Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:16:57 (1190192): wrapper (7.7.26015): starting
19:16:57 (1190192): wrapper: running run_atlas (--nthreads 4)
[2025-10-13 19:16:57] Arguments: --nthreads 4
[2025-10-13 19:16:57] Threads: 4
[2025-10-13 19:16:57] Checking for CVMFS
[2025-10-13 19:16:57] No cvmfs_config command found, will try listing directly
[2025-10-13 19:16:57] CVMFS is ok
[2025-10-13 19:16:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 19:16:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 19:16:57] Further information can be found at the LHC@home message board.
[2025-10-13 19:16:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 19:16:57] Checking for apptainer binary...
[2025-10-13 19:16:57] which: no apptainer in ((null))
[2025-10-13 19:16:57] apptainer is not installed, using version from CVMFS
[2025-10-13 19:16:57] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 19:16:57] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot104/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut13.grid.cesnet.cz
[2025-10-13 19:16:57] apptainer works
[2025-10-13 19:16:57] Set ATHENA_PROC_NUMBER=4
[2025-10-13 19:16:57] Set ATHENA_CORE_NUMBER=4
[2025-10-13 19:16:57] Starting ATLAS job with PandaID=6839988511
[2025-10-13 19:16:57] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot104/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
20:55:13 (1477814): wrapper (7.7.26015): starting
20:55:13 (1477814): wrapper: running run_atlas (--nthreads 4)
[2025-10-13 20:55:13] Arguments: --nthreads 4
[2025-10-13 20:55:13] Threads: 4
[2025-10-13 20:55:13] This job has been restarted, cleaning up previous attempt
[2025-10-13 20:55:13] Checking for CVMFS
[2025-10-13 20:55:13] No cvmfs_config command found, will try listing directly
[2025-10-13 20:55:13] CVMFS is ok
[2025-10-13 20:55:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 20:55:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 20:55:13] Further information can be found at the LHC@home message board.
[2025-10-13 20:55:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 20:55:13] Checking for apptainer binary...
[2025-10-13 20:55:13] which: no apptainer in ((null))
[2025-10-13 20:55:13] apptainer is not installed, using version from CVMFS
[2025-10-13 20:55:13] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 20:55:13] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot104/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut13.grid.cesnet.cz
[2025-10-13 20:55:13] apptainer works
[2025-10-13 20:55:13] Set ATHENA_PROC_NUMBER=4
[2025-10-13 20:55:13] Set ATHENA_CORE_NUMBER=4
[2025-10-13 20:55:13] Starting ATLAS job with PandaID=6839988511
[2025-10-13 20:55:13] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot104/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-14 00:51:07]  *** The last 200 lines of the pilot log: ***
[2025-10-14 00:51:07] 2025-10-13 21:32:31,353 | INFO     | monitor loop #649: job 0:6839988511 is in state 'finished'
[2025-10-14 00:51:07] 2025-10-13 21:32:31,354 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-14 00:51:07] 2025-10-13 21:32:32,551 | INFO     | time since job start (9425s) is within the limit (172800.0s)
[2025-10-14 00:51:07] 2025-10-13 21:32:33,584 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-14 00:51:07] 2025-10-13 21:32:33,604 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 2671.3148203124993
[2025-10-14 00:51:07] 2025-10-13 21:32:33,628 | INFO     | using path: /scratch/boinc/var/slot104/slots/0/PanDA_Pilot-6839988511/memory_monitor_summary.json (trf name=prmon)
[2025-10-14 00:51:07] 2025-10-13 21:32:33,629 | INFO     | extracted standard info from prmon json
[2025-10-14 00:51:07] 2025-10-13 21:32:33,629 | INFO     | extracted standard memory fields from prmon json
[2025-10-14 00:51:07] 2025-10-13 21:32:33,629 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-14 00:51:07] 2025-10-13 21:32:33,629 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-14 00:51:07] 2025-10-13 21:32:33,629 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-14 00:51:07] 2025-10-13 21:32:33,632 | INFO     | fitting pss+swap vs Time
