Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
10:06:36 (10348): wrapper (7.7.26015): starting
10:06:36 (10348): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 10:06:36] Arguments: --nthreads 8
[2025-10-12 10:06:36] Threads: 8
[2025-10-12 10:06:36] Checking for CVMFS
[2025-10-12 10:06:37] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 10:06:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 10:06:37] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 10:06:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 10:06:37] 2.11.2.0 2756 8599 79080 151622 1 56 14640987 20275200 1 130560 0 5847931 99.990 286950 38703 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 10:06:37] CVMFS is ok
[2025-10-12 10:06:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 10:06:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 10:06:37] Further information can be found at the LHC@home message board.
[2025-10-12 10:06:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 10:06:37] Checking for apptainer binary...
[2025-10-12 10:06:37] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 10:06:37] Running /usr/bin/apptainer --version
[2025-10-12 10:06:37] apptainer version 1.3.2-1.el7
[2025-10-12 10:06:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 10:06:39] c-115-14.aglt2.org
[2025-10-12 10:06:39] apptainer works
[2025-10-12 10:06:39] Set ATHENA_PROC_NUMBER=8
[2025-10-12 10:06:39] Set ATHENA_CORE_NUMBER=8
[2025-10-12 10:06:39] Starting ATLAS job with PandaID=6839988412
[2025-10-12 10:06:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 12:00:12]  *** The last 200 lines of the pilot log: ***
[2025-10-12 12:00:12] 2025-10-12 15:59:22,373 | INFO     | mean y: 2518292.29
[2025-10-12 12:00:12] 2025-10-12 15:59:22,373 | INFO     | -- intersect: -14497867650.603737
[2025-10-12 12:00:12] 2025-10-12 15:59:22,373 | INFO     | intersect: -14497867650.603737
[2025-10-12 12:00:12] 2025-10-12 15:59:22,373 | INFO     | chi2: 0.0010235967134581345
[2025-10-12 12:00:12] 2025-10-12 15:59:22,373 | INFO     | current chi2=0.0010235967134581345 (change=97.04189957717018 %)
[2025-10-12 12:00:12] 2025-10-12 15:59:22,374 | INFO     | sum of square deviations: 265828240.0
[2025-10-12 12:00:12] 2025-10-12 15:59:22,374 | INFO     | sum of deviations: 1863939057.9999998
[2025-10-12 12:00:12] 2025-10-12 15:59:22,374 | INFO     | mean x: 1760281827.0
[2025-10-12 12:00:12] 2025-10-12 15:59:22,374 | INFO     | mean y: 2520666.8421052634
[2025-10-12 12:00:12] 2025-10-12 15:59:22,374 | INFO     | -- intersect: -12340253939.922392
[2025-10-12 12:00:12] 2025-10-12 15:59:22,374 | INFO     | intersect: -12340253939.922392
[2025-10-12 12:00:12] 2025-10-12 15:59:22,375 | INFO     | chi2: 0.0005643050000611745
[2025-10-12 12:00:12] 2025-10-12 15:59:22,375 | INFO     | current chi2=0.0005643050000611745 (change=44.87037788987052 %)
[2025-10-12 12:00:12] 2025-10-12 15:59:22,375 | INFO     | sum of square deviations: 226022842.5
[2025-10-12 12:00:12] 2025-10-12 15:59:22,376 | INFO     | sum of deviations: 1333796323.5
[2025-10-12 12:00:12] 2025-10-12 15:59:22,376 | INFO     | mean x: 1760281979.5
[2025-10-12 12:00:12] 2025-10-12 15:59:22,376 | INFO     | mean y: 2522696.6555555556
[2025-10-12 12:00:12] 2025-10-12 15:59:22,376 | INFO     | -- intersect: -10385177973.821598
[2025-10-12 12:00:12] 2025-10-12 15:59:22,376 | INFO     | intersect: -10385177973.821598
[2025-10-12 12:00:12] 2025-10-12 15:59:22,376 | INFO     | chi2: 0.0002677199563346393
