Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:35:53 (3885): wrapper (7.7.26015): starting
00:35:53 (3885): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 00:35:53] Arguments: --nthreads 8
[2025-10-13 00:35:53] Threads: 8
[2025-10-13 00:35:53] Checking for CVMFS
[2025-10-13 00:35:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 00:35:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 00:35:55] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 00:35:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 00:35:56] 2.11.2.0 672 22222 82544 151640 1 60 21663297 25165825 4632 130560 0 5318365 99.918 2234376 1359 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-10-13 00:35:56] CVMFS is ok
[2025-10-13 00:35:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 00:35:56] Checking for apptainer binary...
[2025-10-13 00:35:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 00:35:56] Running /usr/bin/apptainer --version
[2025-10-13 00:35:56] apptainer version 1.3.2-1.el7
[2025-10-13 00:35:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 00:36:05] cg-vwn400.simple-grid.lan
[2025-10-13 00:36:05] apptainer works
[2025-10-13 00:36:05] Set ATHENA_PROC_NUMBER=8
[2025-10-13 00:36:05] Set ATHENA_CORE_NUMBER=8
[2025-10-13 00:36:05] Starting ATLAS job with PandaID=6839988421
[2025-10-13 00:36:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/19 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 04:40:07]  *** The last 200 lines of the pilot log: ***
[2025-10-13 04:40:07] 2025-10-13 02:39:24,412 | INFO     | fitting pss+swap vs Time
[2025-10-13 04:40:07] 2025-10-13 02:39:24,412 | INFO     | sum of square deviations: 3627000098.0
[2025-10-13 04:40:07] 2025-10-13 02:39:24,414 | INFO     | sum of deviations: 86208600628.00002
[2025-10-13 04:40:07] 2025-10-13 02:39:24,414 | INFO     | mean x: 1760316151.0
[2025-10-13 04:40:07] 2025-10-13 02:39:24,414 | INFO     | mean y: 2429587.317180617
[2025-10-13 04:40:07] 2025-10-13 02:39:24,414 | INFO     | -- intersect: -41837765598.85267
[2025-10-13 04:40:07] 2025-10-13 02:39:24,414 | INFO     | intersect: -41837765598.85267
[2025-10-13 04:40:07] 2025-10-13 02:39:24,415 | INFO     | chi2: 6.690301102288606
[2025-10-13 04:40:07] 2025-10-13 02:39:24,415 | INFO     | sum of square deviations: 3392567795.5
[2025-10-13 04:40:07] 2025-10-13 02:39:24,417 | INFO     | sum of deviations: 99081294537.0
[2025-10-13 04:40:07] 2025-10-13 02:39:24,417 | INFO     | mean x: 1760315998.5
[2025-10-13 04:40:07] 2025-10-13 02:39:24,417 | INFO     | mean y: 2437787.243243243
[2025-10-13 04:40:07] 2025-10-13 02:39:24,417 | INFO     | -- intersect: -51408292502.92812
[2025-10-13 04:40:07] 2025-10-13 02:39:24,417 | INFO     | intersect: -51408292502.92812
[2025-10-13 04:40:07] 2025-10-13 02:39:24,418 | INFO     | chi2: 5.978858676146667
[2025-10-13 04:40:07] 2025-10-13 02:39:24,418 | INFO     | current chi2=5.978858676146667 (change=10.63393732605801 %)
[2025-10-13 04:40:07] 2025-10-13 02:39:24,418 | INFO     | right removable region: 221
[2025-10-13 04:40:07] 2025-10-13 02:39:24,418 | INFO     | sum of square deviations: 3392567795.5
[2025-10-13 04:40:07] 2025-10-13 02:39:24,420 | INFO     | sum of deviations: 10058294514.0
