Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:12:02 (6562): wrapper (7.7.26015): starting
16:12:02 (6562): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 16:12:02] Arguments: --nthreads 8
[2025-10-12 16:12:02] Threads: 8
[2025-10-12 16:12:02] Checking for CVMFS
[2025-10-12 16:12:03] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 16:12:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 16:12:05] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 16:12:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 16:12:07] 2.11.2.0 672 21718 82528 151622 0 11 21519608 25165825 4632 130560 0 5090760 99.915 2182459 1357 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-10-12 16:12:07] CVMFS is ok
[2025-10-12 16:12:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 16:12:07] Checking for apptainer binary...
[2025-10-12 16:12:07] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 16:12:07] Running /usr/bin/apptainer --version
[2025-10-12 16:12:07] apptainer version 1.3.2-1.el7
[2025-10-12 16:12:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 16:12:14] cg-vwn400.simple-grid.lan
[2025-10-12 16:12:14] apptainer works
[2025-10-12 16:12:14] Set ATHENA_PROC_NUMBER=8
[2025-10-12 16:12:14] Set ATHENA_CORE_NUMBER=8
[2025-10-12 16:12:14] Starting ATLAS job with PandaID=6839660120
[2025-10-12 16:12:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/19 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 20:25:37]  *** The last 200 lines of the pilot log: ***
[2025-10-12 20:25:37] 2025-10-12 18:24:45,995 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 20:25:37] 2025-10-12 18:24:46,000 | INFO     | fitting pss+swap vs Time
[2025-10-12 20:25:37] 2025-10-12 18:24:46,000 | INFO     | sum of square deviations: 4024149870.0
[2025-10-12 20:25:37] 2025-10-12 18:24:46,002 | INFO     | sum of deviations: 26812247440.00016
[2025-10-12 20:25:37] 2025-10-12 18:24:46,002 | INFO     | mean x: 1760286189.0
[2025-10-12 20:25:37] 2025-10-12 18:24:46,003 | INFO     | mean y: 2485815.846808511
[2025-10-12 20:25:37] 2025-10-12 18:24:46,003 | INFO     | -- intersect: -11726010982.08256
[2025-10-12 20:25:37] 2025-10-12 18:24:46,003 | INFO     | intersect: -11726010982.08256
[2025-10-12 20:25:37] 2025-10-12 18:24:46,003 | INFO     | chi2: 5.592444173055774
[2025-10-12 20:25:37] 2025-10-12 18:24:46,004 | INFO     | sum of square deviations: 3772712597.5
[2025-10-12 20:25:37] 2025-10-12 18:24:46,005 | INFO     | sum of deviations: 41993218741.99998
[2025-10-12 20:25:37] 2025-10-12 18:24:46,006 | INFO     | mean x: 1760286036.5
[2025-10-12 20:25:37] 2025-10-12 18:24:46,006 | INFO     | mean y: 2494859.4782608696
[2025-10-12 20:25:37] 2025-10-12 18:24:46,006 | INFO     | -- intersect: -19590854665.26848
[2025-10-12 20:25:37] 2025-10-12 18:24:46,006 | INFO     | intersect: -19590854665.26848
[2025-10-12 20:25:37] 2025-10-12 18:24:46,006 | INFO     | chi2: 4.862512443854943
[2025-10-12 20:25:37] 2025-10-12 18:24:46,006 | INFO     | current chi2=4.862512443854943 (change=13.052105780825132 %)
[2025-10-12 20:25:37] 2025-10-12 18:24:46,007 | INFO     | right removable region: 229
[2025-10-12 20:25:37] 2025-10-12 18:24:46,007 | INFO     | sum of square deviations: 3772712597.5
