Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:24:27 (3428520): wrapper (7.7.26015): starting
11:24:27 (3428520): wrapper: running run_atlas (--nthreads 9)
[2025-10-12 11:24:27] Arguments: --nthreads 9
[2025-10-12 11:24:27] Threads: 9
[2025-10-12 11:24:27] Checking for CVMFS
[2025-10-12 11:24:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 11:24:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 11:24:29] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 11:24:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 11:24:50] 2.13.2.0 2531586 129436 802636 151625 1 250 26231756 32935937 51112 16776704 0 187150115 99.740 124731226 23420 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 11:24:50] CVMFS is ok
[2025-10-12 11:24:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 11:24:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 11:24:50] Further information can be found at the LHC@home message board.
[2025-10-12 11:24:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 11:24:50] Checking for apptainer binary...
[2025-10-12 11:24:50] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 11:24:50] Running /usr/bin/apptainer --version
[2025-10-12 11:24:50] apptainer version 1.4.3-1.el9
[2025-10-12 11:24:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 11:24:51] c-1-3.aglt2.org
[2025-10-12 11:24:51] apptainer works
[2025-10-12 11:24:51] Set ATHENA_PROC_NUMBER=9
[2025-10-12 11:24:51] Set ATHENA_CORE_NUMBER=9
[2025-10-12 11:24:51] Starting ATLAS job with PandaID=6839989364
[2025-10-12 11:24:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 15:32:30]  *** The last 200 lines of the pilot log: ***
[2025-10-12 15:32:30] 2025-10-12 19:31:45,156 | INFO     | time since job start (14749s) is within the limit (172800.0s)
[2025-10-12 15:32:30] 2025-10-12 19:31:45,546 | INFO     | monitor loop #795: job 0:6839989364 is in state 'finished'
[2025-10-12 15:32:30] 2025-10-12 19:31:45,546 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 15:32:30] 2025-10-12 19:31:45,895 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-12 15:32:30] 2025-10-12 19:31:45,917 | INFO     | found 40 cores (20 cores per socket, 2 sockets) HT, CPU MHz: 2840.2267625
[2025-10-12 15:32:30] 2025-10-12 19:31:45,972 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6839989364/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 15:32:30] 2025-10-12 19:31:45,973 | INFO     | extracted standard info from prmon json
[2025-10-12 15:32:30] 2025-10-12 19:31:45,973 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 15:32:30] 2025-10-12 19:31:45,973 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 15:32:30] 2025-10-12 19:31:45,974 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 15:32:30] 2025-10-12 19:31:45,974 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 15:32:30] 2025-10-12 19:31:45,987 | INFO     | fitting pss+swap vs Time
[2025-10-12 15:32:30] 2025-10-12 19:31:45,987 | INFO     | sum of square deviations: 4180072728.2899137
[2025-10-12 15:32:30] 2025-10-12 19:31:45,989 | INFO     | sum of deviations: -23616977830.668068
[2025-10-12 15:32:30] 2025-10-12 19:31:45,989 | INFO     | mean x: 1760290160.7689075
[2025-10-12 15:32:30] 2025-10-12 19:31:45,989 | INFO     | mean y: 2209829.3151260503
[2025-10-12 15:32:30] 2025-10-12 19:31:45,989 | INFO     | -- intersect: 9947666859.540054
[2025-10-12 15:32:30] 2025-10-12 19:31:45,989 | INFO     | intersect: 9947666859.540054
[2025-10-12 15:32:30] 2025-10-12 19:31:46,002 | INFO     | chi2: 4.080846569844045
[2025-10-12 15:32:30] 2025-10-12 19:31:46,003 | INFO     | sum of square deviations: 3922124620.4205823
[2025-10-12 15:32:30] 2025-10-12 19:31:46,004 | INFO     | sum of deviations: -8148156501.776814
[2025-10-12 15:32:30] 2025-10-12 19:31:46,005 | INFO     | mean x: 1760290008.2746782
[2025-10-12 15:32:30] 2025-10-12 19:31:46,005 | INFO     | mean y: 2218849.3090128754
[2025-10-12 15:32:30] 2025-10-12 19:31:46,005 | INFO     | -- intersect: 3659195581.0677357
[2025-10-12 15:32:30] 2025-10-12 19:31:46,005 | INFO     | intersect: 3659195581.0677357
[2025-10-12 15:32:30] 2025-10-12 19:31:46,005 | INFO     | chi2: 3.428909189254159
[2025-10-12 15:32:30] 2025-10-12 19:31:46,005 | INFO     | current chi2=3.428909189254159 (change=15.975542560395764 %)
[2025-10-12 15:32:30] 2025-10-12 19:31:46,005 | INFO     | right removable region: 232
[2025-10-12 15:32:30] 2025-10-12 19:31:46,017 | INFO     | sum of square deviations: 3922099975.965658
[2025-10-12 15:32:30] 2025-10-12 19:31:46,018 | INFO     | sum of deviations: -71199548918.84547
[2025-10-12 15:32:30] 2025-10-12 19:31:46,019 | INFO     | mean x: 1760290313.2703862
[2025-10-12 15:32:30] 2025-10-12 19:31:46,019 | INFO     | mean y: 2237827.2832618025
[2025-10-12 15:32:30] 2025-10-12 19:31:46,019 | INFO     | -- intersect: 31957536529.276897
[2025-10-12 15:32:30] 2025-10-12 19:31:46,019 | INFO     | intersect: 31957536529.276897
[2025-10-12 15:32:30] 2025-10-12 19:31:46,019 | INFO     | chi2: 1.7957927795399296
[2025-10-12 15:32:30] 2025-10-12 19:31:46,019 | INFO     | current chi2=1.7957927795399296 (change=55.994601884565384 %)
[2025-10-12 15:32:30] 2025-10-12 19:31:46,019 | INFO     | sum of square deviations: 3674965002.140358
[2025-10-12 15:32:30] 2025-10-12 19:31:46,040 | INFO     | sum of deviations: -90032643578.31587
[2025-10-12 15:32:30] 2025-10-12 19:31:46,040 | INFO     | mean x: 1760290465.7719297
[2025-10-12 15:32:30] 2025-10-12 19:31:46,040 | INFO     | mean y: 2249429.513157895
[2025-10-12 15:32:30] 2025-10-12 19:31:46,040 | INFO     | -- intersect: 43127450351.65757
[2025-10-12 15:32:30] 2025-10-12 19:31:46,040 | INFO     | intersect: 43127450351.65757
[2025-10-12 15:32:30] 2025-10-12 19:31:46,041 | INFO     | chi2: 1.3759440982964328
[2025-10-12 15:32:30] 2025-10-12 19:31:46,041 | INFO     | current chi2=1.3759440982964328 (change=23.379572856455034 %)
[2025-10-12 15:32:30] 2025-10-12 19:31:46,041 | INFO     | left removable region: 20
[2025-10-12 15:32:30] 2025-10-12 19:31:46,041 | INFO     | sum of square deviations: 2954320087.6745205
[2025-10-12 15:32:30] 2025-10-12 19:31:46,042 | INFO     | sum of deviations: -66409285522.11799
[2025-10-12 15:32:30] 2025-10-12 19:31:46,042 | INFO     | mean x: 1760290587.768868
[2025-10-12 15:32:30] 2025-10-12 19:31:46,042 | INFO     | mean y: 2254899.466981132
[2025-10-12 15:32:30] 2025-10-12 19:31:46,042 | INFO     | -- intersect: 39571305231.131165
[2025-10-12 15:32:30] 2025-10-12 19:31:46,043 | INFO     | intersect: 39571305231.131165
[2025-10-12 15:32:30] 2025-10-12 19:31:46,043 | INFO     | chi2: 0.6294447670877827
[2025-10-12 15:32:30] 2025-10-12 19:31:46,043 | INFO     | -- intersect: 39571305231.131165
[2025-10-12 15:32:30] 2025-10-12 19:31:46,043 | INFO     | current memory leak: -22.48 B/s (using 212 data points, chi2=0.63)
[2025-10-12 15:32:30] 2025-10-12 19:31:46,044 | INFO     | could have reported an average CPU frequency of 2840 MHz (12 samples)
[2025-10-12 15:32:30] 2025-10-12 19:31:46,063 | INFO     | ..............................
[2025-10-12 15:32:30] 2025-10-12 19:31:46,063 | INFO     | . Timing measurements:
[2025-10-12 15:32:30] 2025-10-12 19:31:46,063 | INFO     | . get job = 0 s
[2025-10-12 15:32:30] 2025-10-12 19:31:46,063 | INFO     | . initial setup = 5 s
[2025-10-12 15:32:30] 2025-10-12 19:31:46,063 | INFO     | . payload setup = 49 s
[2025-10-12 15:32:30] 2025-10-12 19:31:46,063 | INFO     | . stage-in = 0 s
[2025-10-12 15:32:30] 2025-10-12 19:31:46,063 | INFO     | . payload execution = 14546 s
[2025-10-12 15:32:30] 2025-10-12 19:31:46,064 | INFO     | . stage-out = 5 s
[2025-10-12 15:32:30] 2025-10-12 19:31:46,064 | INFO     | . log creation = 0 s
[2025-10-12 15:32:30] 2025-10-12 19:31:46,064 | INFO     | ..............................
[2025-10-12 15:32:30] 2025-10-12 19:31:46,620 | INFO     | 
[2025-10-12 15:32:30] 2025-10-12 19:31:46,620 | INFO     | job summary report
[2025-10-12 15:32:30] 2025-10-12 19:31:46,620 | INFO     | --------------------------------------------------
[2025-10-12 15:32:30] 2025-10-12 19:31:46,620 | INFO     | PanDA job id: 6839989364
[2025-10-12 15:32:30] 2025-10-12 19:31:46,620 | INFO     | task id: 46676269
[2025-10-12 15:32:30] 2025-10-12 19:31:46,620 | INFO     | errors: (none)
[2025-10-12 15:32:30] 2025-10-12 19:31:46,620 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 15:32:30] 2025-10-12 19:31:46,620 | INFO     | pilot state: finished 
[2025-10-12 15:32:30] 2025-10-12 19:31:46,621 | INFO     | transexitcode: 0
[2025-10-12 15:32:30] 2025-10-12 19:31:46,621 | INFO     | exeerrorcode: 0
[2025-10-12 15:32:30] 2025-10-12 19:31:46,621 | INFO     | exeerrordiag: 
[2025-10-12 15:32:30] 2025-10-12 19:31:46,621 | INFO     | exitcode: 0
[2025-10-12 15:32:30] 2025-10-12 19:31:46,621 | INFO     | exitmsg: OK
[2025-10-12 15:32:30] 2025-10-12 19:31:46,621 | INFO     | cpuconsumptiontime: 45874 s
[2025-10-12 15:32:30] 2025-10-12 19:31:46,621 | INFO     | nevents: 400
[2025-10-12 15:32:30] 2025-10-12 19:31:46,644 | INFO     | neventsw: 0
[2025-10-12 15:32:30] 2025-10-12 19:31:46,644 | INFO     | pid: 3450601
[2025-10-12 15:32:30] 2025-10-12 19:31:46,644 | INFO     | pgrp: 3450601
[2025-10-12 15:32:30] 2025-10-12 19:31:46,644 | INFO     | corecount: 9
[2025-10-12 15:32:30] 2025-10-12 19:31:46,644 | INFO     | event service: False
[2025-10-12 15:32:30] 2025-10-12 19:31:46,644 | INFO     | sizes: {0: 2348029, 2: 2348714, 3: 2348742, 4: 2348913, 15: 2348941, 26: 2348969, 37: 2349125, 42: 2349415, 48: 2349471, 14629: 2380396, 14635: 2389730, 14665: 238
[2025-10-12 15:32:30] 2025-10-12 19:31:46,644 | INFO     | --------------------------------------------------
[2025-10-12 15:32:30] 2025-10-12 19:31:46,644 | INFO     | 
[2025-10-12 15:32:30] 2025-10-12 19:31:46,645 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 15:32:30] 2025-10-12 19:31:46,754 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 15:32:30] 2025-10-12 19:31:46,754 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 15:32:30] 2025-10-12 19:31:46,755 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 15:32:30] 2025-10-12 19:31:46,755 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 15:32:30] 2025-10-12 19:31:46,755 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 15:32:30] 2025-10-12 19:31:46,755 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 15:32:30] 2025-10-12 