[2025-10-13 04:40:07] 2025-10-13 02:39:24,420 | INFO     | mean x: 1760316303.5
[2025-10-13 04:40:07] 2025-10-13 02:39:24,420 | INFO     | mean y: 2479077.207207207
[2025-10-13 04:40:07] 2025-10-13 02:39:24,421 | INFO     | -- intersect: -5216511635.928803
[2025-10-13 04:40:07] 2025-10-13 02:39:24,421 | INFO     | intersect: -5216511635.928803
[2025-10-13 04:40:07] 2025-10-13 02:39:24,421 | INFO     | chi2: 2.1292527307786235
[2025-10-13 04:40:07] 2025-10-13 02:39:24,421 | INFO     | current chi2=2.1292527307786235 (change=68.17403733816624 %)
[2025-10-13 04:40:07] 2025-10-13 02:39:24,422 | INFO     | sum of square deviations: 3168461268.0
[2025-10-13 04:40:07] 2025-10-13 02:39:24,423 | INFO     | sum of deviations: -25715981121.0
[2025-10-13 04:40:07] 2025-10-13 02:39:24,423 | INFO     | mean x: 1760316456.0
[2025-10-13 04:40:07] 2025-10-13 02:39:24,423 | INFO     | mean y: 2503247.824884793
[2025-10-13 04:40:07] 2025-10-13 02:39:24,424 | INFO     | -- intersect: 14289647991.13302
[2025-10-13 04:40:07] 2025-10-13 02:39:24,424 | INFO     | intersect: 14289647991.13302
[2025-10-13 04:40:07] 2025-10-13 02:39:24,424 | INFO     | chi2: 0.8888099415851674
[2025-10-13 04:40:07] 2025-10-13 02:39:24,424 | INFO     | current chi2=0.8888099415851674 (change=58.257189072142324 %)
[2025-10-13 04:40:07] 2025-10-13 02:39:24,425 | INFO     | sum of square deviations: 2954447953.0
[2025-10-13 04:40:07] 2025-10-13 02:39:24,426 | INFO     | sum of deviations: -26692767472.0
[2025-10-13 04:40:07] 2025-10-13 02:39:24,426 | INFO     | mean x: 1760316608.5
[2025-10-13 04:40:07] 2025-10-13 02:39:24,426 | INFO     | mean y: 2503920.1981132077
[2025-10-13 04:40:07] 2025-10-13 02:39:24,426 | INFO     | -- intersect: 15906565408.25986
[2025-10-13 04:40:07] 2025-10-13 02:39:24,426 | INFO     | intersect: 15906565408.25986
[2025-10-13 04:40:07] 2025-10-13 02:39:24,427 | INFO     | chi2: 0.8765690361631238
[2025-10-13 04:40:07] 2025-10-13 02:39:24,427 | INFO     | current chi2=0.8765690361631238 (change=1.3772241791324118 %)
[2025-10-13 04:40:07] 2025-10-13 02:39:24,427 | INFO     | left removable region: 30
[2025-10-13 04:40:07] 2025-10-13 02:39:24,427 | INFO     | sum of square deviations: 2160561440.0
[2025-10-13 04:40:07] 2025-10-13 02:39:24,429 | INFO     | sum of deviations: 3169159290.9999986
[2025-10-13 04:40:07] 2025-10-13 02:39:24,429 | INFO     | mean x: 1760316883.0
[2025-10-13 04:40:07] 2025-10-13 02:39:24,429 | INFO     | mean y: 2501993.5916230367
[2025-10-13 04:40:07] 2025-10-13 02:39:24,429 | INFO     | -- intersect: -2579569731.646428
[2025-10-13 04:40:07] 2025-10-13 02:39:24,429 | INFO     | intersect: -2579569731.646428
[2025-10-13 04:40:07] 2025-10-13 02:39:24,429 | INFO     | chi2: 0.00039154513388012517
[2025-10-13 04:40:07] 2025-10-13 02:39:24,430 | INFO     | -- intersect: -2579569731.646428
[2025-10-13 04:40:07] 2025-10-13 02:39:24,430 | INFO     | current memory leak: 1.47 B/s (using 191 data points, chi2=0.00)
[2025-10-13 04:40:07] 2025-10-13 02:39:24,430 | INFO     | could have reported an average CPU frequency of 1999 MHz (11 samples)
[2025-10-13 04:40:07] 2025-10-13 02:39:24,431 | INFO     | ..............................
