Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:14:35 (3204832): wrapper (7.7.26015): starting
23:14:35 (3204832): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 23:14:35] Arguments: --nthreads 8
[2025-10-12 23:14:35] Threads: 8
[2025-10-12 23:14:35] Checking for CVMFS
[2025-10-12 23:14:35] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 23:14:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 23:14:35] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 23:14:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 23:14:36] 2.13.2.0 1338992 4956 58764 151638 3 9 3190060 4097025 0 130560 0 5124000 99.993 172804 27351 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://188.184.28.244:3128 1
[2025-10-12 23:14:36] CVMFS is ok
[2025-10-12 23:14:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 23:14:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 23:14:36] Further information can be found at the LHC@home message board.
[2025-10-12 23:14:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 23:14:36] Checking for apptainer binary...
[2025-10-12 23:14:36] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2025-10-12 23:14:36] apptainer is not installed, using version from CVMFS
[2025-10-12 23:14:36] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 23:14:36] pckeatlas02
[2025-10-12 23:14:36] apptainer works
[2025-10-12 23:14:36] Set ATHENA_PROC_NUMBER=8
[2025-10-12 23:14:36] Set ATHENA_CORE_NUMBER=8
[2025-10-12 23:14:36] Starting ATLAS job with PandaID=6839867574
[2025-10-12 23:14:36] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/19 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 00:32:52]  *** The last 200 lines of the pilot log: ***
[2025-10-13 00:32:52]  lfn=log.46676269._076453.job.log.tgz.1
[2025-10-13 00:32:52]  mtime=0
[2025-10-13 00:32:52]  protocol_id=None
[2025-10-13 00:32:52]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-13 00:32:52]  replicas=None
[2025-10-13 00:32:52]  scope=mc23_13p6TeV
[2025-10-13 00:32:52]  status=None
[2025-10-13 00:32:52]  status_code=0
[2025-10-13 00:32:52]  storage_token=
[2025-10-13 00:32:52]  surl=/var/lib/boinc/slots/19/PanDA_Pilot-6839867574/log.46676269._076453.job.log.tgz.1
[2025-10-13 00:32:52]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f9/a1/log.46676269._076453.job.log.tgz.1
[2025-10-13 00:32:52]  workdir=None
[2025-10-13 00:32:52] ]
[2025-10-13 00:32:52] 2025-10-12 22:32:03,052 | INFO     | transferring file log.46676269._076453.job.log.tgz.1 from /var/lib/boinc/slots/19/PanDA_Pilot-6839867574/log.46676269._076453.job.log.tgz.1 to /var/lib/boinc/slots
[2025-10-13 00:32:52] 2025-10-12 22:32:03,052 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/19/PanDA_Pilot-6839867574/log.46676269._076453.job.log.tgz.1 /var/lib/boinc/slots/19/log.46676269._076453.j
[2025-10-13 00:32:52] 2025-10-12 22:32:03,059 | INFO     | adding to output.list: log.46676269._076453.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f9/a1/log.46676269._076453.job.log.tg
[2025-10-13 00:32:52] 2025-10-12 22:32:03,060 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-13 00:32:52] 2025-10-12 22:32:03,060 | INFO     | summary of transferred files:
[2025-10-13 00:32:52] 2025-10-12 22:32:03,060 | INFO     |  -- lfn=log.46676269._076453.job.log.tgz.1, status_code=0, status=transferred
[2025-10-13 00:32:52] 2025-10-12 22:32:03,060 | INFO     | stage-out finished correctly
[2025-10-13 00:32:52] 2025-10-12 22:32:03,436 | INFO     | time since job start (4643s) is within the limit (172800.0s)
[2025-10-13 00:32:52] 2025-10-12 22:32:04,202 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-13 00:32:52] 2025-10-12 22:32:04,556 | INFO     | job 6839867574 has state=finished
