Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
10:07:38 (21771): wrapper (7.7.26015): starting
10:07:38 (21771): wrapper: running run_atlas (--nthreads 4)
[2025-10-12 10:07:38] Arguments: --nthreads 4
[2025-10-12 10:07:38] Threads: 4
[2025-10-12 10:07:38] Checking for CVMFS
[2025-10-12 10:07:39] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 10:07:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 10:07:39] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 10:07:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 10:07:39] 2.11.2.0 2311 42743 69404 151622 0 56 10251697 20275201 1 130560 0 22555031 99.989 1384780 55797 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 10:07:39] CVMFS is ok
[2025-10-12 10:07:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 10:07:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 10:07:39] Further information can be found at the LHC@home message board.
[2025-10-12 10:07:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 10:07:39] Checking for apptainer binary...
[2025-10-12 10:07:39] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 10:07:39] Running /usr/bin/apptainer --version
[2025-10-12 10:07:39] apptainer version 1.3.2-1.el7
[2025-10-12 10:07:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 10:07:39] c-205-34.aglt2.org
[2025-10-12 10:07:39] apptainer works
[2025-10-12 10:07:39] Set ATHENA_PROC_NUMBER=4
[2025-10-12 10:07:39] Set ATHENA_CORE_NUMBER=4
[2025-10-12 10:07:39] Starting ATLAS job with PandaID=6839988424
[2025-10-12 10:07:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 11:43:03]  *** The last 200 lines of the pilot log: ***
[2025-10-12 11:43:03]  replicas=None
[2025-10-12 11:43:03]  scope=mc23_13p6TeV
[2025-10-12 11:43:03]  status=None
[2025-10-12 11:43:03]  status_code=0
[2025-10-12 11:43:03]  storage_token=
[2025-10-12 11:43:03]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6839988424/log.46676269._078517.job.log.tgz.1
[2025-10-12 11:43:03]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/65/35/log.46676269._078517.job.log.tgz.1
[2025-10-12 11:43:03]  workdir=None
[2025-10-12 11:43:03] ]
[2025-10-12 11:43:03] 2025-10-12 15:42:44,415 | INFO     | transferring file log.46676269._078517.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6839988424/log.46676269._078517.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-12 11:43:03] 2025-10-12 15:42:44,416 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6839988424/log.46676269._078517.job.log.tgz.1 /tmp/boinchome/slots/0/log.46676269._078517.job
[2025-10-12 11:43:03] 2025-10-12 15:42:44,428 | INFO     | adding to output.list: log.46676269._078517.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/65/35/log.46676269._078517.job.log.tg
[2025-10-12 11:43:03] 2025-10-12 15:42:44,428 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 11:43:03] 2025-10-12 15:42:44,428 | INFO     | summary of transferred files:
[2025-10-12 11:43:03] 2025-10-12 15:42:44,428 | INFO     |  -- lfn=log.46676269._078517.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 11:43:03] 2025-10-12 15:42:44,428 | INFO     | stage-out finished correctly
[2025-10-12 11:43:03] 2025-10-12 15:42:44,743 | INFO     | PID=25427 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 11:43:03] 2025-10-12 15:42:45,411 | INFO     | monitor loop #429: job 0:6839988424 is in state 'finished'
[2025-10-12 11:43:03] 2025-10-12 15:42:45,411 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 11:43:03] 2025-10-12 15:42:45,743 | INFO     | time since job start (5697s) is within the limit (172800.0s)
[2025-10-12 11:43:03] 2025-10-12 15:42:47,749 | INFO     | time since job start (5699s) is within the limit (172800.0s)
[2025-10-12 11:43:03] 2025-10-12 15:42:47,805 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 11:43:03] 2025-10-12 15:42:47,914 | INFO     | monitor loop #430: job 0:6839988424 is in state 'finished'
