Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:25:42 (29373): wrapper (7.7.26015): starting
20:25:42 (29373): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 20:25:42] Arguments: --nthreads 8
[2025-10-12 20:25:42] Threads: 8
[2025-10-12 20:25:42] Checking for CVMFS
[2025-10-12 20:25:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 20:25:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 20:25:43] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 20:25:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 20:25:44] 2.11.2.0 672 21972 81988 151631 3 60 21629539 25165824 4632 130560 0 5213007 99.917 2223859 1365 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-10-12 20:25:44] CVMFS is ok
[2025-10-12 20:25:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 20:25:44] Checking for apptainer binary...
[2025-10-12 20:25:44] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 20:25:44] Running /usr/bin/apptainer --version
[2025-10-12 20:25:44] apptainer version 1.3.2-1.el7
[2025-10-12 20:25:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 20:25:55] cg-vwn400.simple-grid.lan
[2025-10-12 20:25:55] apptainer works
[2025-10-12 20:25:55] Set ATHENA_PROC_NUMBER=8
[2025-10-12 20:25:55] Set ATHENA_CORE_NUMBER=8
[2025-10-12 20:25:56] Starting ATLAS job with PandaID=6839988420
[2025-10-12 20:25:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/19 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 00:35:48]  *** The last 200 lines of the pilot log: ***
[2025-10-13 00:35:48] 2025-10-12 22:34:38,347 | INFO     | monitor loop #1069: job 0:6839988420 is in state 'finished'
[2025-10-13 00:35:48] 2025-10-12 22:34:38,347 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 00:35:48] 2025-10-12 22:34:38,762 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-13 00:35:48] 2025-10-12 22:34:38,763 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-10-13 00:35:48] 2025-10-12 22:34:38,765 | INFO     | using path: /var/lib/boinc/slots/19/PanDA_Pilot-6839988420/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 00:35:48] 2025-10-12 22:34:38,766 | INFO     | extracted standard info from prmon json
[2025-10-13 00:35:48] 2025-10-12 22:34:38,766 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 00:35:48] 2025-10-12 22:34:38,766 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 00:35:48] 2025-10-12 22:34:38,767 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 00:35:48] 2025-10-12 22:34:38,767 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 00:35:48] 2025-10-12 22:34:38,773 | INFO     | fitting pss+swap vs Time
[2025-10-13 00:35:48] 2025-10-12 22:34:38,773 | INFO     | sum of square deviations: 3871990738.0
[2025-10-13 00:35:48] 2025-10-12 22:34:38,775 | INFO     | sum of deviations: 57449960551.99999
[2025-10-13 00:35:48] 2025-10-12 22:34:38,776 | INFO     | mean x: 1760301278.5
[2025-10-13 00:35:48] 2025-10-12 22:34:38,776 | INFO     | mean y: 2448828.6810344825
[2025-10-13 00:35:48] 2025-10-12 22:34:38,776 | INFO     | -- intersect: -26115702234.277462
[2025-10-13 00:35:48] 2025-10-12 22:34:38,776 | INFO     | intersect: -26115702234.277462
[2025-10-13 00:35:48] 2025-10-12 22:34:38,776 | INFO     | chi2: 4.704675652369964
[2025-10-13 00:35:48] 2025-10-12 22:34:38,777 | INFO     | sum of square deviations: 3627000098.0
