Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:11:45 (9398): wrapper (7.7.26015): starting
02:11:45 (9398): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 02:11:45] Arguments: --nthreads 8
[2025-10-13 02:11:45] Threads: 8
[2025-10-13 02:11:45] Checking for CVMFS
[2025-10-13 02:11:46] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 02:11:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 02:11:47] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 02:11:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 02:11:48] 2.11.2.0 27863 221293 137336 151641 2 61 24638269 25165824 4632 130560 0 125003136 99.877 70743452 4386 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-10-13 02:11:48] CVMFS is ok
[2025-10-13 02:11:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 02:11:48] Checking for apptainer binary...
[2025-10-13 02:11:48] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 02:11:48] Running /usr/bin/apptainer --version
[2025-10-13 02:11:48] apptainer version 1.3.2-1.el7
[2025-10-13 02:11:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 02:11:58] cg-vwn495.simple-grid.lan
[2025-10-13 02:11:58] apptainer works
[2025-10-13 02:11:58] Set ATHENA_PROC_NUMBER=8
[2025-10-13 02:11:58] Set ATHENA_CORE_NUMBER=8
[2025-10-13 02:11:58] Starting ATLAS job with PandaID=6839988408
[2025-10-13 02:11:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 06:06:26]  *** The last 200 lines of the pilot log: ***
[2025-10-13 06:06:26] 2025-10-13 04:05:15,676 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 06:06:26] 2025-10-13 04:05:15,676 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 06:06:26] 2025-10-13 04:05:15,681 | INFO     | fitting pss+swap vs Time
[2025-10-13 06:06:26] 2025-10-13 04:05:15,681 | INFO     | sum of square deviations: 3168461268.0
[2025-10-13 06:06:26] 2025-10-13 04:05:15,683 | INFO     | sum of deviations: 54432348379.99997
[2025-10-13 06:06:26] 2025-10-13 04:05:15,683 | INFO     | mean x: 1760321617.0
[2025-10-13 06:06:26] 2025-10-13 04:05:15,684 | INFO     | mean y: 2452412.8571428573
[2025-10-13 06:06:26] 2025-10-13 04:05:15,684 | INFO     | -- intersect: -30238863927.383778
[2025-10-13 06:06:26] 2025-10-13 04:05:15,684 | INFO     | intersect: -30238863927.383778
[2025-10-13 06:06:26] 2025-10-13 04:05:15,684 | INFO     | chi2: 7.216508973984385
[2025-10-13 06:06:26] 2025-10-13 04:05:15,685 | INFO     | sum of square deviations: 2954447953.0
[2025-10-13 06:06:26] 2025-10-13 04:05:15,686 | INFO     | sum of deviations: 67372338404.0
[2025-10-13 06:06:26] 2025-10-13 04:05:15,686 | INFO     | mean x: 1760321464.5
[2025-10-13 06:06:26] 2025-10-13 04:05:15,686 | INFO     | mean y: 2461444.3018867923
[2025-10-13 06:06:26] 2025-10-13 04:05:15,687 | INFO     | -- intersect: -40139377333.2922
[2025-10-13 06:06:26] 2025-10-13 04:05:15,687 | INFO     | intersect: -40139377333.2922
[2025-10-13 06:06:26] 2025-10-13 04:05:15,687 | INFO     | chi2: 6.520356727311186
[2025-10-13 06:06:26] 2025-10-13 04:05:15,687 | INFO     | current chi2=6.520356727311186 (change=9.64666224600894 %)
[2025-10-13 06:06:26] 2025-10-13 04:05:15,687 | INFO     | right removable region: 211
[2025-10-13 06:06:26] 2025-10-13 04:05:15,688 | INFO     | sum of square deviations: 2954447953.0
[2025-10-13 06:06:26] 2025-10-13 04:05:15,689 | INFO     | sum of deviations: -18992251302.0
[2025-10-13 06:06:26] 2025-10-13 04:05:15,689 | INFO     | mean x: 1760321769.5
[2025-10-13 06:06:26] 2025-10-13 04:05:15,690 | INFO     | mean y: 2504687.2735849055
[2025-10-13 06:06:26] 2025-10-13 04:05:15,690 | INFO     | -- intersect: 11318484508.403072
[2025-10-13 06:06:26] 2025-10-13 04:05:15,690 | INFO     | intersect: 11318484508.403072
[2025-10-13 06:06:26] 2025-10-13 04:05:15,690 | INFO     | chi2: 2.5398796817149045
[2025-10-13 06:06:26] 2025-10-13 04:05:15,690 | INFO     | current chi2=2.5398796817149045 (change=64.8045933169181 %)
[2025-10-13 06:06:26] 2025-10-13 04:05:15,691 | INFO     | sum of square deviations: 2750295288.0
[2025-10-13 06:06:26] 2025-10-13 04:05:15,692 | INFO     | sum of deviations: -57300610469.999985
[2025-10-13 06:06:26] 2025-10-13 04:05:15,692 | INFO     | mean x: 1760321922.0
[2025-10-13 06:06:26] 2025-10-13 04:05:15,693 | INFO     | mean y: 2533116.8260869565
[2025-10-13 06:06:26] 2025-10-13 04:05:15,693 | INFO     | -- intersect: 36677693487.57814
[2025-10-13 06:06:26] 2025-10-13 04:05:15,693 | INFO     | intersect: 36677693487.57814
[2025-10-13 06:06:26] 2025-10-13 04:05:15,693 | INFO     | chi2: 1.0125186166111189
[2025-10-13 06:06:26] 2025-10-13 04:05:15,693 | INFO     | current chi2=1.0125186166111189 (change=60.1351739651118 %)
[2025-10-13 06:06:26] 2025-10-13 04:05:15,694 | INFO     | sum of square deviations: 2555770710.5
[2025-10-13 06:06:26] 2025-10-13 04:05:15,695 | INFO     | sum of deviations: -57748523679.5
[2025-10-13 06:06:26] 2025-10-13 04:05:15,695 | INFO     | mean x: 1760322074.5
[2025-10-13 06:06:26] 2025-10-13 04:05:15,695 | INFO     | mean y: 2533421.806930693
[2025-10-13 06:06:26] 2025-10-13 04:05:15,695 | INFO     | -- intersect: 39777619889.9206
[2025-10-13 06:06:26] 2025-10-13 04:05:15,696 | INFO     | intersect: 39777619889.9206
[2025-10-13 06:06:26] 2025-10-13 04:05:15,696 | INFO     | chi2: 0.9853198808792148
[2025-10-13 06:06:26] 2025-10-13 04:05:15,696 | INFO     | current chi2=0.9853198808792148 (change=2.686245495706309 %)
[2025-10-13 06:06:26] 2025-10-13 04:05:15,696 | INFO     | left removable region: 30
[2025-10-13 06:06:26] 2025-10-13 04:05:15,697 | INFO     | sum of square deviations: 1838657730.0
[2025-10-13 06:06:26] 2025-10-13 04:05:15,698 | INFO     | sum of deviations: -24548407144.0
[2025-10-13 06:06:26] 2025-10-13 04:05:15,698 | INFO     | mean x: 1760322349.0
[2025-10-13 06:06:26] 2025-10-13 04:05:15,698 | INFO     | mean y: 2528349.552486188
[2025-10-13 06:06:26] 2025-10-13 04:05:15,698 | INFO     | -- intersect: 23505059039.66329
[2025-10-13 06:06:26] 2025-10-13 04:05:15,698 | INFO     | intersect: 23505059039.66329
[2025-10-13 06:06:26] 2025-10-13 04:05:15,699 | INFO     | chi2: 0.16203003411079203
[2025-10-13 06:06:26] 2025-10-13 04:05:15,699 | INFO     | -- intersect: 23505059039.66329
[2025-10-13 06:06:26] 2025-10-13 04:05:15,699 | INFO     | current memory leak: -13.35 B/s (using 181 data points, chi2=0.16)
[2025-10-13 06:06:26] 2025-10-13 04:05:15,700 | INFO     | could have reported an average CPU frequency of 2249 MHz (11 samples)
[2025-10-13 06:06:26] 2025-10-13 04:05:15,700 | INFO     | ..............................
[2025-10-13 06:06:26] 2025-10-13 04:05:15,700 | INFO     | . Timing measurements:
[2025-10-13 06:06:26] 2025-10-13 04:05:15,700 | INFO     | . get job = 0 s
[2025-10-13 06:06:26] 2025-10-13 04:05:15,700 | INFO     | . initial setup = 12 s
[2025-10-13 06:06:26] 2025-10-13 04:05:15,701 | INFO     | . payload setup = 125 s
[2025-10-13 06:06:26] 2025-10-13 04:05:15,701 | INFO     | . stage-in = 0 s
[2025-10-13 06:06:26] 2025-10-13 04:05:15,701 | INFO     | . payload execution = 13351 s
[2025-10-13 06:06:26] 2025-10-13 04:05:15,701 | INFO     | . stage-out = 3 s
[2025-10-13 06:06:26] 2025-10-13 04:05:15,701 | INFO     | . log creation = 1 s
[2025-10-13 06:06:26] 2025-10-13 04:05:15,701 | INFO     | ..............................
[2025-10-13 06:06:26] 2025-10-13 04:05:15,827 | INFO     | 
[2025-10-13 06:06:26] 2025-10-13 04:05:15,827 | INFO     | job summary report
[2025-10-13 06:06:26] 2025-10-13 04:05:15,827 | INFO     | --------------------------------------------------
[2025-10-13 06:06:26] 2025-10-13 04:05:15,827 | INFO     | PanDA job id: 6839988408
[2025-10-13 06:06:26] 2025-10-13 04:05:15,827 | INFO     | task id: 46676269
[2025-10-13 06:06:26] 2025-10-13 04:05:15,828 | INFO     | errors: (none)
[2025-10-13 06:06:26] 2025-10-13 04:05:15,828 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 06:06:26] 2025-10-13 04:05:15,828 | INFO     | pilot state: finished 
[2025-10-13 06:06:26] 2025-10-13 04:05:15,828 | INFO     | transexitcode: 0
[2025-10-13 06:06:26] 2025-10-13 04:05:15,828 | INFO     | exeerrorcode: 0
[2025-10-13 06:06:26] 2025-10-13 04:05:15,828 | INFO     | exeerrordiag: 
[2025-10-13 06:06:26] 2025-10-13 04:05:15,828 | INFO     | exitcode: 0
[2025-10-13 06:06:26] 2025-10-13 04:05:15,828 | INFO     | exitmsg: OK
[2025-10-13 06:06:26] 2025-10-13 04:05:15,828 | INFO     | cpuconsumptiontime: 49857 s
[2025-10-13 06:06:26] 2025-10-13 04:05:15,828 | INFO     | nevents: 400
[2025-10-13 06:06:26] 2025-10-13 04:05:15,828 | INFO     | neventsw: 0
[2025-10-13 06:06:26] 2025-10-13 04:05:15,829 | INFO     | pid: 19715
[2025-10-13 06:06:26] 2025-10-13 04:05:15,829 | INFO     | pgrp: 19715
[2025-10-13 06:06:26] 2025-10-13 04:05:15,829 | INFO     | corecount: 8
[2025-10-13 06:06:26] 2025-10-13 04:05:15,829 | INFO     | event service: False
[2025-10-13 06:06:26] 2025-10-13 04:05:15,829 | INFO     | sizes: {0: 2348687, 1: 2348886, 12: 2348886, 22: 2348914, 33: 2348942, 44: 2348998, 55: 2349154, 65: 2349182, 76: 2349210, 87: 2349266, 95: 2349556, 97: 2349864, 1
[2025-10-13 06:06:26] 2025-10-13 04:05:15,829 | INFO     | --------------------------------------------------
[2025-10-13 06:06:26] 2025-10-13 04:05:15,829 | INFO     | 
[2025-10-13 06:06:26] 2025-10-13 04:05:15,829 | INFO     | executing command: ls -lF /var/lib/boinc/slots/11
[2025-10-13 06:06:26] 2025-10-13 04:05:16,188 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 06:06:26] 2025-10-13 04:05:16,188 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 06:06:26] 2025-10-13 04:05:16,188 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 06:06:26] 2025-10-13 04:05:16,188 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 06:06:26] 2025-10-13 04:05:16,189 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 06:06:26] 2025-10-13 04:05:16,189 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 06:06:26] 2025-10-13 04:05:16,189 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 06:06:26] 2025-10-13 04:05:16,189 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 06:06:26] 2025-10-13 04:05:16,189 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 06:06:26] 2025-10-13 04:05:16,189 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 06:06:26] 2025-10-13 04:05:16,189 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 06:06:26] 2025-10-13 04:05:16,189 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 06:06:26] 2025-10-13 04:05:16,189 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 06:06:26] 2025-10-13 04:05:16,189 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 06:06:26] 2025-10-13 04:05:16,189 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 06:06:26] 2025-10-13 04:05:16,189 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 06:06:26] 2025-10-13 04:05:16,190 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 06:06:26] 2025-10-13 04:05:16,190 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 06:06:26] 2025-10-13 04:05:16,190 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 06:06:26] 2025-10-13 04:05:16,190 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 06:06:26] 2025-10-13 04:05:16,190 | INFO     | job 6839988408 has completed (purged errors)
[2025-10-13 06:06:26] 2025-10-13 04:05:16,190 | INFO     | overall cleanup function is called
[2025-10-13 06:06:26] 2025-10-13 04:05:17,198 | INFO     | --- collectZombieJob: --- 10, [19715]
[2025-10-13 06:06:26] 2025-10-13 04:05:17,199 | INFO     | zombie collector waiting for pid 19715
[2025-10-13 06:06:26] 2025-10-13 04:05:17,199 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 06:06:26] 2025-10-13 04:05:17,199 | INFO     | collected zombie processes
[2025-10-13 06:06:26] 2025-10-13 04:05:17,199 | INFO     | will attempt to kill all subprocesses of pid=19715
[2025-10-13 06:06:26] 2025-10-13 04:05:17,297 | INFO     | process IDs to be killed: [19715] (in reverse order)
[2025-10-13 06:06:26] 2025-10-13 04:05:18,111 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 06:06:26] 2025-10-13 04:05:18,112 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 06:06:26] 2025-10-13 04:05:18,115 | INFO     | did not find any defunct processes belonging to 19715
[2025-10-13 06:06:26] 2025-10-13 04:05:18,118 | INFO     | did not find any defunct processes belonging to 19715
[2025-10-13 06:06:26] 2025-10-13 04:05:18,118 | INFO     | ready for new job
[2025-10-13 06:06:26] 2025-10-13 04:05:18,118 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 06:06:26] 2025-10-13 04:05:18,120 | INFO     | ***************************************
[2025-10-13 06:06:26] 2025-10-13 04:05:18,120 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 06:06:26] 2025-10-13 04:05:18,120 | INFO     | ***************************************
[2025-10-13 06:06:26] 2025-10-13 04:05:18,121 | INFO     | 
[2025-10-13 06:06:26] 2025-10-13 04:05:18,121 | INFO     | pilot is running in a VM
[2025-10-13 06:06:26] 2025-10-13 04:05:18,121 | INFO     | architecture information:
[2025-10-13 06:06:26] 2025-10-13 04:05:18,123 | INFO     | executing command: cat /etc/os-release
[2025-10-13 06:06:26] 2025-10-13 04:05:18,372 | INFO     | cat /etc/os-release:
[2025-10-13 06:06:26] NAME="CentOS Linux"
[2025-10-13 06:06:26] VERSION="7 (Core)"
[2025-10-13 06:06:26] ID="centos"
[2025-10-13 06:06:26] ID_LIKE="rhel fedora"
[2025-10-13 06:06:26] VERSION_ID="7"
[2025-10-13 06:06:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 06:06:26] ANSI_COLOR="0;31"
[2025-10-13 06:06:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 06:06:26] HOME_URL="https://www.centos.org/"
[2025-10-13 06:06:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 06:06:26] 
[2025-10-13 06:06:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 06:06:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 06:06:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 06:06:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 06:06:26] 
[2025-10-13 06:06:26] 2025-10-13 04:05:18,373 | INFO     | ***************************************
[2025-10-13 06:06:26] 2025-10-13 04:05:18,876 | INFO     | executing command: df -mP /var/lib/boinc/slots/11
[2025-10-13 06:06:26] 2025-10-13 04:05:19,146 | INFO     | sufficient remaining disk space (496025731072 B)
[2025-10-13 06:06:26] 2025-10-13 04:05:19,147 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 06:06:26] 2025-10-13 04:05:19,147 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 06:06:26] 2025-10-13 04:05:19,147 | INFO     | update_server=False
[2025-10-13 06:06:26] 2025-10-13 04:05:19,147 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 06:06:26] 2025-10-13 04:05:19,148 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 06:06:26] 2025-10-13 04:05:19,148 | INFO     | aborting loop
[2025-10-13 06:06:26] 2025-10-13 04:05:19,161 | INFO     | all data control threads have been joined
[2025-10-13 06:06:26] 2025-10-13 04:05:20,045 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 06:06:26] 2025-10-13 04:05:20,154 | INFO     | [job] retrieve thread has finished
[2025-10-13 06:06:26] 2025-10-13 04:05:20,156 | INFO     | [job] job monitor thread has finished
[2025-10-13 06:06:26] 2025-10-13 04:05:20,168 | INFO     | [data] control thread has finished
[2025-10-13 06:06:26] 2025-10-13 04:05:20,405 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 06:06:26] 2025-10-13 04:05:20,464 | INFO     | all job control threads have been joined
[2025-10-13 06:06:26] 2025-10-13 04:05:20,473 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 06:06:26] 2025-10-13 04:05:20,653 | INFO     | all payload control threads have been joined
[2025-10-13 06:06:26] 2025-10-13 04:05:20,724 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 06:06:26] 2025-10-13 04:05:20,844 | INFO     | [job] validate thread has finished
[2025-10-13 06:06:26] 2025-10-13 04:05:20,844 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 06:06:26] 2025-10-13 04:05:20,877 | INFO     | [payload] validate_post thread has finished
[2025-10-13 06:06:26] 2025-10-13 04:05:21,069 | INFO     | [payload] failed_post thread has finished
[2025-10-13 06:06:26] 2025-10-13 04:05:21,170 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 06:06:26] 2025-10-13 04:05:21,269 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 06:06:26] 2025-10-13 04:05:21,287 | INFO     | [data] copytool_in thread has finished
[2025-10-13 06:06:26] 2025-10-13 04:05:21,470 | INFO     | [job] control thread has finished
[2025-10-13 06:06:26] 2025-10-13 04:05:21,660 | INFO     | [payload] control thread has finished
[2025-10-13 06:06:26] 2025-10-13 04:05:21,850 | INFO     | [job] queue monitor thread has finished
[2025-10-13 06:06:26] 2025-10-13 04:05:22,052 | INFO     | [data] copytool_out thread has finished
[2025-10-13 06:06:26] 2025-10-13 04:05:24,733 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 06:06:26] 2025-10-13 04:05:47,595 | INFO     | PID=13178 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-13 06:06:26] 2025-10-13 04:05:47,595 | INFO     | .. there are 9 such processes running
[2025-10-13 06:06:26] 2025-10-13 04:05:47,596 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 06:06:26] 2025-10-13 04:05:47,596 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 06:06:26] 2025-10-13 04:05:47,596 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 06:06:26] 2025-10-13 04:06:15,393 | INFO     | [monitor] cgroup control has ended
[2025-10-13 06:06:26] 2025-10-13 04:06:16,526 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140296509843264)>', '<ExcThread(monitor, started 140296197216000)>']
[2025-10-13 06:06:26] 2025-10-13 04:06:16,768 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 06:06:26] 2025-10-13 04:06:16,769 | INFO     | [monitor] control thread has ended
[2025-10-13 06:06:26] 2025-10-13 04:06:21,551 | INFO     | all workflow threads have been joined
[2025-10-13 06:06:26] 2025-10-13 04:06:21,552 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 06:06:26] 2025-10-13 04:06:21,552 | INFO     | traces error code: 0
[2025-10-13 06:06:26] 2025-10-13 04:06:21,552 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 06:06:26] 2025-10-13 04:06:21,968 [wrapper] ==== pilot stdout END ====
[2025-10-13 06:06:26] 2025-10-13 04:06:22,011 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 06:06:26] 2025-10-13 04:06:22,063 [wrapper] pilotpid: 13178
[2025-10-13 06:06:26] 2025-10-13 04:06:22,123 [wrapper] Pilot exit status: 0
[2025-10-13 06:06:26] 2025-10-13 04:06:22,588 [wrapper] pandaids: 6839988408
[2025-10-13 06:06:26] 2025-10-13 04:06:23,489 [wrapper] cleanup supervisor_pilot 11192 13179
[2025-10-13 06:06:26] 2025-10-13 04:06:23,495 [wrapper] Test setup, not cleaning
[2025-10-13 06:06:26] 2025-10-13 04:06:23,544 [wrapper] apfmon messages muted
[2025-10-13 06:06:26] 2025-10-13 04:06:23,580 [wrapper] ==== wrapper stdout END ====
[2025-10-13 06:06:26] 2025-10-13 04:06:23,611 [wrapper] ==== wrapper stderr END ====
[2025-10-13 06:06:26]  *** Error codes and diagnostics ***
[2025-10-13 06:06:26]     "exeErrorCode": 0,
[2025-10-13 06:06:26]     "exeErrorDiag": "",
[2025-10-13 06:06:26]     "pilotErrorCode": 0,
[2025-10-13 06:06:26]     "pilotErrorDiag": "",
[2025-10-13 06:06:26]  *** Listing of results directory ***
[2025-10-13 06:06:26] total 412372
[2025-10-13 06:06:26] -rw-r--r--. 1 boinc boinc    557409 Oct 12 14:35 pilot3.tar.gz
[2025-10-13 06:06:26] -rw-r--r--. 1 boinc boinc      5112 Oct 12 14:41 queuedata.json
[2025-10-13 06:06:26] -rwx------. 1 boinc boinc     36292 Oct 12 14:42 runpilot2-wrapper.sh
[2025-10-13 06:06:26] -rw-r--r--. 1 boinc boinc       100 Oct 13 02:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 06:06:26] -rwxr-xr-x. 1 boinc boinc      7986 Oct 13 02:11 run_atlas
[2025-10-13 06:06:26] -rw-r--r--. 1 boinc boinc       105 Oct 13 02:11 job.xml
[2025-10-13 06:06:26] -rw-r--r--. 1 boinc boinc      6390 Oct 13 02:11 init_data.xml
[2025-10-13 06:06:26] -rw-r--r--. 2 boinc boinc 222903735 Oct 13 02:11 EVNT.46676267._003809.pool.root.1
[2025-10-13 06:06:26] -rw-r--r--. 2 boinc boinc     15120 Oct 13 02:11 start_atlas.sh
[2025-10-13 06:06:26] drwxrwx--x. 2 boinc boinc        68 Oct 13 02:11 shared
[2025-10-13 06:06:26] -rw-r--r--. 2 boinc boinc    569683 Oct 13 02:11 input.tar.gz
[2025-10-13 06:06:26] -rw-r--r--. 1 boinc boinc         0 Oct 13 02:11 boinc_lockfile
[2025-10-13 06:06:26] -rw-r--r--. 1 boinc boinc      2550 Oct 13 02:11 pandaJob.out
[2025-10-13 06:06:26] -rw-------. 1 boinc boinc    975603 Oct 13 02:15 agis_schedconf.cvmfs.json
[2025-10-13 06:06:26] drwx------. 5 boinc boinc      4096 Oct 13 02:15 pilot3
[2025-10-13 06:06:26] -rw-------. 1 boinc boinc 190864229 Oct 13 06:02 HITS.46676269._078501.pool.root.1
[2025-10-13 06:06:26] -rw-r--r--. 1 boinc boinc       531 Oct 13 06:02 boinc_task_state.xml
[2025-10-13 06:06:26] -rw-------. 1 boinc boinc      1017 Oct 13 06:03 memory_monitor_summary.json
[2025-10-13 06:06:26] -rw-------. 1 boinc boinc   1560580 Oct 13 06:03 agis_ddmendpoints.agis.ALL.json
[2025-10-13 06:06:26] -rw-------. 1 boinc boinc    456560 Oct 13 06:03 log.46676269._078501.job.log.tgz.1
[2025-10-13 06:06:26] -rw-------. 1 boinc boinc        95 Oct 13 06:04 pilot_heartbeat.json
[2025-10-13 06:06:26] -rw-------. 1 boinc boinc      7785 Oct 13 06:05 heartbeat.json
[2025-10-13 06:06:26] -rw-r--r--. 1 boinc boinc      8192 Oct 13 06:06 boinc_mmap_file
[2025-10-13 06:06:26] -rw-r--r--. 1 boinc boinc        28 Oct 13 06:06 wrapper_checkpoint.txt
[2025-10-13 06:06:26] -rw-------. 1 boinc boinc      4885 Oct 13 06:06 pilotlog.txt
[2025-10-13 06:06:26] -rw-------. 1 boinc boinc   1849471 Oct 13 06:06 log.46676269._078501.job.log.1
[2025-10-13 06:06:26] -rw-------. 1 boinc boinc       357 Oct 13 06:06 output.list
[2025-10-13 06:06:26] -rw-r--r--. 1 boinc boinc       620 Oct 13 06:06 runtime_log
[2025-10-13 06:06:26] -rw-------. 1 boinc boinc   2324480 Oct 13 06:06 result.tar.gz
[2025-10-13 06:06:26] -rw-r--r--. 1 boinc boinc      8717 Oct 13 06:06 runtime_log.err
[2025-10-13 06:06:26] -rw-------. 1 boinc boinc       657 Oct 13 06:06 jM9NDm3ZAS8n9Rq4apOajLDm4fhM0noT9bVof3QYDm0tTMDmfQYl7n.diag
[2025-10-13 06:06:26] -rw-r--r--. 1 boinc boinc     20597 Oct 13 06:06 stderr.txt
[2025-10-13 06:06:26] HITS file was successfully produced:
[2025-10-13 06:06:26] -rw-------. 1 boinc boinc 190864229 Oct 13 06:02 shared/HITS.pool.root.1
[2025-10-13 06:06:26]  *** Contents of shared directory: ***
[2025-10-13 06:06:26] total 406920
[2025-10-13 06:06:26] -rw-r--r--. 2 boinc boinc 222903735 Oct 13 02:11 ATLAS.root_0
[2025-10-13 06:06:26] -rw-r--r--. 2 boinc boinc     15120 Oct 13 02:11 start_atlas.sh
[2025-10-13 06:06:26] -rw-r--r--. 2 boinc boinc    569683 Oct 13 02:11 input.tar.gz
[2025-10-13 06:06:26] -rw-------. 1 boinc boinc 190864229 Oct 13 06:02 HITS.pool.root.1
[2025-10-13 06:06:26] -rw-------. 1 boinc boinc   2324480 Oct 13 06:06 result.tar.gz
06:06:27 (9398): run_atlas exited; CPU time 50035.688895
06:06:27 (9398): called boinc_finish(0)

</stderr_txt>
]]>

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