[2025-10-13 04:40:07] 2025-10-13 02:39:24,431 | INFO     | . Timing measurements:
[2025-10-13 04:40:07] 2025-10-13 02:39:24,431 | INFO     | . get job = 0 s
[2025-10-13 04:40:07] 2025-10-13 02:39:24,431 | INFO     | . initial setup = 9 s
[2025-10-13 04:40:07] 2025-10-13 02:39:24,431 | INFO     | . payload setup = 139 s
[2025-10-13 04:40:07] 2025-10-13 02:39:24,431 | INFO     | . stage-in = 0 s
[2025-10-13 04:40:07] 2025-10-13 02:39:24,431 | INFO     | . payload execution = 13950 s
[2025-10-13 04:40:07] 2025-10-13 02:39:24,431 | INFO     | . stage-out = 3 s
[2025-10-13 04:40:07] 2025-10-13 02:39:24,431 | INFO     | . log creation = 1 s
[2025-10-13 04:40:07] 2025-10-13 02:39:24,431 | INFO     | ..............................
[2025-10-13 04:40:07] 2025-10-13 02:39:24,483 | INFO     | time since job start (14389s) is within the limit (172800.0s)
[2025-10-13 04:40:07] 2025-10-13 02:39:24,552 | INFO     | 
[2025-10-13 04:40:07] 2025-10-13 02:39:24,552 | INFO     | job summary report
[2025-10-13 04:40:07] 2025-10-13 02:39:24,553 | INFO     | --------------------------------------------------
[2025-10-13 04:40:07] 2025-10-13 02:39:24,553 | INFO     | PanDA job id: 6839988421
[2025-10-13 04:40:07] 2025-10-13 02:39:24,553 | INFO     | task id: 46676269
[2025-10-13 04:40:07] 2025-10-13 02:39:24,553 | INFO     | errors: (none)
[2025-10-13 04:40:07] 2025-10-13 02:39:24,553 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 04:40:07] 2025-10-13 02:39:24,553 | INFO     | pilot state: finished 
[2025-10-13 04:40:07] 2025-10-13 02:39:24,553 | INFO     | transexitcode: 0
[2025-10-13 04:40:07] 2025-10-13 02:39:24,553 | INFO     | exeerrorcode: 0
[2025-10-13 04:40:07] 2025-10-13 02:39:24,554 | INFO     | exeerrordiag: 
[2025-10-13 04:40:07] 2025-10-13 02:39:24,554 | INFO     | exitcode: 0
[2025-10-13 04:40:07] 2025-10-13 02:39:24,554 | INFO     | exitmsg: OK
[2025-10-13 04:40:07] 2025-10-13 02:39:24,554 | INFO     | cpuconsumptiontime: 51664 s
[2025-10-13 04:40:07] 2025-10-13 02:39:24,554 | INFO     | nevents: 400
[2025-10-13 04:40:07] 2025-10-13 02:39:24,554 | INFO     | neventsw: 0
[2025-10-13 04:40:07] 2025-10-13 02:39:24,554 | INFO     | pid: 14226
[2025-10-13 04:40:07] 2025-10-13 02:39:24,554 | INFO     | pgrp: 14226
[2025-10-13 04:40:07] 2025-10-13 02:39:24,555 | INFO     | corecount: 8
[2025-10-13 04:40:07] 2025-10-13 02:39:24,555 | INFO     | event service: False
[2025-10-13 04:40:07] 2025-10-13 02:39:24,555 | INFO     | sizes: {0: 2348687, 1: 2348886, 12: 2348886, 23: 2348914, 33: 2348942, 44: 2348998, 55: 2349154, 66: 2349182, 76: 2349210, 87: 2349266, 88: 2349556, 98: 2349864, 1
[2025-10-13 04:40:07] 2025-10-13 02:39:24,555 | INFO     | --------------------------------------------------
[2025-10-13 04:40:07] 2025-10-13 02:39:24,555 | INFO     | 
[2025-10-13 04:40:07] 2025-10-13 02:39:24,555 | INFO     | executing command: ls -lF /var/lib/boinc/slots/19
[2025-10-13 04:40:07] 2025-10-13 02:39:25,013 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 04:40:07] 2025-10-13 02:39:25,013 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 04:40:07] 2025-10-13 02:39:25,014 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 04:40:07] 2025-10-13 02:39:25,014 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 04:40:07] 2025-10-13 02:39:25,014 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 04:40:07] 2025-10-13 02:39:25,014 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 04:40:07] 2025-10-13 02:39:25,014 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 04:40:07] 2025-10-13 02:39:25,014 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 04:40:07] 2025-10-13 02:39:25,014 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 04:40:07] 2025-10-13 02:39:25,014 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 04:40:07] 2025-10-13 02:39:25,014 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 04:40:07] 2025-10-13 02:39:25,014 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 04:40:07] 2025-10-13 02:39:25,015 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 04:40:07] 2025-10-13 02:39:25,015 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 04:40:07] 2025-10-13 02:39:25,015 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 04:40:07] 2025-10-13 02:39:25,015 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 04:40:07] 2025-10-13 02:39:25,015 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 04:40:07] 2025-10-13 02:39:25,015 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 04:40:07] 2025-10-13 02:39:25,015 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 04:40:07] 2025-10-13 02:39:25,015 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 04:40:07] 2025-10-13 02:39:25,015 | INFO     | job 6839988421 has completed (purged errors)
[2025-10-13 04:40:07] 2025-10-13 02:39:25,016 | INFO     | overall cleanup function is called
[2025-10-13 04:40:07] 2025-10-13 02:39:26,025 | INFO     | --- collectZombieJob: --- 10, [14226]
[2025-10-13 04:40:07] 2025-10-13 02:39:26,025 | INFO     | zombie collector waiting for pid 14226
[2025-10-13 04:40:07] 2025-10-13 02:39:26,025 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 04:40:07] 2025-10-13 02:39:26,025 | INFO     | collected zombie processes
[2025-10-13 04:40:07] 2025-10-13 02:39:26,025 | INFO     | will attempt to kill all subprocesses of pid=14226
[2025-10-13 04:40:07] 2025-10-13 02:39:26,119 | INFO     | process IDs to be killed: [14226] (in reverse order)
[2025-10-13 04:40:07] 2025-10-13 02:39:27,191 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 04:40:07] 2025-10-13 02:39:27,191 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 04:40:07] 2025-10-13 02:39:27,194 | INFO     | did not find any defunct processes belonging to 14226
[2025-10-13 04:40:07] 2025-10-13 02:39:27,197 | INFO     | did not find any defunct processes belonging to 14226
[2025-10-13 04:40:07] 2025-10-13 02:39:27,197 | INFO     | ready for new job
[2025-10-13 04:40:07] 2025-10-13 02:39:27,197 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 04:40:07] 2025-10-13 02:39:27,199 | INFO     | ***************************************
[2025-10-13 04:40:07] 2025-10-13 02:39:27,200 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 04:40:07] 2025-10-13 02:39:27,200 | INFO     | ***************************************
[2025-10-13 04:40:07] 2025-10-13 02:39:27,200 | INFO     | 
[2025-10-13 04:40:07] 2025-10-13 02:39:27,200 | INFO     | pilot is running in a VM
[2025-10-13 04:40:07] 2025-10-13 02:39:27,201 | INFO     | architecture information:
[2025-10-13 04:40:07] 2025-10-13 02:39:27,201 | INFO     | executing command: cat /etc/os-release
[2025-10-13 04:40:07] 2025-10-13 02:39:27,348 | INFO     | cat /etc/os-release:
[2025-10-13 04:40:07] NAME="CentOS Linux"
[2025-10-13 04:40:07] VERSION="7 (Core)"
[2025-10-13 04:40:07] ID="centos"
[2025-10-13 04:40:07] ID_LIKE="rhel fedora"
[2025-10-13 04:40:07] VERSION_ID="7"
[2025-10-13 04:40:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 04:40:07] ANSI_COLOR="0;31"
[2025-10-13 04:40:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 04:40:07] HOME_URL="https://www.centos.org/"
[2025-10-13 04:40:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 04:40:07] 
[2025-10-13 04:40:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 04:40:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 04:40:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 04:40:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 04:40:07] 
[2025-10-13 04:40:07] 2025-10-13 02:39:27,349 | INFO     | ***************************************
[2025-10-13 04:40:07] 2025-10-13 02:39:27,658 [wrapper] supervise_pilot (15 min periods counter: 17)
[2025-10-13 04:40:07] 2025-10-13 02:39:27,852 | INFO     | executing command: df -mP /var/lib/boinc/slots/19
[2025-10-13 04:40:07] 2025-10-13 02:39:28,160 | INFO     | sufficient remaining disk space (495198404608 B)
[2025-10-13 04:40:07] 2025-10-13 02:39:28,161 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 04:40:07] 2025-10-13 02:39:28,161 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 04:40:07] 2025-10-13 02:39:28,161 | INFO     | update_server=False
[2025-10-13 04:40:07] 2025-10-13 02:39:28,161 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 04:40:07] 2025-10-13 02:39:28,162 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 04:40:07] 2025-10-13 02:39:28,368 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 04:40:07] 2025-10-13 02:39:28,368 | INFO     | aborting loop
[2025-10-13 04:40:07] 2025-10-13 02:39:28,802 | INFO     | all job control threads have been joined
[2025-10-13 04:40:07] 2025-10-13 02:39:29,122 | INFO     | all data control threads have been joined
[2025-10-13 04:40:07] 2025-10-13 02:39:29,166 | INFO     | [job] retrieve thread has finished
[2025-10-13 04:40:07] 2025-10-13 02:39:29,374 | INFO     | [job] job monitor thread has finished
[2025-10-13 04:40:07] 2025-10-13 02:39:29,401 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 04:40:07] 2025-10-13 02:39:29,515 | INFO     | all payload control threads have been joined
[2025-10-13 04:40:07] 2025-10-13 02:39:29,552 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 04:40:07] 2025-10-13 02:39:29,567 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 04:40:07] 2025-10-13 02:39:29,580 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 04:40:07] 2025-10-13 02:39:29,660 | INFO     | [data] copytool_in thread has finished
[2025-10-13 04:40:07] 2025-10-13 02:39:29,664 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 04:40:07] 2025-10-13 02:39:29,808 | INFO     | [job] control thread has finished
[2025-10-13 04:40:07] 2025-10-13 02:39:30,003 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 04:40:07] 2025-10-13 02:39:30,128 | INFO     | [data] control thread has finished
[2025-10-13 04:40:07] 2025-10-13 02:39:30,170 | INFO     | [data] copytool_out thread has finished
[2025-10-13 04:40:07] 2025-10-13 02:39:30,482 | INFO     | [payload] failed_post thread has finished
[2025-10-13 04:40:07] 2025-10-13 02:39:30,487 | INFO     | [job] validate thread has finished
[2025-10-13 04:40:07] 2025-10-13 02:39:30,521 | INFO     | [payload] control thread has finished
[2025-10-13 04:40:07] 2025-10-13 02:39:30,560 | INFO     | [payload] validate_post thread has finished
[2025-10-13 04:40:07] 2025-10-13 02:39:30,573 | INFO     | [job] queue monitor thread has finished
[2025-10-13 04:40:07] 2025-10-13 02:39:34,012 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 04:40:07] 2025-10-13 02:39:57,722 | INFO     | PID=7659 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-13 04:40:07] 2025-10-13 02:39:57,722 | INFO     | .. there are 9 such processes running
[2025-10-13 04:40:07] 2025-10-13 02:39:57,722 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 04:40:07] 2025-10-13 02:39:57,723 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 04:40:07] 2025-10-13 02:39:57,723 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 04:40:07] 2025-10-13 02:39:59,729 | INFO     | [monitor] cgroup control has ended
[2025-10-13 04:40:07] 2025-10-13 02:40:00,691 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139943085524800)>', '<ExcThread(monitor, started 139942483179264)>']
[2025-10-13 04:40:07] 2025-10-13 02:40:00,741 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 04:40:07] 2025-10-13 02:40:00,741 | INFO     | [monitor] control thread has ended
[2025-10-13 04:40:07] 2025-10-13 02:40:05,717 | INFO     | all workflow threads have been joined
[2025-10-13 04:40:07] 2025-10-13 02:40:05,717 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 04:40:07] 2025-10-13 02:40:05,717 | INFO     | traces error code: 0
[2025-10-13 04:40:07] 2025-10-13 02:40:05,717 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 04:40:07] 2025-10-13 02:40:06,072 [wrapper] ==== pilot stdout END ====
[2025-10-13 04:40:07] 2025-10-13 02:40:06,123 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 04:40:07] 2025-10-13 02:40:06,291 [wrapper] pilotpid: 7659
[2025-10-13 04:40:07] 2025-10-13 02:40:06,314 [wrapper] Pilot exit status: 0
[2025-10-13 04:40:07] 2025-10-13 02:40:06,342 [wrapper] pandaids: 6839988421
[2025-10-13 04:40:07] 2025-10-13 02:40:06,379 [wrapper] cleanup supervisor_pilot 11053 7660
[2025-10-13 04:40:07] 2025-10-13 02:40:06,393 [wrapper] Test setup, not cleaning
[2025-10-13 04:40:07] 2025-10-13 02:40:06,397 [wrapper] apfmon messages muted
[2025-10-13 04:40:07] 2025-10-13 02:40:06,459 [wrapper] ==== wrapper stdout END ====
[2025-10-13 04:40:07] 2025-10-13 02:40:06,513 [wrapper] ==== wrapper stderr END ====
[2025-10-13 04:40:07]  *** Error codes and diagnostics ***
[2025-10-13 04:40:07]     "exeErrorCode": 0,
[2025-10-13 04:40:07]     "exeErrorDiag": "",
[2025-10-13 04:40:07]     "pilotErrorCode": 0,
[2025-10-13 04:40:07]     "pilotErrorDiag": "",
[2025-10-13 04:40:07]  *** Listing of results directory ***
[2025-10-13 04:40:07] total 408988
[2025-10-13 04:40:07] -rw-r--r--. 1 boinc boinc    557409 Oct 12 14:35 pilot3.tar.gz
[2025-10-13 04:40:07] -rw-r--r--. 1 boinc boinc      5112 Oct 12 14:45 queuedata.json
[2025-10-13 04:40:07] -rwx------. 1 boinc boinc     36292 Oct 12 14:46 runpilot2-wrapper.sh
[2025-10-13 04:40:07] -rw-r--r--. 1 boinc boinc       100 Oct 13 00:35 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 04:40:07] -rwxr-xr-x. 1 boinc boinc      7986 Oct 13 00:35 run_atlas
[2025-10-13 04:40:07] -rw-r--r--. 1 boinc boinc       105 Oct 13 00:35 job.xml
[2025-10-13 04:40:07] -rw-r--r--. 2 boinc boinc 220777790 Oct 13 00:35 EVNT.46676267._003810.pool.root.1
[2025-10-13 04:40:07] -rw-r--r--. 2 boinc boinc     15120 Oct 13 00:35 start_atlas.sh
[2025-10-13 04:40:07] drwxrwx--x. 2 boinc boinc        68 Oct 13 00:35 shared
[2025-10-13 04:40:07] -rw-r--r--. 2 boinc boinc    569686 Oct 13 00:35 input.tar.gz
[2025-10-13 04:40:07] -rw-r--r--. 1 boinc boinc      6391 Oct 13 00:35 init_data.xml
[2025-10-13 04:40:07] -rw-r--r--. 1 boinc boinc         0 Oct 13 00:35 boinc_lockfile
[2025-10-13 04:40:07] -rw-r--r--. 1 boinc boinc      2550 Oct 13 00:36 pandaJob.out
[2025-10-13 04:40:07] -rw-------. 1 boinc boinc    975603 Oct 13 00:39 agis_schedconf.cvmfs.json
[2025-10-13 04:40:07] drwx------. 5 boinc boinc      4096 Oct 13 00:39 pilot3
[2025-10-13 04:40:07] -rw-------. 1 boinc boinc 189401141 Oct 13 04:36 HITS.46676269._078514.pool.root.1
[2025-10-13 04:40:07] -rw-r--r--. 1 boinc boinc       531 Oct 13 04:36 boinc_task_state.xml
[2025-10-13 04:40:07] -rw-------. 1 boinc boinc      1015 Oct 13 04:37 memory_monitor_summary.json
[2025-10-13 04:40:07] -rw-------. 1 boinc boinc   1560580 Oct 13 04:37 agis_ddmendpoints.agis.ALL.json
[2025-10-13 04:40:07] -rw-------. 1 boinc boinc    450228 Oct 13 04:37 log.46676269._078514.job.log.tgz.1
[2025-10-13 04:40:07] -rw-------. 1 boinc boinc        95 Oct 13 04:39 pilot_heartbeat.json
[2025-10-13 04:40:07] -rw-------. 1 boinc boinc      7776 Oct 13 04:39 heartbeat.json
[2025-10-13 04:40:07] -rw-r--r--. 1 boinc boinc      8192 Oct 13 04:39 boinc_mmap_file
[2025-10-13 04:40:07] -rw-r--r--. 1 boinc boinc        28 Oct 13 04:39 wrapper_checkpoint.txt
[2025-10-13 04:40:07] -rw-------. 1 boinc boinc      4884 Oct 13 04:40 pilotlog.txt
[2025-10-13 04:40:07] -rw-------. 1 boinc boinc   1920892 Oct 13 04:40 log.46676269._078514.job.log.1
[2025-10-13 04:40:07] -rw-------. 1 boinc boinc       357 Oct 13 04:40 output.list
[2025-10-13 04:40:07] -rw-r--r--. 1 boinc boinc       620 Oct 13 04:40 runtime_log
[2025-10-13 04:40:07] -rw-------. 1 boinc boinc   2385920 Oct 13 04:40 result.tar.gz
[2025-10-13 04:40:07] -rw-r--r--. 1 boinc boinc      8717 Oct 13 04:40 runtime_log.err
[2025-10-13 04:40:07] -rw-------. 1 boinc boinc       656 Oct 13 04:40 lkVMDm8dAS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmJrjNDmHTKQPo.diag
[2025-10-13 04:40:07] -rw-r--r--. 1 boinc boinc     20614 Oct 13 04:40 stderr.txt
[2025-10-13 04:40:07] HITS file was successfully produced:
[2025-10-13 04:40:07] -rw-------. 1 boinc boinc 189401141 Oct 13 04:36 shared/HITS.pool.root.1
[2025-10-13 04:40:07]  *** Contents of shared directory: ***
[2025-10-13 04:40:07] total 403476
[2025-10-13 04:40:07] -rw-r--r--. 2 boinc boinc 220777790 Oct 13 00:35 ATLAS.root_0
[2025-10-13 04:40:07] -rw-r--r--. 2 boinc boinc     15120 Oct 13 00:35 start_atlas.sh
[2025-10-13 04:40:07] -rw-r--r--. 2 boinc boinc    569686 Oct 13 00:35 input.tar.gz
[2025-10-13 04:40:07] -rw-------. 1 boinc boinc 189401141 Oct 13 04:36 HITS.pool.root.1
[2025-10-13 04:40:07] -rw-------. 1 boinc boinc   2385920 Oct 13 04:40 result.tar.gz
04:40:09 (3885): run_atlas exited; CPU time 51871.925215
04:40:09 (3885): called boinc_finish(0)

</stderr_txt>
]]>

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