[2025-10-14 00:51:07] 2025-10-13 21:32:33,633 | INFO     | sum of square deviations: 1132458442.5
[2025-10-14 00:51:07] 2025-10-13 21:32:33,633 | INFO     | sum of deviations: -8127374253.500003
[2025-10-14 00:51:07] 2025-10-13 21:32:33,634 | INFO     | mean x: 1760386426.5
[2025-10-14 00:51:07] 2025-10-13 21:32:33,634 | INFO     | mean y: 2342464.474025974
[2025-10-14 00:51:07] 2025-10-13 21:32:33,634 | INFO     | -- intersect: 12636200610.61697
[2025-10-14 00:51:07] 2025-10-13 21:32:33,634 | INFO     | intersect: 12636200610.61697
[2025-10-14 00:51:07] 2025-10-13 21:32:33,634 | INFO     | chi2: 1.4309707686471924
[2025-10-14 00:51:07] 2025-10-13 21:32:33,634 | INFO     | sum of square deviations: 1025693650.0
[2025-10-14 00:51:07] 2025-10-13 21:32:33,635 | INFO     | sum of deviations: -7829385441.000001
[2025-10-14 00:51:07] 2025-10-13 21:32:33,635 | INFO     | mean x: 1760386274.0
[2025-10-14 00:51:07] 2025-10-13 21:32:33,635 | INFO     | mean y: 2342890.2617449663
[2025-10-14 00:51:07] 2025-10-13 21:32:33,635 | INFO     | -- intersect: 13439827527.308918
[2025-10-14 00:51:07] 2025-10-13 21:32:33,636 | INFO     | intersect: 13439827527.308918
[2025-10-14 00:51:07] 2025-10-13 21:32:33,636 | INFO     | chi2: 1.4289667664875758
[2025-10-14 00:51:07] 2025-10-13 21:32:33,636 | INFO     | current chi2=1.4289667664875758 (change=0.14004494036668136 %)
[2025-10-14 00:51:07] 2025-10-13 21:32:33,636 | INFO     | right removable region: 148
[2025-10-14 00:51:07] 2025-10-13 21:32:33,636 | INFO     | sum of square deviations: 1025693650.0
[2025-10-14 00:51:07] 2025-10-13 21:32:33,637 | INFO     | sum of deviations: -21520418383.999985
[2025-10-14 00:51:07] 2025-10-13 21:32:33,637 | INFO     | mean x: 1760386579.0
[2025-10-14 00:51:07] 2025-10-13 21:32:33,637 | INFO     | mean y: 2361047.355704698
[2025-10-14 00:51:07] 2025-10-13 21:32:33,637 | INFO     | -- intersect: 36937615250.84857
[2025-10-14 00:51:07] 2025-10-13 21:32:33,638 | INFO     | intersect: 36937615250.84857
[2025-10-14 00:51:07] 2025-10-13 21:32:33,638 | INFO     | chi2: 0.21877523852131317
[2025-10-14 00:51:07] 2025-10-13 21:32:33,638 | INFO     | current chi2=0.21877523852131317 (change=84.71141107039256 %)
[2025-10-14 00:51:07] 2025-10-13 21:32:33,638 | INFO     | sum of square deviations: 925859220.0
[2025-10-14 00:51:07] 2025-10-13 21:32:33,639 | INFO     | sum of deviations: -13942328024.500002
[2025-10-14 00:51:07] 2025-10-13 21:32:33,639 | INFO     | mean x: 1760386731.5
[2025-10-14 00:51:07] 2025-10-13 21:32:33,639 | INFO     | mean y: 2349463.1458333335
[2025-10-14 00:51:07] 2025-10-13 21:32:33,639 | INFO     | -- intersect: 26511659658.86912
[2025-10-14 00:51:07] 2025-10-13 21:32:33,639 | INFO     | intersect: 26511659658.86912
[2025-10-14 00:51:07] 2025-10-13 21:32:33,639 | INFO     | chi2: 0.16537919444322713
[2025-10-14 00:51:07] 2025-10-13 21:32:33,640 | INFO     | current chi2=0.16537919444322713 (change=24.406804188164184 %)
[2025-10-14 00:51:07] 2025-10-13 21:32:33,640 | INFO     | left removable region: 20
[2025-10-14 00:51:07] 2025-10-13 21:32:33,640 | INFO     | sum of square deviations: 650252192.0
[2025-10-14 00:51:07] 2025-10-13 21:32:33,641 | INFO     | sum of deviations: -148440633.0
[2025-10-14 00:51:07] 2025-10-13 21:32:33,641 | INFO     | mean x: 1760386853.5
[2025-10-14 00:51:07] 2025-10-13 21:32:33,641 | INFO     | mean y: 2325885.109375
[2025-10-14 00:51:07] 2025-10-13 21:32:33,641 | INFO     | -- intersect: 404189872.7642113
[2025-10-14 00:51:07] 2025-10-13 21:32:33,641 | INFO     | intersect: 404189872.7642113
[2025-10-14 00:51:07] 2025-10-13 21:32:33,641 | INFO     | chi2: 0.007120973735696169
[2025-10-14 00:51:07] 2025-10-13 21:32:33,641 | INFO     | -- intersect: 404189872.7642113
[2025-10-14 00:51:07] 2025-10-13 21:32:33,641 | INFO     | current memory leak: -0.23 B/s (using 128 data points, chi2=0.01)
[2025-10-14 00:51:07] 2025-10-13 21:32:33,642 | INFO     | could have reported an average CPU frequency of 2696 MHz (9 samples)
[2025-10-14 00:51:07] 2025-10-13 21:32:33,642 | INFO     | ..............................
[2025-10-14 00:51:07] 2025-10-13 21:32:33,642 | INFO     | . Timing measurements:
[2025-10-14 00:51:07] 2025-10-13 21:32:33,642 | INFO     | . get job = 0 s
[2025-10-14 00:51:07] 2025-10-13 21:32:33,642 | INFO     | . initial setup = 1 s
[2025-10-14 00:51:07] 2025-10-13 21:32:33,642 | INFO     | . payload setup = 8 s
[2025-10-14 00:51:07] 2025-10-13 21:32:33,642 | INFO     | . stage-in = 0 s
[2025-10-14 00:51:07] 2025-10-13 21:32:33,642 | INFO     | . payload execution = 9383 s
[2025-10-14 00:51:07] 2025-10-13 21:32:33,642 | INFO     | . stage-out = 1 s
[2025-10-14 00:51:07] 2025-10-13 21:32:33,643 | INFO     | . log creation = 0 s
[2025-10-14 00:51:07] 2025-10-13 21:32:33,643 | INFO     | ..............................
[2025-10-14 00:51:07] 2025-10-13 21:32:33,737 | INFO     | 
[2025-10-14 00:51:07] 2025-10-13 21:32:33,737 | INFO     | job summary report
[2025-10-14 00:51:07] 2025-10-13 21:32:33,737 | INFO     | --------------------------------------------------
[2025-10-14 00:51:07] 2025-10-13 21:32:33,737 | INFO     | PanDA job id: 6839988511
[2025-10-14 00:51:07] 2025-10-13 21:32:33,737 | INFO     | task id: 46676269
[2025-10-14 00:51:07] 2025-10-13 21:32:33,737 | INFO     | errors: (none)
[2025-10-14 00:51:07] 2025-10-13 21:32:33,738 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-14 00:51:07] 2025-10-13 21:32:33,738 | INFO     | pilot state: finished 
[2025-10-14 00:51:07] 2025-10-13 21:32:33,738 | INFO     | transexitcode: 0
[2025-10-14 00:51:07] 2025-10-13 21:32:33,738 | INFO     | exeerrorcode: 0
[2025-10-14 00:51:07] 2025-10-13 21:32:33,738 | INFO     | exeerrordiag: 
[2025-10-14 00:51:07] 2025-10-13 21:32:33,738 | INFO     | exitcode: 0
[2025-10-14 00:51:07] 2025-10-13 21:32:33,738 | INFO     | exitmsg: OK
[2025-10-14 00:51:07] 2025-10-13 21:32:33,738 | INFO     | cpuconsumptiontime: 35847 s
[2025-10-14 00:51:07] 2025-10-13 21:32:33,738 | INFO     | nevents: 400
[2025-10-14 00:51:07] 2025-10-13 21:32:33,738 | INFO     | neventsw: 0
[2025-10-14 00:51:07] 2025-10-13 21:32:33,738 | INFO     | pid: 1489180
[2025-10-14 00:51:07] 2025-10-13 21:32:33,739 | INFO     | pgrp: 1489180
[2025-10-14 00:51:07] 2025-10-13 21:32:33,739 | INFO     | corecount: 4
[2025-10-14 00:51:07] 2025-10-13 21:32:33,739 | INFO     | event service: False
[2025-10-14 00:51:07] 2025-10-13 21:32:33,739 | INFO     | sizes: {0: 2348869, 7: 2349131, 11: 2349159, 9395: 2377855, 9398: 2386877, 9401: 2386933, 9409: 2387319}
[2025-10-14 00:51:07] 2025-10-13 21:32:33,739 | INFO     | --------------------------------------------------
[2025-10-14 00:51:07] 2025-10-13 21:32:33,739 | INFO     | 
[2025-10-14 00:51:07] 2025-10-13 21:32:33,739 | INFO     | executing command: ls -lF /scratch/boinc/var/slot104/slots/0
[2025-10-14 00:51:07] 2025-10-13 21:32:33,769 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-14 00:51:07] 2025-10-13 21:32:33,770 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-14 00:51:07] 2025-10-13 21:32:33,770 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-14 00:51:07] 2025-10-13 21:32:33,770 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-14 00:51:07] 2025-10-13 21:32:33,770 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-14 00:51:07] 2025-10-13 21:32:33,770 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-14 00:51:07] 2025-10-13 21:32:33,770 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-14 00:51:07] 2025-10-13 21:32:33,771 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-14 00:51:07] 2025-10-13 21:32:33,771 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-14 00:51:07] 2025-10-13 21:32:33,771 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-14 00:51:07] 2025-10-13 21:32:33,771 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-14 00:51:07] 2025-10-13 21:32:33,771 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-14 00:51:07] 2025-10-13 21:32:33,771 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-14 00:51:07] 2025-10-13 21:32:33,771 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-14 00:51:07] 2025-10-13 21:32:33,771 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-14 00:51:07] 2025-10-13 21:32:33,771 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-14 00:51:07] 2025-10-13 21:32:33,771 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-14 00:51:07] 2025-10-13 21:32:33,772 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-14 00:51:07] 2025-10-13 21:32:33,772 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-14 00:51:07] 2025-10-13 21:32:33,772 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-14 00:51:07] 2025-10-13 21:32:33,772 | INFO     | job 6839988511 has completed (purged errors)
[2025-10-14 00:51:07] 2025-10-13 21:32:33,772 | INFO     | overall cleanup function is called
[2025-10-14 00:51:07] 2025-10-13 21:32:34,781 | INFO     | --- collectZombieJob: --- 10, [1489180]
[2025-10-14 00:51:07] 2025-10-13 21:32:34,781 | INFO     | zombie collector waiting for pid 1489180
[2025-10-14 00:51:07] 2025-10-13 21:32:34,781 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-14 00:51:07] 2025-10-13 21:32:34,781 | INFO     | collected zombie processes
[2025-10-14 00:51:07] 2025-10-13 21:32:34,781 | INFO     | will attempt to kill all subprocesses of pid=1489180
[2025-10-14 00:51:07] 2025-10-13 21:32:35,480 | INFO     | process IDs to be killed: [1489180] (in reverse order)
[2025-10-14 00:51:07] 2025-10-13 21:32:35,761 | WARNING  | found no corresponding commands to process id(s)
[2025-10-14 00:51:07] 2025-10-13 21:32:35,761 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-14 00:51:07] 2025-10-13 21:32:35,794 | INFO     | did not find any defunct processes belonging to 1489180
[2025-10-14 00:51:07] 2025-10-13 21:32:35,825 | INFO     | did not find any defunct processes belonging to 1489180
[2025-10-14 00:51:07] 2025-10-13 21:32:35,825 | INFO     | ready for new job
[2025-10-14 00:51:07] 2025-10-13 21:32:35,825 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-14 00:51:07] 2025-10-13 21:32:35,827 | INFO     | ***************************************
[2025-10-14 00:51:07] 2025-10-13 21:32:35,827 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-14 00:51:07] 2025-10-13 21:32:35,827 | INFO     | ***************************************
[2025-10-14 00:51:07] 2025-10-13 21:32:35,827 | INFO     | 
[2025-10-14 00:51:07] 2025-10-13 21:32:35,836 | INFO     | architecture information:
[2025-10-14 00:51:07] 2025-10-13 21:32:35,836 | INFO     | executing command: cat /etc/os-release
[2025-10-14 00:51:07] 2025-10-13 21:32:35,858 | INFO     | cat /etc/os-release:
[2025-10-14 00:51:07] NAME="CentOS Linux"
[2025-10-14 00:51:07] VERSION="7 (Core)"
[2025-10-14 00:51:07] ID="centos"
[2025-10-14 00:51:07] ID_LIKE="rhel fedora"
[2025-10-14 00:51:07] VERSION_ID="7"
[2025-10-14 00:51:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-14 00:51:07] ANSI_COLOR="0;31"
[2025-10-14 00:51:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-14 00:51:07] HOME_URL="https://www.centos.org/"
[2025-10-14 00:51:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-14 00:51:07] 
[2025-10-14 00:51:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-14 00:51:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-14 00:51:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-14 00:51:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-14 00:51:07] 
[2025-10-14 00:51:07] 2025-10-13 21:32:35,858 | INFO     | ***************************************
[2025-10-14 00:51:07] 2025-10-13 21:32:36,361 | INFO     | executing command: df -mP /scratch/boinc/var/slot104/slots/0
[2025-10-14 00:51:07] 2025-10-13 21:32:36,388 | INFO     | sufficient remaining disk space (3345537302528 B)
[2025-10-14 00:51:07] 2025-10-13 21:32:36,388 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-14 00:51:07] 2025-10-13 21:32:36,389 | INFO     | current server update state: UPDATING_FINAL
[2025-10-14 00:51:07] 2025-10-13 21:32:36,389 | INFO     | update_server=False
[2025-10-14 00:51:07] 2025-10-13 21:32:36,389 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-14 00:51:07] 2025-10-13 21:32:36,389 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-14 00:51:07] 2025-10-13 21:32:36,502 | INFO     | all payload control threads have been joined
[2025-10-14 00:51:07] 2025-10-13 21:32:36,566 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-14 00:51:07] 2025-10-13 21:32:37,005 | INFO     | all data control threads have been joined
[2025-10-14 00:51:07] 2025-10-13 21:32:37,369 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-14 00:51:07] 2025-10-13 21:32:37,370 | INFO     | aborting loop
[2025-10-14 00:51:07] 2025-10-13 21:32:37,393 | INFO     | [job] retrieve thread has finished
[2025-10-14 00:51:07] 2025-10-13 21:32:37,507 | INFO     | [payload] control thread has finished
[2025-10-14 00:51:07] 2025-10-13 21:32:37,535 | INFO     | [data] copytool_in thread has finished
[2025-10-14 00:51:07] 2025-10-13 21:32:37,548 | INFO     | all job control threads have been joined
[2025-10-14 00:51:07] 2025-10-13 21:32:37,721 | INFO     | [payload] failed_post thread has finished
[2025-10-14 00:51:07] 2025-10-13 21:32:37,810 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-14 00:51:07] 2025-10-13 21:32:37,935 | INFO     | [job] validate thread has finished
[2025-10-14 00:51:07] 2025-10-13 21:32:38,010 | INFO     | [data] control thread has finished
[2025-10-14 00:51:07] 2025-10-13 21:32:38,237 | INFO     | [job] create_data_payload thread has finished
[2025-10-14 00:51:07] 2025-10-13 21:32:38,375 | INFO     | [job] job monitor thread has finished
[2025-10-14 00:51:07] 2025-10-13 21:32:38,395 | INFO     | [data] copytool_out thread has finished
[2025-10-14 00:51:07] 2025-10-13 21:32:38,554 | INFO     | [job] control thread has finished
[2025-10-14 00:51:07] 2025-10-13 21:32:38,557 | INFO     | [payload] validate_pre thread has finished
[2025-10-14 00:51:07] 2025-10-13 21:32:38,701 | INFO     | [payload] execute_payloads thread has finished
[2025-10-14 00:51:07] 2025-10-13 21:32:38,722 | INFO     | [payload] validate_post thread has finished
[2025-10-14 00:51:07] 2025-10-13 21:32:38,747 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-14 00:51:07] 2025-10-13 21:32:39,752 | INFO     | [job] queue monitor thread has finished
[2025-10-14 00:51:07] 2025-10-13 21:32:40,572 | INFO     | [data] queue_monitor thread has finished
[2025-10-14 00:51:07] 2025-10-13 21:32:42,038 | INFO     | [monitor] cgroup control has ended
[2025-10-14 00:51:07] 2025-10-13 21:32:43,808 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23219615303488)>', '<ExcThread(monitor, started 23219379599104)>']
[2025-10-14 00:51:07] 2025-10-13 21:32:48,833 | INFO     | all workflow threads have been joined
[2025-10-14 00:51:07] 2025-10-13 21:32:48,833 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-14 00:51:07] 2025-10-13 21:32:48,833 | INFO     | traces error code: 0
[2025-10-14 00:51:07] 2025-10-13 21:32:48,833 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-14 00:51:07] 2025-10-13 21:33:06,617 | INFO     | PID=1481852 has CPU usage=5.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-14 00:51:07] 2025-10-13 21:33:06,617 | INFO     | .. there are 14 such processes running
[2025-10-14 00:51:07] 2025-10-13 21:33:06,622 | INFO     | found 0 job(s) in 20 queues
[2025-10-14 00:51:07] 2025-10-13 21:33:06,622 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-14 00:51:07] 2025-10-13 21:33:06,622 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-14 00:51:07] 2025-10-13 21:33:06,622 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-14 00:51:07] 2025-10-13 21:33:06,622 | INFO     | [monitor] control thread has ended
[2025-10-14 00:51:07] 2025-10-13 21:33:06,780 [wrapper] ==== pilot stdout END ====
[2025-10-14 00:51:07] 2025-10-13 21:33:06,784 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-14 00:51:07] 2025-10-13 21:33:06,787 [wrapper] pilotpid: 1481852
[2025-10-14 00:51:07] 2025-10-13 21:33:06,791 [wrapper] Pilot exit status: 0
[2025-10-14 00:51:07] 2025-10-13 21:33:06,805 [wrapper] pandaids: 6839988511 6839988511
[2025-10-14 00:51:07] 2025-10-13 21:33:06,982 [wrapper] cleanup supervisor_pilot 2100456 1481853
[2025-10-14 00:51:07] 2025-10-13 21:33:06,986 [wrapper] Test setup, not cleaning
[2025-10-14 00:51:07] 2025-10-13 21:33:06,990 [wrapper] apfmon messages muted
[2025-10-14 00:51:07] 2025-10-13 21:33:06,993 [wrapper] ==== wrapper stdout END ====
[2025-10-14 00:51:07] 2025-10-13 21:33:06,996 [wrapper] ==== wrapper stderr END ====
[2025-10-14 00:51:07]  *** Error codes and diagnostics ***
[2025-10-14 00:51:07]     "exeErrorCode": 0,
[2025-10-14 00:51:07]     "exeErrorDiag": "",
[2025-10-14 00:51:07]     "pilotErrorCode": 0,
[2025-10-14 00:51:07]     "pilotErrorDiag": "",
[2025-10-14 00:51:07]  *** Listing of results directory ***
[2025-10-14 00:51:07] total 622580
[2025-10-14 00:51:07] drwx------ 5 boinc boinc      4096 Oct  7 09:00 pilot3
[2025-10-14 00:51:07] -rw-r--r-- 1 boinc boinc    557409 Oct 12 14:35 pilot3.tar.gz
[2025-10-14 00:51:07] -rw-r--r-- 1 boinc boinc      5112 Oct 12 14:46 queuedata.json
[2025-10-14 00:51:07] -rwx------ 1 boinc boinc     36292 Oct 12 14:46 runpilot2-wrapper.sh
[2025-10-14 00:51:07] -rw-r--r-- 1 boinc boinc       100 Oct 13 19:16 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-14 00:51:07] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 19:16 run_atlas