19:31:46,765 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 15:32:30] 2025-10-12 19:31:46,834 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 15:32:30] 2025-10-12 19:31:46,834 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 15:32:30] 2025-10-12 19:31:46,834 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 15:32:30] 2025-10-12 19:31:46,834 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 15:32:30] 2025-10-12 19:31:46,834 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 15:32:30] 2025-10-12 19:31:46,834 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 15:32:30] 2025-10-12 19:31:46,834 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 15:32:30] 2025-10-12 19:31:46,835 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 15:32:30] 2025-10-12 19:31:46,835 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 15:32:30] 2025-10-12 19:31:46,835 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 15:32:30] 2025-10-12 19:31:46,835 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 15:32:30] 2025-10-12 19:31:46,835 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 15:32:30] 2025-10-12 19:31:46,835 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 15:32:30] 2025-10-12 19:31:46,835 | INFO     | job 6839989364 has completed (purged errors)
[2025-10-12 15:32:30] 2025-10-12 19:31:46,835 | INFO     | overall cleanup function is called
[2025-10-12 15:32:30] 2025-10-12 19:31:47,853 | INFO     | --- collectZombieJob: --- 10, [3450601]
[2025-10-12 15:32:30] 2025-10-12 19:31:47,853 | INFO     | zombie collector waiting for pid 3450601
[2025-10-12 15:32:30] 2025-10-12 19:31:47,853 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 15:32:30] 2025-10-12 19:31:47,853 | INFO     | collected zombie processes
[2025-10-12 15:32:30] 2025-10-12 19:31:47,853 | INFO     | will attempt to kill all subprocesses of pid=3450601
[2025-10-12 15:32:30] 2025-10-12 19:31:50,220 | INFO     | process IDs to be killed: [3450601] (in reverse order)
[2025-10-12 15:32:30] 2025-10-12 19:31:51,246 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 15:32:30] 2025-10-12 19:31:51,246 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 15:32:30] 2025-10-12 19:31:51,279 | INFO     | did not find any defunct processes belonging to 3450601
[2025-10-12 15:32:30] 2025-10-12 19:31:51,389 | INFO     | did not find any defunct processes belonging to 3450601
[2025-10-12 15:32:30] 2025-10-12 19:31:51,389 | INFO     | ready for new job
[2025-10-12 15:32:30] 2025-10-12 19:31:51,389 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 15:32:30] 2025-10-12 19:31:51,398 | INFO     | ***************************************
[2025-10-12 15:32:30] 2025-10-12 19:31:51,398 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 15:32:30] 2025-10-12 19:31:51,398 | INFO     | ***************************************
[2025-10-12 15:32:30] 2025-10-12 19:31:51,398 | INFO     | 
[2025-10-12 15:32:30] 2025-10-12 19:31:51,407 | INFO     | architecture information:
[2025-10-12 15:32:30] 2025-10-12 19:31:51,408 | INFO     | executing command: cat /etc/os-release
[2025-10-12 15:32:30] 2025-10-12 19:31:51,536 | INFO     | cat /etc/os-release:
[2025-10-12 15:32:30] NAME="CentOS Linux"
[2025-10-12 15:32:30] VERSION="7 (Core)"
[2025-10-12 15:32:30] ID="centos"
[2025-10-12 15:32:30] ID_LIKE="rhel fedora"
[2025-10-12 15:32:30] VERSION_ID="7"
[2025-10-12 15:32:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 15:32:30] ANSI_COLOR="0;31"
[2025-10-12 15:32:30] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 15:32:30] HOME_URL="https://www.centos.org/"
[2025-10-12 15:32:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 15:32:30] 
[2025-10-12 15:32:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 15:32:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 15:32:30] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 15:32:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 15:32:30] 
[2025-10-12 15:32:30] 2025-10-12 19:31:51,536 | INFO     | ***************************************
[2025-10-12 15:32:30] 2025-10-12 19:31:52,040 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 15:32:30] 2025-10-12 19:31:52,128 | INFO     | sufficient remaining disk space (74724671488 B)
[2025-10-12 15:32:30] 2025-10-12 19:31:52,128 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 15:32:30] 2025-10-12 19:31:52,128 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 15:32:30] 2025-10-12 19:31:52,129 | INFO     | update_server=False
[2025-10-12 15:32:30] 2025-10-12 19:31:52,129 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 15:32:30] 2025-10-12 19:31:52,132 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 15:32:30] 2025-10-12 19:31:52,133 | INFO     | aborting loop
[2025-10-12 15:32:30] 2025-10-12 19:31:52,133 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 15:32:30] 2025-10-12 19:31:52,348 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 15:32:30] 2025-10-12 19:31:52,354 | INFO     | all payload control threads have been joined
[2025-10-12 15:32:30] 2025-10-12 19:31:52,991 | INFO     | all data control threads have been joined
[2025-10-12 15:32:30] 2025-10-12 19:31:53,135 | INFO     | [job] retrieve thread has finished
[2025-10-12 15:32:30] 2025-10-12 19:31:53,139 | INFO     | [job] job monitor thread has finished
[2025-10-12 15:32:30] 2025-10-12 19:31:53,139 | INFO     | [job] queue monitor thread has finished
[2025-10-12 15:32:30] 2025-10-12 19:31:53,221 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 15:32:30] 2025-10-12 19:31:53,240 | INFO     | [payload] failed_post thread has finished
[2025-10-12 15:32:30] 2025-10-12 19:31:53,261 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 15:32:30] 2025-10-12 19:31:53,360 | INFO     | [payload] control thread has finished
[2025-10-12 15:32:30] 2025-10-12 19:31:53,460 | INFO     | all job control threads have been joined
[2025-10-12 15:32:30] 2025-10-12 19:31:54,001 | INFO     | [data] control thread has finished
[2025-10-12 15:32:30] 2025-10-12 19:31:54,215 | INFO     | [data] copytool_in thread has finished
[2025-10-12 15:32:30] 2025-10-12 19:31:54,215 | INFO     | [job] validate thread has finished
[2025-10-12 15:32:30] 2025-10-12 19:31:54,229 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 15:32:30] 2025-10-12 19:31:54,232 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 15:32:30] 2025-10-12 19:31:54,355 | INFO     | [data] copytool_out thread has finished
[2025-10-12 15:32:30] 2025-10-12 19:31:54,471 | INFO     | [job] control thread has finished
[2025-10-12 15:32:30] 2025-10-12 19:31:54,493 | INFO     | [payload] validate_post thread has finished
[2025-10-12 15:32:30] 2025-10-12 19:31:54,733 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 15:32:30] 2025-10-12 19:31:58,751 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 15:32:30] 2025-10-12 19:32:19,118 | INFO     | PID=3439613 has CPU usage=4.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 15:32:30] 2025-10-12 19:32:19,119 | INFO     | .. there are 67 such processes running
[2025-10-12 15:32:30] 2025-10-12 19:32:19,119 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 15:32:30] 2025-10-12 19:32:19,119 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 15:32:30] 2025-10-12 19:32:19,119 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 15:32:30] 2025-10-12 19:32:22,151 | INFO     | [monitor] cgroup control has ended
[2025-10-12 15:32:30] 2025-10-12 19:32:22,806 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140082056103744)>', '<ExcThread(monitor, started 140080886834944)>']
[2025-10-12 15:32:30] 2025-10-12 19:32:23,158 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 15:32:30] 2025-10-12 19:32:23,158 | INFO     | [monitor] control thread has ended
[2025-10-12 15:32:30] 2025-10-12 19:32:27,831 | INFO     | all workflow threads have been joined
[2025-10-12 15:32:30] 2025-10-12 19:32:27,831 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 15:32:30] 2025-10-12 19:32:27,832 | INFO     | traces error code: 0
[2025-10-12 15:32:30] 2025-10-12 19:32:27,832 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 15:32:30] 2025-10-12 19:32:28,466 [wrapper] ==== pilot stdout END ====
[2025-10-12 15:32:30] 2025-10-12 19:32:28,509 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 15:32:30] 2025-10-12 19:32:28,549 [wrapper] pilotpid: 3439613
[2025-10-12 15:32:30] 2025-10-12 19:32:28,590 [wrapper] Pilot exit status: 0
[2025-10-12 15:32:30] 2025-10-12 19:32:28,730 [wrapper] pandaids: 6839989364
[2025-10-12 15:32:30] 2025-10-12 19:32:29,370 [wrapper] cleanup supervisor_pilot  547931 3439614
[2025-10-12 15:32:30] 2025-10-12 19:32:29,404 [wrapper] Test setup, not cleaning
[2025-10-12 15:32:30] 2025-10-12 19:32:29,420 [wrapper] apfmon messages muted
[2025-10-12 15:32:30] 2025-10-12 19:32:29,451 [wrapper] ==== wrapper stdout END ====
[2025-10-12 15:32:30] 2025-10-12 19:32:29,478 [wrapper] ==== wrapper stderr END ====
[2025-10-12 15:32:30]  *** Error codes and diagnostics ***
[2025-10-12 15:32:30]     "exeErrorCode": 0,
[2025-10-12 15:32:30]     "exeErrorDiag": "",
[2025-10-12 15:32:30]     "pilotErrorCode": 0,
[2025-10-12 15:32:30]     "pilotErrorDiag": "",
[2025-10-12 15:32:30]  *** Listing of results directory ***
[2025-10-12 15:32:30] total 418072
[2025-10-12 15:32:30] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 08:35 pilot3.tar.gz
[2025-10-12 15:32:30] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 08:51 queuedata.json
[2025-10-12 15:32:30] -rwx------. 1 boincer umatlas     36292 Oct 12 08:52 runpilot2-wrapper.sh
[2025-10-12 15:32:30] -rw-r--r--. 1 boincer umatlas       100 Oct 12 11:24 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 15:32:30] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 11:24 run_atlas
[2025-10-12 15:32:30] -rw-r--r--. 1 boincer umatlas       105 Oct 12 11:24 job.xml
[2025-10-12 15:32:30] -rw-r--r--. 2 boincer umatlas 219742147 Oct 12 11:24 EVNT.46676267._003829.pool.root.1
[2025-10-12 15:32:30] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 11:24 start_atlas.sh
[2025-10-12 15:32:30] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 11:24 shared
[2025-10-12 15:32:30] -rw-r--r--. 2 boincer umatlas    569679 Oct 12 11:24 input.tar.gz
[2025-10-12 15:32:30] -rw-r--r--. 1 boincer umatlas         0 Oct 12 11:24 boinc_lockfile
[2025-10-12 15:32:30] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 11:24 pandaJob.out
[2025-10-12 15:32:30] -rw-------. 1 boincer umatlas    975528 Oct 12 11:25 agis_schedconf.cvmfs.json
[2025-10-12 15:32:30] drwx------. 5 boincer umatlas      4096 Oct 12 11:25 pilot3
[2025-10-12 15:32:30] -rw-r--r--. 1 boincer umatlas      6839 Oct 12 15:27 init_data.xml
[2025-10-12 15:32:30] -rw-------. 1 boincer umatlas 200127138 Oct 12 15:29 HITS.46676269._078737.pool.root.1
[2025-10-12 15:32:30] -rw-r--r--. 1 boincer umatlas       531 Oct 12 15:29 boinc_task_state.xml
[2025-10-12 15:32:30] -rw-------. 1 boincer umatlas      1042 Oct 12 15:30 memory_monitor_summary.json
[2025-10-12 15:32:30] -rw-------. 1 boincer umatlas   1560580 Oct 12 15:31 agis_ddmendpoints.agis.ALL.json
[2025-10-12 15:32:30] -rw-------. 1 boincer umatlas    458036 Oct 12 15:31 log.46676269._078737.job.log.tgz.1
[2025-10-12 15:32:30] -rw-------. 1 boincer umatlas      7826 Oct 12 15:31 heartbeat.json
[2025-10-12 15:32:30] -rw-------. 1 boincer umatlas        95 Oct 12 15:31 pilot_heartbeat.json
[2025-10-12 15:32:30] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 15:32 boinc_mmap_file
[2025-10-12 15:32:30] -rw-------. 1 boincer umatlas      4824 Oct 12 15:32 pilotlog.txt
[2025-10-12 15:32:30] -rw-r--r--. 1 boincer umatlas        28 Oct 12 15:32 wrapper_checkpoint.txt
[2025-10-12 15:32:30] -rw-------. 1 boincer umatlas   1708184 Oct 12 15:32 log.46676269._078737.job.log.1
[2025-10-12 15:32:30] -rw-------. 1 boincer umatlas       357 Oct 12 15:32 output.list
[2025-10-12 15:32:30] -rw-r--r--. 1 boincer umatlas       620 Oct 12 15:32 runtime_log
[2025-10-12 15:32:30] -rw-------. 1 boincer umatlas   2181120 Oct 12 15:32 result.tar.gz
[2025-10-12 15:32:30] -rw-------. 1 boincer umatlas       653 Oct 12 15:32 VBwMDmAkAS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmdvTMDm9uQOUo.diag
[2025-10-12 15:32:30] -rw-r--r--. 1 boincer umatlas      8689 Oct 12 15:32 runtime_log.err
[2025-10-12 15:32:30] -rw-r--r--. 1 boincer umatlas     21249 Oct 12 15:32 stderr.txt
[2025-10-12 15:32:30] HITS file was successfully produced:
[2025-10-12 15:32:30] -rw-------. 1 boincer umatlas 200127138 Oct 12 15:29 shared/HITS.pool.root.1
[2025-10-12 15:32:30]  *** Contents of shared directory: ***
[2025-10-12 15:32:30] total 412748
[2025-10-12 15:32:30] -rw-r--r--. 2 boincer umatlas 219742147 Oct 12 11:24 ATLAS.root_0
[2025-10-12 15:32:30] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 11:24 start_atlas.sh
[2025-10-12 15:32:30] -rw-r--r--. 2 boincer umatlas    569679 Oct 12 11:24 input.tar.gz
[2025-10-12 15:32:30] -rw-------. 1 boincer umatlas 200127138 Oct 12 15:29 HITS.pool.root.1
[2025-10-12 15:32:30] -rw-------. 1 boincer umatlas   2181120 Oct 12 15:32 result.tar.gz
15:32:32 (3428520): run_atlas exited; CPU time 46619.497520
15:32:32 (3428520): called boinc_finish(0)

</stderr_txt>
]]>

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