[2025-10-13 00:35:48] 2025-10-12 22:34:38,779 | INFO     | sum of deviations: 71396615885.99998
[2025-10-13 00:35:48] 2025-10-12 22:34:38,779 | INFO     | mean x: 1760301126.0
[2025-10-13 00:35:48] 2025-10-12 22:34:38,779 | INFO     | mean y: 2457342.920704846
[2025-10-13 00:35:48] 2025-10-12 22:34:38,779 | INFO     | -- intersect: -34648642723.49988
[2025-10-13 00:35:48] 2025-10-12 22:34:38,779 | INFO     | intersect: -34648642723.49988
[2025-10-13 00:35:48] 2025-10-12 22:34:38,780 | INFO     | chi2: 3.9610793567977223
[2025-10-13 00:35:48] 2025-10-12 22:34:38,780 | INFO     | current chi2=3.9610793567977223 (change=15.805474181788872 %)
[2025-10-13 00:35:48] 2025-10-12 22:34:38,780 | INFO     | right removable region: 226
[2025-10-13 00:35:48] 2025-10-12 22:34:38,781 | INFO     | sum of square deviations: 3627000098.0
[2025-10-13 00:35:48] 2025-10-12 22:34:38,782 | INFO     | sum of deviations: -13806867062.999998
[2025-10-13 00:35:48] 2025-10-12 22:34:38,783 | INFO     | mean x: 1760301431.0
[2025-10-13 00:35:48] 2025-10-12 22:34:38,783 | INFO     | mean y: 2493095.5462555066
[2025-10-13 00:35:48] 2025-10-12 22:34:38,783 | INFO     | -- intersect: 6703415949.677831
[2025-10-13 00:35:48] 2025-10-12 22:34:38,783 | INFO     | intersect: 6703415949.677831
[2025-10-13 00:35:48] 2025-10-12 22:34:38,783 | INFO     | chi2: 1.0156405393277743
[2025-10-13 00:35:48] 2025-10-12 22:34:38,783 | INFO     | current chi2=1.0156405393277743 (change=78.41210288713211 %)
[2025-10-13 00:35:48] 2025-10-12 22:34:38,787 | INFO     | sum of square deviations: 3392567795.5
[2025-10-13 00:35:48] 2025-10-12 22:34:38,789 | INFO     | sum of deviations: -27634876299.0
[2025-10-13 00:35:48] 2025-10-12 22:34:38,789 | INFO     | mean x: 1760301583.5
[2025-10-13 00:35:48] 2025-10-12 22:34:38,789 | INFO     | mean y: 2502020.603603604
[2025-10-13 00:35:48] 2025-10-12 22:34:38,789 | INFO     | -- intersect: 14341409727.468416
[2025-10-13 00:35:48] 2025-10-12 22:34:38,790 | INFO     | intersect: 14341409727.468416
[2025-10-13 00:35:48] 2025-10-12 22:34:38,790 | INFO     | chi2: 0.8217442729417891
[2025-10-13 00:35:48] 2025-10-12 22:34:38,790 | INFO     | current chi2=0.8217442729417891 (change=19.09103259252728 %)
[2025-10-13 00:35:48] 2025-10-12 22:34:38,790 | INFO     | left removable region: 20
[2025-10-13 00:35:48] 2025-10-12 22:34:38,791 | INFO     | sum of square deviations: 2710627567.5
[2025-10-13 00:35:48] 2025-10-12 22:34:38,792 | INFO     | sum of deviations: -9793707807.000002
[2025-10-13 00:35:48] 2025-10-12 22:34:38,793 | INFO     | mean x: 1760301705.5
[2025-10-13 00:35:48] 2025-10-12 22:34:38,793 | INFO     | mean y: 2510209.339805825
[2025-10-13 00:35:48] 2025-10-12 22:34:38,793 | INFO     | -- intersect: 6362616910.287673
[2025-10-13 00:35:48] 2025-10-12 22:34:38,793 | INFO     | intersect: 6362616910.287673
[2025-10-13 00:35:48] 2025-10-12 22:34:38,794 | INFO     | chi2: 0.027368912396488122
[2025-10-13 00:35:48] 2025-10-12 22:34:38,794 | INFO     | -- intersect: 6362616910.287673
[2025-10-13 00:35:48] 2025-10-12 22:34:38,794 | INFO     | current memory leak: -3.61 B/s (using 206 data points, chi2=0.03)
[2025-10-13 00:35:48] 2025-10-12 22:34:38,795 | INFO     | could have reported an average CPU frequency of 1999 MHz (11 samples)
[2025-10-13 00:35:48] 2025-10-12 22:34:38,795 | INFO     | ..............................
[2025-10-13 00:35:48] 2025-10-12 22:34:38,795 | INFO     | . Timing measurements:
[2025-10-13 00:35:48] 2025-10-12 22:34:38,795 | INFO     | . get job = 0 s
[2025-10-13 00:35:48] 2025-10-12 22:34:38,796 | INFO     | . initial setup = 4 s
[2025-10-13 00:35:48] 2025-10-12 22:34:38,796 | INFO     | . payload setup = 122 s
[2025-10-13 00:35:48] 2025-10-12 22:34:38,796 | INFO     | . stage-in = 0 s
[2025-10-13 00:35:48] 2025-10-12 22:34:38,796 | INFO     | . payload execution = 14302 s
[2025-10-13 00:35:48] 2025-10-12 22:34:38,796 | INFO     | . stage-out = 3 s
[2025-10-13 00:35:48] 2025-10-12 22:34:38,796 | INFO     | . log creation = 1 s
[2025-10-13 00:35:48] 2025-10-12 22:34:38,796 | INFO     | ..............................
[2025-10-13 00:35:48] 2025-10-12 22:34:38,945 | INFO     | 
[2025-10-13 00:35:48] 2025-10-12 22:34:38,945 | INFO     | job summary report
[2025-10-13 00:35:48] 2025-10-12 22:34:38,945 | INFO     | --------------------------------------------------
[2025-10-13 00:35:48] 2025-10-12 22:34:38,945 | INFO     | PanDA job id: 6839988420
[2025-10-13 00:35:48] 2025-10-12 22:34:38,945 | INFO     | task id: 46676269
[2025-10-13 00:35:48] 2025-10-12 22:34:38,945 | INFO     | errors: (none)
[2025-10-13 00:35:48] 2025-10-12 22:34:38,945 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 00:35:48] 2025-10-12 22:34:38,945 | INFO     | pilot state: finished 
[2025-10-13 00:35:48] 2025-10-12 22:34:38,946 | INFO     | transexitcode: 0
[2025-10-13 00:35:48] 2025-10-12 22:34:38,946 | INFO     | exeerrorcode: 0
[2025-10-13 00:35:48] 2025-10-12 22:34:38,946 | INFO     | exeerrordiag: 
[2025-10-13 00:35:48] 2025-10-12 22:34:38,946 | INFO     | exitcode: 0
[2025-10-13 00:35:48] 2025-10-12 22:34:38,946 | INFO     | exitmsg: OK
[2025-10-13 00:35:48] 2025-10-12 22:34:38,946 | INFO     | cpuconsumptiontime: 54435 s
[2025-10-13 00:35:48] 2025-10-12 22:34:38,946 | INFO     | nevents: 400
[2025-10-13 00:35:48] 2025-10-12 22:34:38,946 | INFO     | neventsw: 0
[2025-10-13 00:35:48] 2025-10-12 22:34:38,946 | INFO     | pid: 7346
[2025-10-13 00:35:48] 2025-10-12 22:34:38,946 | INFO     | pgrp: 7346
[2025-10-13 00:35:48] 2025-10-12 22:34:38,946 | INFO     | corecount: 8
[2025-10-13 00:35:48] 2025-10-12 22:34:38,946 | INFO     | event service: False
[2025-10-13 00:35:48] 2025-10-12 22:34:38,947 | INFO     | sizes: {0: 2348687, 1: 2348886, 12: 2348886, 23: 2348914, 33: 2348942, 44: 2348998, 55: 2349154, 66: 2349182, 76: 2349210, 87: 2349266, 93: 2349556, 98: 2349864, 1
[2025-10-13 00:35:48] 2025-10-12 22:34:38,947 | INFO     | --------------------------------------------------
[2025-10-13 00:35:48] 2025-10-12 22:34:38,947 | INFO     | 
[2025-10-13 00:35:48] 2025-10-12 22:34:38,947 | INFO     | executing command: ls -lF /var/lib/boinc/slots/19
[2025-10-13 00:35:48] 2025-10-12 22:34:39,238 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 00:35:48] 2025-10-12 22:34:39,239 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 00:35:48] 2025-10-12 22:34:39,239 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 00:35:48] 2025-10-12 22:34:39,239 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 00:35:48] 2025-10-12 22:34:39,239 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 00:35:48] 2025-10-12 22:34:39,239 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 00:35:48] 2025-10-12 22:34:39,239 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 00:35:48] 2025-10-12 22:34:39,239 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 00:35:48] 2025-10-12 22:34:39,239 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 00:35:48] 2025-10-12 22:34:39,239 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 00:35:48] 2025-10-12 22:34:39,239 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 00:35:48] 2025-10-12 22:34:39,239 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 00:35:48] 2025-10-12 22:34:39,240 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 00:35:48] 2025-10-12 22:34:39,240 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 00:35:48] 2025-10-12 22:34:39,240 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 00:35:48] 2025-10-12 22:34:39,240 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 00:35:48] 2025-10-12 22:34:39,240 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 00:35:48] 2025-10-12 22:34:39,240 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 00:35:48] 2025-10-12 22:34:39,240 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 00:35:48] 2025-10-12 22:34:39,240 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 00:35:48] 2025-10-12 22:34:39,240 | INFO     | job 6839988420 has completed (purged errors)
[2025-10-13 00:35:48] 2025-10-12 22:34:39,241 | INFO     | overall cleanup function is called
[2025-10-13 00:35:48] 2025-10-12 22:34:40,250 | INFO     | --- collectZombieJob: --- 10, [7346]
[2025-10-13 00:35:48] 2025-10-12 22:34:40,250 | INFO     | zombie collector waiting for pid 7346
[2025-10-13 00:35:48] 2025-10-12 22:34:40,250 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 00:35:48] 2025-10-12 22:34:40,250 | INFO     | collected zombie processes
[2025-10-13 00:35:48] 2025-10-12 22:34:40,250 | INFO     | will attempt to kill all subprocesses of pid=7346
[2025-10-13 00:35:48] 2025-10-12 22:34:40,381 | INFO     | process IDs to be killed: [7346] (in reverse order)
[2025-10-13 00:35:48] 2025-10-12 22:34:41,261 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 00:35:48] 2025-10-12 22:34:41,261 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 00:35:48] 2025-10-12 22:34:41,265 | INFO     | did not find any defunct processes belonging to 7346
[2025-10-13 00:35:48] 2025-10-12 22:34:41,268 | INFO     | did not find any defunct processes belonging to 7346
[2025-10-13 00:35:48] 2025-10-12 22:34:41,268 | INFO     | ready for new job
[2025-10-13 00:35:48] 2025-10-12 22:34:41,268 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 00:35:48] 2025-10-12 22:34:41,271 | INFO     | ***************************************
[2025-10-13 00:35:48] 2025-10-12 22:34:41,271 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 00:35:48] 2025-10-12 22:34:41,271 | INFO     | ***************************************
[2025-10-13 00:35:48] 2025-10-12 22:34:41,271 | INFO     | 
[2025-10-13 00:35:48] 2025-10-12 22:34:41,272 | INFO     | pilot is running in a VM
[2025-10-13 00:35:48] 2025-10-12 22:34:41,272 | INFO     | architecture information:
[2025-10-13 00:35:48] 2025-10-12 22:34:41,276 | INFO     | executing command: cat /etc/os-release
[2025-10-13 00:35:48] 2025-10-12 22:34:41,475 | INFO     | cat /etc/os-release:
[2025-10-13 00:35:48] NAME="CentOS Linux"
[2025-10-13 00:35:48] VERSION="7 (Core)"
[2025-10-13 00:35:48] ID="centos"
[2025-10-13 00:35:48] ID_LIKE="rhel fedora"
[2025-10-13 00:35:48] VERSION_ID="7"
[2025-10-13 00:35:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 00:35:48] ANSI_COLOR="0;31"
[2025-10-13 00:35:48] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 00:35:48] HOME_URL="https://www.centos.org/"
[2025-10-13 00:35:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 00:35:48] 
[2025-10-13 00:35:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 00:35:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 00:35:48] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 00:35:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 00:35:48] 
[2025-10-13 00:35:48] 2025-10-12 22:34:41,475 | INFO     | ***************************************
[2025-10-13 00:35:48] 2025-10-12 22:34:41,979 | INFO     | executing command: df -mP /var/lib/boinc/slots/19
[2025-10-13 00:35:48] 2025-10-12 22:34:42,176 | INFO     | sufficient remaining disk space (495374565376 B)
[2025-10-13 00:35:48] 2025-10-12 22:34:42,177 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 00:35:48] 2025-10-12 22:34:42,177 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 00:35:48] 2025-10-12 22:34:42,177 | INFO     | update_server=False
[2025-10-13 00:35:48] 2025-10-12 22:34:42,177 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 00:35:48] 2025-10-12 22:34:42,182 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 00:35:48] 2025-10-12 22:34:42,182 | INFO     | aborting loop
[2025-10-13 00:35:48] 2025-10-12 22:34:42,593 | INFO     | all data control threads have been joined
[2025-10-13 00:35:48] 2025-10-12 22:34:43,030 | INFO     | all job control threads have been joined
[2025-10-13 00:35:48] 2025-10-12 22:34:43,183 | INFO     | [job] retrieve thread has finished
[2025-10-13 00:35:48] 2025-10-12 22:34:43,188 | INFO     | [job] job monitor thread has finished
[2025-10-13 00:35:48] 2025-10-12 22:34:43,216 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 00:35:48] 2025-10-12 22:34:43,352 | INFO     | all payload control threads have been joined
[2025-10-13 00:35:48] 2025-10-12 22:34:43,476 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 00:35:48] 2025-10-12 22:34:43,539 | INFO     | [job] validate thread has finished
[2025-10-13 00:35:48] 2025-10-12 22:34:43,582 | INFO     | [data] copytool_in thread has finished
[2025-10-13 00:35:48] 2025-10-12 22:34:43,595 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 00:35:48] 2025-10-12 22:34:43,599 | INFO     | [data] control thread has finished
[2025-10-13 00:35:48] 2025-10-12 22:34:43,739 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 00:35:48] 2025-10-12 22:34:43,882 | INFO     | [payload] failed_post thread has finished
[2025-10-13 00:35:48] 2025-10-12 22:34:43,951 | INFO     | [payload] validate_post thread has finished
[2025-10-13 00:35:48] 2025-10-12 22:34:43,959 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 00:35:48] 2025-10-12 22:34:44,036 | INFO     | [job] control thread has finished
[2025-10-13 00:35:48] 2025-10-12 22:34:44,341 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 00:35:48] 2025-10-12 22:34:44,358 | INFO     | [payload] control thread has finished
[2025-10-13 00:35:48] 2025-10-12 22:34:44,965 | INFO     | [job] queue monitor thread has finished
[2025-10-13 00:35:48] 2025-10-12 22:34:45,203 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 00:35:48] 2025-10-12 22:34:45,224 | INFO     | [data] copytool_out thread has finished
[2025-10-13 00:35:48] 2025-10-12 22:34:49,212 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 00:35:48] 2025-10-12 22:35:10,571 | INFO     | PID=758 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j
[2025-10-13 00:35:48] 2025-10-12 22:35:10,571 | INFO     | .. there are 9 such processes running
[2025-10-13 00:35:48] 2025-10-12 22:35:10,572 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 00:35:48] 2025-10-12 22:35:10,572 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 00:35:48] 2025-10-12 22:35:10,572 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 00:35:48] 2025-10-12 22:35:39,305 | INFO     | [monitor] cgroup control has ended
[2025-10-13 00:35:48] 2025-10-12 22:35:39,716 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140561850591040)>', '<ExcThread(monitor, started 140561545664256)>']
[2025-10-13 00:35:48] 2025-10-12 22:35:39,751 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 00:35:48] 2025-10-12 22:35:39,751 | INFO     | [monitor] control thread has ended
[2025-10-13 00:35:48] 2025-10-12 22:35:44,742 | INFO     | all workflow threads have been joined
[2025-10-13 00:35:48] 2025-10-12 22:35:44,742 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 00:35:48] 2025-10-12 22:35:44,742 | INFO     | traces error code: 0
[2025-10-13 00:35:48] 2025-10-12 22:35:44,742 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 00:35:48] 2025-10-12 22:35:45,184 [wrapper] ==== pilot stdout END ====
[2025-10-13 00:35:48] 2025-10-12 22:35:45,203 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 00:35:48] 2025-10-12 22:35:45,222 [wrapper] pilotpid: 758
[2025-10-13 00:35:48] 2025-10-12 22:35:45,238 [wrapper] Pilot exit status: 0
[2025-10-13 00:35:48] 2025-10-12 22:35:45,570 [wrapper] pandaids: 6839988420
[2025-10-13 00:35:48] 2025-10-12 22:35:46,229 [wrapper] cleanup supervisor_pilot  1323 759
[2025-10-13 00:35:48] 2025-10-12 22:35:46,297 [wrapper] Test setup, not cleaning
[2025-10-13 00:35:48] 2025-10-12 22:35:46,350 [wrapper] apfmon messages muted
[2025-10-13 00:35:48] 2025-10-12 22:35:46,401 [wrapper] ==== wrapper stdout END ====
[2025-10-13 00:35:48] 2025-10-12 22:35:46,490 [wrapper] ==== wrapper stderr END ====
[2025-10-13 00:35:48]  *** Error codes and diagnostics ***
[2025-10-13 00:35:48]     "exeErrorCode": 0,
[2025-10-13 00:35:48]     "exeErrorDiag": "",
[2025-10-13 00:35:48]     "pilotErrorCode": 0,
[2025-10-13 00:35:48]     "pilotErrorDiag": "",
[2025-10-13 00:35:48]  *** Listing of results directory ***
[2025-10-13 00:35:48] total 413532
[2025-10-13 00:35:48] -rw-r--r--. 1 boinc boinc    557409 Oct 12 14:35 pilot3.tar.gz
[2025-10-13 00:35:48] -rw-r--r--. 1 boinc boinc      5112 Oct 12 14:45 queuedata.json
[2025-10-13 00:35:48] -rwx------. 1 boinc boinc     36292 Oct 12 14:46 runpilot2-wrapper.sh
[2025-10-13 00:35:48] -rw-r--r--. 1 boinc boinc       100 Oct 12 20:25 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 00:35:48] -rwxr-xr-x. 1 boinc boinc      7986 Oct 12 20:25 run_atlas
[2025-10-13 00:35:48] -rw-r--r--. 1 boinc boinc       105 Oct 12 20:25 job.xml
[2025-10-13 00:35:48] -rw-r--r--. 2 boinc boinc 220777790 Oct 12 20:25 EVNT.46676267._003810.pool.root.1
[2025-10-13 00:35:48] drwxrwx--x. 2 boinc boinc        68 Oct 12 20:25 shared
[2025-10-13 00:35:48] -rw-r--r--. 2 boinc boinc    569684 Oct 12 20:25 input.tar.gz
[2025-10-13 00:35:48] -rw-r--r--. 1 boinc boinc      6391 Oct 12 20:25 init_data.xml
[2025-10-13 00:35:48] -rw-r--r--. 2 boinc boinc     15120 Oct 12 20:25 start_atlas.sh
[2025-10-13 00:35:48] -rw-r--r--. 1 boinc boinc         0 Oct 12 20:25 boinc_lockfile
[2025-10-13 00:35:48] -rw-r--r--. 1 boinc boinc      2550 Oct 12 20:25 pandaJob.out
[2025-10-13 00:35:48] -rw-------. 1 boinc boinc    975528 Oct 12 20:29 agis_schedconf.cvmfs.json
[2025-10-13 00:35:48] drwx------. 5 boinc boinc      4096 Oct 12 20:29 pilot3
[2025-10-13 00:35:48] -rw-------. 1 boinc boinc 193957732 Oct 13 00:31 HITS.46676269._078513.pool.root.1
[2025-10-13 00:35:48] -rw-r--r--. 1 boinc boinc       531 Oct 13 00:32 boinc_task_state.xml
[2025-10-13 00:35:48] -rw-------. 1 boinc boinc      1017 Oct 13 00:32 memory_monitor_summary.json
[2025-10-13 00:35:48] -rw-------. 1 boinc boinc   1560580 Oct 13 00:32 agis_ddmendpoints.agis.ALL.json
[2025-10-13 00:35:48] -rw-------. 1 boinc boinc    452934 Oct 13 00:32 log.46676269._078513.job.log.tgz.1
[2025-10-13 00:35:48] -rw-------. 1 boinc boinc      7781 Oct 13 00:34 heartbeat.json
[2025-10-13 00:35:48] -rw-------. 1 boinc boinc        95 Oct 13 00:35 pilot_heartbeat.json
[2025-10-13 00:35:48] -rw-r--r--. 1 boinc boinc      8192 Oct 13 00:35 boinc_mmap_file
[2025-10-13 00:35:48] -rw-r--r--. 1 boinc boinc        28 Oct 13 00:35 wrapper_checkpoint.txt
[2025-10-13 00:35:48] -rw-------. 1 boinc boinc      4883 Oct 13 00:35 pilotlog.txt
[2025-10-13 00:35:48] -rw-------. 1 boinc boinc   1963512 Oct 13 00:35 log.46676269._078513.job.log.1
[2025-10-13 00:35:48] -rw-------. 1 boinc boinc       357 Oct 13 00:35 output.list
[2025-10-13 00:35:48] -rw-r--r--. 1 boinc boinc       620 Oct 13 00:35 runtime_log
[2025-10-13 00:35:48] -rw-------. 1 boinc boinc   2437120 Oct 13 00:35 result.tar.gz
[2025-10-13 00:35:48] -rw-------. 1 boinc boinc       657 Oct 13 00:35 s1SMDm8dAS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmIrjNDmyVNaDm.diag
[2025-10-13 00:35:48] -rw-r--r--. 1 boinc boinc      8717 Oct 13 00:35 runtime_log.err
[2025-10-13 00:35:48] -rw-r--r--. 1 boinc boinc     20802 Oct 13 00:35 stderr.txt
[2025-10-13 00:35:48] HITS file was successfully produced:
[2025-10-13 00:35:48] -rw-------. 1 boinc boinc 193957732 Oct 13 00:31 shared/HITS.pool.root.1
[2025-10-13 00:35:48]  *** Contents of shared directory: ***
[2025-10-13 00:35:48] total 407972
[2025-10-13 00:35:48] -rw-r--r--. 2 boinc boinc 220777790 Oct 12 20:25 ATLAS.root_0
[2025-10-13 00:35:48] -rw-r--r--. 2 boinc boinc    569684 Oct 12 20:25 input.tar.gz
[2025-10-13 00:35:48] -rw-r--r--. 2 boinc boinc     15120 Oct 12 20:25 start_atlas.sh
[2025-10-13 00:35:48] -rw-------. 1 boinc boinc 193957732 Oct 13 00:31 HITS.pool.root.1
[2025-10-13 00:35:48] -rw-------. 1 boinc boinc   2437120 Oct 13 00:35 result.tar.gz
00:35:50 (29373): run_atlas exited; CPU time 54642.891804
00:35:50 (29373): called boinc_finish(0)

</stderr_txt>
]]>

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