Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
10:05:44 (2517): wrapper (7.7.26015): starting
10:05:44 (2517): wrapper: running run_atlas (--nthreads 4)
[2025-10-12 10:05:45] Arguments: --nthreads 4
[2025-10-12 10:05:45] Threads: 4
[2025-10-12 10:05:45] Checking for CVMFS
[2025-10-12 10:05:45] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 10:05:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 10:05:45] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 10:05:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 10:05:45] 2.11.2.0 2433 38883 68488 151622 2 56 12950409 20275201 1 130560 0 18451975 99.988 1254709 54318 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 10:05:45] CVMFS is ok
[2025-10-12 10:05:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 10:05:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 10:05:45] Further information can be found at the LHC@home message board.
[2025-10-12 10:05:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 10:05:45] Checking for apptainer binary...
[2025-10-12 10:05:45] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 10:05:45] Running /usr/bin/apptainer --version
[2025-10-12 10:05:45] apptainer version 1.3.2-1.el7
[2025-10-12 10:05:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 10:05:45] c-205-33.aglt2.org
[2025-10-12 10:05:45] apptainer works
[2025-10-12 10:05:45] Set ATHENA_PROC_NUMBER=4
[2025-10-12 10:05:45] Set ATHENA_CORE_NUMBER=4
[2025-10-12 10:05:45] Starting ATLAS job with PandaID=6839865905
[2025-10-12 10:05:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 11:50:10]  *** The last 200 lines of the pilot log: ***
[2025-10-12 11:50:10] 2025-10-12 15:49:14,601 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 11:50:10] 2025-10-12 15:49:14,602 | INFO     | fitting pss+swap vs Time
[2025-10-12 11:50:10] 2025-10-12 15:49:14,602 | INFO     | sum of square deviations: 329031285.5
[2025-10-12 11:50:10] 2025-10-12 15:49:14,602 | INFO     | sum of deviations: -1838498398.000001
[2025-10-12 11:50:10] 2025-10-12 15:49:14,602 | INFO     | mean x: 1760281054.5
[2025-10-12 11:50:10] 2025-10-12 15:49:14,602 | INFO     | mean y: 2326066.254901961
[2025-10-12 11:50:10] 2025-10-12 15:49:14,602 | INFO     | -- intersect: 9838089537.227337
[2025-10-12 11:50:10] 2025-10-12 15:49:14,602 | INFO     | intersect: 9838089537.227337
[2025-10-12 11:50:10] 2025-10-12 15:49:14,602 | INFO     | chi2: 1.8711253731855524
[2025-10-12 11:50:10] 2025-10-12 15:49:14,602 | INFO     | sum of square deviations: 282974608.0
[2025-10-12 11:50:10] 2025-10-12 15:49:14,603 | INFO     | sum of deviations: 4260255615.999999
[2025-10-12 11:50:10] 2025-10-12 15:49:14,603 | INFO     | mean x: 1760280902.0
[2025-10-12 11:50:10] 2025-10-12 15:49:14,603 | INFO     | mean y: 2345444.649484536
[2025-10-12 11:50:10] 2025-10-12 15:49:14,603 | INFO     | -- intersect: -26499136972.751884
[2025-10-12 11:50:10] 2025-10-12 15:49:14,603 | INFO     | intersect: -26499136972.751884
[2025-10-12 11:50:10] 2025-10-12 15:49:14,603 | INFO     | chi2: 1.1258593663881913
[2025-10-12 11:50:10] 2025-10-12 15:49:14,603 | INFO     | current chi2=1.1258593663881913 (change=39.82982741175494 %)
[2025-10-12 11:50:10] 2025-10-12 15:49:14,603 | INFO     | sum of square deviations: 241429643.0
[2025-10-12 11:50:10] 2025-10-12 15:49:14,603 | INFO     | sum of deviations: 4022237337.000001
[2025-10-12 11:50:10] 2025-10-12 15:49:14,603 | INFO     | mean x: 1760280749.5
[2025-10-12 11:50:10] 2025-10-12 15:49:14,603 | INFO     | mean y: 2344569.8913043477
[2025-10-12 11:50:10] 2025-10-12 15:49:14,603 | INFO     | -- intersect: -29324074780.533062
[2025-10-12 11:50:10] 2025-10-12 15:49:14,603 | INFO     | intersect: -29324074780.533062
[2025-10-12 11:50:10] 2025-10-12 15:49:14,603 | INFO     | chi2: 1.1279499485698792
[2025-10-12 11:50:10] 2025-10-12 15:49:14,603 | INFO     | current chi2=1.1279499485698792 (change=-0.18568768392402138 %)
[2025-10-12 11:50:10] 2025-10-12 15:49:14,603 | INFO     | right removable region: 91
[2025-10-12 11:50:10] 2025-10-12 15:49:14,604 | INFO     | sum of square deviations: 282974608.0
[2025-10-12 11:50:10] 2025-10-12 15:49:14,604 | INFO     | sum of deviations: -8085595140.0
[2025-10-12 11:50:10] 2025-10-12 15:49:14,604 | INFO     | mean x: 1760281207.0
[2025-10-12 11:50:10] 2025-10-12 15:49:14,604 | INFO     | mean y: 2345630.87628866
[2025-10-12 11:50:10] 2025-10-12 15:49:14,604 | INFO     | -- intersect: 50299866220.96589
[2025-10-12 11:50:10] 2025-10-12 15:49:14,604 | INFO     | intersect: 50299866220.96589
[2025-10-12 11:50:10] 2025-10-12 15:49:14,604 | INFO     | chi2: 0.833226265110177
[2025-10-12 11:50:10] 2025-10-12 15:49:14,604 | INFO     | current chi2=0.833226265110177 (change=55.46924449580701 %)
[2025-10-12 11:50:10] 2025-10-12 15:49:14,604 | INFO     | sum of square deviations: 241429643.0
[2025-10-12 11:50:10] 2025-10-12 15:49:14,604 | INFO     | sum of deviations: -4197524985.0000005
[2025-10-12 11:50:10] 2025-10-12 15:49:14,604 | INFO     | mean x: 1760281359.5
[2025-10-12 11:50:10] 2025-10-12 15:49:14,604 | INFO     | mean y: 2331338.152173913
[2025-10-12 11:50:10] 2025-10-12 15:49:14,604 | INFO     | -- intersect: 30606796039.825188
[2025-10-12 11:50:10] 2025-10-12 15:49:14,605 | INFO     | intersect: 30606796039.825188
[2025-10-12 11:50:10] 2025-10-12 15:49:14,605 | INFO     | chi2: 0.784906799421743
[2025-10-12 11:50:10] 2025-10-12 15:49:14,605 | INFO     | current chi2=0.784906799421743 (change=5.799080959365183 %)
[2025-10-12 11:50:10] 2025-10-12 15:49:14,605 | INFO     | left removable region: 20
[2025-10-12 11:50:10] 2025-10-12 15:49:14,605 | INFO     | sum of square deviations: 110960220.0
[2025-10-12 11:50:10] 2025-10-12 15:49:14,605 | INFO     | sum of deviations: 599024147.9999999
[2025-10-12 11:50:10] 2025-10-12 15:49:14,605 | INFO     | mean x: 1760281329.0
[2025-10-12 11:50:10] 2025-10-12 15:49:14,605 | INFO     | mean y: 2356393.676056338
[2025-10-12 11:50:10] 2025-10-12 15:49:14,605 | INFO     | -- intersect: -9500608032.17433
[2025-10-12 11:50:10] 2025-10-12 15:49:14,605 | INFO     | intersect: -9500608032.17433
[2025-10-12 11:50:10] 2025-10-12 15:49:14,605 | INFO     | chi2: 0.00038842132664797425
[2025-10-12 11:50:10] 2025-10-12 15:49:14,605 | INFO     | -- intersect: -9500608032.17433
[2025-10-12 11:50:10] 2025-10-12 15:49:14,605 | INFO     | current memory leak: 5.40 B/s (using 71 data points, chi2=0.00)
[2025-10-12 11:50:10] 2025-10-12 15:49:14,605 | INFO     | could have reported an average CPU frequency of 3361 MHz (7 samples)
[2025-10-12 11:50:10] 2025-10-12 15:49:14,605 | INFO     | ..............................
[2025-10-12 11:50:10] 2025-10-12 15:49:14,606 | INFO     | . Timing measurements:
[2025-10-12 11:50:10] 2025-10-12 15:49:14,606 | INFO     | . get job = 0 s
[2025-10-12 11:50:10] 2025-10-12 15:49:14,606 | INFO     | . initial setup = 2 s
[2025-10-12 11:50:10] 2025-10-12 15:49:14,606 | INFO     | . payload setup = 3 s
[2025-10-12 11:50:10] 2025-10-12 15:49:14,606 | INFO     | . stage-in = 0 s
[2025-10-12 11:50:10] 2025-10-12 15:49:14,606 | INFO     | . payload execution = 6173 s
[2025-10-12 11:50:10] 2025-10-12 15:49:14,606 | INFO     | . stage-out = 0 s
[2025-10-12 11:50:10] 2025-10-12 15:49:14,606 | INFO     | . log creation = 0 s
[2025-10-12 11:50:10] 2025-10-12 15:49:14,606 | INFO     | ..............................
[2025-10-12 11:50:10] 2025-10-12 15:49:14,641 | INFO     | 
[2025-10-12 11:50:10] 2025-10-12 15:49:14,641 | INFO     | job summary report
[2025-10-12 11:50:10] 2025-10-12 15:49:14,642 | INFO     | --------------------------------------------------
[2025-10-12 11:50:10] 2025-10-12 15:49:14,642 | INFO     | PanDA job id: 6839865905
[2025-10-12 11:50:10] 2025-10-12 15:49:14,642 | INFO     | task id: 46676269
[2025-10-12 11:50:10] 2025-10-12 15:49:14,642 | INFO     | errors: (none)
[2025-10-12 11:50:10] 2025-10-12 15:49:14,642 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 11:50:10] 2025-10-12 15:49:14,642 | INFO     | pilot state: finished 
[2025-10-12 11:50:10] 2025-10-12 15:49:14,642 | INFO     | transexitcode: 0
[2025-10-12 11:50:10] 2025-10-12 15:49:14,642 | INFO     | exeerrorcode: 0
[2025-10-12 11:50:10] 2025-10-12 15:49:14,642 | INFO     | exeerrordiag: 
[2025-10-12 11:50:10] 2025-10-12 15:49:14,642 | INFO     | exitcode: 0
[2025-10-12 11:50:10] 2025-10-12 15:49:14,642 | INFO     | exitmsg: OK
[2025-10-12 11:50:10] 2025-10-12 15:49:14,642 | INFO     | cpuconsumptiontime: 23765 s
[2025-10-12 11:50:10] 2025-10-12 15:49:14,642 | INFO     | nevents: 400
[2025-10-12 11:50:10] 2025-10-12 15:49:14,642 | INFO     | neventsw: 0
[2025-10-12 11:50:10] 2025-10-12 15:49:14,642 | INFO     | pid: 12564
[2025-10-12 11:50:10] 2025-10-12 15:49:14,642 | INFO     | pgrp: 12564
[2025-10-12 11:50:10] 2025-10-12 15:49:14,642 | INFO     | corecount: 4
[2025-10-12 11:50:10] 2025-10-12 15:49:14,642 | INFO     | event service: False
[2025-10-12 11:50:10] 2025-10-12 15:49:14,642 | INFO     | sizes: {0: 2348737, 1: 2348879, 3: 2349141, 11: 2349169, 6179: 2376243, 6180: 2376242, 6181: 2385424, 6182: 2385480, 6187: 2385674}
[2025-10-12 11:50:10] 2025-10-12 15:49:14,642 | INFO     | --------------------------------------------------
[2025-10-12 11:50:10] 2025-10-12 15:49:14,642 | INFO     | 
[2025-10-12 11:50:10] 2025-10-12 15:49:14,642 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 11:50:10] 2025-10-12 15:49:14,653 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 11:50:10] 2025-10-12 15:49:14,653 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 11:50:10] 2025-10-12 15:49:14,653 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 11:50:10] 2025-10-12 15:49:14,653 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 11:50:10] 2025-10-12 15:49:14,653 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 11:50:10] 2025-10-12 15:49:14,653 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 11:50:10] 2025-10-12 15:49:14,653 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 11:50:10] 2025-10-12 15:49:14,653 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 11:50:10] 2025-10-12 15:49:14,654 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 11:50:10] 2025-10-12 15:49:14,654 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 11:50:10] 2025-10-12 15:49:14,654 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 11:50:10] 2025-10-12 15:49:14,654 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 11:50:10] 2025-10-12 15:49:14,654 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 11:50:10] 2025-10-12 15:49:14,654 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 11:50:10] 2025-10-12 15:49:14,654 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 11:50:10] 2025-10-12 15:49:14,654 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 11:50:10] 2025-10-12 15:49:14,654 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 11:50:10] 2025-10-12 15:49:14,654 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 11:50:10] 2025-10-12 15:49:14,654 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 11:50:10] 2025-10-12 15:49:14,654 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 11:50:10] 2025-10-12 15:49:14,654 | INFO     | job 6839865905 has completed (purged errors)
[2025-10-12 11:50:10] 2025-10-12 15:49:14,654 | INFO     | overall cleanup function is called
[2025-10-12 11:50:10] 2025-10-12 15:49:15,660 | INFO     | --- collectZombieJob: --- 10, [12564]
[2025-10-12 11:50:10] 2025-10-12 15:49:15,660 | INFO     | zombie collector waiting for pid 12564
[2025-10-12 11:50:10] 2025-10-12 15:49:15,661 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 11:50:10] 2025-10-12 15:49:15,661 | INFO     | collected zombie processes
[2025-10-12 11:50:10] 2025-10-12 15:49:15,661 | INFO     | will attempt to kill all subprocesses of pid=12564
[2025-10-12 11:50:10] 2025-10-12 15:49:15,693 | INFO     | process IDs to be killed: [12564] (in reverse order)
[2025-10-12 11:50:10] 2025-10-12 15:49:15,715 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 11:50:10] 2025-10-12 15:49:15,716 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 11:50:10] 2025-10-12 15:49:15,716 | INFO     | did not find any defunct processes belonging to 12564
[2025-10-12 11:50:10] 2025-10-12 15:49:15,717 | INFO     | did not find any defunct processes belonging to 12564
[2025-10-12 11:50:10] 2025-10-12 15:49:15,717 | INFO     | ready for new job
[2025-10-12 11:50:10] 2025-10-12 15:49:15,718 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 11:50:10] 2025-10-12 15:49:15,718 | INFO     | ***************************************
[2025-10-12 11:50:10] 2025-10-12 15:49:15,718 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 11:50:10] 2025-10-12 15:49:15,718 | INFO     | ***************************************
[2025-10-12 11:50:10] 2025-10-12 15:49:15,719 | INFO     | 
[2025-10-12 11:50:10] 2025-10-12 15:49:15,719 | INFO     | architecture information:
[2025-10-12 11:50:10] 2025-10-12 15:49:15,719 | INFO     | executing command: cat /etc/os-release
[2025-10-12 11:50:10] 2025-10-12 15:49:15,727 | INFO     | cat /etc/os-release:
[2025-10-12 11:50:10] NAME="CentOS Linux"
[2025-10-12 11:50:10] VERSION="7 (Core)"
[2025-10-12 11:50:10] ID="centos"
[2025-10-12 11:50:10] ID_LIKE="rhel fedora"
[2025-10-12 11:50:10] VERSION_ID="7"
[2025-10-12 11:50:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 11:50:10] ANSI_COLOR="0;31"
[2025-10-12 11:50:10] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 11:50:10] HOME_URL="https://www.centos.org/"
[2025-10-12 11:50:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 11:50:10] 
[2025-10-12 11:50:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 11:50:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 11:50:10] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 11:50:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 11:50:10] 
[2025-10-12 11:50:10] 2025-10-12 15:49:15,727 | INFO     | ***************************************
[2025-10-12 11:50:10] 2025-10-12 15:49:16,230 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 11:50:10] 2025-10-12 15:49:16,254 | INFO     | sufficient remaining disk space (18579718144 B)
[2025-10-12 11:50:10] 2025-10-12 15:49:16,255 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 11:50:10] 2025-10-12 15:49:16,255 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 11:50:10] 2025-10-12 15:49:16,256 | INFO     | update_server=False
[2025-10-12 11:50:10] 2025-10-12 15:49:16,256 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 11:50:10] 2025-10-12 15:49:16,256 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 11:50:10] 2025-10-12 15:49:16,257 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 11:50:10] 2025-10-12 15:49:16,424 | INFO     | all payload control threads have been joined
[2025-10-12 11:50:10] 2025-10-12 15:49:16,567 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 11:50:10] 2025-10-12 15:49:16,640 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 11:50:10] 2025-10-12 15:49:16,640 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 11:50:10] 2025-10-12 15:49:16,640 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 11:50:10] 2025-10-12 15:49:16,641 | INFO     | will abort loop
[2025-10-12 11:50:10] 2025-10-12 15:49:17,256 | INFO     | [job] retrieve thread has finished
[2025-10-12 11:50:10] 2025-10-12 15:49:17,257 | INFO     | all data control threads have been joined
[2025-10-12 11:50:10] 2025-10-12 15:49:17,262 | INFO     | [job] queue monitor thread has finished
[2025-10-12 11:50:10] 2025-10-12 15:49:17,430 | INFO     | [payload] control thread has finished
[2025-10-12 11:50:10] 2025-10-12 15:49:17,554 | INFO     | [payload] failed_post thread has finished
[2025-10-12 11:50:10] 2025-10-12 15:49:17,646 | INFO     | [job] job monitor thread has finished
[2025-10-12 11:50:10] 2025-10-12 15:49:17,891 | INFO     | [data] copytool_in thread has finished
[2025-10-12 11:50:10] 2025-10-12 15:49:17,900 | INFO     | all job control threads have been joined
[2025-10-12 11:50:10] 2025-10-12 15:49:18,067 | INFO     | [payload] validate_post thread has finished
[2025-10-12 11:50:10] 2025-10-12 15:49:18,258 | INFO     | [data] control thread has finished
[2025-10-12 11:50:10] 2025-10-12 15:49:18,573 | INFO     | [data] copytool_out thread has finished
[2025-10-12 11:50:10] 2025-10-12 15:49:18,593 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 11:50:10] 2025-10-12 15:49:18,595 | INFO     | [job] validate thread has finished
[2025-10-12 11:50:10] 2025-10-12 15:49:18,599 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 11:50:10] 2025-10-12 15:49:18,690 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 11:50:10] 2025-10-12 15:49:18,905 | INFO     | [job] control thread has finished
[2025-10-12 11:50:10] 2025-10-12 15:49:20,263 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 11:50:10] 2025-10-12 15:49:26,408 | INFO     | job.realtimelogging is not enabled
[2025-10-12 11:50:10] 2025-10-12 15:49:27,409 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 11:50:10] 2025-10-12 15:49:45,784 | INFO     | PID=6165 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-12 11:50:10] 2025-10-12 15:49:45,784 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 11:50:10] 2025-10-12 15:49:45,784 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 11:50:10] 2025-10-12 15:49:45,784 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 11:50:10] 2025-10-12 15:50:03,901 | INFO     | [monitor] cgroup control has ended
[2025-10-12 11:50:10] 2025-10-12 15:50:05,702 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139699605661504)>', '<ExcThread(monitor, started 139699012220672)>']
[2025-10-12 11:50:10] 2025-10-12 15:50:05,871 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 11:50:10] 2025-10-12 15:50:05,871 | INFO     | [monitor] control thread has ended
[2025-10-12 11:50:10] 2025-10-12 15:50:10,714 | INFO     | all workflow threads have been joined
[2025-10-12 11:50:10] 2025-10-12 15:50:10,714 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 11:50:10] 2025-10-12 15:50:10,715 | INFO     | traces error code: 0
[2025-10-12 11:50:10] 2025-10-12 15:50:10,715 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 11:50:10] 2025-10-12 15:50:10,799 [wrapper] ==== pilot stdout END ====
[2025-10-12 11:50:10] 2025-10-12 15:50:10,801 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 11:50:10] 2025-10-12 15:50:10,804 [wrapper] pilotpid: 6165
[2025-10-12 11:50:10] 2025-10-12 15:50:10,806 [wrapper] Pilot exit status: 0
[2025-10-12 11:50:10] 2025-10-12 15:50:10,812 [wrapper] pandaids: 6839865905
[2025-10-12 11:50:10] 2025-10-12 15:50:10,827 [wrapper] cleanup supervisor_pilot 11188 6166
[2025-10-12 11:50:10] 2025-10-12 15:50:10,828 [wrapper] Test setup, not cleaning
[2025-10-12 11:50:10] 2025-10-12 15:50:10,830 [wrapper] apfmon messages muted
[2025-10-12 11:50:10] 2025-10-12 15:50:10,832 [wrapper] ==== wrapper stdout END ====
[2025-10-12 11:50:10] 2025-10-12 15:50:10,833 [wrapper] ==== wrapper stderr END ====
[2025-10-12 11:50:10]  *** Error codes and diagnostics ***
[2025-10-12 11:50:10]     "exeErrorCode": 0,
[2025-10-12 11:50:10]     "exeErrorDiag": "",
[2025-10-12 11:50:10]     "pilotErrorCode": 0,
[2025-10-12 11:50:10]     "pilotErrorDiag": "",
[2025-10-12 11:50:10]  *** Listing of results directory ***
[2025-10-12 11:50:10] total 415720
[2025-10-12 11:50:10] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 05:51 pilot3.tar.gz
[2025-10-12 11:50:10] -rwx------ 1 boincer umatlas     36292 Oct 12 06:00 runpilot2-wrapper.sh
[2025-10-12 11:50:10] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 06:00 queuedata.json
[2025-10-12 11:50:10] -rw-r--r-- 1 boincer umatlas       100 Oct 12 10:05 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 11:50:10] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 10:05 run_atlas
[2025-10-12 11:50:10] -rw-r--r-- 1 boincer umatlas       105 Oct 12 10:05 job.xml
[2025-10-12 11:50:10] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 10:05 start_atlas.sh
[2025-10-12 11:50:10] drwxrwx--x 2 boincer umatlas      4096 Oct 12 10:05 shared
[2025-10-12 11:50:10] -rw-r--r-- 2 boincer umatlas    569674 Oct 12 10:05 input.tar.gz
[2025-10-12 11:50:10] -rw-r--r-- 2 boincer umatlas 220316495 Oct 12 10:05 EVNT.46676267._003600.pool.root.1
[2025-10-12 11:50:10] -rw-r--r-- 1 boincer umatlas         0 Oct 12 10:05 boinc_lockfile
[2025-10-12 11:50:10] -rw-r--r-- 1 boincer umatlas      2547 Oct 12 10:05 pandaJob.out
[2025-10-12 11:50:10] -rw------- 1 boincer umatlas    975528 Oct 12 10:05 agis_schedconf.cvmfs.json
[2025-10-12 11:50:10] -rw------- 1 boincer umatlas   1560580 Oct 12 10:05 agis_ddmendpoints.agis.ALL.json
[2025-10-12 11:50:10] drwx------ 5 boincer umatlas      4096 Oct 12 10:05 pilot3
[2025-10-12 11:50:10] -rw-r--r-- 1 boincer umatlas      6239 Oct 12 11:47 init_data.xml
[2025-10-12 11:50:10] -rw------- 1 boincer umatlas 199150974 Oct 12 11:48 HITS.46676269._075640.pool.root.1
[2025-10-12 11:50:10] -rw------- 1 boincer umatlas        95 Oct 12 11:48 pilot_heartbeat.json
[2025-10-12 11:50:10] -rw-r--r-- 1 boincer umatlas       529 Oct 12 11:48 boinc_task_state.xml
[2025-10-12 11:50:10] -rw------- 1 boincer umatlas      1045 Oct 12 11:49 memory_monitor_summary.json
[2025-10-12 11:50:10] -rw------- 1 boincer umatlas    272148 Oct 12 11:49 log.46676269._075640.job.log.tgz.1
[2025-10-12 11:50:10] -rw------- 1 boincer umatlas      7826 Oct 12 11:49 heartbeat.json
[2025-10-12 11:50:10] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 11:49 boinc_mmap_file
[2025-10-12 11:50:10] -rw-r--r-- 1 boincer umatlas        27 Oct 12 11:49 wrapper_checkpoint.txt
[2025-10-12 11:50:10] -rw------- 1 boincer umatlas      5003 Oct 12 11:50 pilotlog.txt
[2025-10-12 11:50:10] -rw------- 1 boincer umatlas    890128 Oct 12 11:50 log.46676269._075640.job.log.1
[2025-10-12 11:50:10] -rw------- 1 boincer umatlas       357 Oct 12 11:50 output.list
[2025-10-12 11:50:10] -rw-r--r-- 1 boincer umatlas       620 Oct 12 11:50 runtime_log
[2025-10-12 11:50:10] -rw------- 1 boincer umatlas   1177600 Oct 12 11:50 result.tar.gz
[2025-10-12 11:50:10] -rw------- 1 boincer umatlas       656 Oct 12 11:50 WSXNDmF37R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmpOjNDmZOl9Sn.diag
[2025-10-12 11:50:10] -rw-r--r-- 1 boincer umatlas      8703 Oct 12 11:50 runtime_log.err
[2025-10-12 11:50:10] -rw-r--r-- 1 boincer umatlas     20894 Oct 12 11:50 stderr.txt
[2025-10-12 11:50:10] HITS file was successfully produced:
[2025-10-12 11:50:10] -rw------- 1 boincer umatlas 199150974 Oct 12 11:48 shared/HITS.pool.root.1
[2025-10-12 11:50:10]  *** Contents of shared directory: ***
[2025-10-12 11:50:10] total 411376
[2025-10-12 11:50:10] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 10:05 start_atlas.sh
[2025-10-12 11:50:10] -rw-r--r-- 2 boincer umatlas    569674 Oct 12 10:05 input.tar.gz
[2025-10-12 11:50:10] -rw-r--r-- 2 boincer umatlas 220316495 Oct 12 10:05 ATLAS.root_0
[2025-10-12 11:50:10] -rw------- 1 boincer umatlas 199150974 Oct 12 11:48 HITS.pool.root.1
[2025-10-12 11:50:10] -rw------- 1 boincer umatlas   1177600 Oct 12 11:50 result.tar.gz
11:50:12 (2517): run_atlas exited; CPU time 23785.570423
11:50:12 (2517): called boinc_finish(0)

</stderr_txt>
]]>

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