[2025-10-12 12:00:12] 2025-10-12 15:59:22,376 | INFO     | current chi2=0.0002677199563346393 (change=52.557578560243726 %)
[2025-10-12 12:00:12] 2025-10-12 15:59:22,377 | INFO     | sum of square deviations: 190403570.0
[2025-10-12 12:00:12] 2025-10-12 15:59:22,377 | INFO     | sum of deviations: 999804213.0
[2025-10-12 12:00:12] 2025-10-12 15:59:22,377 | INFO     | mean x: 1760282132.0
[2025-10-12 12:00:12] 2025-10-12 15:59:22,377 | INFO     | mean y: 2524119.5764705883
[2025-10-12 12:00:12] 2025-10-12 15:59:22,377 | INFO     | -- intersect: -9240671749.29417
[2025-10-12 12:00:12] 2025-10-12 15:59:22,378 | INFO     | intersect: -9240671749.29417
[2025-10-12 12:00:12] 2025-10-12 15:59:22,378 | INFO     | chi2: 0.00016418024344088251
[2025-10-12 12:00:12] 2025-10-12 15:59:22,378 | INFO     | current chi2=0.00016418024344088251 (change=38.67463386417718 %)
[2025-10-12 12:00:12] 2025-10-12 15:59:22,378 | INFO     | sum of square deviations: 158737860.0
[2025-10-12 12:00:12] 2025-10-12 15:59:22,379 | INFO     | sum of deviations: 736981046.5
[2025-10-12 12:00:12] 2025-10-12 15:59:22,379 | INFO     | mean x: 1760282284.5
[2025-10-12 12:00:12] 2025-10-12 15:59:22,379 | INFO     | mean y: 2525384.4625
[2025-10-12 12:00:12] 2025-10-12 15:59:22,379 | INFO     | -- intersect: -8170034584.320126
[2025-10-12 12:00:12] 2025-10-12 15:59:22,379 | INFO     | intersect: -8170034584.320126
[2025-10-12 12:00:12] 2025-10-12 15:59:22,379 | INFO     | chi2: 0.00010790724716265239
[2025-10-12 12:00:12] 2025-10-12 15:59:22,379 | INFO     | current chi2=0.00010790724716265239 (change=34.275132682753465 %)
[2025-10-12 12:00:12] 2025-10-12 15:59:22,380 | INFO     | sum of square deviations: 130793150.0
[2025-10-12 12:00:12] 2025-10-12 15:59:22,380 | INFO     | sum of deviations: 563503116.0
[2025-10-12 12:00:12] 2025-10-12 15:59:22,380 | INFO     | mean x: 1760282437.0
[2025-10-12 12:00:12] 2025-10-12 15:59:22,380 | INFO     | mean y: 2526326.8
[2025-10-12 12:00:12] 2025-10-12 15:59:22,380 | INFO     | -- intersect: -7581392542.724694
[2025-10-12 12:00:12] 2025-10-12 15:59:22,380 | INFO     | intersect: -7581392542.724694
[2025-10-12 12:00:12] 2025-10-12 15:59:22,381 | INFO     | chi2: 9.103809025323948e-05
[2025-10-12 12:00:12] 2025-10-12 15:59:22,381 | INFO     | current chi2=9.103809025323948e-05 (change=15.633015717642607 %)
[2025-10-12 12:00:12] 2025-10-12 15:59:22,381 | INFO     | left removable region: 70
[2025-10-12 12:00:12] 2025-10-12 15:59:22,381 | INFO     | sum of square deviations: 12176972.5
[2025-10-12 12:00:12] 2025-10-12 15:59:22,381 | INFO     | sum of deviations: 4296565.5
[2025-10-12 12:00:12] 2025-10-12 15:59:22,381 | INFO     | mean x: 1760283321.5
[2025-10-12 12:00:12] 2025-10-12 15:59:22,382 | INFO     | mean y: 2531351.8529411764
[2025-10-12 12:00:12] 2025-10-12 15:59:22,382 | INFO     | -- intersect: -618573162.3752308
[2025-10-12 12:00:12] 2025-10-12 15:59:22,382 | INFO     | intersect: -618573162.3752308
[2025-10-12 12:00:12] 2025-10-12 15:59:22,382 | INFO     | chi2: 3.3785594311118084e-07
[2025-10-12 12:00:12] 2025-10-12 15:59:22,382 | INFO     | -- intersect: -618573162.3752308
[2025-10-12 12:00:12] 2025-10-12 15:59:22,382 | INFO     | current memory leak: 0.35 B/s (using 34 data points, chi2=0.00)
[2025-10-12 12:00:12] 2025-10-12 15:59:22,383 | INFO     | could have reported an average CPU frequency of 2080 MHz (7 samples)
[2025-10-12 12:00:12] 2025-10-12 15:59:22,383 | INFO     | ..............................
[2025-10-12 12:00:12] 2025-10-12 15:59:22,383 | INFO     | . Timing measurements:
[2025-10-12 12:00:12] 2025-10-12 15:59:22,383 | INFO     | . get job = 0 s
[2025-10-12 12:00:12] 2025-10-12 15:59:22,383 | INFO     | . initial setup = 2 s
[2025-10-12 12:00:12] 2025-10-12 15:59:22,383 | INFO     | . payload setup = 7 s
[2025-10-12 12:00:12] 2025-10-12 15:59:22,383 | INFO     | . stage-in = 0 s
[2025-10-12 12:00:12] 2025-10-12 15:59:22,383 | INFO     | . payload execution = 6710 s
[2025-10-12 12:00:12] 2025-10-12 15:59:22,383 | INFO     | . stage-out = 0 s
[2025-10-12 12:00:12] 2025-10-12 15:59:22,384 | INFO     | . log creation = 0 s
[2025-10-12 12:00:12] 2025-10-12 15:59:22,384 | INFO     | ..............................
[2025-10-12 12:00:12] 2025-10-12 15:59:22,470 | INFO     | 
[2025-10-12 12:00:12] 2025-10-12 15:59:22,470 | INFO     | job summary report
[2025-10-12 12:00:12] 2025-10-12 15:59:22,470 | INFO     | --------------------------------------------------
[2025-10-12 12:00:12] 2025-10-12 15:59:22,470 | INFO     | PanDA job id: 6839988412
[2025-10-12 12:00:12] 2025-10-12 15:59:22,470 | INFO     | task id: 46676269
[2025-10-12 12:00:12] 2025-10-12 15:59:22,471 | INFO     | errors: (none)
[2025-10-12 12:00:12] 2025-10-12 15:59:22,471 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 12:00:12] 2025-10-12 15:59:22,471 | INFO     | pilot state: finished 
[2025-10-12 12:00:12] 2025-10-12 15:59:22,471 | INFO     | transexitcode: 0
[2025-10-12 12:00:12] 2025-10-12 15:59:22,471 | INFO     | exeerrorcode: 0
[2025-10-12 12:00:12] 2025-10-12 15:59:22,471 | INFO     | exeerrordiag: 
[2025-10-12 12:00:12] 2025-10-12 15:59:22,472 | INFO     | exitcode: 0
[2025-10-12 12:00:12] 2025-10-12 15:59:22,472 | INFO     | exitmsg: OK
[2025-10-12 12:00:12] 2025-10-12 15:59:22,472 | INFO     | cpuconsumptiontime: 50151 s
[2025-10-12 12:00:12] 2025-10-12 15:59:22,472 | INFO     | nevents: 400
[2025-10-12 12:00:12] 2025-10-12 15:59:22,472 | INFO     | neventsw: 0
[2025-10-12 12:00:12] 2025-10-12 15:59:22,472 | INFO     | pid: 21519
[2025-10-12 12:00:12] 2025-10-12 15:59:22,473 | INFO     | pgrp: 21519
[2025-10-12 12:00:12] 2025-10-12 15:59:22,473 | INFO     | corecount: 8
[2025-10-12 12:00:12] 2025-10-12 15:59:22,473 | INFO     | event service: False
[2025-10-12 12:00:12] 2025-10-12 15:59:22,473 | INFO     | sizes: {0: 2348857, 1: 2348857, 6: 2349147, 11: 2349175, 6721: 2376313, 6723: 2385495, 6730: 2385633}
[2025-10-12 12:00:12] 2025-10-12 15:59:22,473 | INFO     | --------------------------------------------------
[2025-10-12 12:00:12] 2025-10-12 15:59:22,473 | INFO     | 
[2025-10-12 12:00:12] 2025-10-12 15:59:22,474 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 12:00:12] 2025-10-12 15:59:22,502 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 12:00:12] 2025-10-12 15:59:22,503 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 12:00:12] 2025-10-12 15:59:22,503 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 12:00:12] 2025-10-12 15:59:22,503 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 12:00:12] 2025-10-12 15:59:22,503 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 12:00:12] 2025-10-12 15:59:22,503 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 12:00:12] 2025-10-12 15:59:22,504 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 12:00:12] 2025-10-12 15:59:22,504 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 12:00:12] 2025-10-12 15:59:22,504 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 12:00:12] 2025-10-12 15:59:22,504 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 12:00:12] 2025-10-12 15:59:22,504 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 12:00:12] 2025-10-12 15:59:22,504 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 12:00:12] 2025-10-12 15:59:22,505 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 12:00:12] 2025-10-12 15:59:22,505 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 12:00:12] 2025-10-12 15:59:22,505 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 12:00:12] 2025-10-12 15:59:22,505 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 12:00:12] 2025-10-12 15:59:22,505 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 12:00:12] 2025-10-12 15:59:22,505 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 12:00:12] 2025-10-12 15:59:22,506 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 12:00:12] 2025-10-12 15:59:22,506 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 12:00:12] 2025-10-12 15:59:22,506 | INFO     | job 6839988412 has completed (purged errors)
[2025-10-12 12:00:12] 2025-10-12 15:59:22,506 | INFO     | overall cleanup function is called
[2025-10-12 12:00:12] 2025-10-12 15:59:23,515 | INFO     | --- collectZombieJob: --- 10, [21519]
[2025-10-12 12:00:12] 2025-10-12 15:59:23,515 | INFO     | zombie collector waiting for pid 21519
[2025-10-12 12:00:12] 2025-10-12 15:59:23,515 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 12:00:12] 2025-10-12 15:59:23,515 | INFO     | collected zombie processes
[2025-10-12 12:00:12] 2025-10-12 15:59:23,515 | INFO     | will attempt to kill all subprocesses of pid=21519
[2025-10-12 12:00:12] 2025-10-12 15:59:23,599 | INFO     | process IDs to be killed: [21519] (in reverse order)
[2025-10-12 12:00:12] 2025-10-12 15:59:23,654 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 12:00:12] 2025-10-12 15:59:23,655 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 12:00:12] 2025-10-12 15:59:23,659 | INFO     | did not find any defunct processes belonging to 21519
[2025-10-12 12:00:12] 2025-10-12 15:59:23,662 | INFO     | did not find any defunct processes belonging to 21519
[2025-10-12 12:00:12] 2025-10-12 15:59:23,662 | INFO     | ready for new job
[2025-10-12 12:00:12] 2025-10-12 15:59:23,662 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 12:00:12] 2025-10-12 15:59:23,664 | INFO     | ***************************************
[2025-10-12 12:00:12] 2025-10-12 15:59:23,664 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 12:00:12] 2025-10-12 15:59:23,664 | INFO     | ***************************************
[2025-10-12 12:00:12] 2025-10-12 15:59:23,664 | INFO     | 
[2025-10-12 12:00:12] 2025-10-12 15:59:23,665 | INFO     | architecture information:
[2025-10-12 12:00:12] 2025-10-12 15:59:23,665 | INFO     | executing command: cat /etc/os-release
[2025-10-12 12:00:12] 2025-10-12 15:59:23,683 | INFO     | cat /etc/os-release:
[2025-10-12 12:00:12] NAME="CentOS Linux"
[2025-10-12 12:00:12] VERSION="7 (Core)"
[2025-10-12 12:00:12] ID="centos"
