Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
10:19:56 (5235): wrapper (7.7.26015): starting
10:19:56 (5235): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 10:19:56] Arguments: --nthreads 8
[2025-10-12 10:19:56] Threads: 8
[2025-10-12 10:19:56] Checking for CVMFS
[2025-10-12 10:19:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 10:19:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 10:19:57] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 10:19:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 10:19:57] 2.11.2.0 2800 222994 119568 151623 3 56 14207593 20275201 1 130560 1 79061762 99.974 14677640 12659 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 10:19:57] CVMFS is ok
[2025-10-12 10:19:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 10:19:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 10:19:57] Further information can be found at the LHC@home message board.
[2025-10-12 10:19:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 10:19:57] Checking for apptainer binary...
[2025-10-12 10:19:57] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 10:19:57] Running /usr/bin/apptainer --version
[2025-10-12 10:19:57] apptainer version 1.3.2-1.el7
[2025-10-12 10:19:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 10:19:58] c-204-36.aglt2.org
[2025-10-12 10:19:58] apptainer works
[2025-10-12 10:19:58] Set ATHENA_PROC_NUMBER=8
[2025-10-12 10:19:58] Set ATHENA_CORE_NUMBER=8
[2025-10-12 10:19:58] Starting ATLAS job with PandaID=6839821987
[2025-10-12 10:19:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 12:35:34]  *** The last 200 lines of the pilot log: ***
[2025-10-12 12:35:34] 2025-10-12 16:34:52,134 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 12:35:34] 2025-10-12 16:34:52,198 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-12 12:35:34] 2025-10-12 16:34:52,201 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1695.875
[2025-10-12 12:35:34] 2025-10-12 16:34:52,203 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6839821987/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 12:35:34] 2025-10-12 16:34:52,204 | INFO     | extracted standard info from prmon json
[2025-10-12 12:35:34] 2025-10-12 16:34:52,204 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 12:35:34] 2025-10-12 16:34:52,205 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 12:35:34] 2025-10-12 16:34:52,205 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 12:35:34] 2025-10-12 16:34:52,205 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 12:35:34] 2025-10-12 16:34:52,209 | INFO     | fitting pss+swap vs Time
[2025-10-12 12:35:34] 2025-10-12 16:34:52,209 | INFO     | sum of square deviations: 713140813.0
[2025-10-12 12:35:34] 2025-10-12 16:34:52,210 | INFO     | sum of deviations: -7978376446.5
[2025-10-12 12:35:34] 2025-10-12 16:34:52,210 | INFO     | mean x: 1760282841.5
[2025-10-12 12:35:34] 2025-10-12 16:34:52,210 | INFO     | mean y: 2564205.522727273
[2025-10-12 12:35:34] 2025-10-12 16:34:52,210 | INFO     | -- intersect: 19696008902.25991
[2025-10-12 12:35:34] 2025-10-12 16:34:52,210 | INFO     | intersect: 19696008902.25991
[2025-10-12 12:35:34] 2025-10-12 16:34:52,211 | INFO     | chi2: 1.7535934145764729
[2025-10-12 12:35:34] 2025-10-12 16:34:52,211 | INFO     | sum of square deviations: 635130048.0
[2025-10-12 12:35:34] 2025-10-12 16:34:52,211 | INFO     | sum of deviations: -6740692393.999996
[2025-10-12 12:35:34] 2025-10-12 16:34:52,212 | INFO     | mean x: 1760282689.0
[2025-10-12 12:35:34] 2025-10-12 16:34:52,212 | INFO     | mean y: 2566622.3543307087
[2025-10-12 12:35:34] 2025-10-12 16:34:52,212 | INFO     | -- intersect: 18684605317.258213