[2025-10-13 00:32:52] 2025-10-12 22:32:04,557 | INFO     | preparing for final server update for job 6839867574 in state='finished'
[2025-10-13 00:32:52] 2025-10-12 22:32:04,557 | INFO     | this job has now completed (state=finished)
[2025-10-13 00:32:52] 2025-10-12 22:32:04,557 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 00:32:52] 2025-10-12 22:32:04,557 | INFO     | log transfer has been attempted: DONE
[2025-10-13 00:32:52] 2025-10-12 22:32:04,557 | INFO     | job 6839867574 has finished - writing final server update
[2025-10-13 00:32:52] 2025-10-12 22:32:04,557 | INFO     | total number of processed events: 400 (read)
[2025-10-13 00:32:52] 2025-10-12 22:32:04,558 | INFO     | executing command: lscpu
[2025-10-13 00:32:52] 2025-10-12 22:32:04,565 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 00:32:52] 2025-10-12 22:32:05,441 | INFO     | time since job start (4645s) is within the limit (172800.0s)
[2025-10-13 00:32:52] 2025-10-12 22:32:07,211 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-13 00:32:52] 2025-10-12 22:32:07,212 | INFO     | found 4 cores (4 cores per socket, 1 socket) HT, CPU MHz: 3827.32075
[2025-10-13 00:32:52] 2025-10-12 22:32:07,213 | INFO     | using path: /var/lib/boinc/slots/19/PanDA_Pilot-6839867574/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 00:32:52] 2025-10-12 22:32:07,213 | INFO     | extracted standard info from prmon json
[2025-10-13 00:32:52] 2025-10-12 22:32:07,213 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 00:32:52] 2025-10-12 22:32:07,213 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 00:32:52] 2025-10-12 22:32:07,213 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 00:32:52] 2025-10-12 22:32:07,213 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 00:32:52] 2025-10-12 22:32:07,214 | INFO     | fitting pss+swap vs Time
[2025-10-13 00:32:52] 2025-10-12 22:32:07,214 | INFO     | sum of square deviations: 101843770.0
[2025-10-13 00:32:52] 2025-10-12 22:32:07,214 | INFO     | sum of deviations: -13675550899.000004
[2025-10-13 00:32:52] 2025-10-12 22:32:07,214 | INFO     | mean x: 1760306078.0
[2025-10-13 00:32:52] 2025-10-12 22:32:07,215 | INFO     | mean y: 2810772.072463768
[2025-10-13 00:32:52] 2025-10-12 22:32:07,215 | INFO     | -- intersect: 236376183119.81714
[2025-10-13 00:32:52] 2025-10-12 22:32:07,215 | INFO     | intersect: 236376183119.81714
[2025-10-13 00:32:52] 2025-10-12 22:32:07,215 | INFO     | chi2: 0.10911201771688675
[2025-10-13 00:32:52] 2025-10-12 22:32:07,215 | INFO     | -- intersect: 236376183119.81714
[2025-10-13 00:32:52] 2025-10-12 22:32:07,215 | INFO     | current memory leak: -134.28 B/s (using 69 data points, chi2=0.11)
[2025-10-13 00:32:52] 2025-10-12 22:32:07,215 | INFO     | could have reported an average CPU frequency of 3758 MHz (6 samples)
[2025-10-13 00:32:52] 2025-10-12 22:32:07,215 | INFO     | ..............................
[2025-10-13 00:32:52] 2025-10-12 22:32:07,215 | INFO     | . Timing measurements:
[2025-10-13 00:32:52] 2025-10-12 22:32:07,215 | INFO     | . get job = 0 s
[2025-10-13 00:32:52] 2025-10-12 22:32:07,215 | INFO     | . initial setup = 0 s
[2025-10-13 00:32:52] 2025-10-12 22:32:07,215 | INFO     | . payload setup = 3 s
[2025-10-13 00:32:52] 2025-10-12 22:32:07,215 | INFO     | . stage-in = 0 s
[2025-10-13 00:32:52] 2025-10-12 22:32:07,215 | INFO     | . payload execution = 4622 s
[2025-10-13 00:32:52] 2025-10-12 22:32:07,215 | INFO     | . stage-out = 0 s
[2025-10-13 00:32:52] 2025-10-12 22:32:07,215 | INFO     | . log creation = 0 s
[2025-10-13 00:32:52] 2025-10-12 22:32:07,215 | INFO     | ..............................