[2025-10-12 11:43:03] 2025-10-12 15:42:47,914 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 11:43:03] 2025-10-12 15:42:48,013 | INFO     | job 6839988424 has state=finished
[2025-10-12 11:43:03] 2025-10-12 15:42:48,013 | INFO     | preparing for final server update for job 6839988424 in state='finished'
[2025-10-12 11:43:03] 2025-10-12 15:42:48,013 | INFO     | this job has now completed (state=finished)
[2025-10-12 11:43:03] 2025-10-12 15:42:48,014 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 11:43:03] 2025-10-12 15:42:48,014 | INFO     | log transfer has been attempted: DONE
[2025-10-12 11:43:03] 2025-10-12 15:42:48,014 | INFO     | job 6839988424 has finished - writing final server update
[2025-10-12 11:43:03] 2025-10-12 15:42:48,014 | INFO     | total number of processed events: 400 (read)
[2025-10-12 11:43:03] 2025-10-12 15:42:48,015 | INFO     | executing command: lscpu
[2025-10-12 11:43:03] 2025-10-12 15:42:48,040 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 11:43:03] 2025-10-12 15:42:49,754 | INFO     | time since job start (5701s) is within the limit (172800.0s)
[2025-10-12 11:43:03] 2025-10-12 15:42:50,417 | INFO     | monitor loop #431: job 0:6839988424 is in state 'finished'
[2025-10-12 11:43:03] 2025-10-12 15:42:50,417 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 11:43:03] 2025-10-12 15:42:51,395 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-12 11:43:03] 2025-10-12 15:42:51,396 | INFO     | found 4 cores (4 cores per socket, 1 socket) , CPU MHz: 1600.8905
[2025-10-12 11:43:03] 2025-10-12 15:42:51,398 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6839988424/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 11:43:03] 2025-10-12 15:42:51,398 | INFO     | extracted standard info from prmon json
[2025-10-12 11:43:03] 2025-10-12 15:42:51,398 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 11:43:03] 2025-10-12 15:42:51,398 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 11:43:03] 2025-10-12 15:42:51,399 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 11:43:03] 2025-10-12 15:42:51,399 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 11:43:03] 2025-10-12 15:42:51,400 | INFO     | fitting pss+swap vs Time
[2025-10-12 11:43:03] 2025-10-12 15:42:51,401 | INFO     | sum of square deviations: 197203697.5
[2025-10-12 11:43:03] 2025-10-12 15:42:51,401 | INFO     | sum of deviations: -767031842.5
[2025-10-12 11:43:03] 2025-10-12 15:42:51,401 | INFO     | mean x: 1760280985.5
[2025-10-12 11:43:03] 2025-10-12 15:42:51,401 | INFO     | mean y: 2360941.8720930233
[2025-10-12 11:43:03] 2025-10-12 15:42:51,401 | INFO     | -- intersect: 6849045789.785662
[2025-10-12 11:43:03] 2025-10-12 15:42:51,401 | INFO     | intersect: 6849045789.785662
[2025-10-12 11:43:03] 2025-10-12 15:42:51,401 | INFO     | chi2: 0.03476200113206593
[2025-10-12 11:43:03] 2025-10-12 15:42:51,402 | INFO     | -- intersect: 6849045789.785662
[2025-10-12 11:43:03] 2025-10-12 15:42:51,402 | INFO     | current memory leak: -3.89 B/s (using 86 data points, chi2=0.03)
[2025-10-12 11:43:03] 2025-10-12 15:42:51,402 | INFO     | could have reported an average CPU frequency of 2867 MHz (7 samples)
[2025-10-12 11:43:03] 2025-10-12 15:42:51,402 | INFO     | ..............................
[2025-10-12 11:43:03] 2025-10-12 15:42:51,402 | INFO     | . Timing measurements:
[2025-10-12 11:43:03] 2025-10-12 15:42:51,402 | INFO     | . get job = 0 s
[2025-10-12 11:43:03] 2025-10-12 15:42:51,402 | INFO     | . initial setup = 2 s
[2025-10-12 11:43:03] 2025-10-12 15:42:51,402 | INFO     | . payload setup = 3 s
[2025-10-12 11:43:03] 2025-10-12 15:42:51,402 | INFO     | . stage-in = 0 s
[2025-10-12 11:43:03] 2025-10-12 15:42:51,402 | INFO     | . payload execution = 5675 s
[2025-10-12 11:43:03] 2025-10-12 15:42:51,403 | INFO     | . stage-out = 0 s
[2025-10-12 11:43:03] 2025-10-12 15:42:51,403 | INFO     | . log creation = 0 s
[2025-10-12 11:43:03] 2025-10-12 15:42:51,403 | INFO     | ..............................