[2025-10-12 12:35:34] 2025-10-12 16:34:52,212 | INFO     | intersect: 18684605317.258213
[2025-10-12 12:35:34] 2025-10-12 16:34:52,212 | INFO     | chi2: 1.7550510940735824
[2025-10-12 12:35:34] 2025-10-12 16:34:52,212 | INFO     | current chi2=1.7550510940735824 (change=-0.08312528348890771 %)
[2025-10-12 12:35:34] 2025-10-12 16:34:52,213 | INFO     | right removable region: 126
[2025-10-12 12:35:34] 2025-10-12 16:34:52,213 | INFO     | sum of square deviations: 635130048.0
[2025-10-12 12:35:34] 2025-10-12 16:34:52,214 | INFO     | sum of deviations: -29835772220.000004
[2025-10-12 12:35:34] 2025-10-12 16:34:52,214 | INFO     | mean x: 1760282994.0
[2025-10-12 12:35:34] 2025-10-12 16:34:52,214 | INFO     | mean y: 2606276.31496063
[2025-10-12 12:35:34] 2025-10-12 16:34:52,214 | INFO     | -- intersect: 82693391599.89586
[2025-10-12 12:35:34] 2025-10-12 16:34:52,214 | INFO     | intersect: 82693391599.89586
[2025-10-12 12:35:34] 2025-10-12 16:34:52,214 | INFO     | chi2: 0.13363713549337314
[2025-10-12 12:35:34] 2025-10-12 16:34:52,215 | INFO     | current chi2=0.13363713549337314 (change=92.37924057067418 %)
[2025-10-12 12:35:34] 2025-10-12 16:34:52,215 | INFO     | sum of square deviations: 563026370.5
[2025-10-12 12:35:34] 2025-10-12 16:34:52,215 | INFO     | sum of deviations: -28934975887.000004
[2025-10-12 12:35:34] 2025-10-12 16:34:52,216 | INFO     | mean x: 1760283146.5
[2025-10-12 12:35:34] 2025-10-12 16:34:52,216 | INFO     | mean y: 2604281.4590163934
[2025-10-12 12:35:34] 2025-10-12 16:34:52,216 | INFO     | -- intersect: 90466840180.4594
[2025-10-12 12:35:34] 2025-10-12 16:34:52,216 | INFO     | intersect: 90466840180.4594
[2025-10-12 12:35:34] 2025-10-12 16:34:52,217 | INFO     | chi2: 0.11161662800026566
[2025-10-12 12:35:34] 2025-10-12 16:34:52,217 | INFO     | current chi2=0.11161662800026566 (change=16.477835604459994 %)
[2025-10-12 12:35:34] 2025-10-12 16:34:52,217 | INFO     | left removable region: 20
[2025-10-12 12:35:34] 2025-10-12 16:34:52,217 | INFO     | sum of square deviations: 369281342.5
[2025-10-12 12:35:34] 2025-10-12 16:34:52,218 | INFO     | sum of deviations: -21373061110.999996
[2025-10-12 12:35:34] 2025-10-12 16:34:52,218 | INFO     | mean x: 1760283268.5
[2025-10-12 12:35:34] 2025-10-12 16:34:52,218 | INFO     | mean y: 2595304.6981132077
[2025-10-12 12:35:34] 2025-10-12 16:34:52,218 | INFO     | -- intersect: 101883295844.8867
[2025-10-12 12:35:34] 2025-10-12 16:34:52,218 | INFO     | intersect: 101883295844.8867
[2025-10-12 12:35:34] 2025-10-12 16:34:52,218 | INFO     | chi2: 0.10282326988822157
[2025-10-12 12:35:34] 2025-10-12 16:34:52,218 | INFO     | -- intersect: 101883295844.8867
[2025-10-12 12:35:34] 2025-10-12 16:34:52,219 | INFO     | current memory leak: -57.88 B/s (using 106 data points, chi2=0.10)
[2025-10-12 12:35:34] 2025-10-12 16:34:52,219 | INFO     | could have reported an average CPU frequency of 1989 MHz (8 samples)
[2025-10-12 12:35:34] 2025-10-12 16:34:52,219 | INFO     | ..............................
[2025-10-12 12:35:34] 2025-10-12 16:34:52,219 | INFO     | . Timing measurements:
[2025-10-12 12:35:34] 2025-10-12 16:34:52,219 | INFO     | . get job = 0 s
[2025-10-12 12:35:34] 2025-10-12 16:34:52,219 | INFO     | . initial setup = 2 s
[2025-10-12 12:35:34] 2025-10-12 16:34:52,220 | INFO     | . payload setup = 8 s
[2025-10-12 12:35:34] 2025-10-12 16:34:52,220 | INFO     | . stage-in = 0 s
[2025-10-12 12:35:34] 2025-10-12 16:34:52,220 | INFO     | . payload execution = 8039 s
[2025-10-12 12:35:34] 2025-10-12 16:34:52,220 | INFO     | . stage-out = 0 s
[2025-10-12 12:35:34] 2025-10-12 16:34:52,220 | INFO     | . log creation = 0 s
[2025-10-12 12:35:34] 2025-10-12 16:34:52,220 | INFO     | ..............................
[2025-10-12 12:35:34] 2025-10-12 16:34:52,702 | INFO     | 
[2025-10-12 12:35:34] 2025-10-12 16:34:52,703 | INFO     | job summary report
[2025-10-12 12:35:34] 2025-10-12 16:34:52,703 | INFO     | --------------------------------------------------
[2025-10-12 12:35:34] 2025-10-12 16:34:52,703 | INFO     | PanDA job id: 6839821987
[2025-10-12 12:35:34] 2025-10-12 16:34:52,703 | INFO     | task id: 46676269
[2025-10-12 12:35:34] 2025-10-12 16:34:52,703 | INFO     | errors: (none)
[2025-10-12 12:35:34] 2025-10-12 16:34:52,703 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 12:35:34] 2025-10-12 16:34:52,704 | INFO     | pilot state: finished 
[2025-10-12 12:35:34] 2025-10-12 16:34:52,704 | INFO     | transexitcode: 0
[2025-10-12 12:35:34] 2025-10-12 16:34:52,704 | INFO     | exeerrorcode: 0
[2025-10-12 12:35:34] 2025-10-12 16:34:52,704 | INFO     | exeerrordiag: 
[2025-10-12 12:35:34] 2025-10-12 16:34:52,704 | INFO     | exitcode: 0
[2025-10-12 12:35:34] 2025-10-12 16:34:52,704 | INFO     | exitmsg: OK
[2025-10-12 12:35:34] 2025-10-12 16:34:52,705 | INFO     | cpuconsumptiontime: 57067 s
[2025-10-12 12:35:34] 2025-10-12 16:34:52,705 | INFO     | nevents: 400
[2025-10-12 12:35:34] 2025-10-12 16:34:52,705 | INFO     | neventsw: 0
[2025-10-12 12:35:34] 2025-10-12 16:34:52,705 | INFO     | pid: 16660
[2025-10-12 12:35:34] 2025-10-12 16:34:52,705 | INFO     | pgrp: 16660
[2025-10-12 12:35:34] 2025-10-12 16:34:52,705 | INFO     | corecount: 8
[2025-10-12 12:35:34] 2025-10-12 16:34:52,706 | INFO     | event service: False
[2025-10-12 12:35:34] 2025-10-12 16:34:52,706 | INFO     | sizes: {0: 2348686, 1: 2348885, 6: 2349147, 11: 2349175, 8050: 2376889, 8051: 2386071, 8059: 2386209}
[2025-10-12 12:35:34] 2025-10-12 16:34:52,706 | INFO     | --------------------------------------------------
[2025-10-12 12:35:34] 2025-10-12 16:34:52,706 | INFO     | 
[2025-10-12 12:35:34] 2025-10-12 16:34:52,706 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 12:35:34] 2025-10-12 16:34:52,734 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 12:35:34] 2025-10-12 16:34:52,735 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 12:35:34] 2025-10-12 16:34:52,735 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 12:35:34] 2025-10-12 16:34:52,735 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 12:35:34] 2025-10-12 16:34:52,735 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 12:35:34] 2025-10-12 16:34:52,735 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 12:35:34] 2025-10-12 16:34:52,736 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 12:35:34] 2025-10-12 16:34:52,736 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 12:35:34] 2025-10-12 16:34:52,736 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 12:35:34] 2025-10-12 16:34:52,736 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 12:35:34] 2025-10-12 16:34:52,736 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 12:35:34] 2025-10-12 16:34:52,736 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 12:35:34] 2025-10-12 16:34:52,737 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 12:35:34] 2025-10-12 16:34:52,737 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 12:35:34] 2025-10-12 16:34:52,737 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 12:35:34] 2025-10-12 16:34:52,737 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 12:35:34] 2025-10-12 16:34:52,737 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 12:35:34] 2025-10-12 16:34:52,738 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 12:35:34] 2025-10-12 16:34:52,738 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 12:35:34] 2025-10-12 16:34:52,738 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 12:35:34] 2025-10-12 16:34:52,738 | INFO     | job 6839821987 has completed (purged errors)
[2025-10-12 12:35:34] 2025-10-12 16:34:52,738 | INFO     | overall cleanup function is called
[2025-10-12 12:35:34] 2025-10-12 16:34:53,746 | INFO     | --- collectZombieJob: --- 10, [16660]
[2025-10-12 12:35:34] 2025-10-12 16:34:53,747 | INFO     | zombie collector waiting for pid 16660
[2025-10-12 12:35:34] 2025-10-12 16:34:53,747 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 12:35:34] 2025-10-12 16:34:53,747 | INFO     | collected zombie processes
[2025-10-12 12:35:34] 2025-10-12 16:34:53,747 | INFO     | will attempt to kill all subprocesses of pid=16660
[2025-10-12 12:35:34] 2025-10-12 16:34:53,840 | INFO     | process IDs to be killed: [16660] (in reverse order)
[2025-10-12 12:35:34] 2025-10-12 16:34:53,896 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 12:35:34] 2025-10-12 16:34:53,897 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 12:35:34] 2025-10-12 16:34:53,901 | INFO     | did not find any defunct processes belonging to 16660
[2025-10-12 12:35:34] 2025-10-12 16:34:53,905 | INFO     | did not find any defunct processes belonging to 16660
[2025-10-12 12:35:34] 2025-10-12 16:34:53,905 | INFO     | ready for new job
[2025-10-12 12:35:34] 2025-10-12 16:34:53,905 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 12:35:34] 2025-10-12 16:34:53,907 | INFO     | ***************************************
[2025-10-12 12:35:34] 2025-10-12 16:34:53,908 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 12:35:34] 2025-10-12 16:34:53,908 | INFO     | ***************************************
[2025-10-12 12:35:34] 2025-10-12 16:34:53,908 | INFO     | 
[2025-10-12 12:35:34] 2025-10-12 16:34:53,908 | INFO     | architecture information:
[2025-10-12 12:35:34] 2025-10-12 16:34:53,909 | INFO     | executing command: cat /etc/os-release
[2025-10-12 12:35:34] 2025-10-12 16:34:53,926 | INFO     | cat /etc/os-release:
[2025-10-12 12:35:34] NAME="CentOS Linux"
[2025-10-12 12:35:34] VERSION="7 (Core)"
[2025-10-12 12:35:34] ID="centos"
[2025-10-12 12:35:34] ID_LIKE="rhel fedora"
[2025-10-12 12:35:34] VERSION_ID="7"
[2025-10-12 12:35:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 12:35:34] ANSI_COLOR="0;31"
[2025-10-12 12:35:34] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 12:35:34] HOME_URL="https://www.centos.org/"
[2025-10-12 12:35:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 12:35:34] 
[2025-10-12 12:35:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 12:35:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 12:35:34] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 12:35:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 12:35:34] 
[2025-10-12 12:35:34] 2025-10-12 16:34:53,926 | INFO     | ***************************************
[2025-10-12 12:35:34] 2025-10-12 16:34:54,429 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 12:35:34] 2025-10-12 16:34:54,448 | INFO     | sufficient remaining disk space (18565038080 B)
[2025-10-12 12:35:34] 2025-10-12 16:34:54,448 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 12:35:34] 2025-10-12 16:34:54,449 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 12:35:34] 2025-10-12 16:34:54,449 | INFO     | update_server=False
[2025-10-12 12:35:34] 2025-10-12 16:34:54,449 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 12:35:34] 2025-10-12 16:34:54,637 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 12:35:34] 2025-10-12 16:34:54,637 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 12:35:34] 2025-10-12 16:34:54,637 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 12:35:34] 2025-10-12 16:34:54,638 | INFO     | will abort loop
[2025-10-12 12:35:34] 2025-10-12 16:34:54,817 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 12:35:34] 2025-10-12 16:34:54,820 | INFO     | all data control threads have been joined
[2025-10-12 12:35:34] 2025-10-12 16:34:54,827 | INFO     | all payload control threads have been joined
[2025-10-12 12:35:34] 2025-10-12 16:34:54,897 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 12:35:34] 2025-10-12 16:34:55,129 | INFO     | all job control threads have been joined