[2025-10-14 00:51:07] -rw-r--r-- 1 boinc boinc       105 Oct 13 19:16 job.xml
[2025-10-14 00:51:07] -rw-r--r-- 3 boinc boinc 219360773 Oct 13 19:16 EVNT.46676267._003813.pool.root.1
[2025-10-14 00:51:07] -rw-r--r-- 3 boinc boinc 219360773 Oct 13 19:16 ATLAS.root_0
[2025-10-14 00:51:07] -rw-r--r-- 2 boinc boinc     15120 Oct 13 19:16 start_atlas.sh
[2025-10-14 00:51:07] drwxrwx--x 2 boinc boinc      4096 Oct 13 19:16 shared
[2025-10-14 00:51:07] -rw-r--r-- 2 boinc boinc    569682 Oct 13 19:16 input.tar.gz
[2025-10-14 00:51:07] -rw-r--r-- 1 boinc boinc         0 Oct 13 19:16 boinc_lockfile
[2025-10-14 00:51:07] -rw-r--r-- 1 boinc boinc      6694 Oct 13 20:55 init_data.xml
[2025-10-14 00:51:07] -rw-r--r-- 1 boinc boinc      2550 Oct 13 20:55 pandaJob.out
[2025-10-14 00:51:07] -rw------- 1 boinc boinc    972799 Oct 13 20:55 agis_schedconf.cvmfs.json
[2025-10-14 00:51:07] -rw------- 1 boinc boinc 191553760 Oct 13 23:31 HITS.46676269._078604.pool.root.1
[2025-10-14 00:51:07] -rw-r--r-- 1 boinc boinc       528 Oct 13 23:31 boinc_task_state.xml
[2025-10-14 00:51:07] -rw------- 1 boinc boinc      1025 Oct 13 23:32 memory_monitor_summary.json
[2025-10-14 00:51:07] -rw------- 1 boinc boinc   1560580 Oct 13 23:32 agis_ddmendpoints.agis.ALL.json
[2025-10-14 00:51:07] -rw------- 1 boinc boinc    347798 Oct 13 23:32 log.46676269._078604.job.log.tgz.1
[2025-10-14 00:51:07] -rw------- 1 boinc boinc      7776 Oct 13 23:32 heartbeat.json
[2025-10-14 00:51:07] -rw------- 1 boinc boinc        97 Oct 13 23:33 pilot_heartbeat.json
[2025-10-14 00:51:07] -rw------- 1 boinc boinc       823 Oct 13 23:33 pilotlog.txt
[2025-10-14 00:51:07] -rw------- 1 boinc boinc   1325221 Oct 13 23:33 log.46676269._078604.job.log.1
[2025-10-14 00:51:07] -rw------- 1 boinc boinc       357 Oct 13 23:33 output.list
[2025-10-14 00:51:07] -rw-r--r-- 1 boinc boinc       620 Oct 13 23:33 runtime_log
[2025-10-14 00:51:07] -rw------- 1 boinc boinc   1689600 Oct 13 23:33 result.tar.gz
[2025-10-14 00:51:07] -rw-r--r-- 1 boinc boinc      9161 Oct 13 23:33 runtime_log.err
[2025-10-14 00:51:07] -rw------- 1 boinc boinc       788 Oct 13 23:33 EWTLDmLeAS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmkrjNDmcOUoxm.diag
[2025-10-14 00:51:07] -rw-r--r-- 1 boinc boinc        27 Oct 14 00:50 wrapper_checkpoint.txt
[2025-10-14 00:51:07] -rw-r--r-- 1 boinc boinc      8192 Oct 14 00:51 boinc_mmap_file
[2025-10-14 00:51:07] -rw-r--r-- 1 boinc boinc     22832 Oct 14 00:51 stderr.txt
[2025-10-14 00:51:07] HITS file was successfully produced:
[2025-10-14 00:51:07] -rw------- 1 boinc boinc 191553760 Oct 13 23:31 shared/HITS.pool.root.1
[2025-10-14 00:51:07]  *** Contents of shared directory: ***
[2025-10-14 00:51:07] total 403524
[2025-10-14 00:51:07] -rw-r--r-- 3 boinc boinc 219360773 Oct 13 19:16 ATLAS.root_0
[2025-10-14 00:51:07] -rw-r--r-- 2 boinc boinc     15120 Oct 13 19:16 start_atlas.sh
[2025-10-14 00:51:07] -rw-r--r-- 2 boinc boinc    569682 Oct 13 19:16 input.tar.gz
[2025-10-14 00:51:07] -rw------- 1 boinc boinc 191553760 Oct 13 23:31 HITS.pool.root.1
[2025-10-14 00:51:07] -rw------- 1 boinc boinc   1689600 Oct 13 23:33 result.tar.gz
00:51:08 (1477814): run_atlas exited; CPU time 36411.818740
00:51:08 (1477814): called boinc_finish(0)

</stderr_txt>
]]>

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