[2025-10-12 12:00:12] ID_LIKE="rhel fedora"
[2025-10-12 12:00:12] VERSION_ID="7"
[2025-10-12 12:00:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 12:00:12] ANSI_COLOR="0;31"
[2025-10-12 12:00:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 12:00:12] HOME_URL="https://www.centos.org/"
[2025-10-12 12:00:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 12:00:12] 
[2025-10-12 12:00:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 12:00:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 12:00:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 12:00:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 12:00:12] 
[2025-10-12 12:00:12] 2025-10-12 15:59:23,683 | INFO     | ***************************************
[2025-10-12 12:00:12] 2025-10-12 15:59:24,186 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 12:00:12] 2025-10-12 15:59:24,206 | INFO     | sufficient remaining disk space (18586009600 B)
[2025-10-12 12:00:12] 2025-10-12 15:59:24,207 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 12:00:12] 2025-10-12 15:59:24,207 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 12:00:12] 2025-10-12 15:59:24,207 | INFO     | update_server=False
[2025-10-12 12:00:12] 2025-10-12 15:59:24,207 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 12:00:12] 2025-10-12 15:59:24,208 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 12:00:12] 2025-10-12 15:59:24,208 | INFO     | aborting loop
[2025-10-12 12:00:12] 2025-10-12 15:59:24,209 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 12:00:12] 2025-10-12 15:59:24,209 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 12:00:12] 2025-10-12 15:59:24,488 | INFO     | all job control threads have been joined
[2025-10-12 12:00:12] 2025-10-12 15:59:24,732 | INFO     | all data control threads have been joined
[2025-10-12 12:00:12] 2025-10-12 15:59:24,743 | INFO     | all payload control threads have been joined
[2025-10-12 12:00:12] 2025-10-12 15:59:25,209 | INFO     | [job] job monitor thread has finished
[2025-10-12 12:00:12] 2025-10-12 15:59:25,212 | INFO     | [job] retrieve thread has finished
[2025-10-12 12:00:12] 2025-10-12 15:59:25,214 | INFO     | [job] queue monitor thread has finished
[2025-10-12 12:00:12] 2025-10-12 15:59:25,494 | INFO     | [job] control thread has finished
[2025-10-12 12:00:12] 2025-10-12 15:59:25,662 | INFO     | [payload] failed_post thread has finished
[2025-10-12 12:00:12] 2025-10-12 15:59:25,728 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 12:00:12] 2025-10-12 15:59:25,736 | INFO     | [data] control thread has finished
[2025-10-12 12:00:12] 2025-10-12 15:59:25,749 | INFO     | [payload] control thread has finished
[2025-10-12 12:00:12] 2025-10-12 15:59:25,846 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 12:00:12] 2025-10-12 15:59:26,039 | INFO     | [data] copytool_in thread has finished
[2025-10-12 12:00:12] 2025-10-12 15:59:26,215 | INFO     | [data] copytool_out thread has finished
[2025-10-12 12:00:12] 2025-10-12 15:59:26,503 | INFO     | [payload] validate_post thread has finished
[2025-10-12 12:00:12] 2025-10-12 15:59:26,504 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 12:00:12] 2025-10-12 15:59:26,510 | INFO     | [job] validate thread has finished