[2025-10-12 11:43:03] 2025-10-12 15:42:51,759 | INFO     | time since job start (5703s) is within the limit (172800.0s)
[2025-10-12 11:43:03] 2025-10-12 15:42:51,930 | INFO     | 
[2025-10-12 11:43:03] 2025-10-12 15:42:51,931 | INFO     | job summary report
[2025-10-12 11:43:03] 2025-10-12 15:42:51,931 | INFO     | --------------------------------------------------
[2025-10-12 11:43:03] 2025-10-12 15:42:51,931 | INFO     | PanDA job id: 6839988424
[2025-10-12 11:43:03] 2025-10-12 15:42:51,931 | INFO     | task id: 46676269
[2025-10-12 11:43:03] 2025-10-12 15:42:51,931 | INFO     | errors: (none)
[2025-10-12 11:43:03] 2025-10-12 15:42:51,931 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 11:43:03] 2025-10-12 15:42:51,931 | INFO     | pilot state: finished 
[2025-10-12 11:43:03] 2025-10-12 15:42:51,931 | INFO     | transexitcode: 0
[2025-10-12 11:43:03] 2025-10-12 15:42:51,931 | INFO     | exeerrorcode: 0
[2025-10-12 11:43:03] 2025-10-12 15:42:51,931 | INFO     | exeerrordiag: 
[2025-10-12 11:43:03] 2025-10-12 15:42:51,931 | INFO     | exitcode: 0
[2025-10-12 11:43:03] 2025-10-12 15:42:51,931 | INFO     | exitmsg: OK
[2025-10-12 11:43:03] 2025-10-12 15:42:51,932 | INFO     | cpuconsumptiontime: 21959 s
[2025-10-12 11:43:03] 2025-10-12 15:42:51,932 | INFO     | nevents: 400
[2025-10-12 11:43:03] 2025-10-12 15:42:51,932 | INFO     | neventsw: 0
[2025-10-12 11:43:03] 2025-10-12 15:42:51,932 | INFO     | pid: 31810
[2025-10-12 11:43:03] 2025-10-12 15:42:51,932 | INFO     | pgrp: 31810
[2025-10-12 11:43:03] 2025-10-12 15:42:51,932 | INFO     | corecount: 4
[2025-10-12 11:43:03] 2025-10-12 15:42:51,932 | INFO     | event service: False
[2025-10-12 11:43:03] 2025-10-12 15:42:51,932 | INFO     | sizes: {0: 2348630, 1: 2348885, 4: 2349147, 11: 2349175, 5682: 2375953, 5683: 2384951, 5686: 2385135, 5690: 2385329}
[2025-10-12 11:43:03] 2025-10-12 15:42:51,932 | INFO     | --------------------------------------------------
[2025-10-12 11:43:03] 2025-10-12 15:42:51,932 | INFO     | 
[2025-10-12 11:43:03] 2025-10-12 15:42:51,932 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 11:43:03] 2025-10-12 15:42:51,950 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 11:43:03] 2025-10-12 15:42:51,951 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 11:43:03] 2025-10-12 15:42:51,951 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 11:43:03] 2025-10-12 15:42:51,951 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 11:43:03] 2025-10-12 15:42:51,951 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 11:43:03] 2025-10-12 15:42:51,951 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 11:43:03] 2025-10-12 15:42:51,951 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 11:43:03] 2025-10-12 15:42:51,951 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 11:43:03] 2025-10-12 15:42:51,952 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 11:43:03] 2025-10-12 15:42:51,952 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 11:43:03] 2025-10-12 15:42:51,952 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 11:43:03] 2025-10-12 15:42:51,952 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 11:43:03] 2025-10-12 15:42:51,952 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 11:43:03] 2025-10-12 15:42:51,952 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 11:43:03] 2025-10-12 15:42:51,952 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 11:43:03] 2025-10-12 15:42:51,953 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 11:43:03] 2025-10-12 15:42:51,953 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 11:43:03] 2025-10-12 15:42:51,953 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 11:43:03] 2025-10-12 15:42:51,953 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 11:43:03] 2025-10-12 15:42:51,953 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 11:43:03] 2025-10-12 15:42:51,953 | INFO     | job 6839988424 has completed (purged errors)
[2025-10-12 11:43:03] 2025-10-12 15:42:51,953 | INFO     | overall cleanup function is called
[2025-10-12 11:43:03] 2025-10-12 15:42:52,959 | INFO     | --- collectZombieJob: --- 10, [31810]
[2025-10-12 11:43:03] 2025-10-12 15:42:52,959 | INFO     | zombie collector waiting for pid 31810
[2025-10-12 11:43:03] 2025-10-12 15:42:52,959 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 11:43:03] 2025-10-12 15:42:52,959 | INFO     | collected zombie processes
[2025-10-12 11:43:03] 2025-10-12 15:42:52,959 | INFO     | will attempt to kill all subprocesses of pid=31810
[2025-10-12 11:43:03] 2025-10-12 15:42:52,989 | INFO     | process IDs to be killed: [31810] (in reverse order)
[2025-10-12 11:43:03] 2025-10-12 15:42:53,011 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 11:43:03] 2025-10-12 15:42:53,011 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 11:43:03] 2025-10-12 15:42:53,012 | INFO     | did not find any defunct processes belonging to 31810
[2025-10-12 11:43:03] 2025-10-12 15:42:53,013 | INFO     | did not find any defunct processes belonging to 31810
[2025-10-12 11:43:03] 2025-10-12 15:42:53,013 | INFO     | ready for new job
[2025-10-12 11:43:03] 2025-10-12 15:42:53,013 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 11:43:03] 2025-10-12 15:42:53,014 | INFO     | ***************************************
[2025-10-12 11:43:03] 2025-10-12 15:42:53,014 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 11:43:03] 2025-10-12 15:42:53,014 | INFO     | ***************************************
[2025-10-12 11:43:03] 2025-10-12 15:42:53,014 | INFO     | 
[2025-10-12 11:43:03] 2025-10-12 15:42:53,014 | INFO     | architecture information:
[2025-10-12 11:43:03] 2025-10-12 15:42:53,015 | INFO     | executing command: cat /etc/os-release
[2025-10-12 11:43:03] 2025-10-12 15:42:53,024 | INFO     | cat /etc/os-release:
[2025-10-12 11:43:03] NAME="CentOS Linux"
[2025-10-12 11:43:03] VERSION="7 (Core)"
[2025-10-12 11:43:03] ID="centos"
[2025-10-12 11:43:03] ID_LIKE="rhel fedora"
[2025-10-12 11:43:03] VERSION_ID="7"
[2025-10-12 11:43:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 11:43:03] ANSI_COLOR="0;31"
[2025-10-12 11:43:03] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 11:43:03] HOME_URL="https://www.centos.org/"
[2025-10-12 11:43:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 11:43:03] 
[2025-10-12 11:43:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 11:43:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 11:43:03] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 11:43:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 11:43:03] 
[2025-10-12 11:43:03] 2025-10-12 15:42:53,025 | INFO     | ***************************************
[2025-10-12 11:43:03] 2025-10-12 15:42:53,527 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 11:43:03] 2025-10-12 15:42:53,544 | INFO     | sufficient remaining disk space (29354885120 B)
[2025-10-12 11:43:03] 2025-10-12 15:42:53,544 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 11:43:03] 2025-10-12 15:42:53,545 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 11:43:03] 2025-10-12 15:42:53,545 | INFO     | update_server=False
[2025-10-12 11:43:03] 2025-10-12 15:42:53,545 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 11:43:03] 2025-10-12 15:42:53,545 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-10-12 11:43:03] 2025-10-12 15:42:53,546 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 11:43:03] 2025-10-12 15:42:53,546 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 11:43:03] 2025-10-12 15:42:53,546 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 11:43:03] 2025-10-12 15:42:53,849 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 11:43:03] 2025-10-12 15:42:53,946 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 11:43:03] 2025-10-12 15:42:53,946 | INFO     | aborting loop
[2025-10-12 11:43:03] 2025-10-12 15:42:54,461 | INFO     | all data control threads have been joined
[2025-10-12 11:43:03] 2025-10-12 15:42:54,550 | INFO     | [job] retrieve thread has finished
[2025-10-12 11:43:03] 2025-10-12 15:42:54,561 | INFO     | all payload control threads have been joined
[2025-10-12 11:43:03] 2025-10-12 15:42:54,569 | INFO     | all job control threads have been joined
[2025-10-12 11:43:03] 2025-10-12 15:42:54,620 | INFO     | [payload] validate_post thread has finished
[2025-10-12 11:43:03] 2025-10-12 15:42:54,691 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 11:43:03] 2025-10-12 15:42:54,951 | INFO     | [job] job monitor thread has finished
[2025-10-12 11:43:03] 2025-10-12 15:42:54,979 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 11:43:03] 2025-10-12 15:42:55,080 | INFO     | [data] copytool_in thread has finished
[2025-10-12 11:43:03] 2025-10-12 15:42:55,466 | INFO     | [data] control thread has finished
[2025-10-12 11:43:03] 2025-10-12 15:42:55,483 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 11:43:03] 2025-10-12 15:42:55,489 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 11:43:03] 2025-10-12 15:42:55,566 | INFO     | [payload] control thread has finished
[2025-10-12 11:43:03] 2025-10-12 15:42:55,574 | INFO     | [job] control thread has finished
[2025-10-12 11:43:03] 2025-10-12 15:42:55,601 | INFO     | [payload] failed_post thread has finished
[2025-10-12 11:43:03] 2025-10-12 15:42:55,857 | INFO     | [job] validate thread has finished
[2025-10-12 11:43:03] 2025-10-12 15:42:56,034 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 11:43:03] 2025-10-12 15:42:56,463 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 11:43:03] 2025-10-12 15:42:56,985 | INFO     | [data] copytool_out thread has finished
[2025-10-12 11:43:03] 2025-10-12 15:42:57,024 | INFO     | [monitor] cgroup control has ended
[2025-10-12 11:43:03] 2025-10-12 15:42:57,468 | INFO     | [job] queue monitor thread has finished
[2025-10-12 11:43:03] 2025-10-12 15:42:57,855 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 11:43:03] 2025-10-12 15:42:58,029 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140497431029568)>', '<ExcThread(monitor, started 140497121154816)>']
[2025-10-12 11:43:03] 2025-10-12 15:42:58,562 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 11:43:03] 2025-10-12 15:42:58,563 | INFO     | [monitor] control thread has ended
[2025-10-12 11:43:03] 2025-10-12 15:43:03,040 | INFO     | all workflow threads have been joined
[2025-10-12 11:43:03] 2025-10-12 15:43:03,041 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 11:43:03] 2025-10-12 15:43:03,041 | INFO     | traces error code: 0
[2025-10-12 11:43:03] 2025-10-12 15:43:03,041 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 11:43:03] 2025-10-12 15:43:03,099 [wrapper] ==== pilot stdout END ====
[2025-10-12 11:43:03] 2025-10-12 15:43:03,101 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 11:43:03] 2025-10-12 15:43:03,103 [wrapper] pilotpid: 25427
[2025-10-12 11:43:03] 2025-10-12 15:43:03,105 [wrapper] Pilot exit status: 0
[2025-10-12 11:43:03] 2025-10-12 15:43:03,111 [wrapper] pandaids: 6839988424
[2025-10-12 11:43:03] 2025-10-12 15:43:03,125 [wrapper] cleanup supervisor_pilot 30597 25428
[2025-10-12 11:43:03] 2025-10-12 15:43:03,128 [wrapper] Test setup, not cleaning
[2025-10-12 11:43:03] 2025-10-12 15:43:03,130 [wrapper] apfmon messages muted
[2025-10-12 11:43:03] 2025-10-12 15:43:03,132 [wrapper] ==== wrapper stdout END ====
[2025-10-12 11:43:03] 2025-10-12 15:43:03,134 [wrapper] ==== wrapper stderr END ====
[2025-10-12 11:43:03]  *** Error codes and diagnostics ***
[2025-10-12 11:43:03]     "exeErrorCode": 0,
[2025-10-12 11:43:03]     "exeErrorDiag": "",
[2025-10-12 11:43:03]     "pilotErrorCode": 0,
[2025-10-12 11:43:03]     "pilotErrorDiag": "",
[2025-10-12 11:43:03]  *** Listing of results directory ***
[2025-10-12 11:43:03] total 418284
[2025-10-12 11:43:03] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 08:35 pilot3.tar.gz
[2025-10-12 11:43:03] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 08:43 queuedata.json
[2025-10-12 11:43:03] -rwx------ 1 boincer umatlas     36292 Oct 12 08:43 runpilot2-wrapper.sh
[2025-10-12 11:43:03] -rw-r--r-- 1 boincer umatlas       100 Oct 12 10:07 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 11:43:03] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 10:07 run_atlas
[2025-10-12 11:43:03] -rw-r--r-- 1 boincer umatlas       105 Oct 12 10:07 job.xml
[2025-10-12 11:43:03] -rw-r--r-- 2 boincer umatlas 220777790 Oct 12 10:07 EVNT.46676267._003810.pool.root.1
[2025-10-12 11:43:03] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 10:07 start_atlas.sh
[2025-10-12 11:43:03] drwxrwx--x 2 boincer umatlas      4096 Oct 12 10:07 shared
[2025-10-12 11:43:03] -rw-r--r-- 2 boincer umatlas    569679 Oct 12 10:07 input.tar.gz
[2025-10-12 11:43:03] -rw-r--r-- 1 boincer umatlas         0 Oct 12 10:07 boinc_lockfile
[2025-10-12 11:43:03] -rw-r--r-- 1 boincer umatlas      2550 Oct 12 10:07 pandaJob.out
[2025-10-12 11:43:03] -rw------- 1 boincer umatlas    975528 Oct 12 10:07 agis_schedconf.cvmfs.json
[2025-10-12 11:43:03] -rw------- 1 boincer umatlas   1560580 Oct 12 10:07 agis_ddmendpoints.agis.ALL.json
[2025-10-12 11:43:03] drwx------ 5 boincer umatlas      4096 Oct 12 10:07 pilot3
[2025-10-12 11:43:03] -rw-r--r-- 1 boincer umatlas      6237 Oct 12 11:37 init_data.xml
[2025-10-12 11:43:03] -rw------- 1 boincer umatlas 201436007 Oct 12 11:42 HITS.46676269._078517.pool.root.1
[2025-10-12 11:43:03] -rw------- 1 boincer umatlas        95 Oct 12 11:42 pilot_heartbeat.json
[2025-10-12 11:43:03] -rw------- 1 boincer umatlas      1040 Oct 12 11:42 memory_monitor_summary.json
[2025-10-12 11:43:03] -rw------- 1 boincer umatlas    280357 Oct 12 11:42 log.46676269._078517.job.log.tgz.1
[2025-10-12 11:43:03] -rw------- 1 boincer umatlas      7823 Oct 12 11:42 heartbeat.json
[2025-10-12 11:43:03] -rw-r--r-- 1 boincer umatlas       529 Oct 12 11:42 boinc_task_state.xml
[2025-10-12 11:43:03] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 11:42 boinc_mmap_file
[2025-10-12 11:43:03] -rw-r--r-- 1 boincer umatlas        27 Oct 12 11:42 wrapper_checkpoint.txt
[2025-10-12 11:43:03] -rw------- 1 boincer umatlas      4552 Oct 12 11:43 pilotlog.txt
[2025-10-12 11:43:03] -rw------- 1 boincer umatlas    823068 Oct 12 11:43 log.46676269._078517.job.log.1
[2025-10-12 11:43:03] -rw------- 1 boincer umatlas       357 Oct 12 11:43 output.list
[2025-10-12 11:43:03] -rw-r--r-- 1 boincer umatlas       620 Oct 12 11:43 runtime_log
[2025-10-12 11:43:03] -rw------- 1 boincer umatlas   1126400 Oct 12 11:43 result.tar.gz
[2025-10-12 11:43:03] -rw-r--r-- 1 boincer umatlas      8703 Oct 12 11:43 runtime_log.err
[2025-10-12 11:43:03] -rw------- 1 boincer umatlas       656 Oct 12 11:43 CO1NDmEbAS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmvpjNDmAWl1sm.diag
[2025-10-12 11:43:03] -rw-r--r-- 1 boincer umatlas     21856 Oct 12 11:43 stderr.txt
[2025-10-12 11:43:03] HITS file was successfully produced:
[2025-10-12 11:43:03] -rw------- 1 boincer umatlas 201436007 Oct 12 11:42 shared/HITS.pool.root.1
[2025-10-12 11:43:03]  *** Contents of shared directory: ***
[2025-10-12 11:43:03] total 414000
[2025-10-12 11:43:03] -rw-r--r-- 2 boincer umatlas 220777790 Oct 12 10:07 ATLAS.root_0
[2025-10-12 11:43:03] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 10:07 start_atlas.sh
[2025-10-12 11:43:03] -rw-r--r-- 2 boincer umatlas    569679 Oct 12 10:07 input.tar.gz
[2025-10-12 11:43:03] -rw------- 1 boincer umatlas 201436007 Oct 12 11:42 HITS.pool.root.1
[2025-10-12 11:43:03] -rw------- 1 boincer umatlas   1126400 Oct 12 11:43 result.tar.gz
11:43:04 (21771): run_atlas exited; CPU time 21974.835962
11:43:04 (21771): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN