Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
2025-10-12 10:09:41 (21180): vboxwrapper version 26210
2025-10-12 10:09:41 (21180): BOINC client version: 7.24.1
2025-10-12 10:09:42 (21180): Detected: VirtualBox VboxManage Interface (Version: 7.1.6)
2025-10-12 10:09:43 (21180): Successfully copied 'init_data.xml' to the shared directory.
2025-10-12 10:09:43 (21180): Create VM. (boinc_519b1b8be9bb7d79, slot#1)
2025-10-12 10:09:44 (21180): Setting Memory Size for VM. (4600MB)
2025-10-12 10:09:44 (21180): Setting CPU Count for VM. (6)
2025-10-12 10:09:44 (21180): Setting Chipset Options for VM.
2025-10-12 10:09:44 (21180): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-10-12 10:09:45 (21180): Setting Boot Options for VM.
2025-10-12 10:09:45 (21180): Setting Network Configuration for NAT. (Driver: virtio)
2025-10-12 10:09:45 (21180): Enabling VM Network Access.
2025-10-12 10:09:46 (21180): Disabling USB Support for VM.
2025-10-12 10:09:46 (21180): Disabling COM Port Support for VM.
2025-10-12 10:09:46 (21180): Disabling LPT Port Support for VM.
2025-10-12 10:09:47 (21180): Disabling Audio Support for VM.
2025-10-12 10:09:47 (21180): Disabling Clipboard Support for VM.
2025-10-12 10:09:47 (21180): Disabling Drag and Drop Support for VM.
2025-10-12 10:09:47 (21180): Adding storage controller(s) to VM.
2025-10-12 10:09:48 (21180): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-10-12 10:09:50 (21180): Adding VirtualBox Guest Additions to VM.
2025-10-12 10:09:50 (21180): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-10-12 10:09:50 (21180): forwarding host port 49433 to guest port 80
2025-10-12 10:09:51 (21180): Enabling remote desktop for VM.
2025-10-12 10:09:51 (21180): Enabling shared directory for VM.
2025-10-12 10:09:52 (21180): Starting VM using VBoxManage interface. (boinc_519b1b8be9bb7d79, slot#1)
2025-10-12 10:09:58 (21180): Successfully started VM. (PID = '25440')
2025-10-12 10:09:58 (21180): Reporting VM Process ID to BOINC.
2025-10-12 10:09:58 (21180): Guest Log: BIOS: VirtualBox 7.1.6
2025-10-12 10:09:58 (21180): Guest Log: CPUID EDX: 0x178bfbff
2025-10-12 10:09:58 (21180): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-10-12 10:09:58 (21180): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-10-12 10:09:58 (21180): VM state change detected. (old = 'poweredoff', new = 'running')
2025-10-12 10:09:58 (21180): Detected: Web Application Enabled (http://localhost:49433)
2025-10-12 10:09:58 (21180): Detected: Remote Desktop Enabled (localhost:49434)
2025-10-12 10:09:58 (21180): Preference change detected
2025-10-12 10:09:58 (21180): Setting CPU throttle for VM. (90%)
2025-10-12 10:09:58 (21180): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-10-12 10:10:00 (21180): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-10-12 10:10:00 (21180): Guest Log: BIOS: Booting from Hard Disk...
2025-10-12 10:10:03 (21180): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-10-12 10:10:03 (21180): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-10-12 10:10:03 (21180): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-10-12 10:10:03 (21180): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-10-12 10:10:03 (21180): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-10-12 10:10:03 (21180): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-10-12 10:10:03 (21180): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-10-12 10:10:03 (21180): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-10-12 10:10:03 (21180): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-10-12 10:10:03 (21180): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-10-12 10:10:03 (21180): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-10-12 10:10:03 (21180): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-10-12 10:10:03 (21180): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-10-12 10:10:03 (21180): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-10-12 10:10:03 (21180): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-10-12 10:10:03 (21180): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-10-12 10:10:03 (21180): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-10-12 10:10:03 (21180): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-10-12 10:10:03 (21180): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-10-12 10:10:03 (21180): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-10-12 10:10:03 (21180): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-10-12 10:10:03 (21180): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-10-12 10:10:03 (21180): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-10-12 10:10:03 (21180): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-10-12 10:10:03 (21180): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-10-12 10:10:03 (21180): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-10-12 10:10:03 (21180): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-10-12 10:10:03 (21180): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-10-12 10:10:03 (21180): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-10-12 10:10:03 (21180): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-10-12 10:10:03 (21180): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-10-12 10:10:03 (21180): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-10-12 10:10:10 (21180): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-10-12 10:10:10 (21180): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-10-12 10:10:15 (21180): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-10-12 10:10:15 (21180): Guest Log: 00:00:00.000148 main     Log opened 2025-10-12T10:10:13.537247000Z
2025-10-12 10:10:15 (21180): Guest Log: 00:00:00.000280 main     OS Product: Linux
2025-10-12 10:10:15 (21180): Guest Log: 00:00:00.000322 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-10-12 10:10:15 (21180): Guest Log: 00:00:00.000351 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-10-12 10:10:15 (21180): Guest Log: 00:00:00.000379 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-10-12 10:10:15 (21180): Guest Log: 00:00:00.000380 main     Process ID: 1342
2025-10-12 10:10:15 (21180): Guest Log: 00:00:00.000380 main     Package type: LINUX_64BITS_GENERIC
2025-10-12 10:10:15 (21180): Guest Log: 00:00:00.000961 main     5.2.32 r132073 started. Verbose level = 0
2025-10-12 10:10:15 (21180): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-10-12 10:10:15 (21180): Guest Log: [INFO] Mounting shared directory
2025-10-12 10:10:15 (21180): Guest Log: [INFO] Checking for init_data.xml
2025-10-12 10:10:19 (21180): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-10-12 10:10:19 (21180): Guest Log: [INFO] Detected branch: prod
2025-10-12 10:10:19 (21180): Guest Log: This is the prod version of the ATLAS job wrapper
2025-10-12 10:10:19 (21180): Guest Log: Copying input files
2025-10-12 10:10:23 (21180): Guest Log: Copied input files into RunAtlas.
2025-10-12 10:10:23 (21180): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-10-12 10:10:23 (21180): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-10-12 10:10:23 (21180): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-10-12 10:10:23 (21180): Guest Log: Further information can be found at the LHC@home message board.
2025-10-12 10:10:25 (21180): Guest Log: 00:00:10.337247 timesync vgsvcTimeSyncWorker: Radical guest time change: 14 411 692 795 000ns (GuestNow=1 760 278 225 231 918 000 ns GuestLast=1 760 263 813 539 123 000 ns fSetTimeLastLoop=true )
2025-10-12 10:10:32 (21180): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-10-12 10:10:32 (21180): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-10-12 10:10:33 (21180): Guest Log: 2.6.3.0 1621 0 30172 151622 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1ihep-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-10-12 10:10:33 (21180): Guest Log: copied the webapp to /var/www
2025-10-12 10:10:33 (21180): Guest Log: ATHENA_PROC_NUMBER=6
2025-10-12 10:10:33 (21180): Guest Log: ATHENA_CORE_NUMBER=6
2025-10-12 10:10:33 (21180): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-10-12 10:10:33 (21180): Guest Log:  *** Starting ATLAS job. (PandaID=6839866038 taskID=46676269) ***
2025-10-12 12:32:10 (21180): Status Report: Elapsed Time: '6000.000000'
2025-10-12 12:32:10 (21180): Status Report: CPU Time: '21861.625000'
2025-10-12 13:39:28 (21180): Guest Log:  *** Job finished ***
2025-10-12 13:39:28 (21180): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-10-12 13:39:28 (21180): Guest Log: 2025-10-12 17:38:49,692 | INFO     | [data] copytool_out thread has finished
2025-10-12 13:39:28 (21180): Guest Log: 2025-10-12 17:38:53,791 | INFO     | [data] queue_monitor thread has finished
2025-10-12 13:39:28 (21180): Guest Log: 2025-10-12 17:39:18,956 | INFO     | [monitor] cgroup control has ended
2025-10-12 13:39:28 (21180): Guest Log: 2025-10-12 17:39:19,165 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140714765510464)>', '<ExcThread(monitor, started 140714184791808)>']
2025-10-12 13:39:28 (21180): Guest Log: 2025-10-12 17:39:19,958 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-10-12 13:39:28 (21180): Guest Log: 2025-10-12 17:39:19,958 | INFO     | [monitor] control thread has ended
2025-10-12 13:39:28 (21180): Guest Log: 2025-10-12 17:39:24,736 | INFO     | all workflow threads have been joined
2025-10-12 13:39:28 (21180): Guest Log: 2025-10-12 17:39:24,736 | INFO     | end of generic workflow (traces error code: 0)
2025-10-12 13:39:28 (21180): Guest Log: 2025-10-12 17:39:24,737 | INFO     | traces error code: 0
2025-10-12 13:39:28 (21180): Guest Log: 2025-10-12 17:39:24,737 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-10-12 13:39:28 (21180): Guest Log: 2025-10-12 17:39:24,800 [wrapper] ==== pilot stdout END ====
2025-10-12 13:39:28 (21180): Guest Log: 2025-10-12 17:39:24,804 [wrapper] ==== wrapper stdout RESUME ====
2025-10-12 13:39:28 (21180): Guest Log: 2025-10-12 17:39:24,809 [wrapper] pilotpid: 6041
2025-10-12 13:39:28 (21180): Guest Log: 2025-10-12 17:39:24,813 [wrapper] Pilot exit status: 0
2025-10-12 13:39:28 (21180): Guest Log: 2025-10-12 17:39:25,870 [wrapper] pandaids: 6839866038
2025-10-12 13:39:28 (21180): Guest Log: 2025-10-12 17:39:25,906 [wrapper] cleanup supervisor_pilot  8854 6042
2025-10-12 13:39:28 (21180): Guest Log: 2025-10-12 17:39:25,914 [wrapper] Test setup, not cleaning
2025-10-12 13:39:28 (21180): Guest Log: 2025-10-12 17:39:25,919 [wrapper] apfmon messages muted
2025-10-12 13:39:28 (21180): Guest Log: 2025-10-12 17:39:25,924 [wrapper] ==== wrapper stdout END ====
2025-10-12 13:39:28 (21180): Guest Log: 2025-10-12 17:39:25,929 [wrapper] ==== wrapper stderr END ====
2025-10-12 13:39:28 (21180): Guest Log:  *** Error codes and diagnostics ***
2025-10-12 13:39:28 (21180): Guest Log:     "exeErrorCode": 0,
2025-10-12 13:39:28 (21180): Guest Log:     "exeErrorDiag": "",
2025-10-12 13:39:28 (21180): Guest Log:     "pilotErrorCode": 0,
2025-10-12 13:39:28 (21180): Guest Log:     "pilotErrorDiag": "",
2025-10-12 13:39:28 (21180): Guest Log:  *** Listing of results directory ***
2025-10-12 13:39:28 (21180): Guest Log: total 197812
2025-10-12 13:39:28 (21180): Guest Log: -rw-r--r--. 1 atlas atlas    557409 Oct 12 09:51 pilot3.tar.gz
2025-10-12 13:39:28 (21180): Guest Log: -rwx------. 1 atlas atlas     36292 Oct 12 10:08 runpilot2-wrapper.sh
2025-10-12 13:39:28 (21180): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Oct 12 10:08 queuedata.json
2025-10-12 13:39:28 (21180): Guest Log: -rwxr-xr-x. 1 atlas atlas      9206 Oct 12 14:10 init_data.xml
2025-10-12 13:39:28 (21180): Guest Log: -rwxr-xr-x. 1 atlas atlas    569682 Oct 12 14:10 input.tar.gz
2025-10-12 13:39:28 (21180): Guest Log: -rwxr-xr-x. 1 atlas atlas     15120 Oct 12 14:10 start_atlas.sh
2025-10-12 13:39:28 (21180): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Oct 12 14:10 EVNT.46676267._003607.pool.root.1 -> /data/./ATLAS.root_0
2025-10-12 13:39:28 (21180): Guest Log: -rw-r--r--. 1 atlas atlas      2550 Oct 12 14:10 pandaJob.out
2025-10-12 13:39:28 (21180): Guest Log: -rw-------. 1 atlas atlas    975528 Oct 12 14:11 agis_schedconf.cvmfs.json
2025-10-12 13:39:28 (21180): Guest Log: drwx------. 5 atlas atlas      4096 Oct 12 14:12 pilot3
2025-10-12 13:39:29 (21180): Guest Log: -rw-------. 1 atlas atlas 195034176 Oct 12 17:37 HITS.46676269._075773.pool.root.1
2025-10-12 13:39:29 (21180): Guest Log: -rw-------. 1 atlas atlas        95 Oct 12 17:38 pilot_heartbeat.json
2025-10-12 13:39:29 (21180): Guest Log: -rw-------. 1 atlas atlas      1035 Oct 12 17:38 memory_monitor_summary.json
2025-10-12 13:39:29 (21180): Guest Log: -rw-------. 1 atlas atlas   1560580 Oct 12 17:38 agis_ddmendpoints.agis.ALL.json
2025-10-12 13:39:29 (21180): Guest Log: -rw-------. 1 atlas atlas    380607 Oct 12 17:38 log.46676269._075773.job.log.tgz.1
2025-10-12 13:39:29 (21180): Guest Log: -rw-------. 1 atlas atlas      7802 Oct 12 17:38 heartbeat.json
2025-10-12 13:39:29 (21180): Guest Log: -rw-------. 1 atlas atlas      4612 Oct 12 17:39 pilotlog.txt
2025-10-12 13:39:29 (21180): Guest Log: -rw-------. 1 atlas atlas   1467676 Oct 12 17:39 log.46676269._075773.job.log.1
2025-10-12 13:39:29 (21180): Guest Log: -rw-------. 1 atlas atlas       357 Oct 12 17:39 output.list
2025-10-12 13:39:29 (21180): Guest Log: -rw-r--r--. 1 atlas atlas       620 Oct 12 17:39 runtime_log
2025-10-12 13:39:29 (21180): Guest Log: -rw-------. 1 atlas atlas   1863680 Oct 12 17:39 result.tar.gz
2025-10-12 13:39:29 (21180): Guest Log: -rw-r--r--. 1 atlas atlas      8639 Oct 12 17:39 runtime_log.err
2025-10-12 13:39:29 (21180): Guest Log: -rw-------. 1 atlas atlas       661 Oct 12 17:39 BYBLDmjB8R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmpPjNDmwivL6n.diag
2025-10-12 13:39:29 (21180): Guest Log: Looking for outputfile HITS.46676269._075773.pool.root.1
2025-10-12 13:39:29 (21180): Guest Log: HITS file was successfully produced
2025-10-12 13:39:29 (21180): Guest Log: -rw-------. 1 atlas atlas 195034176 Oct 12 17:37 /home/atlas/RunAtlas/HITS.46676269._075773.pool.root.1
2025-10-12 13:39:33 (21180): Guest Log: Successfully finished the ATLAS job!
2025-10-12 13:39:33 (21180): Guest Log: Copying the results back to the shared directory!
2025-10-12 13:39:33 (21180): Guest Log:  *** Contents of shared directory: ***
2025-10-12 13:39:33 (21180): Guest Log: total 409240
2025-10-12 13:39:33 (21180): Guest Log: -rwxrwxrwx. 1 root root 221559384 Oct 12 14:09 ATLAS.root_0
2025-10-12 13:39:33 (21180): Guest Log: -rwxrwxrwx. 1 root root 195034176 Oct 12 17:39 HITS.pool.root.1
2025-10-12 13:39:33 (21180): Guest Log: -rwxrwxrwx. 1 root root      9206 Oct 12 14:09 init_data.xml
2025-10-12 13:39:33 (21180): Guest Log: -rwxrwxrwx. 1 root root    569682 Oct 12 14:07 input.tar.gz
2025-10-12 13:39:33 (21180): Guest Log: -rwxrwxrwx. 1 root root   1863680 Oct 12  2025 result.tar.gz
2025-10-12 13:39:33 (21180): Guest Log: -rwxrwxrwx. 1 root root     15120 Oct 12 14:07 start_atlas.sh
2025-10-12 13:39:33 (21180): Guest Log:  *** Success! Shutting down the machine. ***
2025-10-12 13:39:33 (21180): VM Completion File Detected.
2025-10-12 13:39:33 (21180): Powering off VM.
2025-10-12 13:39:35 (21180): Successfully stopped VM.
2025-10-12 13:39:35 (21180): Deregistering VM. (boinc_519b1b8be9bb7d79, slot#1)
2025-10-12 13:39:35 (21180): Removing network bandwidth throttle group from VM.
2025-10-12 13:39:36 (21180): Removing VM from VirtualBox.
2025-10-12 13:39:46 (21180): called boinc_finish(0)

</stderr_txt>
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