[2025-10-13 00:32:52] 2025-10-12 22:32:07,252 | INFO     | 
[2025-10-13 00:32:52] 2025-10-12 22:32:07,252 | INFO     | job summary report
[2025-10-13 00:32:52] 2025-10-12 22:32:07,252 | INFO     | --------------------------------------------------
[2025-10-13 00:32:52] 2025-10-12 22:32:07,252 | INFO     | PanDA job id: 6839867574
[2025-10-13 00:32:52] 2025-10-12 22:32:07,252 | INFO     | task id: 46676269
[2025-10-13 00:32:52] 2025-10-12 22:32:07,252 | INFO     | errors: (none)
[2025-10-13 00:32:52] 2025-10-12 22:32:07,252 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 00:32:52] 2025-10-12 22:32:07,252 | INFO     | pilot state: finished 
[2025-10-13 00:32:52] 2025-10-12 22:32:07,252 | INFO     | transexitcode: 0
[2025-10-13 00:32:52] 2025-10-12 22:32:07,252 | INFO     | exeerrorcode: 0
[2025-10-13 00:32:52] 2025-10-12 22:32:07,252 | INFO     | exeerrordiag: 
[2025-10-13 00:32:52] 2025-10-12 22:32:07,252 | INFO     | exitcode: 0
[2025-10-13 00:32:52] 2025-10-12 22:32:07,252 | INFO     | exitmsg: OK
[2025-10-13 00:32:52] 2025-10-12 22:32:07,253 | INFO     | cpuconsumptiontime: 34948 s
[2025-10-13 00:32:52] 2025-10-12 22:32:07,253 | INFO     | nevents: 400
[2025-10-13 00:32:52] 2025-10-12 22:32:07,253 | INFO     | neventsw: 0
[2025-10-13 00:32:52] 2025-10-12 22:32:07,253 | INFO     | pid: 3215855
[2025-10-13 00:32:52] 2025-10-12 22:32:07,253 | INFO     | pgrp: 3215855
[2025-10-13 00:32:52] 2025-10-12 22:32:07,253 | INFO     | corecount: 8
[2025-10-13 00:32:52] 2025-10-12 22:32:07,253 | INFO     | event service: False
[2025-10-13 00:32:52] 2025-10-12 22:32:07,253 | INFO     | sizes: {0: 2348858, 2: 2349120, 11: 2349148, 4629: 2375406, 4631: 2384406, 4632: 2384462, 4635: 2384784}
[2025-10-13 00:32:52] 2025-10-12 22:32:07,253 | INFO     | --------------------------------------------------
[2025-10-13 00:32:52] 2025-10-12 22:32:07,253 | INFO     | 
[2025-10-13 00:32:52] 2025-10-12 22:32:07,253 | INFO     | executing command: ls -lF /var/lib/boinc/slots/19
[2025-10-13 00:32:52] 2025-10-12 22:32:07,261 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 00:32:52] 2025-10-12 22:32:07,261 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 00:32:52] 2025-10-12 22:32:07,261 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 00:32:52] 2025-10-12 22:32:07,261 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 00:32:52] 2025-10-12 22:32:07,261 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 00:32:52] 2025-10-12 22:32:07,261 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 00:32:52] 2025-10-12 22:32:07,261 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 00:32:52] 2025-10-12 22:32:07,261 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 00:32:52] 2025-10-12 22:32:07,261 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 00:32:52] 2025-10-12 22:32:07,261 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 00:32:52] 2025-10-12 22:32:07,261 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 00:32:52] 2025-10-12 22:32:07,261 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 00:32:52] 2025-10-12 22:32:07,261 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 00:32:52] 2025-10-12 22:32:07,261 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 