Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:35:52 (762241): wrapper (7.7.26015): starting
07:35:52 (762241): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 07:35:52] Arguments: --nthreads 12
[2025-10-12 07:35:52] Threads: 12
[2025-10-12 07:35:52] Checking for CVMFS
[2025-10-12 07:35:52] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 07:35:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 07:35:52] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 07:35:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 07:35:52] 2.11.5.0 2859 31582 204316 151623 3 387 30135534 45568000 19287 130560 0 345457044 99.880 135751826 26610 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-10-12 07:35:52] CVMFS is ok
[2025-10-12 07:35:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 07:35:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 07:35:52] Further information can be found at the LHC@home message board.
[2025-10-12 07:35:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 07:35:52] Checking for apptainer binary...
[2025-10-12 07:35:52] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 07:35:52] Running /usr/bin/apptainer --version
[2025-10-12 07:35:53] apptainer version 1.4.1-1.el9
[2025-10-12 07:35:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 07:35:53] wns0069.triumf.lcg
[2025-10-12 07:35:53] apptainer works
[2025-10-12 07:35:53] Set ATHENA_PROC_NUMBER=12
[2025-10-12 07:35:53] Set ATHENA_CORE_NUMBER=12
[2025-10-12 07:35:53] Starting ATLAS job with PandaID=6839987999
[2025-10-12 07:35:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 07:41:35]  *** The last 200 lines of the pilot log: ***
[2025-10-12 07:41:35] 2025-10-12 14:40:47,080 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 07:41:35] 2025-10-12 14:40:47,080 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 07:41:35] 2025-10-12 14:40:47,081 | WARNING  | wrong length of table data, x=[1760279881.0], y=[820.0] (must be same and length>=4)
[2025-10-12 07:41:35] 2025-10-12 14:40:47,081 | INFO     | could have reported an average CPU frequency of 2558 MHz (4 samples)
[2025-10-12 07:41:35] 2025-10-12 14:40:47,081 | INFO     | ..............................
[2025-10-12 07:41:35] 2025-10-12 14:40:47,081 | INFO     | . Timing measurements:
[2025-10-12 07:41:35] 2025-10-12 14:40:47,081 | INFO     | . get job = 0 s
[2025-10-12 07:41:35] 2025-10-12 14:40:47,081 | INFO     | . initial setup = 5 s
[2025-10-12 07:41:35] 2025-10-12 14:40:47,081 | INFO     | . payload setup = 26 s
[2025-10-12 07:41:35] 2025-10-12 14:40:47,081 | INFO     | . stage-in = 0 s
[2025-10-12 07:41:35] 2025-10-12 14:40:47,082 | INFO     | . payload execution = 49 s
[2025-10-12 07:41:35] 2025-10-12 14:40:47,082 | INFO     | . stage-out = 0 s
[2025-10-12 07:41:35] 2025-10-12 14:40:47,082 | INFO     | . log creation = 0 s
[2025-10-12 07:41:35] 2025-10-12 14:40:47,082 | INFO     | ..............................
[2025-10-12 07:41:35] 2025-10-12 14:40:47,082 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-12 07:41:35] 2025-10-12 14:40:47,082 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6839987999/pilotlog.txt
[2025-10-12 07:41:35] 2025-10-12 14:40:47,120 | INFO     | time since job start (260s) is within the limit (172800.0s)
[2025-10-12 07:41:35] 2025-10-12 14:40:47,126 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-10-12 07:41:35] - Log from pilotlog.txt -
[2025-10-12 07:41:35] 2025-10-12 14:40:47,080 | INFO     | extracted standard info from prmon json
[2025-10-12 07:41:35] 2025-10-12 14:40:47,080 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 07:41:35] 2025-10-12 14:40:47,080 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 07:41:35] 2025-10-12 14:40:47,080 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 07:41:35] 2025-10-12 14:40:47,080 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 07:41:35] 2025-10-12 14:40:47,081 | WARNING  | wrong length of table data, x=[1760279881.0], y=[820.0] (must be same and length>=4)
[2025-10-12 07:41:35] 2025-10-12 14:40:47,081 | INFO     | could have reported an average CPU frequency of 2558 MHz (4 samples)
[2025-10-12 07:41:35] 2025-10-12 14:40:47,081 | INFO     | ..............................
[2025-10-12 07:41:35] 2025-10-12 14:40:47,081 | INFO     | . Timing measurements:
[2025-10-12 07:41:35] 2025-10-12 14:40:47,081 | INFO     | . get job = 0 s
[2025-10-12 07:41:35] 2025-10-12 14:40:47,081 | INFO     | . initial setup = 5 s
[2025-10-12 07:41:35] 2025-10-12 14:40:47,081 | INFO     | . payload setup = 26 s
[2025-10-12 07:41:35] 2025-10-12 14:40:47,081 | INFO     | . stage-in = 0 s
[2025-10-12 07:41:35] 2025-10-12 14:40:47,082 | INFO     | . payload execution = 49 s
[2025-10-12 07:41:35] 2025-10-12 14:40:47,082 | INFO     | . stage-out = 0 s
[2025-10-12 07:41:35] 2025-10-12 14:40:47,082 | INFO     | . log creation = 0 s
[2025-10-12 07:41:35] 2025-10-12 14:40:47,082 | INFO     | ..............................
[2025-10-12 07:41:35] 2025-10-12 14:40:47,082 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-12 07:41:35] 2025-10-12 14:40:47,082 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6839987999/pilotlog.txt
[2025-10-12 07:41:35] 2025-10-12 14:40:47,120 | INFO     | time since job start (260s) is within the limit (172800.0s)
[2025-10-12 07:41:35] 2025-10-12 14:40:47,126 | WARNING  | 
[2025-10-12 07:41:35] [begin log extracts]
[2025-10-12 07:41:35] - Log from pilotlog.txt -
[2025-10-12 07:41:35] 2025-10-12 14:40:47,080 | INFO     | extracted standard info from prmon json
[2025-10-12 07:41:35] 2025-10-12 14:40:47,080 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 07:41:35] 2025-10-12 14:40:47,080 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 07:41:35] 2025-10-12 14:40:47,080 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 07:41:35] 2025-10-12 14:40:47,080 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 07:41:35] 2025-10-12 14:40:47,081 | WARNING  | wrong length of table data, x=[1760279881.0], y=[820.0] (must be same and length>=4)
[2025-10-12 07:41:35] 2025-10-12 14:40:47,081 | INFO     | could have reported an average CPU frequency of 2558 MHz (4 samples)
[2025-10-12 07:41:35] 2025-10-12 14:40:47,081 | INFO     | ..............................
[2025-10-12 07:41:35] 2025-10-12 14:40:47,081 | INFO     | . Timing measurements:
[2025-10-12 07:41:35] 2025-10-12 14:40:47,081 | INFO     | . get job = 0 s
[2025-10-12 07:41:35] 2025-10-12 14:40:47,081 | INFO     | . initial setup = 5 s
[2025-10-12 07:41:35] 2025-10-12 14:40:47,081 | INFO     | . payload setup = 26 s
[2025-10-12 07:41:35] 2025-10-12 14:40:47,081 | INFO     | . stage-in = 0 s
[2025-10-12 07:41:35] 2025-10-12 14:40:47,082 | INFO     | . payload execution = 49 s
[2025-10-12 07:41:35] 2025-10-12 14:40:47,082 | INFO     | . stage-out = 0 s
[2025-10-12 07:41:35] 2025-10-12 14:40:47,082 | INFO     | . log creation = 0 s
[2025-10-12 07:41:35] 2025-10-12 14:40:47,082 | INFO     | ..............................
[2025-10-12 07:41:35] 2025-10-12 14:40:47,082 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-12 07:41:35] 2025-10-12 14:40:47,082 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6839987999/pilotlog.txt
[2025-10-12 07:41:35] 2025-10-12 14:40:47,120 | INFO     | time since job start (260s) is within the limit (172800.0s)
[2025-10-12 07:41:35] [end log extracts]
[2025-10-12 07:41:35] 2025-10-12 14:40:47,127 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-10-12 07:41:35] 2025-10-12 14:40:47,127 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-10-12 07:41:35] 2025-10-12 14:40:47,393 | INFO     | 
[2025-10-12 07:41:35] 2025-10-12 14:40:47,394 | INFO     | job summary report
[2025-10-12 07:41:35] 2025-10-12 14:40:47,394 | INFO     | --------------------------------------------------
[2025-10-12 07:41:35] 2025-10-12 14:40:47,394 | INFO     | PanDA job id: 6839987999
[2025-10-12 07:41:35] 2025-10-12 14:40:47,394 | INFO     | task id: 46676269
[2025-10-12 07:41:35] 2025-10-12 14:40:47,394 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-10-12 07:38:18,050 CRITICAL Transform executor raised TransformValidationExceptio
[2025-10-12 07:41:35] 2025-10-12 14:40:47,394 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 07:41:35] 2025-10-12 14:40:47,394 | INFO     | pilot state: failed 
[2025-10-12 07:41:35] 2025-10-12 14:40:47,394 | INFO     | transexitcode: 65
[2025-10-12 07:41:35] 2025-10-12 14:40:47,394 | INFO     | exeerrorcode: 65
[2025-10-12 07:41:35] 2025-10-12 14:40:47,394 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-10-12 07:41:35] 2025-10-12 14:40:47,394 | INFO     | exitcode: 65
[2025-10-12 07:41:35] 2025-10-12 14:40:47,394 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-10-12 07:41:35] 2025-10-12 14:40:47,394 | INFO     | cpuconsumptiontime: 19 s
[2025-10-12 07:41:35] 2025-10-12 14:40:47,394 | INFO     | nevents: 0
[2025-10-12 07:41:35] 2025-10-12 14:40:47,394 | INFO     | neventsw: 0
[2025-10-12 07:41:35] 2025-10-12 14:40:47,395 | INFO     | pid: 773298
[2025-10-12 07:41:35] 2025-10-12 14:40:47,395 | INFO     | pgrp: 773298
[2025-10-12 07:41:35] 2025-10-12 14:40:47,395 | INFO     | corecount: 12
[2025-10-12 07:41:35] 2025-10-12 14:40:47,395 | INFO     | event service: False
[2025-10-12 07:41:35] 2025-10-12 14:40:47,395 | INFO     | sizes: {0: 2348854, 1: 2348882, 12: 2348882, 17: 2349172, 23: 2349200, 79: 2372661, 80: 2376953, 84: 2376981, 219: 2377147}
[2025-10-12 07:41:35] 2025-10-12 14:40:47,395 | INFO     | --------------------------------------------------
[2025-10-12 07:41:35] 2025-10-12 14:40:47,395 | INFO     | 
[2025-10-12 07:41:35] 2025-10-12 14:40:47,395 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-10-12 07:41:35] 2025-10-12 14:40:47,497 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 07:41:35] 2025-10-12 14:40:47,497 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 07:41:35] 2025-10-12 14:40:47,497 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 07:41:35] 2025-10-12 14:40:47,497 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 07:41:35] 2025-10-12 14:40:47,497 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 07:41:35] 2025-10-12 14:40:47,497 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 07:41:35] 2025-10-12 14:40:47,497 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 07:41:35] 2025-10-12 14:40:47,497 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 07:41:35] 2025-10-12 14:40:47,497 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 07:41:35] 2025-10-12 14:40:47,497 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 07:41:35] 2025-10-12 14:40:47,497 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 07:41:35] 2025-10-12 14:40:47,497 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 07:41:35] 2025-10-12 14:40:47,498 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 07:41:35] 2025-10-12 14:40:47,498 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 07:41:35] 2025-10-12 14:40:47,498 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 07:41:35] 2025-10-12 14:40:47,498 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 07:41:35] 2025-10-12 14:40:47,498 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 07:41:35] 2025-10-12 14:40:47,498 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 07:41:35] 2025-10-12 14:40:47,498 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 07:41:35] 2025-10-12 14:40:47,498 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 07:41:35] 2025-10-12 14:40:47,498 | INFO     | job 6839987999 has completed (purged errors)
[2025-10-12 07:41:35] 2025-10-12 14:40:47,498 | INFO     | overall cleanup function is called