[2025-10-12 12:00:12] 2025-10-12 15:59:26,584 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 12:00:12] 2025-10-12 15:59:26,748 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 12:00:12] 2025-10-12 15:59:30,754 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 12:00:12] 2025-10-12 15:59:54,556 | INFO     | PID=14120 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 12:00:12] 2025-10-12 15:59:54,557 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 12:00:12] 2025-10-12 15:59:54,557 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 12:00:12] 2025-10-12 15:59:54,557 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 12:00:12] 2025-10-12 16:00:06,131 | INFO     | [monitor] cgroup control has ended
[2025-10-12 12:00:12] 2025-10-12 16:00:06,693 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140471019718464)>', '<ExcThread(monitor, started 140469916919552)>']
[2025-10-12 12:00:12] 2025-10-12 16:00:07,609 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 12:00:12] 2025-10-12 16:00:07,609 | INFO     | [monitor] control thread has ended
[2025-10-12 12:00:12] 2025-10-12 16:00:11,718 | INFO     | all workflow threads have been joined
[2025-10-12 12:00:12] 2025-10-12 16:00:11,718 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 12:00:12] 2025-10-12 16:00:11,719 | INFO     | traces error code: 0
[2025-10-12 12:00:12] 2025-10-12 16:00:11,719 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 12:00:12] 2025-10-12 16:00:11,834 [wrapper] ==== pilot stdout END ====
[2025-10-12 12:00:12] 2025-10-12 16:00:11,838 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 12:00:12] 2025-10-12 16:00:11,842 [wrapper] pilotpid: 14120
[2025-10-12 12:00:12] 2025-10-12 16:00:11,846 [wrapper] Pilot exit status: 0
[2025-10-12 12:00:12] 2025-10-12 16:00:11,865 [wrapper] pandaids: 6839988412
[2025-10-12 12:00:12] 2025-10-12 16:00:11,916 [wrapper] cleanup supervisor_pilot 25424 14121
[2025-10-12 12:00:12] 2025-10-12 16:00:11,921 [wrapper] Test setup, not cleaning
[2025-10-12 12:00:12] 2025-10-12 16:00:11,925 [wrapper] apfmon messages muted
[2025-10-12 12:00:12] 2025-10-12 16:00:11,930 [wrapper] ==== wrapper stdout END ====
[2025-10-12 12:00:12] 2025-10-12 16:00:11,934 [wrapper] ==== wrapper stderr END ====
[2025-10-12 12:00:12]  *** Error codes and diagnostics ***
[2025-10-12 12:00:12]     "exeErrorCode": 0,
[2025-10-12 12:00:12]     "exeErrorDiag": "",
[2025-10-12 12:00:12]     "pilotErrorCode": 0,
[2025-10-12 12:00:12]     "pilotErrorDiag": "",
[2025-10-12 12:00:12]  *** Listing of results directory ***
[2025-10-12 12:00:12] total 413488
[2025-10-12 12:00:12] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 08:35 pilot3.tar.gz
[2025-10-12 12:00:12] -rwx------ 1 boincer umatlas     36292 Oct 12 08:43 runpilot2-wrapper.sh
[2025-10-12 12:00:12] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 08:43 queuedata.json
[2025-10-12 12:00:12] -rw-r--r-- 1 boincer umatlas       100 Oct 12 10:06 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 12:00:12] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 10:06 run_atlas
[2025-10-12 12:00:12] -rw-r--r-- 1 boincer umatlas       105 Oct 12 10:06 job.xml
[2025-10-12 12:00:12] -rw-r--r-- 2 boincer umatlas 222903735 Oct 12 10:06 EVNT.46676267._003809.pool.root.1
[2025-10-12 12:00:12] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 10:06 start_atlas.sh
[2025-10-12 12:00:12] drwxrwx--x 2 boincer umatlas      4096 Oct 12 10:06 shared
[2025-10-12 12:00:12] -rw-r--r-- 2 boincer umatlas    569680 Oct 12 10:06 input.tar.gz
[2025-10-12 12:00:12] -rw-r--r-- 1 boincer umatlas         0 Oct 12 10:06 boinc_lockfile
[2025-10-12 12:00:12] -rw-r--r-- 1 boincer umatlas      2550 Oct 12 10:06 pandaJob.out
[2025-10-12 12:00:12] -rw------- 1 boincer umatlas    975528 Oct 12 10:06 agis_schedconf.cvmfs.json
[2025-10-12 12:00:12] -rw------- 1 boincer umatlas   1560580 Oct 12 10:06 agis_ddmendpoints.agis.ALL.json
[2025-10-12 12:00:12] drwx------ 5 boincer umatlas      4096 Oct 12 10:06 pilot3
[2025-10-12 12:00:12] -rw-r--r-- 1 boincer umatlas      5910 Oct 12 11:55 init_data.xml
[2025-10-12 12:00:12] -rw------- 1 boincer umatlas 193950408 Oct 12 11:58 HITS.46676269._078505.pool.root.1
[2025-10-12 12:00:12] -rw-r--r-- 1 boincer umatlas       530 Oct 12 11:58 boinc_task_state.xml
[2025-10-12 12:00:12] -rw------- 1 boincer umatlas      1063 Oct 12 11:59 memory_monitor_summary.json
[2025-10-12 12:00:12] -rw------- 1 boincer umatlas    370082 Oct 12 11:59 log.46676269._078505.job.log.tgz.1
[2025-10-12 12:00:12] -rw------- 1 boincer umatlas      7844 Oct 12 11:59 heartbeat.json
[2025-10-12 12:00:12] -rw------- 1 boincer umatlas        95 Oct 12 11:59 pilot_heartbeat.json
[2025-10-12 12:00:12] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 12:00 boinc_mmap_file
[2025-10-12 12:00:12] -rw-r--r-- 1 boincer umatlas        27 Oct 12 12:00 wrapper_checkpoint.txt
[2025-10-12 12:00:12] -rw------- 1 boincer umatlas      4746 Oct 12 12:00 pilotlog.txt
[2025-10-12 12:00:12] -rw------- 1 boincer umatlas    957843 Oct 12 12:00 log.46676269._078505.job.log.1
[2025-10-12 12:00:12] -rw------- 1 boincer umatlas       357 Oct 12 12:00 output.list
[2025-10-12 12:00:12] -rw-r--r-- 1 boincer umatlas       620 Oct 12 12:00 runtime_log
[2025-10-12 12:00:12] -rw------- 1 boincer umatlas   1351680 Oct 12 12:00 result.tar.gz
[2025-10-12 12:00:12] -rw------- 1 boincer umatlas       659 Oct 12 12:00 xObNDmCbAS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmSuTMDmj9mJhn.diag
[2025-10-12 12:00:12] -rw-r--r-- 1 boincer umatlas      8703 Oct 12 12:00 runtime_log.err
[2025-10-12 12:00:12] -rw-r--r-- 1 boincer umatlas     20865 Oct 12 12:00 stderr.txt
[2025-10-12 12:00:12] HITS file was successfully produced:
[2025-10-12 12:00:12] -rw------- 1 boincer umatlas 193950408 Oct 12 11:58 shared/HITS.pool.root.1
[2025-10-12 12:00:12]  *** Contents of shared directory: ***
[2025-10-12 12:00:12] total 408984
[2025-10-12 12:00:12] -rw-r--r-- 2 boincer umatlas 222903735 Oct 12 10:06 ATLAS.root_0
[2025-10-12 12:00:12] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 10:06 start_atlas.sh
[2025-10-12 12:00:12] -rw-r--r-- 2 boincer umatlas    569680 Oct 12 10:06 input.tar.gz
[2025-10-12 12:00:12] -rw------- 1 boincer umatlas 193950408 Oct 12 11:58 HITS.pool.root.1
[2025-10-12 12:00:12] -rw------- 1 boincer umatlas   1351680 Oct 12 12:00 result.tar.gz
12:00:13 (10348): run_atlas exited; CPU time 50164.796522
12:00:13 (10348): called boinc_finish(0)

</stderr_txt>
]]>

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