00:32:52] 2025-10-12 22:32:07,261 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 00:32:52] 2025-10-12 22:32:07,261 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 00:32:52] 2025-10-12 22:32:07,261 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 00:32:52] 2025-10-12 22:32:07,261 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 00:32:52] 2025-10-12 22:32:07,261 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 00:32:52] 2025-10-12 22:32:07,262 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 00:32:52] 2025-10-12 22:32:07,262 | INFO     | job 6839867574 has completed (purged errors)
[2025-10-13 00:32:52] 2025-10-12 22:32:07,262 | INFO     | overall cleanup function is called
[2025-10-13 00:32:52] 2025-10-12 22:32:08,268 | INFO     | --- collectZombieJob: --- 10, [3215855]
[2025-10-13 00:32:52] 2025-10-12 22:32:08,268 | INFO     | zombie collector waiting for pid 3215855
[2025-10-13 00:32:52] 2025-10-12 22:32:08,268 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 00:32:52] 2025-10-12 22:32:08,268 | INFO     | collected zombie processes
[2025-10-13 00:32:52] 2025-10-12 22:32:08,268 | INFO     | will attempt to kill all subprocesses of pid=3215855
[2025-10-13 00:32:52] 2025-10-12 22:32:08,300 | INFO     | process IDs to be killed: [3215855] (in reverse order)
[2025-10-13 00:32:52] 2025-10-12 22:32:08,316 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 00:32:52] 2025-10-12 22:32:08,316 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 00:32:52] 2025-10-12 22:32:08,317 | INFO     | did not find any defunct processes belonging to 3215855
[2025-10-13 00:32:52] 2025-10-12 22:32:08,317 | INFO     | did not find any defunct processes belonging to 3215855
[2025-10-13 00:32:52] 2025-10-12 22:32:08,318 | INFO     | ready for new job
[2025-10-13 00:32:52] 2025-10-12 22:32:08,318 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 00:32:52] 2025-10-12 22:32:08,318 | INFO     | ***************************************
[2025-10-13 00:32:52] 2025-10-12 22:32:08,318 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 00:32:52] 2025-10-12 22:32:08,318 | INFO     | ***************************************
[2025-10-13 00:32:52] 2025-10-12 22:32:08,318 | INFO     | 
[2025-10-13 00:32:52] 2025-10-12 22:32:08,319 | INFO     | architecture information:
[2025-10-13 00:32:52] 2025-10-12 22:32:08,319 | INFO     | executing command: cat /etc/os-release
[2025-10-13 00:32:52] 2025-10-12 22:32:08,324 | INFO     | cat /etc/os-release:
[2025-10-13 00:32:52] NAME="CentOS Linux"
[2025-10-13 00:32:52] VERSION="7 (Core)"
[2025-10-13 00:32:52] ID="centos"
[2025-10-13 00:32:52] ID_LIKE="rhel fedora"
[2025-10-13 00:32:52] VERSION_ID="7"
[2025-10-13 00:32:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 00:32:52] ANSI_COLOR="0;31"
[2025-10-13 00:32:52] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 00:32:52] HOME_URL="https://www.centos.org/"
[2025-10-13 00:32:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 00:32:52] 
[2025-10-13 00:32:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 00:32:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 00:32:52] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 00:32:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 00:32:52] 
[2025-10-13 00:32:52] 2025-10-12 22:32:08,324 | INFO     | ***************************************
[2025-10-13 00:32:52] 2025-10-12 22:32:08,573 | WARNING  | process 3215855 can no longer be monitored (due to stat problems) - aborting
[2025-10-13 00:32:52] 2025-10-12 22:32:08,598 | INFO     | using path: /var/lib/boinc/slots/19/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 00:32:52] 2025-10-12 22:32:08,629 | INFO     | number of running child processes to parent process 3215855: 1
[2025-10-13 00:32:52] 2025-10-12 22:32:08,629 | INFO     | maximum number of monitored processes: 6
[2025-10-13 00:32:52] 2025-10-12 22:32:08,629 | INFO     | aborting job monitoring since job object (job id=6839867574) has expired
[2025-10-13 00:32:52] 2025-10-12 22:32:08,827 | INFO     | executing command: df -mP /var/lib/boinc/slots/19
[2025-10-13 00:32:52] 2025-10-12 22:32:08,834 | INFO     | sufficient remaining disk space (118244769792 B)
[2025-10-13 00:32:52] 2025-10-12 22:32:08,834 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 00:32:52] 2025-10-12 22:32:08,834 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 00:32:52] 2025-10-12 22:32:08,834 | INFO     | update_server=False
[2025-10-13 00:32:52] 2025-10-12 22:32:08,834 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 00:32:52] 2025-10-12 22:32:08,834 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 00:32:52] 2025-10-12 22:32:08,834 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 00:32:52] 2025-10-12 22:32:08,834 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 00:32:52] 2025-10-12 22:32:08,835 | INFO     | will abort loop
[2025-10-13 00:32:52] 2025-10-12 22:32:09,617 | INFO     | all data control threads have been joined
[2025-10-13 00:32:52] 2025-10-12 22:32:09,769 | INFO     | all payload control threads have been joined
[2025-10-13 00:32:52] 2025-10-12 22:32:09,769 | INFO     | all job control threads have been joined
[2025-10-13 00:32:52] 2025-10-12 22:32:09,839 | INFO     | [job] retrieve thread has finished
[2025-10-13 00:32:52] 2025-10-12 22:32:09,840 | INFO     | [job] queue monitor thread has finished
[2025-10-13 00:32:52] 2025-10-12 22:32:09,840 | INFO     | [job] job monitor thread has finished
[2025-10-13 00:32:52] 2025-10-12 22:32:10,242 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 00:32:52] 2025-10-12 22:32:10,440 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 00:32:52] 2025-10-12 22:32:10,442 | INFO     | [job] validate thread has finished
[2025-10-13 00:32:52] 2025-10-12 22:32:10,509 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 00:32:52] 2025-10-12 22:32:10,550 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 00:32:52] 2025-10-12 22:32:10,623 | INFO     | [data] control thread has finished
[2025-10-13 00:32:52] 2025-10-12 22:32:10,774 | INFO     | [payload] control thread has finished
[2025-10-13 00:32:52] 2025-10-12 22:32:10,775 | INFO     | [job] control thread has finished
[2025-10-13 00:32:52] 2025-10-12 22:32:10,840 | INFO     | [data] copytool_out thread has finished
[2025-10-13 00:32:52] 2025-10-12 22:32:10,859 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 00:32:52] 2025-10-12 22:32:10,950 | INFO     | [data] copytool_in thread has finished
[2025-10-13 00:32:52] 2025-10-12 22:32:10,975 | INFO     | [payload] validate_post thread has finished
[2025-10-13 00:32:52] 2025-10-12 22:32:11,333 | INFO     | [payload] failed_post thread has finished
[2025-10-13 00:32:52] 2025-10-12 22:32:14,247 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 00:32:52] 2025-10-12 22:32:38,575 | INFO     | PID=3208566 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 00:32:52] 2025-10-12 22:32:38,576 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 00:32:52] 2025-10-12 22:32:38,576 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 00:32:52] 2025-10-12 22:32:38,576 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 00:32:52] 2025-10-12 22:32:47,444 | INFO     | [monitor] cgroup control has ended
[2025-10-13 00:32:52] 2025-10-12 22:32:47,856 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140153227896640)>', '<ExcThread(monitor, started 140152525530880)>']
[2025-10-13 00:32:52] 2025-10-12 22:32:48,627 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 00:32:52] 2025-10-12 22:32:48,627 | INFO     | [monitor] control thread has ended
[2025-10-13 00:32:52] 2025-10-12 22:32:52,881 | INFO     | all workflow threads have been joined
[2025-10-13 00:32:52] 2025-10-12 22:32:52,881 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 00:32:52] 2025-10-12 22:32:52,881 | INFO     | traces error code: 0
[2025-10-13 00:32:52] 2025-10-12 22:32:52,882 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 00:32:52] 2025-10-12 22:32:52,939 [wrapper] ==== pilot stdout END ====
[2025-10-13 00:32:52] 2025-10-12 22:32:52,940 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 00:32:52] 2025-10-12 22:32:52,941 [wrapper] pilotpid: 3208566
[2025-10-13 00:32:52] 2025-10-12 22:32:52,942 [wrapper] Pilot exit status: 0
[2025-10-13 00:32:52] 2025-10-12 22:32:52,947 [wrapper] pandaids: 6839867574
[2025-10-13 00:32:52] 2025-10-12 22:32:52,956 [wrapper] cleanup supervisor_pilot 3233286 3208567
[2025-10-13 00:32:52] 2025-10-12 22:32:52,957 [wrapper] Test setup, not cleaning
[2025-10-13 00:32:52] 2025-10-12 22:32:52,958 [wrapper] apfmon messages muted
[2025-10-13 00:32:52] 2025-10-12 22:32:52,959 [wrapper] ==== wrapper stdout END ====
[2025-10-13 00:32:52] 2025-10-12 22:32:52,960 [wrapper] ==== wrapper stderr END ====
[2025-10-13 00:32:52]  *** Error codes and diagnostics ***
[2025-10-13 00:32:52]     "exeErrorCode": 0,
[2025-10-13 00:32:52]     "exeErrorDiag": "",
[2025-10-13 00:32:52]     "pilotErrorCode": 0,
[2025-10-13 00:32:52]     "pilotErrorDiag": "",
[2025-10-13 00:32:52]  *** Listing of results directory ***
[2025-10-13 00:32:52] total 406856
[2025-10-13 00:32:52] -rw-r--r--. 1 boinc boinc      5112 Oct 12 12:56 queuedata.json
[2025-10-13 00:32:52] -rw-r--r--. 1 boinc boinc    557409 Oct 12 12:57 pilot3.tar.gz
[2025-10-13 00:32:52] -rwx------. 1 boinc boinc     36292 Oct 12 12:57 runpilot2-wrapper.sh
[2025-10-13 00:32:52] -rw-r--r--. 1 boinc boinc       100 Oct 12 23:14 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 00:32:52] -rwxr-xr-x. 1 boinc boinc      7986 Oct 12 23:14 run_atlas
[2025-10-13 00:32:52] -rw-r--r--. 1 boinc boinc       105 Oct 12 23:14 job.xml
[2025-10-13 00:32:52] -rw-r--r--. 1 boinc boinc      6275 Oct 12 23:14 init_data.xml
[2025-10-13 00:32:52] -rw-r--r--. 2 boinc boinc 219261029 Oct 12 23:14 EVNT.46676267._003638.pool.root.1
[2025-10-13 00:32:52] -rw-r--r--. 2 boinc boinc     15120 Oct 12 23:14 start_atlas.sh
[2025-10-13 00:32:52] drwxrwx--x. 2 boinc boinc        68 Oct 12 23:14 shared
[2025-10-13 00:32:52] -rw-r--r--. 2 boinc boinc    569678 Oct 12 23:14 input.tar.gz
[2025-10-13 00:32:52] -rw-r--r--. 1 boinc boinc         0 Oct 12 23:14 boinc_lockfile
[2025-10-13 00:32:52] -rw-r--r--. 1 boinc boinc      2550 Oct 12 23:14 pandaJob.out
[2025-10-13 00:32:52] -rw-------. 1 boinc boinc    975528 Oct 12 23:14 agis_schedconf.cvmfs.json
[2025-10-13 00:32:52] -rw-------. 1 boinc boinc   1560580 Oct 12 23:14 agis_ddmendpoints.agis.ALL.json
[2025-10-13 00:32:52] drwx------. 5 boinc boinc      4096 Oct 12 23:14 pilot3
[2025-10-13 00:32:52] -rw-------. 1 boinc boinc 191458942 Oct 13 00:31 HITS.46676269._076453.pool.root.1
[2025-10-13 00:32:52] -rw-r--r--. 1 boinc boinc       529 Oct 13 00:31 boinc_task_state.xml
[2025-10-13 00:32:52] -rw-------. 1 boinc boinc      1014 Oct 13 00:31 memory_monitor_summary.json
[2025-10-13 00:32:52] -rw-------. 1 boinc boinc    325491 Oct 13 00:32 log.46676269._076453.job.log.tgz.1
[2025-10-13 00:32:52] -rw-------. 1 boinc boinc      7775 Oct 13 00:32 heartbeat.json
[2025-10-13 00:32:52] -rw-------. 1 boinc boinc        95 Oct 13 00:32 pilot_heartbeat.json
[2025-10-13 00:32:52] -rw-r--r--. 1 boinc boinc      8192 Oct 13 00:32 boinc_mmap_file
[2025-10-13 00:32:52] -rw-r--r--. 1 boinc boinc        27 Oct 13 00:32 wrapper_checkpoint.txt
[2025-10-13 00:32:52] -rw-------. 1 boinc boinc      5272 Oct 13 00:32 pilotlog.txt
[2025-10-13 00:32:52] -rw-------. 1 boinc boinc    683835 Oct 13 00:32 log.46676269._076453.job.log.1
[2025-10-13 00:32:52] -rw-------. 1 boinc boinc       357 Oct 13 00:32 output.list
[2025-10-13 00:32:52] -rw-r--r--. 1 boinc boinc       620 Oct 13 00:32 runtime_log
[2025-10-13 00:32:52] -rw-------. 1 boinc boinc   1024000 Oct 13 00:32 result.tar.gz
[2025-10-13 00:32:52] -rw-r--r--. 1 boinc boinc      8730 Oct 13 00:32 runtime_log.err
[2025-10-13 00:32:52] -rw-------. 1 boinc boinc       651 Oct 13 00:32 QC9LDmzw8R8n9Rq4apOajLDm4fhM0noT9bVof3QYDmvhTMDmZrdgHn.diag
[2025-10-13 00:32:52] -rw-r--r--. 1 boinc boinc     21743 Oct 13 00:32 stderr.txt
[2025-10-13 00:32:52] HITS file was successfully produced:
[2025-10-13 00:32:52] -rw-------. 1 boinc boinc 191458942 Oct 13 00:31 shared/HITS.pool.root.1
[2025-10-13 00:32:52]  *** Contents of shared directory: ***
[2025-10-13 00:32:53] total 402672
[2025-10-13 00:32:53] -rw-r--r--. 2 boinc boinc 219261029 Oct 12 23:14 ATLAS.root_0
[2025-10-13 00:32:53] -rw-r--r--. 2 boinc boinc     15120 Oct 12 23:14 start_atlas.sh
[2025-10-13 00:32:53] -rw-r--r--. 2 boinc boinc    569678 Oct 12 23:14 input.tar.gz
[2025-10-13 00:32:53] -rw-------. 1 boinc boinc 191458942 Oct 13 00:31 HITS.pool.root.1
[2025-10-13 00:32:53] -rw-------. 1 boinc boinc   1024000 Oct 13 00:32 result.tar.gz
00:32:54 (3204832): run_atlas exited; CPU time 34983.250912
00:32:54 (3204832): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN