:13:45,462 | INFO     | cpuconsumptiontime: 58310 s
[2025-10-13 05:14:42] 2025-10-13 03:13:45,462 | INFO     | nevents: 400
[2025-10-13 05:14:42] 2025-10-13 03:13:45,462 | INFO     | neventsw: 0
[2025-10-13 05:14:42] 2025-10-13 03:13:45,462 | INFO     | pid: 5853
[2025-10-13 05:14:42] 2025-10-13 03:13:45,463 | INFO     | pgrp: 5853
[2025-10-13 05:14:42] 2025-10-13 03:13:45,463 | INFO     | corecount: 8
[2025-10-13 05:14:42] 2025-10-13 03:13:45,463 | INFO     | event service: False
[2025-10-13 05:14:42] 2025-10-13 03:13:45,463 | INFO     | sizes: {0: 2348686, 1: 2348885, 12: 2348885, 23: 2348913, 34: 2348941, 44: 2348969, 55: 2349125, 66: 2349153, 76: 2349181, 87: 2349237, 92: 2349527, 98: 2349835, 1
[2025-10-13 05:14:42] 2025-10-13 03:13:45,463 | INFO     | --------------------------------------------------
[2025-10-13 05:14:42] 2025-10-13 03:13:45,463 | INFO     | 
[2025-10-13 05:14:42] 2025-10-13 03:13:45,463 | INFO     | executing command: ls -lF /var/lib/boinc/slots/8
[2025-10-13 05:14:42] 2025-10-13 03:13:45,912 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 05:14:42] 2025-10-13 03:13:45,912 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 05:14:42] 2025-10-13 03:13:45,912 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 05:14:42] 2025-10-13 03:13:45,912 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 05:14:42] 2025-10-13 03:13:45,913 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 05:14:42] 2025-10-13 03:13:45,913 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 05:14:42] 2025-10-13 03:13:45,913 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 05:14:42] 2025-10-13 03:13:45,913 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 05:14:42] 2025-10-13 03:13:45,913 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 05:14:42] 2025-10-13 03:13:45,913 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 05:14:42] 2025-10-13 03:13:45,913 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 05:14:42] 2025-10-13 03:13:45,913 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 05:14:42] 2025-10-13 03:13:45,913 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 05:14:42] 2025-10-13 03:13:45,913 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 05:14:42] 2025-10-13 03:13:45,913 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 05:14:42] 2025-10-13 03:13:45,914 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 05:14:42] 2025-10-13 03:13:45,914 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 05:14:42] 2025-10-13 03:13:45,914 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 05:14:42] 2025-10-13 03:13:45,914 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 05:14:42] 2025-10-13 03:13:45,914 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 05:14:42] 2025-10-13 03:13:45,914 | INFO     | job 6839989412 has completed (purged errors)
[2025-10-13 05:14:42] 2025-10-13 03:13:45,914 | INFO     | overall cleanup function is called
[2025-10-13 05:14:42] 2025-10-13 03:13:46,923 | INFO     | --- collectZombieJob: --- 10, [5853]
[2025-10-13 05:14:42] 2025-10-13 03:13:46,924 | INFO     | zombie collector waiting for pid 5853
[2025-10-13 05:14:42] 2025-10-13 03:13:46,924 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 05:14:42] 2025-10-13 03:13:46,924 | INFO     | collected zombie processes
[2025-10-13 05:14:42] 2025-10-13 03:13:46,924 | INFO     | will attempt to kill all subprocesses of pid=5853
[2025-10-13 05:14:42] 2025-10-13 03:13:47,041 | INFO     | process IDs to be killed: [5853] (in reverse order)
[2025-10-13 05:14:42] 2025-10-13 03:13:47,947 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 05:14:42] 2025-10-13 03:13:47,948 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 05:14:42] 2025-10-13 03:13:47,952 | INFO     | did not find any defunct processes belonging to 5853
[2025-10-13 05:14:42] 2025-10-13 03:13:47,955 | INFO     | did not find any defunct processes belonging to 5853
[2025-10-13 05:14:42] 2025-10-13 03:13:47,955 | INFO     | ready for new job
[2025-10-13 05:14:42] 2025-10-13 03:13:47,956 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 05:14:42] 2025-10-13 03:13:47,958 | INFO     | ***************************************
[2025-10-13 05:14:42] 2025-10-13 03:13:47,958 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 05:14:42] 2025-10-13 03:13:47,958 | INFO     | ***************************************
[2025-10-13 05:14:42] 2025-10-13 03:13:47,958 | INFO     | 
[2025-10-13 05:14:42] 2025-10-13 03:13:47,959 | INFO     | pilot is running in a VM
[2025-10-13 05:14:42] 2025-10-13 03:13:47,959 | INFO     | architecture information:
[2025-10-13 05:14:42] 2025-10-13 03:13:47,964 | INFO     | executing command: cat /etc/os-release
[2025-10-13 05:14:42] 2025-10-13 03:13:48,087 | INFO     | cat /etc/os-release:
[2025-10-13 05:14:42] NAME="CentOS Linux"
[2025-10-13 05:14:42] VERSION="7 (Core)"
[2025-10-13 05:14:42] ID="centos"
[2025-10-13 05:14:42] ID_LIKE="rhel fedora"
[2025-10-13 05:14:42] VERSION_ID="7"
[2025-10-13 05:14:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 05:14:42] ANSI_COLOR="0;31"
[2025-10-13 05:14:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 05:14:42] HOME_URL="https://www.centos.org/"
[2025-10-13 05:14:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 05:14:42] 
[2025-10-13 05:14:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 05:14:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 05:14:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 05:14:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 05:14:42] 
[2025-10-13 05:14:42] 2025-10-13 03:13:48,087 | INFO     | ***************************************
[2025-10-13 05:14:42] 2025-10-13 03:13:48,590 | INFO     | executing command: df -mP /var/lib/boinc/slots/8
[2025-10-13 05:14:42] 2025-10-13 03:13:48,846 | INFO     | sufficient remaining disk space (495386099712 B)
[2025-10-13 05:14:42] 2025-10-13 03:13:48,846 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 05:14:42] 2025-10-13 03:13:48,846 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 05:14:42] 2025-10-13 03:13:48,847 | INFO     | update_server=False
[2025-10-13 05:14:42] 2025-10-13 03:13:48,847 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 05:14:42] 2025-10-13 03:13:48,847 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 05:14:42] 2025-10-13 03:13:48,847 | INFO     | aborting loop
[2025-10-13 05:14:42] 2025-10-13 03:13:48,851 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 05:14:42] 2025-10-13 03:13:49,464 | INFO     | all data control threads have been joined
[2025-10-13 05:14:42] 2025-10-13 03:13:49,857 | INFO     | [job] job monitor thread has finished
[2025-10-13 05:14:42] 2025-10-13 03:13:49,857 | INFO     | [job] retrieve thread has finished
[2025-10-13 05:14:42] 2025-10-13 03:13:49,895 | INFO     | [data] copytool_in thread has finished
[2025-10-13 05:14:42] 2025-10-13 03:13:49,973 | INFO     | all payload control threads have been joined
[2025-10-13 05:14:42] 2025-10-13 03:13:50,114 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 05:14:42] 2025-10-13 03:13:50,446 | INFO     | all job control threads have been joined
[2025-10-13 05:14:42] 2025-10-13 03:13:50,470 | INFO     | [data] control thread has finished