[2025-10-12 20:25:37] 2025-10-12 18:24:46,009 | INFO     | sum of deviations: -50175356355.5
[2025-10-12 20:25:37] 2025-10-12 18:24:46,009 | INFO     | mean x: 1760286341.5
[2025-10-12 20:25:37] 2025-10-12 18:24:46,009 | INFO     | mean y: 2532440.717391304
[2025-10-12 20:25:37] 2025-10-12 18:24:46,009 | INFO     | -- intersect: 23413537702.822273
[2025-10-12 20:25:37] 2025-10-12 18:24:46,009 | INFO     | intersect: 23413537702.822273
[2025-10-12 20:25:37] 2025-10-12 18:24:46,010 | INFO     | chi2: 1.4566965692023603
[2025-10-12 20:25:37] 2025-10-12 18:24:46,010 | INFO     | current chi2=1.4566965692023603 (change=73.95241643679378 %)
[2025-10-12 20:25:37] 2025-10-12 18:24:46,010 | INFO     | sum of square deviations: 3531973200.0
[2025-10-12 20:25:37] 2025-10-12 18:24:46,012 | INFO     | sum of deviations: -69004967353.0
[2025-10-12 20:25:37] 2025-10-12 18:24:46,012 | INFO     | mean x: 1760286494.0
[2025-10-12 20:25:37] 2025-10-12 18:24:46,012 | INFO     | mean y: 2544254.0177777777
[2025-10-12 20:25:37] 2025-10-12 18:24:46,012 | INFO     | -- intersect: 34393663657.30114
[2025-10-12 20:25:37] 2025-10-12 18:24:46,012 | INFO     | intersect: 34393663657.30114
[2025-10-12 20:25:37] 2025-10-12 18:24:46,013 | INFO     | chi2: 0.9991185155006386
[2025-10-12 20:25:37] 2025-10-12 18:24:46,013 | INFO     | current chi2=0.9991185155006386 (change=31.412036204099568 %)
[2025-10-12 20:25:37] 2025-10-12 18:24:46,013 | INFO     | sum of square deviations: 3301699115.0
[2025-10-12 20:25:37] 2025-10-12 18:24:46,015 | INFO     | sum of deviations: -63268782515.99999
[2025-10-12 20:25:37] 2025-10-12 18:24:46,015 | INFO     | mean x: 1760286646.5
[2025-10-12 20:25:37] 2025-10-12 18:24:46,015 | INFO     | mean y: 2540449.9727272727
[2025-10-12 20:25:37] 2025-10-12 18:24:46,015 | INFO     | -- intersect: 33734019038.453213
[2025-10-12 20:25:37] 2025-10-12 18:24:46,016 | INFO     | intersect: 33734019038.453213
[2025-10-12 20:25:37] 2025-10-12 18:24:46,016 | INFO     | chi2: 0.9969057715808628
[2025-10-12 20:25:37] 2025-10-12 18:24:46,016 | INFO     | current chi2=0.9969057715808628 (change=0.2214696140094061 %)
[2025-10-12 20:25:37] 2025-10-12 18:24:46,016 | INFO     | left removable region: 30
[2025-10-12 20:25:37] 2025-10-12 18:24:46,017 | INFO     | sum of square deviations: 2443580700.0
[2025-10-12 20:25:37] 2025-10-12 18:24:46,018 | INFO     | sum of deviations: -26257849062.0
[2025-10-12 20:25:37] 2025-10-12 18:24:46,018 | INFO     | mean x: 1760286921.0
[2025-10-12 20:25:37] 2025-10-12 18:24:46,018 | INFO     | mean y: 2535572.618090452
[2025-10-12 20:25:37] 2025-10-12 18:24:46,018 | INFO     | -- intersect: 18917952721.489304
[2025-10-12 20:25:37] 2025-10-12 18:24:46,019 | INFO     | intersect: 18917952721.489304
[2025-10-12 20:25:37] 2025-10-12 18:24:46,019 | INFO     | chi2: 0.1601702078829338
[2025-10-12 20:25:37] 2025-10-12 18:24:46,019 | INFO     | -- intersect: 18917952721.489304
[2025-10-12 20:25:37] 2025-10-12 18:24:46,019 | INFO     | current memory leak: -10.75 B/s (using 199 data points, chi2=0.16)
[2025-10-12 20:25:37] 2025-10-12 18:24:46,020 | INFO     | could have reported an average CPU frequency of 1999 MHz (11 samples)
[2025-10-12 20:25:37] 2025-10-12 18:24:46,020 | INFO     | ..............................
[2025-10-12 20:25:37] 2025-10-12 18:24:46,020 | INFO     | . Timing measurements:
[2025-10-12 20:25:37] 2025-10-12 18:24:46,020 | INFO     | . get job = 0 s
[2025-10-12 20:25:37] 2025-10-12 18:24:46,020 | INFO     | . initial setup = 11 s
[2025-10-12 20:25:37] 2025-10-12 18:24:46,021 | INFO     | . payload setup = 128 s
[2025-10-12 20:25:37] 2025-10-12 18:24:46,021 | INFO     | . stage-in = 0 s
[2025-10-12 20:25:37] 2025-10-12 18:24:46,021 | INFO     | . payload execution = 14494 s
[2025-10-12 20:25:37] 2025-10-12 18:24:46,021 | INFO     | . stage-out = 7 s
[2025-10-12 20:25:37] 2025-10-12 18:24:46,021 | INFO     | . log creation = 1 s
[2025-10-12 20:25:37] 2025-10-12 18:24:46,021 | INFO     | ..............................
[2025-10-12 20:25:37] 2025-10-12 18:24:46,140 | INFO     | 
[2025-10-12 20:25:37] 2025-10-12 18:24:46,140 | INFO     | job summary report
[2025-10-12 20:25:37] 2025-10-12 18:24:46,141 | INFO     | --------------------------------------------------
[2025-10-12 20:25:37] 2025-10-12 18:24:46,141 | INFO     | PanDA job id: 6839660120
[2025-10-12 20:25:37] 2025-10-12 18:24:46,141 | INFO     | task id: 46676269
[2025-10-12 20:25:37] 2025-10-12 18:24:46,141 | INFO     | errors: (none)
[2025-10-12 20:25:37] 2025-10-12 18:24:46,141 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 20:25:37] 2025-10-12 18:24:46,141 | INFO     | pilot state: finished 
[2025-10-12 20:25:37] 2025-10-12 18:24:46,141 | INFO     | transexitcode: 0
[2025-10-12 20:25:37] 2025-10-12 18:24:46,141 | INFO     | exeerrorcode: 0
[2025-10-12 20:25:37] 2025-10-12 18:24:46,141 | INFO     | exeerrordiag: 
[2025-10-12 20:25:37] 2025-10-12 18:24:46,141 | INFO     | exitcode: 0
[2025-10-12 20:25:37] 2025-10-12 18:24:46,141 | INFO     | exitmsg: OK
[2025-10-12 20:25:37] 2025-10-12 18:24:46,141 | INFO     | cpuconsumptiontime: 54210 s
[2025-10-12 20:25:37] 2025-10-12 18:24:46,142 | INFO     | nevents: 400
[2025-10-12 20:25:37] 2025-10-12 18:24:46,142 | INFO     | neventsw: 0
[2025-10-12 20:25:37] 2025-10-12 18:24:46,142 | INFO     | pid: 17217
[2025-10-12 20:25:37] 2025-10-12 18:24:46,142 | INFO     | pgrp: 17217
[2025-10-12 20:25:37] 2025-10-12 18:24:46,142 | INFO     | corecount: 8
[2025-10-12 20:25:37] 2025-10-12 18:24:46,142 | INFO     | event service: False
[2025-10-12 20:25:37] 2025-10-12 18:24:46,142 | INFO     | sizes: {0: 2348687, 1: 2348886, 12: 2348886, 23: 2348914, 33: 2348942, 44: 2348998, 55: 2349154, 66: 2349182, 76: 2349210, 87: 2349266, 93: 2349556, 98: 2349864, 1
[2025-10-12 20:25:37] 2025-10-12 18:24:46,142 | INFO     | --------------------------------------------------
[2025-10-12 20:25:37] 2025-10-12 18:24:46,142 | INFO     | 
[2025-10-12 20:25:37] 2025-10-12 18:24:46,142 | INFO     | executing command: ls -lF /var/lib/boinc/slots/19
[2025-10-12 20:25:37] 2025-10-12 18:24:46,391 | INFO     | time since job start (14924s) is within the limit (172800.0s)
[2025-10-12 20:25:37] 2025-10-12 18:24:46,658 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 20:25:37] 2025-10-12 18:24:46,658 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 20:25:37] 2025-10-12 18:24:46,658 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 20:25:37] 2025-10-12 18:24:46,658 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 20:25:37] 2025-10-12 18:24:46,659 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 20:25:37] 2025-10-12 18:24:46,659 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 20:25:37] 2025-10-12 18:24:46,659 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 20:25:37] 2025-10-12 18:24:46,659 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 20:25:37] 2025-10-12 18:24:46,659 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 20:25:37] 2025-10-12 18:24:46,659 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 20:25:37] 2025-10-12 18:24:46,659 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 20:25:37] 2025-10-12 18:24:46,659 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 20:25:37] 2025-10-12 18:24:46,659 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 20:25:37] 2025-10-12 18:24:46,659 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 20:25:37] 2025-10-12 18:24:46,660 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 20:25:37] 2025-10-12 18:24:46,660 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 20:25:37] 2025-10-12 18:24:46,660 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 20:25:37] 2025-10-12 18:24:46,660 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 20:25:37] 2025-10-12 18:24:46,660 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 20:25:37] 2025-10-12 18:24:46,660 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 20:25:37] 2025-10-12 18:24:46,660 | INFO     | job 6839660120 has completed (purged errors)
[2025-10-12 20:25:37] 2025-10-12 18:24:46,660 | INFO     | overall cleanup function is called
[2025-10-12 20:25:37] 2025-10-12 18:24:47,670 | INFO     | --- collectZombieJob: --- 10, [17217]
[2025-10-12 20:25:37] 2025-10-12 18:24:47,670 | INFO     | zombie collector waiting for pid 17217
[2025-10-12 20:25:37] 2025-10-12 18:24:47,670 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 20:25:37] 2025-10-12 18:24:47,670 | INFO     | collected zombie processes
[2025-10-12 20:25:37] 2025-10-12 18:24:47,670 | INFO     | will attempt to kill all subprocesses of pid=17217
[2025-10-12 20:25:37] 2025-10-12 18:24:47,802 | INFO     | process IDs to be killed: [17217] (in reverse order)
[2025-10-12 20:25:37] 2025-10-12 18:24:48,302 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 20:25:37] 2025-10-12 18:24:48,303 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 20:25:37] 2025-10-12 18:24:48,306 | INFO     | did not find any defunct processes belonging to 17217
[2025-10-12 20:25:37] 2025-10-12 18:24:48,308 | INFO     | did not find any defunct processes belonging to 17217
[2025-10-12 20:25:37] 2025-10-12 18:24:48,313 | INFO     | ready for new job
[2025-10-12 20:25:37] 2025-10-12 18:24:48,313 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 20:25:37] 2025-10-12 18:24:48,315 | INFO     | ***************************************
[2025-10-12 20:25:37] 2025-10-12 18:24:48,315 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 20:25:37] 2025-10-12 18:24:48,315 | INFO     | ***************************************
[2025-10-12 20:25:37] 2025-10-12 18:24:48,316 | INFO     | 
[2025-10-12 20:25:37] 2025-10-12 18:24:48,316 | INFO     | pilot is running in a VM
[2025-10-12 20:25:37] 2025-10-12 18:24:48,316 | INFO     | architecture information:
[2025-10-12 20:25:37] 2025-10-12 18:24:48,331 | INFO     | executing command: cat /etc/os-release
[2025-10-12 20:25:37] 2025-10-12 18:24:48,589 | INFO     | cat /etc/os-release:
[2025-10-12 20:25:37] NAME="CentOS Linux"
[2025-10-12 20:25:37] VERSION="7 (Core)"
[2025-10-12 20:25:37] ID="centos"
[2025-10-12 20:25:37] ID_LIKE="rhel fedora"
[2025-10-12 20:25:37] VERSION_ID="7"
[2025-10-12 20:25:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 20:25:37] ANSI_COLOR="0;31"
[2025-10-12 20:25:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 20:25:37] HOME_URL="https://www.centos.org/"
[2025-10-12 20:25:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 20:25:37] 
[2025-10-12 20:25:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 20:25:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 20:25:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 20:25:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 20:25:37] 
[2025-10-12 20:25:37] 2025-10-12 18:24:48,589 | INFO     | ***************************************
[2025-10-12 20:25:37] 2025-10-12 18:24:49,093 | INFO     | executing command: df -mP /var/lib/boinc/slots/19
[2025-10-12 20:25:37] 2025-10-12 18:24:49,229 | INFO     | sufficient remaining disk space (495647195136 B)
[2025-10-12 20:25:37] 2025-10-12 18:24:49,229 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 20:25:37] 2025-10-12 18:24:49,229 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 20:25:37] 2025-10-12 18:24:49,230 | INFO     | update_server=False
[2025-10-12 20:25:37] 2025-10-12 18:24:49,230 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 20:25:37] 2025-10-12 18:24:49,231 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 20:25:37] 2025-10-12 18:24:49,235 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 20:25:37] 2025-10-12 18:24:49,235 | INFO     | aborting loop
[2025-10-12 20:25:37] 2025-10-12 18:24:49,459 | INFO     | all data control threads have been joined
[2025-10-12 20:25:37] 2025-10-12 18:24:49,871 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 20:25:37] 2025-10-12 18:24:50,236 | INFO     | [job] retrieve thread has finished
[2025-10-12 20:25:37] 2025-10-12 18:24:50,241 | INFO     | [job] job monitor thread has finished
[2025-10-12 20:25:37] 2025-10-12 18:24:50,244 | INFO     | [data] copytool_in thread has finished
[2025-10-12 20:25:37] 2025-10-12 18:24:50,265 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 20:25:37] 2025-10-12 18:24:50,465 | INFO     | [data] control thread has finished
[2025-10-12 20:25:37] 2025-10-12 18:24:50,504 | INFO     | all payload control threads have been joined
[2025-10-12 20:25:37] 2025-10-12 18:24:50,596 | INFO     | all job control threads have been joined
[2025-10-12 20:25:37] 2025-10-12 18:24:50,737 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 20:25:37] 2025-10-12 18:24:50,874 | INFO     | [job] validate thread has finished
[2025-10-12 20:25:37] 2025-10-12 18:24:51,027 | INFO     | [payload] validate_post thread has finished
[2025-10-12 20:25:37] 2025-10-12 18:24:51,150 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 20:25:37] 2025-10-12 18:24:51,160 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 20:25:37] 2025-10-12 18:24:51,511 | INFO     | [payload] control thread has finished
[2025-10-12 20:25:37] 2025-10-12 18:24:51,601 | INFO     | [job] control thread has finished
[2025-10-12 20:25:37] 2025-10-12 18:24:51,608 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 20:25:37] 2025-10-12 18:24:51,708 | INFO     | [payload] failed_post thread has finished
[2025-10-12 20:25:37] 2025-10-12 18:24:51,878 | INFO     | [data] copytool_out thread has finished
[2025-10-12 20:25:37] 2025-10-12 18:24:52,165 | INFO     | [job] queue monitor thread has finished
[2025-10-12 20:25:37] 2025-10-12 18:24:53,240 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 20:25:37] 2025-10-12 18:25:19,580 | INFO     | PID=10675 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 20:25:37] 2025-10-12 18:25:19,580 | INFO     | .. there are 9 such processes running
[2025-10-12 20:25:37] 2025-10-12 18:25:19,580 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 20:25:37] 2025-10-12 18:25:19,581 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 20:25:37] 2025-10-12 18:25:19,581 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 20:25:37] 2025-10-12 18:25:27,903 | INFO     | [monitor] cgroup control has ended
[2025-10-12 20:25:37] 2025-10-12 18:25:27,921 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140509502162752)>', '<ExcThread(monitor, started 140508823275264)>']
[2025-10-12 20:25:37] 2025-10-12 18:25:28,634 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 20:25:37] 2025-10-12 18:25:28,634 | INFO     | [monitor] control thread has ended
[2025-10-12 20:25:37] 2025-10-12 18:25:32,947 | INFO     | all workflow threads have been joined
[2025-10-12 20:25:37] 2025-10-12 18:25:32,947 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 20:25:37] 2025-10-12 18:25:32,947 | INFO     | traces error code: 0
[2025-10-12 20:25:37] 2025-10-12 18:25:32,947 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 20:25:37] 2025-10-12 18:25:33,358 [wrapper] ==== pilot stdout END ====
[2025-10-12 20:25:37] 2025-10-12 18:25:33,451 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 20:25:37] 2025-10-12 18:25:33,568 [wrapper] pilotpid: 10675
[2025-10-12 20:25:37] 2025-10-12 18:25:33,624 [wrapper] Pilot exit status: 0
[2025-10-12 20:25:37] 2025-10-12 18:25:34,085 [wrapper] pandaids: 6839660120
[2025-10-12 20:25:37] 2025-10-12 18:25:34,987 [wrapper] cleanup supervisor_pilot 26800 10676
[2025-10-12 20:25:37] 2025-10-12 18:25:35,089 [wrapper] Test setup, not cleaning
[2025-10-12 20:25:37] 2025-10-12 18:25:35,140 [wrapper] apfmon messages muted
[2025-10-12 20:25:37] 2025-10-12 18:25:35,194 [wrapper] ==== wrapper stdout END ====
[2025-10-12 20:25:37] 2025-10-12 18:25:35,280 [wrapper] ==== wrapper stderr END ====
[2025-10-12 20:25:37]  *** Error codes and diagnostics ***
[2025-10-12 20:25:37]     "exeErrorCode": 0,
[2025-10-12 20:25:37]     "exeErrorDiag": "",
[2025-10-12 20:25:37]     "pilotErrorCode": 0,
[2025-10-12 20:25:37]     "pilotErrorDiag": "",
[2025-10-12 20:25:37]  *** Listing of results directory ***
[2025-10-12 20:25:37] total 417204
[2025-10-12 20:25:37] -rw-r--r--. 1 boinc boinc    557409 Oct 12 08:54 pilot3.tar.gz
[2025-10-12 20:25:37] -rwx------. 1 boinc boinc     36292 Oct 12 09:50 runpilot2-wrapper.sh
[2025-10-12 20:25:37] -rw-r--r--. 1 boinc boinc      5112 Oct 12 09:50 queuedata.json
[2025-10-12 20:25:37] -rw-r--r--. 1 boinc boinc       100 Oct 12 16:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 20:25:37] -rwxr-xr-x. 1 boinc boinc      7986 Oct 12 16:12 run_atlas
[2025-10-12 20:25:37] -rw-r--r--. 1 boinc boinc       105 Oct 12 16:12 job.xml
[2025-10-12 20:25:37] -rw-r--r--. 2 boinc boinc 220404103 Oct 12 16:12 EVNT.46676267._003517.pool.root.1
[2025-10-12 20:25:37] -rw-r--r--. 2 boinc boinc     15120 Oct 12 16:12 start_atlas.sh
[2025-10-12 20:25:37] drwxrwx--x. 2 boinc boinc        68 Oct 12 16:12 shared
[2025-10-12 20:25:37] -rw-r--r--. 2 boinc boinc    569676 Oct 12 16:12 input.tar.gz
[2025-10-12 20:25:37] -rw-r--r--. 1 boinc boinc      6391 Oct 12 16:12 init_data.xml
[2025-10-12 20:25:37] -rw-r--r--. 1 boinc boinc         0 Oct 12 16:12 boinc_lockfile
[2025-10-12 20:25:37] -rw-r--r--. 1 boinc boinc      2550 Oct 12 16:12 pandaJob.out
[2025-10-12 20:25:37] -rw-------. 1 boinc boinc    975528 Oct 12 16:15 agis_schedconf.cvmfs.json
[2025-10-12 20:25:37] drwx------. 5 boinc boinc      4096 Oct 12 16:16 pilot3
[2025-10-12 20:25:37] -rw-------. 1 boinc boinc 198025820 Oct 12 20:21 HITS.46676269._073892.pool.root.1
[2025-10-12 20:25:37] -rw-r--r--. 1 boinc boinc       531 Oct 12 20:22 boinc_task_state.xml
[2025-10-12 20:25:37] -rw-------. 1 boinc boinc      1020 Oct 12 20:23 memory_monitor_summary.json
[2025-10-12 20:25:37] -rw-------. 1 boinc boinc   1560580 Oct 12 20:23 agis_ddmendpoints.agis.ALL.json
[2025-10-12 20:25:37] -rw-------. 1 boinc boinc    452455 Oct 12 20:23 log.46676269._073892.job.log.tgz.1
[2025-10-12 20:25:37] -rw-------. 1 boinc boinc        95 Oct 12 20:24 pilot_heartbeat.json
[2025-10-12 20:25:37] -rw-------. 1 boinc boinc      7783 Oct 12 20:24 heartbeat.json
[2025-10-12 20:25:37] -rw-r--r--. 1 boinc boinc      8192 Oct 12 20:25 boinc_mmap_file
[2025-10-12 20:25:37] -rw-------. 1 boinc boinc      4885 Oct 12 20:25 pilotlog.txt
[2025-10-12 20:25:37] -rw-r--r--. 1 boinc boinc        28 Oct 12 20:25 wrapper_checkpoint.txt
[2025-10-12 20:25:37] -rw-------. 1 boinc boinc   1992640 Oct 12 20:25 log.46676269._073892.job.log.1
[2025-10-12 20:25:37] -rw-------. 1 boinc boinc       357 Oct 12 20:25 output.list
[2025-10-12 20:25:37] -rw-r--r--. 1 boinc boinc       620 Oct 12 20:25 runtime_log
[2025-10-12 20:25:37] -rw-------. 1 boinc boinc   2467840 Oct 12 20:25 result.tar.gz
[2025-10-12 20:25:37] -rw-------. 1 boinc boinc       657 Oct 12 20:25 tf5KDmD25R8n9Rq4apOajLDm4fhM0noT9bVof3QYDm0TTMDmRTlGNm.diag
[2025-10-12 20:25:37] -rw-r--r--. 1 boinc boinc      8717 Oct 12 20:25 runtime_log.err
[2025-10-12 20:25:37] -rw-r--r--. 1 boinc boinc     20624 Oct 12 20:25 stderr.txt
[2025-10-12 20:25:37] HITS file was successfully produced:
[2025-10-12 20:25:37] -rw-------. 1 boinc boinc 198025820 Oct 12 20:21 shared/HITS.pool.root.1
[2025-10-12 20:25:37]  *** Contents of shared directory: ***
[2025-10-12 20:25:37] total 411616
[2025-10-12 20:25:37] -rw-r--r--. 2 boinc boinc 220404103 Oct 12 16:12 ATLAS.root_0
[2025-10-12 20:25:37] -rw-r--r--. 2 boinc boinc     15120 Oct 12 16:12 start_atlas.sh
[2025-10-12 20:25:37] -rw-r--r--. 2 boinc boinc    569676 Oct 12 16:12 input.tar.gz
[2025-10-12 20:25:37] -rw-------. 1 boinc boinc 198025820 Oct 12 20:21 HITS.pool.root.1
[2025-10-12 20:25:37] -rw-------. 1 boinc boinc   2467840 Oct 12 20:25 result.tar.gz
20:25:39 (6562): run_atlas exited; CPU time 54420.823730
20:25:39 (6562): called boinc_finish(0)

</stderr_txt>
]]>

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