Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:18:10 (2559455): wrapper (7.7.26015): starting
10:18:10 (2559455): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 10:18:10] Arguments: --nthreads 8
[2025-10-12 10:18:10] Threads: 8
[2025-10-12 10:18:10] Checking for CVMFS
[2025-10-12 10:18:11] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 10:18:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 10:18:11] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 10:18:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 10:18:12] 2.13.2.0 4167112 129370 482360 151623 1 427 32441866 32935936 40610 16776704 0 456024186 99.675 375890518 17036 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 10:18:12] CVMFS is ok
[2025-10-12 10:18:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 10:18:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 10:18:12] Further information can be found at the LHC@home message board.
[2025-10-12 10:18:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 10:18:12] Checking for apptainer binary...
[2025-10-12 10:18:12] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 10:18:12] Running /usr/bin/apptainer --version
[2025-10-12 10:18:12] apptainer version 1.4.3-1.el9
[2025-10-12 10:18:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 10:18:12] c7-16-8.aglt2.org
[2025-10-12 10:18:12] apptainer works
[2025-10-12 10:18:12] Set ATHENA_PROC_NUMBER=8
[2025-10-12 10:18:12] Set ATHENA_CORE_NUMBER=8
[2025-10-12 10:18:13] Starting ATLAS job with PandaID=6839659679
[2025-10-12 10:18:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 14:29:28]  *** The last 200 lines of the pilot log: ***
[2025-10-12 14:29:28] 2025-10-12 18:28:35,075 | INFO     | current chi2=0.8748127983135672 (change=77.81731176069063 %)
[2025-10-12 14:29:28] 2025-10-12 18:28:35,076 | INFO     | sum of square deviations: 3972995617.777759
[2025-10-12 14:29:28] 2025-10-12 18:28:35,077 | INFO     | sum of deviations: 24659923334.66666
[2025-10-12 14:29:28] 2025-10-12 18:28:35,077 | INFO     | mean x: 1760286524.5555556
[2025-10-12 14:29:28] 2025-10-12 18:28:35,077 | INFO     | mean y: 2428027.5256410255
[2025-10-12 14:29:28] 2025-10-12 18:28:35,077 | INFO     | -- intersect: -10923466415.53614
[2025-10-12 14:29:28] 2025-10-12 18:28:35,078 | INFO     | intersect: -10923466415.53614
[2025-10-12 14:29:28] 2025-10-12 18:28:35,078 | INFO     | chi2: 0.3594218515272316
[2025-10-12 14:29:28] 2025-10-12 18:28:35,078 | INFO     | current chi2=0.3594218515272316 (change=58.91442692423885 %)
[2025-10-12 14:29:28] 2025-10-12 18:28:35,078 | INFO     | sum of square deviations: 3723712560.262001
[2025-10-12 14:29:28] 2025-10-12 18:28:35,100 | INFO     | sum of deviations: 6307396489.624454
[2025-10-12 14:29:28] 2025-10-12 18:28:35,100 | INFO     | mean x: 1760286677.0567687
[2025-10-12 14:29:28] 2025-10-12 18:28:35,100 | INFO     | mean y: 2439238.9519650657
[2025-10-12 14:29:28] 2025-10-12 18:28:35,100 | INFO     | -- intersect: -2979215716.3970485
[2025-10-12 14:29:28] 2025-10-12 18:28:35,101 | INFO     | intersect: -2979215716.3970485
[2025-10-12 14:29:28] 2025-10-12 18:28:35,101 | INFO     | chi2: 0.1393274579731291
[2025-10-12 14:29:28] 2025-10-12 18:28:35,101 | INFO     | current chi2=0.1393274579731291 (change=61.2356740745984 %)
[2025-10-12 14:29:28] 2025-10-12 18:28:35,101 | INFO     | sum of square deviations: 3485094955.357131
[2025-10-12 14:29:28] 2025-10-12 18:28:35,103 | INFO     | sum of deviations: -3886179661.3392925
[2025-10-12 14:29:28] 2025-10-12 18:28:35,132 | INFO     | mean x: 1760286829.5535715
[2025-10-12 14:29:28] 2025-10-12 18:28:35,132 | INFO     | mean y: 2445736.7366071427
[2025-10-12 14:29:28] 2025-10-12 18:28:35,132 | INFO     | -- intersect: 1965316465.586953
[2025-10-12 14:29:28] 2025-10-12 18:28:35,132 | INFO     | intersect: 1965316465.586953
[2025-10-12 14:29:28] 2025-10-12 18:28:35,133 | INFO     | chi2: 0.06124289502181562
[2025-10-12 14:29:28] 2025-10-12 18:28:35,133 | INFO     | current chi2=0.06124289502181562 (change=56.04391559801011 %)
[2025-10-12 14:29:28] 2025-10-12 18:28:35,133 | INFO     | sum of square deviations: 3256882365.3424664
[2025-10-12 14:29:28] 2025-10-12 18:28:35,134 | INFO     | sum of deviations: -6868650412.000006
[2025-10-12 14:29:28] 2025-10-12 18:28:35,135 | INFO     | mean x: 1760286982.0547945
[2025-10-12 14:29:28] 2025-10-12 18:28:35,135 | INFO     | mean y: 2447697.0
[2025-10-12 14:29:28] 2025-10-12 18:28:35,135 | INFO     | -- intersect: 3714831058.828159
[2025-10-12 14:29:28] 2025-10-12 18:28:35,135 | INFO     | intersect: 3714831058.828159
[2025-10-12 14:29:28] 2025-10-12 18:28:35,135 | INFO     | chi2: 0.03951887873649321
[2025-10-12 14:29:28] 2025-10-12 18:28:35,135 | INFO     | current chi2=0.03951887873649321 (change=35.47189641767261 %)
[2025-10-12 14:29:28] 2025-10-12 18:28:35,135 | INFO     | sum of square deviations: 3038856012.8271227
[2025-10-12 14:29:28] 2025-10-12 18:28:35,160 | INFO     | sum of deviations: -5502855117.761681
[2025-10-12 14:29:28] 2025-10-12 18:28:35,160 | INFO     | mean x: 1760287134.5560749
[2025-10-12 14:29:28] 2025-10-12 18:28:35,160 | INFO     | mean y: 2446739.855140187
[2025-10-12 14:29:28] 2025-10-12 18:28:35,160 | INFO     | -- intersect: 3190029509.8957167
[2025-10-12 14:29:28] 2025-10-12 18:28:35,160 | INFO     | intersect: 3190029509.8957167
[2025-10-12 14:29:28] 2025-10-12 18:28:35,161 | INFO     | chi2: 0.038873450573680815
[2025-10-12 14:29:28] 2025-10-12 18:28:35,161 | INFO     | current chi2=0.038873450573680815 (change=1.633214765823757 %)
[2025-10-12 14:29:28] 2025-10-12 18:28:35,161 | INFO     | left removable region: 60
[2025-10-12 14:29:28] 2025-10-12 18:28:35,161 | INFO     | sum of square deviations: 1748724980.1404538
[2025-10-12 14:29:28] 2025-10-12 18:28:35,162 | INFO     | sum of deviations: 6623223411.58427
[2025-10-12 14:29:28] 2025-10-12 18:28:35,162 | INFO     | mean x: 1760287866.5449438
[2025-10-12 14:29:28] 2025-10-12 18:28:35,162 | INFO     | mean y: 2436148.4269662923
[2025-10-12 14:29:28] 2025-10-12 18:28:35,162 | INFO     | -- intersect: -6664581216.357168
[2025-10-12 14:29:28] 2025-10-12 18:28:35,163 | INFO     | intersect: -6664581216.357168
[2025-10-12 14:29:28] 2025-10-12 18:28:35,180 | INFO     | chi2: 0.001230161571524954
[2025-10-12 14:29:28] 2025-10-12 18:28:35,180 | INFO     | -- intersect: -6664581216.357168
[2025-10-12 14:29:28] 2025-10-12 18:28:35,180 | INFO     | current memory leak: 3.79 B/s (using 178 data points, chi2=0.00)
[2025-10-12 14:29:28] 2025-10-12 18:28:35,181 | INFO     | could have reported an average CPU frequency of 3027 MHz (12 samples)
[2025-10-12 14:29:28] 2025-10-12 18:28:35,181 | INFO     | ..............................
[2025-10-12 14:29:28] 2025-10-12 18:28:35,181 | INFO     | . Timing measurements:
[2025-10-12 14:29:28] 2025-10-12 18:28:35,182 | INFO     | . get job = 0 s
[2025-10-12 14:29:28] 2025-10-12 18:28:35,182 | INFO     | . initial setup = 5 s
[2025-10-12 14:29:28] 2025-10-12 18:28:35,182 | INFO     | . payload setup = 25 s
[2025-10-12 14:29:28] 2025-10-12 18:28:35,182 | INFO     | . stage-in = 0 s
[2025-10-12 14:29:28] 2025-10-12 18:28:35,182 | INFO     | . payload execution = 14896 s
[2025-10-12 14:29:28] 2025-10-12 18:28:35,182 | INFO     | . stage-out = 6 s
[2025-10-12 14:29:28] 2025-10-12 18:28:35,182 | INFO     | . log creation = 0 s
[2025-10-12 14:29:28] 2025-10-12 18:28:35,182 | INFO     | ..............................
[2025-10-12 14:29:28] 2025-10-12 18:28:35,591 | INFO     | time since job start (14982s) is within the limit (172800.0s)
[2025-10-12 14:29:28] 2025-10-12 18:28:35,642 | INFO     | 
[2025-10-12 14:29:28] 2025-10-12 18:28:35,651 | INFO     | job summary report
[2025-10-12 14:29:28] 2025-10-12 18:28:35,651 | INFO     | --------------------------------------------------
[2025-10-12 14:29:28] 2025-10-12 18:28:35,652 | INFO     | PanDA job id: 6839659679
[2025-10-12 14:29:28] 2025-10-12 18:28:35,652 | INFO     | task id: 46676269
[2025-10-12 14:29:28] 2025-10-12 18:28:35,652 | INFO     | errors: (none)
[2025-10-12 14:29:28] 2025-10-12 18:28:35,652 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 14:29:28] 2025-10-12 18:28:35,652 | INFO     | pilot state: finished 
[2025-10-12 14:29:28] 2025-10-12 18:28:35,652 | INFO     | transexitcode: 0
[2025-10-12 14:29:28] 2025-10-12 18:28:35,652 | INFO     | exeerrorcode: 0
[2025-10-12 14:29:28] 2025-10-12 18:28:35,652 | INFO     | exeerrordiag: 
[2025-10-12 14:29:28] 2025-10-12 18:28:35,652 | INFO     | exitcode: 0
[2025-10-12 14:29:28] 2025-10-12 18:28:35,652 | INFO     | exitmsg: OK
[2025-10-12 14:29:28] 2025-10-12 18:28:35,652 | INFO     | cpuconsumptiontime: 34114 s
[2025-10-12 14:29:28] 2025-10-12 18:28:35,652 | INFO     | nevents: 400
[2025-10-12 14:29:28] 2025-10-12 18:28:35,652 | INFO     | neventsw: 0
[2025-10-12 14:29:28] 2025-10-12 18:28:35,652 | INFO     | pid: 2572274
[2025-10-12 14:29:28] 2025-10-12 18:28:35,653 | INFO     | pgrp: 2572274
[2025-10-12 14:29:28] 2025-10-12 18:28:35,653 | INFO     | corecount: 8
[2025-10-12 14:29:28] 2025-10-12 18:28:35,653 | INFO     | event service: False
[2025-10-12 14:29:28] 2025-10-12 18:28:35,653 | INFO     | sizes: {0: 2348029, 1: 2348885, 2: 2348885, 12: 2348913, 16: 2349203, 23: 2349231, 14926: 2380378, 14935: 2389376, 14937: 2389432, 14947: 2389626}
[2025-10-12 14:29:28] 2025-10-12 18:28:35,653 | INFO     | --------------------------------------------------
[2025-10-12 14:29:28] 2025-10-12 18:28:35,653 | INFO     | 
[2025-10-12 14:29:28] 2025-10-12 18:28:35,653 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-10-12 14:29:28] 2025-10-12 18:28:35,761 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 14:29:28] 2025-10-12 18:28:35,761 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 14:29:28] 2025-10-12 18:28:35,762 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 14:29:28] 2025-10-12 18:28:35,762 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 14:29:28] 2025-10-12 18:28:35,762 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 14:29:28] 2025-10-12 18:28:35,762 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 14:29:28] 2025-10-12 18:28:35,762 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 14:29:28] 2025-10-12 18:28:35,762 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 14:29:28] 2025-10-12 18:28:35,762 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 14:29:28] 2025-10-12 18:28:35,762 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 14:29:28] 2025-10-12 18:28:35,762 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 14:29:28] 2025-10-12 18:28:35,762 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 14:29:28] 2025-10-12 18:28:35,762 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 14:29:28] 2025-10-12 18:28:35,762 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 14:29:28] 2025-10-12 18:28:35,762 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 14:29:28] 2025-10-12 18:28:35,762 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 14:29:28] 2025-10-12 18:28:35,763 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 14:29:28] 2025-10-12 18:28:35,763 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 14:29:28] 2025-10-12 18:28:35,763 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 14:29:28] 2025-10-12 18:28:35,763 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 14:29:28] 2025-10-12 18:28:35,763 | INFO     | job 6839659679 has completed (purged errors)
[2025-10-12 14:29:28] 2025-10-12 18:28:35,763 | INFO     | overall cleanup function is called
[2025-10-12 14:29:28] 2025-10-12 18:28:36,773 | INFO     | --- collectZombieJob: --- 10, [2572274]
[2025-10-12 14:29:28] 2025-10-12 18:28:36,773 | INFO     | zombie collector waiting for pid 2572274
[2025-10-12 14:29:28] 2025-10-12 18:28:36,773 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 14:29:28] 2025-10-12 18:28:36,773 | INFO     | collected zombie processes
[2025-10-12 14:29:28] 2025-10-12 18:28:36,774 | INFO     | will attempt to kill all subprocesses of pid=2572274
[2025-10-12 14:29:28] 2025-10-12 18:28:37,814 | INFO     | process IDs to be killed: [2572274] (in reverse order)
[2025-10-12 14:29:28] 2025-10-12 18:28:38,178 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 14:29:28] 2025-10-12 18:28:38,178 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 14:29:28] 2025-10-12 18:28:38,205 | INFO     | did not find any defunct processes belonging to 2572274
[2025-10-12 14:29:28] 2025-10-12 18:28:38,229 | INFO     | did not find any defunct processes belonging to 2572274
[2025-10-12 14:29:28] 2025-10-12 18:28:38,229 | INFO     | ready for new job
[2025-10-12 14:29:28] 2025-10-12 18:28:38,229 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 14:29:28] 2025-10-12 18:28:38,261 | INFO     | ***************************************
[2025-10-12 14:29:28] 2025-10-12 18:28:38,261 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 14:29:28] 2025-10-12 18:28:38,261 | INFO     | ***************************************
[2025-10-12 14:29:28] 2025-10-12 18:28:38,261 | INFO     | 
[2025-10-12 14:29:28] 2025-10-12 18:28:38,283 | INFO     | architecture information:
[2025-10-12 14:29:28] 2025-10-12 18:28:38,283 | INFO     | executing command: cat /etc/os-release
[2025-10-12 14:29:28] 2025-10-12 18:28:38,376 | INFO     | cat /etc/os-release:
[2025-10-12 14:29:28] NAME="CentOS Linux"
[2025-10-12 14:29:28] VERSION="7 (Core)"
[2025-10-12 14:29:28] ID="centos"
[2025-10-12 14:29:28] ID_LIKE="rhel fedora"
[2025-10-12 14:29:28] VERSION_ID="7"
[2025-10-12 14:29:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 14:29:28] ANSI_COLOR="0;31"
[2025-10-12 14:29:28] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 14:29:28] HOME_URL="https://www.centos.org/"
[2025-10-12 14:29:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 14:29:28] 
[2025-10-12 14:29:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 14:29:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 14:29:28] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 14:29:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 14:29:28] 
[2025-10-12 14:29:28] 2025-10-12 18:28:38,376 | INFO     | ***************************************
[2025-10-12 14:29:28] 2025-10-12 18:28:38,894 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-10-12 14:29:28] 2025-10-12 18:28:38,967 | INFO     | sufficient remaining disk space (74287415296 B)
[2025-10-12 14:29:28] 2025-10-12 18:28:38,967 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 14:29:28] 2025-10-12 18:28:38,968 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 14:29:28] 2025-10-12 18:28:38,968 | INFO     | update_server=False
[2025-10-12 14:29:28] 2025-10-12 18:28:38,968 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 14:29:28] 2025-10-12 18:28:39,244 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 14:29:28] 2025-10-12 18:28:39,244 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 14:29:28] 2025-10-12 18:28:39,245 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 14:29:28] 2025-10-12 18:28:39,245 | INFO     | will abort loop
[2025-10-12 14:29:28] 2025-10-12 18:28:39,359 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 14:29:28] 2025-10-12 18:28:39,895 | INFO     | all data control threads have been joined
[2025-10-12 14:29:28] 2025-10-12 18:28:39,974 | INFO     | [job] retrieve thread has finished
[2025-10-12 14:29:28] 2025-10-12 18:28:40,151 | INFO     | [payload] failed_post thread has finished
[2025-10-12 14:29:28] 2025-10-12 18:28:40,152 | INFO     | all payload control threads have been joined
[2025-10-12 14:29:28] 2025-10-12 18:28:40,205 | INFO     | [payload] validate_post thread has finished
[2025-10-12 14:29:28] 2025-10-12 18:28:40,265 | INFO     | [job] job monitor thread has finished
[2025-10-12 14:29:28] 2025-10-12 18:28:40,504 | INFO     | all job control threads have been joined
[2025-10-12 14:29:28] 2025-10-12 18:28:40,619 | INFO     | [data] copytool_in thread has finished
[2025-10-12 14:29:28] 2025-10-12 18:28:40,676 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 14:29:28] 2025-10-12 18:28:40,871 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 14:29:28] 2025-10-12 18:28:40,871 | INFO     | [job] validate thread has finished
[2025-10-12 14:29:28] 2025-10-12 18:28:40,890 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 14:29:28] 2025-10-12 18:28:40,928 | INFO     | [data] control thread has finished
[2025-10-12 14:29:28] 2025-10-12 18:28:41,150 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 14:29:28] 2025-10-12 18:28:41,158 | INFO     | [payload] control thread has finished
[2025-10-12 14:29:28] 2025-10-12 18:28:41,265 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 14:29:28] 2025-10-12 18:28:41,319 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 14:29:28] 2025-10-12 18:28:41,366 | INFO     | [data] copytool_out thread has finished
[2025-10-12 14:29:28] 2025-10-12 18:28:41,520 | INFO     | [job] control thread has finished
[2025-10-12 14:29:28] 2025-10-12 18:28:41,682 | INFO     | [job] queue monitor thread has finished
[2025-10-12 14:29:28] 2025-10-12 18:28:45,161 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 14:29:28] 2025-10-12 18:29:12,444 | INFO     | PID=2563887 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 14:29:28] 2025-10-12 18:29:12,444 | INFO     | .. there are 51 such processes running
[2025-10-12 14:29:28] 2025-10-12 18:29:12,445 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 14:29:28] 2025-10-12 18:29:12,445 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 14:29:28] 2025-10-12 18:29:12,445 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 14:29:28] 2025-10-12 18:29:19,013 | INFO     | [monitor] cgroup control has ended
[2025-10-12 14:29:28] 2025-10-12 18:29:20,869 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140150222763840)>', '<ExcThread(monitor, started 140149732136704)>']
[2025-10-12 14:29:28] 2025-10-12 18:29:21,552 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 14:29:28] 2025-10-12 18:29:21,552 | INFO     | [monitor] control thread has ended
[2025-10-12 14:29:28] 2025-10-12 18:29:25,898 | INFO     | all workflow threads have been joined
[2025-10-12 14:29:28] 2025-10-12 18:29:25,898 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 14:29:28] 2025-10-12 18:29:25,898 | INFO     | traces error code: 0
[2025-10-12 14:29:28] 2025-10-12 18:29:25,899 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 14:29:28] 2025-10-12 18:29:27,997 [wrapper] ==== pilot stdout END ====
[2025-10-12 14:29:28] 2025-10-12 18:29:28,001 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 14:29:28] 2025-10-12 18:29:28,004 [wrapper] pilotpid: 2563887
[2025-10-12 14:29:28] 2025-10-12 18:29:28,006 [wrapper] Pilot exit status: 0
[2025-10-12 14:29:28] 2025-10-12 18:29:28,035 [wrapper] pandaids: 6839659679
[2025-10-12 14:29:28] 2025-10-12 18:29:28,348 [wrapper] cleanup supervisor_pilot 3762415 2563888
[2025-10-12 14:29:28] 2025-10-12 18:29:28,419 [wrapper] Test setup, not cleaning
[2025-10-12 14:29:28] 2025-10-12 18:29:28,452 [wrapper] apfmon messages muted
[2025-10-12 14:29:28] 2025-10-12 18:29:28,487 [wrapper] ==== wrapper stdout END ====
[2025-10-12 14:29:28] 2025-10-12 18:29:28,566 [wrapper] ==== wrapper stderr END ====
[2025-10-12 14:29:28]  *** Error codes and diagnostics ***
[2025-10-12 14:29:28]     "exeErrorCode": 0,
[2025-10-12 14:29:28]     "exeErrorDiag": "",
[2025-10-12 14:29:28]     "pilotErrorCode": 0,
[2025-10-12 14:29:28]     "pilotErrorDiag": "",
[2025-10-12 14:29:28]  *** Listing of results directory ***
[2025-10-12 14:29:28] total 410960
[2025-10-12 14:29:28] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 02:54 pilot3.tar.gz
[2025-10-12 14:29:28] -rwx------. 1 boincer umatlas     36292 Oct 12 03:39 runpilot2-wrapper.sh
[2025-10-12 14:29:28] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 03:39 queuedata.json
[2025-10-12 14:29:28] -rw-r--r--. 1 boincer umatlas       100 Oct 12 10:18 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 14:29:28] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 10:18 run_atlas
[2025-10-12 14:29:28] -rw-r--r--. 1 boincer umatlas       105 Oct 12 10:18 job.xml
[2025-10-12 14:29:28] -rw-r--r--. 2 boincer umatlas 219061087 Oct 12 10:18 EVNT.46676267._003506.pool.root.1
[2025-10-12 14:29:28] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 10:18 start_atlas.sh
[2025-10-12 14:29:28] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 10:18 shared
[2025-10-12 14:29:28] -rw-r--r--. 2 boincer umatlas    569679 Oct 12 10:18 input.tar.gz
[2025-10-12 14:29:28] -rw-r--r--. 1 boincer umatlas         0 Oct 12 10:18 boinc_lockfile
[2025-10-12 14:29:28] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 10:18 pandaJob.out
[2025-10-12 14:29:28] -rw-------. 1 boincer umatlas    975528 Oct 12 10:18 agis_schedconf.cvmfs.json
[2025-10-12 14:29:28] drwx------. 5 boincer umatlas      4096 Oct 12 10:18 pilot3
[2025-10-12 14:29:28] -rw-r--r--. 1 boincer umatlas      6936 Oct 12 14:19 init_data.xml
[2025-10-12 14:29:28] -rw-------. 1 boincer umatlas 193027644 Oct 12 14:27 HITS.46676269._073658.pool.root.1
[2025-10-12 14:29:28] -rw-r--r--. 1 boincer umatlas       531 Oct 12 14:27 boinc_task_state.xml
[2025-10-12 14:29:28] -rw-------. 1 boincer umatlas      1042 Oct 12 14:28 memory_monitor_summary.json
[2025-10-12 14:29:28] -rw-------. 1 boincer umatlas   1560580 Oct 12 14:28 agis_ddmendpoints.agis.ALL.json
[2025-10-12 14:29:28] -rw-------. 1 boincer umatlas    476991 Oct 12 14:28 log.46676269._073658.job.log.tgz.1
[2025-10-12 14:29:28] -rw-------. 1 boincer umatlas      7796 Oct 12 14:28 heartbeat.json
[2025-10-12 14:29:28] -rw-------. 1 boincer umatlas        95 Oct 12 14:29 pilot_heartbeat.json
[2025-10-12 14:29:28] -rw-r--r--. 1 boincer umatlas        28 Oct 12 14:29 wrapper_checkpoint.txt
[2025-10-12 14:29:28] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 14:29 boinc_mmap_file
[2025-10-12 14:29:28] -rw-------. 1 boincer umatlas      5010 Oct 12 14:29 pilotlog.txt
[2025-10-12 14:29:28] -rw-------. 1 boincer umatlas   1939177 Oct 12 14:29 log.46676269._073658.job.log.1
[2025-10-12 14:29:28] -rw-------. 1 boincer umatlas       357 Oct 12 14:29 output.list
[2025-10-12 14:29:28] -rw-r--r--. 1 boincer umatlas       620 Oct 12 14:29 runtime_log
[2025-10-12 14:29:28] -rw-------. 1 boincer umatlas   2437120 Oct 12 14:29 result.tar.gz
[2025-10-12 14:29:28] -rw-r--r--. 1 boincer umatlas      8699 Oct 12 14:29 runtime_log.err
[2025-10-12 14:29:28] -rw-------. 1 boincer umatlas       659 Oct 12 14:29 MeJNDmoq5R8n9Rq4apOajLDm4fhM0noT9bVof3QYDm9STMDm1emovm.diag
[2025-10-12 14:29:28] -rw-r--r--. 1 boincer umatlas     21133 Oct 12 14:29 stderr.txt
[2025-10-12 14:29:28] HITS file was successfully produced:
[2025-10-12 14:29:28] -rw-------. 1 boincer umatlas 193027644 Oct 12 14:27 shared/HITS.pool.root.1
[2025-10-12 14:29:28]  *** Contents of shared directory: ***
[2025-10-12 14:29:28] total 405392
[2025-10-12 14:29:28] -rw-r--r--. 2 boincer umatlas 219061087 Oct 12 10:18 ATLAS.root_0
[2025-10-12 14:29:28] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 10:18 start_atlas.sh
[2025-10-12 14:29:28] -rw-r--r--. 2 boincer umatlas    569679 Oct 12 10:18 input.tar.gz
[2025-10-12 14:29:28] -rw-------. 1 boincer umatlas 193027644 Oct 12 14:27 HITS.pool.root.1
[2025-10-12 14:29:28] -rw-------. 1 boincer umatlas   2437120 Oct 12 14:29 result.tar.gz
14:29:30 (2559455): run_atlas exited; CPU time 34684.580406
14:29:30 (2559455): called boinc_finish(0)

</stderr_txt>
]]>

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