[2025-10-12 12:35:34] 2025-10-12 16:34:55,451 | INFO     | [job] retrieve thread has finished
[2025-10-12 12:35:34] 2025-10-12 16:34:55,516 | INFO     | [payload] validate_post thread has finished
[2025-10-12 12:35:34] 2025-10-12 16:34:55,643 | INFO     | [job] job monitor thread has finished
[2025-10-12 12:35:34] 2025-10-12 16:34:55,825 | INFO     | [data] control thread has finished
[2025-10-12 12:35:34] 2025-10-12 16:34:55,831 | INFO     | [payload] control thread has finished
[2025-10-12 12:35:34] 2025-10-12 16:34:56,089 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 12:35:34] 2025-10-12 16:34:56,133 | INFO     | [job] control thread has finished
[2025-10-12 12:35:34] 2025-10-12 16:34:56,136 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 12:35:34] 2025-10-12 16:34:56,209 | INFO     | [data] copytool_in thread has finished
[2025-10-12 12:35:34] 2025-10-12 16:34:56,281 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 12:35:34] 2025-10-12 16:34:56,303 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 12:35:34] 2025-10-12 16:34:56,705 | INFO     | [job] validate thread has finished
[2025-10-12 12:35:34] 2025-10-12 16:34:56,823 | INFO     | [data] copytool_out thread has finished
[2025-10-12 12:35:34] 2025-10-12 16:34:56,986 | INFO     | [payload] failed_post thread has finished
[2025-10-12 12:35:34] 2025-10-12 16:34:57,323 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 12:35:34] 2025-10-12 16:34:58,329 | INFO     | [job] queue monitor thread has finished
[2025-10-12 12:35:34] 2025-10-12 16:34:58,902 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 12:35:34] 2025-10-12 16:35:13,176 [wrapper] supervise_pilot (15 min periods counter: 10)
[2025-10-12 12:35:34] 2025-10-12 16:35:24,754 | INFO     | PID=10139 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 12:35:34] 2025-10-12 16:35:24,754 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 12:35:34] 2025-10-12 16:35:24,755 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 12:35:34] 2025-10-12 16:35:24,755 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 12:35:34] 2025-10-12 16:35:28,067 | INFO     | [monitor] cgroup control has ended
[2025-10-12 12:35:34] 2025-10-12 16:35:29,071 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140021717202752)>', '<ExcThread(monitor, started 140020740507392)>']
[2025-10-12 12:35:34] 2025-10-12 16:35:29,774 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 12:35:34] 2025-10-12 16:35:29,775 | INFO     | [monitor] control thread has ended
[2025-10-12 12:35:34] 2025-10-12 16:35:34,075 | INFO     | all workflow threads have been joined
[2025-10-12 12:35:34] 2025-10-12 16:35:34,076 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 12:35:34] 2025-10-12 16:35:34,076 | INFO     | traces error code: 0
[2025-10-12 12:35:34] 2025-10-12 16:35:34,076 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 12:35:34] 2025-10-12 16:35:34,188 [wrapper] ==== pilot stdout END ====
[2025-10-12 12:35:34] 2025-10-12 16:35:34,192 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 12:35:34] 2025-10-12 16:35:34,197 [wrapper] pilotpid: 10139
[2025-10-12 12:35:34] 2025-10-12 16:35:34,202 [wrapper] Pilot exit status: 0
[2025-10-12 12:35:34] 2025-10-12 16:35:34,221 [wrapper] pandaids: 6839821987
[2025-10-12 12:35:34] 2025-10-12 16:35:34,264 [wrapper] cleanup supervisor_pilot 28234 10140
[2025-10-12 12:35:34] 2025-10-12 16:35:34,269 [wrapper] Test setup, not cleaning
[2025-10-12 12:35:34] 2025-10-12 16:35:34,274 [wrapper] apfmon messages muted
[2025-10-12 12:35:34] 2025-10-12 16:35:34,278 [wrapper] ==== wrapper stdout END ====
[2025-10-12 12:35:34] 2025-10-12 16:35:34,283 [wrapper] ==== wrapper stderr END ====
[2025-10-12 12:35:34]  *** Error codes and diagnostics ***
[2025-10-12 12:35:34]     "exeErrorCode": 0,
[2025-10-12 12:35:34]     "exeErrorDiag": "",
[2025-10-12 12:35:34]     "pilotErrorCode": 0,
[2025-10-12 12:35:34]     "pilotErrorDiag": "",
[2025-10-12 12:35:34]  *** Listing of results directory ***
[2025-10-12 12:35:34] total 408112
[2025-10-12 12:35:34] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 05:04 pilot3.tar.gz
[2025-10-12 12:35:34] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 05:27 queuedata.json
[2025-10-12 12:35:34] -rwx------ 1 boincer umatlas     36292 Oct 12 05:28 runpilot2-wrapper.sh
[2025-10-12 12:35:34] -rw-r--r-- 1 boincer umatlas       100 Oct 12 10:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 12:35:34] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 10:19 run_atlas
[2025-10-12 12:35:34] -rw-r--r-- 1 boincer umatlas       105 Oct 12 10:19 job.xml
[2025-10-12 12:35:34] -rw-r--r-- 2 boincer umatlas 218091300 Oct 12 10:19 EVNT.46676267._003572.pool.root.1
[2025-10-12 12:35:34] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 10:19 start_atlas.sh
[2025-10-12 12:35:34] drwxrwx--x 2 boincer umatlas      4096 Oct 12 10:19 shared
[2025-10-12 12:35:34] -rw-r--r-- 2 boincer umatlas    569684 Oct 12 10:19 input.tar.gz
[2025-10-12 12:35:34] -rw-r--r-- 1 boincer umatlas         0 Oct 12 10:19 boinc_lockfile
[2025-10-12 12:35:34] -rw-r--r-- 1 boincer umatlas      2550 Oct 12 10:19 pandaJob.out
[2025-10-12 12:35:34] -rw------- 1 boincer umatlas    975528 Oct 12 10:20 agis_schedconf.cvmfs.json
[2025-10-12 12:35:34] -rw------- 1 boincer umatlas   1560580 Oct 12 10:20 agis_ddmendpoints.agis.ALL.json
[2025-10-12 12:35:34] drwx------ 5 boincer umatlas      4096 Oct 12 10:20 pilot3
[2025-10-12 12:35:34] -rw-r--r-- 1 boincer umatlas      5910 Oct 12 12:30 init_data.xml
[2025-10-12 12:35:34] -rw------- 1 boincer umatlas 192860950 Oct 12 12:34 HITS.46676269._075308.pool.root.1
[2025-10-12 12:35:34] -rw-r--r-- 1 boincer umatlas       529 Oct 12 12:34 boinc_task_state.xml
[2025-10-12 12:35:34] -rw------- 1 boincer umatlas      1049 Oct 12 12:34 memory_monitor_summary.json
[2025-10-12 12:35:34] -rw------- 1 boincer umatlas    389987 Oct 12 12:34 log.46676269._075308.job.log.tgz.1
[2025-10-12 12:35:34] -rw------- 1 boincer umatlas      7849 Oct 12 12:34 heartbeat.json
[2025-10-12 12:35:34] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 12:35 boinc_mmap_file
[2025-10-12 12:35:34] -rw-r--r-- 1 boincer umatlas        27 Oct 12 12:35 wrapper_checkpoint.txt
[2025-10-12 12:35:34] -rw------- 1 boincer umatlas        95 Oct 12 12:35 pilot_heartbeat.json
[2025-10-12 12:35:34] -rw------- 1 boincer umatlas      4932 Oct 12 12:35 pilotlog.txt
[2025-10-12 12:35:34] -rw------- 1 boincer umatlas   1134370 Oct 12 12:35 log.46676269._075308.job.log.1
[2025-10-12 12:35:34] -rw------- 1 boincer umatlas       357 Oct 12 12:35 output.list
[2025-10-12 12:35:34] -rw-r--r-- 1 boincer umatlas       620 Oct 12 12:35 runtime_log
[2025-10-12 12:35:34] -rw------- 1 boincer umatlas   1546240 Oct 12 12:35 result.tar.gz
[2025-10-12 12:35:34] -rw------- 1 boincer umatlas       660 Oct 12 12:35 x1wKDmmY7R8n9Rq4apOajLDm4fhM0noT9bVof3QYDmVZTMDmhm8eSm.diag
[2025-10-12 12:35:34] -rw-r--r-- 1 boincer umatlas      8703 Oct 12 12:35 runtime_log.err
[2025-10-12 12:35:34] -rw-r--r-- 1 boincer umatlas     21069 Oct 12 12:35 stderr.txt
[2025-10-12 12:35:34] HITS file was successfully produced:
[2025-10-12 12:35:34] -rw------- 1 boincer umatlas 192860950 Oct 12 12:34 shared/HITS.pool.root.1
[2025-10-12 12:35:34]  *** Contents of shared directory: ***
[2025-10-12 12:35:34] total 403416
[2025-10-12 12:35:34] -rw-r--r-- 2 boincer umatlas 218091300 Oct 12 10:19 ATLAS.root_0
[2025-10-12 12:35:34] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 10:19 start_atlas.sh
[2025-10-12 12:35:34] -rw-r--r-- 2 boincer umatlas    569684 Oct 12 10:19 input.tar.gz
[2025-10-12 12:35:34] -rw------- 1 boincer umatlas 192860950 Oct 12 12:34 HITS.pool.root.1
[2025-10-12 12:35:34] -rw------- 1 boincer umatlas   1546240 Oct 12 12:35 result.tar.gz
12:35:36 (5235): run_atlas exited; CPU time 56928.188455
12:35:36 (5235): called boinc_finish(0)

</stderr_txt>
]]>

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