[2025-10-13 05:14:42] 2025-10-13 03:13:50,475 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 05:14:42] 2025-10-13 03:13:50,558 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 05:14:42] 2025-10-13 03:13:50,856 | INFO     | [payload] validate_post thread has finished
[2025-10-13 05:14:42] 2025-10-13 03:13:50,858 | INFO     | [data] copytool_out thread has finished
[2025-10-13 05:14:42] 2025-10-13 03:13:50,864 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 05:14:42] 2025-10-13 03:13:50,979 | INFO     | [payload] control thread has finished
[2025-10-13 05:14:42] 2025-10-13 03:13:50,989 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 05:14:42] 2025-10-13 03:13:51,078 | INFO     | [job] validate thread has finished
[2025-10-13 05:14:42] 2025-10-13 03:13:51,093 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 05:14:42] 2025-10-13 03:13:51,276 | INFO     | [payload] failed_post thread has finished
[2025-10-13 05:14:42] 2025-10-13 03:13:51,453 | INFO     | [job] control thread has finished
[2025-10-13 05:14:42] 2025-10-13 03:13:51,480 | INFO     | [job] queue monitor thread has finished
[2025-10-13 05:14:42] 2025-10-13 03:13:54,998 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 05:14:42] 2025-10-13 03:14:17,299 | INFO     | PID=31685 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-13 05:14:42] 2025-10-13 03:14:17,299 | INFO     | .. there are 9 such processes running
[2025-10-13 05:14:42] 2025-10-13 03:14:17,301 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 05:14:42] 2025-10-13 03:14:17,301 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 05:14:42] 2025-10-13 03:14:17,301 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 05:14:42] 2025-10-13 03:14:30,415 | INFO     | [monitor] cgroup control has ended
[2025-10-13 05:14:42] 2025-10-13 03:14:32,413 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139774100858688)>', '<ExcThread(monitor, started 139773511452416)>']
[2025-10-13 05:14:42] 2025-10-13 03:14:33,397 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 05:14:42] 2025-10-13 03:14:33,398 | INFO     | [monitor] control thread has ended
[2025-10-13 05:14:42] 2025-10-13 03:14:37,439 | INFO     | all workflow threads have been joined
[2025-10-13 05:14:42] 2025-10-13 03:14:37,440 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 05:14:42] 2025-10-13 03:14:37,440 | INFO     | traces error code: 0
[2025-10-13 05:14:42] 2025-10-13 03:14:37,440 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 05:14:42] 2025-10-13 03:14:37,773 [wrapper] ==== pilot stdout END ====
[2025-10-13 05:14:42] 2025-10-13 03:14:37,804 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 05:14:42] 2025-10-13 03:14:37,843 [wrapper] pilotpid: 31685
[2025-10-13 05:14:42] 2025-10-13 03:14:37,930 [wrapper] Pilot exit status: 0
[2025-10-13 05:14:42] 2025-10-13 03:14:38,369 [wrapper] pandaids: 6839989412
[2025-10-13 05:14:42] 2025-10-13 03:14:39,386 [wrapper] cleanup supervisor_pilot 32565 31686
[2025-10-13 05:14:42] 2025-10-13 03:14:39,520 [wrapper] Test setup, not cleaning
[2025-10-13 05:14:42] 2025-10-13 03:14:39,634 [wrapper] apfmon messages muted
[2025-10-13 05:14:42] 2025-10-13 03:14:39,747 [wrapper] ==== wrapper stdout END ====
[2025-10-13 05:14:42] 2025-10-13 03:14:39,839 [wrapper] ==== wrapper stderr END ====
[2025-10-13 05:14:42]  *** Error codes and diagnostics ***
[2025-10-13 05:14:42]     "exeErrorCode": 0,
[2025-10-13 05:14:42]     "exeErrorDiag": "",
[2025-10-13 05:14:42]     "pilotErrorCode": 0,
[2025-10-13 05:14:42]     "pilotErrorDiag": "",
[2025-10-13 05:14:42]  *** Listing of results directory ***
[2025-10-13 05:14:42] total 424824
[2025-10-13 05:14:42] -rw-r--r--. 1 boinc boinc    557409 Oct 12 14:35 pilot3.tar.gz
[2025-10-13 05:14:42] -rwx------. 1 boinc boinc     36292 Oct 12 14:53 runpilot2-wrapper.sh
[2025-10-13 05:14:42] -rw-r--r--. 1 boinc boinc      5112 Oct 12 14:53 queuedata.json
[2025-10-13 05:14:42] -rw-r--r--. 1 boinc boinc       100 Oct 13 00:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 05:14:42] -rwxr-xr-x. 1 boinc boinc      7986 Oct 13 00:47 run_atlas
[2025-10-13 05:14:42] -rw-r--r--. 1 boinc boinc       105 Oct 13 00:47 job.xml
[2025-10-13 05:14:42] -rw-r--r--. 2 boinc boinc 222044979 Oct 13 00:47 EVNT.46676267._003831.pool.root.1
[2025-10-13 05:14:42] -rw-r--r--. 2 boinc boinc     15120 Oct 13 00:47 start_atlas.sh
[2025-10-13 05:14:42] drwxrwx--x. 2 boinc boinc        68 Oct 13 00:47 shared
[2025-10-13 05:14:42] -rw-r--r--. 2 boinc boinc    569676 Oct 13 00:47 input.tar.gz
[2025-10-13 05:14:42] -rw-r--r--. 1 boinc boinc      6390 Oct 13 00:47 init_data.xml
[2025-10-13 05:14:42] -rw-r--r--. 1 boinc boinc         0 Oct 13 00:47 boinc_lockfile
[2025-10-13 05:14:42] -rw-r--r--. 1 boinc boinc      2550 Oct 13 00:47 pandaJob.out
[2025-10-13 05:14:42] -rw-------. 1 boinc boinc    975603 Oct 13 00:50 agis_schedconf.cvmfs.json
[2025-10-13 05:14:42] drwx------. 5 boinc boinc      4096 Oct 13 00:51 pilot3
[2025-10-13 05:14:42] -rw-------. 1 boinc boinc 203942225 Oct 13 05:10 HITS.46676269._078785.pool.root.1
[2025-10-13 05:14:42] -rw-r--r--. 1 boinc boinc       531 Oct 13 05:11 boinc_task_state.xml
[2025-10-13 05:14:42] -rw-------. 1 boinc boinc      1016 Oct 13 05:12 memory_monitor_summary.json
[2025-10-13 05:14:42] -rw-------. 1 boinc boinc   1560580 Oct 13 05:12 agis_ddmendpoints.agis.ALL.json
[2025-10-13 05:14:42] -rw-------. 1 boinc boinc    464218 Oct 13 05:12 log.46676269._078785.job.log.tgz.1
[2025-10-13 05:14:42] -rw-------. 1 boinc boinc      7778 Oct 13 05:13 heartbeat.json
[2025-10-13 05:14:42] -rw-------. 1 boinc boinc        95 Oct 13 05:14 pilot_heartbeat.json
[2025-10-13 05:14:42] -rw-r--r--. 1 boinc boinc      8192 Oct 13 05:14 boinc_mmap_file
[2025-10-13 05:14:42] -rw-r--r--. 1 boinc boinc        28 Oct 13 05:14 wrapper_checkpoint.txt
[2025-10-13 05:14:42] -rw-------. 1 boinc boinc      4884 Oct 13 05:14 pilotlog.txt
[2025-10-13 05:14:42] -rw-------. 1 boinc boinc   2104315 Oct 13 05:14 log.46676269._078785.job.log.1
[2025-10-13 05:14:42] -rw-------. 1 boinc boinc       357 Oct 13 05:14 output.list
[2025-10-13 05:14:42] -rw-r--r--. 1 boinc boinc       620 Oct 13 05:14 runtime_log
[2025-10-13 05:14:42] -rw-------. 1 boinc boinc   2590720 Oct 13 05:14 result.tar.gz
[2025-10-13 05:14:42] -rw-------. 1 boinc boinc       656 Oct 13 05:14 u8ENDm9kAS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmEujNDmp64jRn.diag
[2025-10-13 05:14:42] -rw-r--r--. 1 boinc boinc      8703 Oct 13 05:14 runtime_log.err
[2025-10-13 05:14:42] -rw-r--r--. 1 boinc boinc     20593 Oct 13 05:14 stderr.txt
[2025-10-13 05:14:42] HITS file was successfully produced:
[2025-10-13 05:14:42] -rw-------. 1 boinc boinc 203942225 Oct 13 05:10 shared/HITS.pool.root.1
[2025-10-13 05:14:42]  *** Contents of shared directory: ***
[2025-10-13 05:14:42] total 419116
[2025-10-13 05:14:42] -rw-r--r--. 2 boinc boinc 222044979 Oct 13 00:47 ATLAS.root_0
[2025-10-13 05:14:42] -rw-r--r--. 2 boinc boinc     15120 Oct 13 00:47 start_atlas.sh
[2025-10-13 05:14:42] -rw-r--r--. 2 boinc boinc    569676 Oct 13 00:47 input.tar.gz
[2025-10-13 05:14:42] -rw-------. 1 boinc boinc 203942225 Oct 13 05:10 HITS.pool.root.1
[2025-10-13 05:14:42] -rw-------. 1 boinc boinc   2590720 Oct 13 05:14 result.tar.gz
05:14:44 (27936): run_atlas exited; CPU time 58540.024439
05:14:44 (27936): called boinc_finish(0)

</stderr_txt>
]]>

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