[2025-10-12 07:41:35] 2025-10-12 14:40:48,504 | INFO     | --- collectZombieJob: --- 10, [773298]
[2025-10-12 07:41:35] 2025-10-12 14:40:48,505 | INFO     | zombie collector waiting for pid 773298
[2025-10-12 07:41:35] 2025-10-12 14:40:48,505 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 07:41:35] 2025-10-12 14:40:48,505 | INFO     | collected zombie processes
[2025-10-12 07:41:35] 2025-10-12 14:40:48,505 | INFO     | will attempt to kill all subprocesses of pid=773298
[2025-10-12 07:41:35] 2025-10-12 14:40:49,312 | INFO     | process IDs to be killed: [773298] (in reverse order)
[2025-10-12 07:41:35] 2025-10-12 14:40:49,679 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 07:41:35] 2025-10-12 14:40:49,679 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 07:41:35] 2025-10-12 14:40:49,730 | INFO     | did not find any defunct processes belonging to 773298
[2025-10-12 07:41:35] 2025-10-12 14:40:49,792 | INFO     | did not find any defunct processes belonging to 773298
[2025-10-12 07:41:35] 2025-10-12 14:40:49,793 | INFO     | ready for new job
[2025-10-12 07:41:35] 2025-10-12 14:40:49,793 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 07:41:35] 2025-10-12 14:40:49,794 | INFO     | ***************************************
[2025-10-12 07:41:35] 2025-10-12 14:40:49,794 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 07:41:35] 2025-10-12 14:40:49,794 | INFO     | ***************************************
[2025-10-12 07:41:35] 2025-10-12 14:40:49,794 | INFO     | 
[2025-10-12 07:41:35] 2025-10-12 14:40:49,801 | INFO     | architecture information:
[2025-10-12 07:41:35] 2025-10-12 14:40:49,829 | INFO     | executing command: cat /etc/os-release
[2025-10-12 07:41:35] 2025-10-12 14:40:49,930 | INFO     | cat /etc/os-release:
[2025-10-12 07:41:35] NAME="CentOS Linux"
[2025-10-12 07:41:35] VERSION="7 (Core)"
[2025-10-12 07:41:35] ID="centos"
[2025-10-12 07:41:35] ID_LIKE="rhel fedora"
[2025-10-12 07:41:35] VERSION_ID="7"
[2025-10-12 07:41:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 07:41:35] ANSI_COLOR="0;31"
[2025-10-12 07:41:35] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 07:41:35] HOME_URL="https://www.centos.org/"
[2025-10-12 07:41:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 07:41:35] 
[2025-10-12 07:41:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 07:41:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 07:41:35] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 07:41:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 07:41:35] 
[2025-10-12 07:41:35] 2025-10-12 14:40:49,930 | INFO     | ***************************************
[2025-10-12 07:41:35] 2025-10-12 14:40:50,436 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-10-12 07:41:35] 2025-10-12 14:40:50,544 | INFO     | sufficient remaining disk space (1011201605632 B)
[2025-10-12 07:41:35] 2025-10-12 14:40:50,545 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 07:41:35] 2025-10-12 14:40:50,545 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 07:41:35] 2025-10-12 14:40:50,545 | INFO     | update_server=False
[2025-10-12 07:41:35] 2025-10-12 14:40:50,545 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 07:41:35] 2025-10-12 14:40:50,559 | INFO     | all job control threads have been joined
[2025-10-12 07:41:35] 2025-10-12 14:40:50,599 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 07:41:35] 2025-10-12 14:40:50,600 | INFO     | aborting loop
[2025-10-12 07:41:35] 2025-10-12 14:40:50,643 | INFO     | all data control threads have been joined
[2025-10-12 07:41:35] 2025-10-12 14:40:51,462 | INFO     | all payload control threads have been joined
[2025-10-12 07:41:35] 2025-10-12 14:40:51,550 | INFO     | [job] retrieve thread has finished
[2025-10-12 07:41:35] 2025-10-12 14:40:51,565 | INFO     | [job] control thread has finished
[2025-10-12 07:41:35] 2025-10-12 14:40:51,598 | INFO     | [job] validate thread has finished
[2025-10-12 07:41:35] 2025-10-12 14:40:51,601 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 07:41:35] 2025-10-12 14:40:51,605 | INFO     | [job] job monitor thread has finished
[2025-10-12 07:41:35] 2025-10-12 14:40:51,648 | INFO     | [data] control thread has finished
[2025-10-12 07:41:35] 2025-10-12 14:40:51,651 | INFO     | [data] copytool_in thread has finished
[2025-10-12 07:41:35] 2025-10-12 14:40:51,757 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 07:41:35] 2025-10-12 14:40:51,855 | INFO     | [payload] failed_post thread has finished
[2025-10-12 07:41:35] 2025-10-12 14:40:51,953 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 07:41:35] 2025-10-12 14:40:52,107 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 07:41:35] 2025-10-12 14:40:52,235 | INFO     | [payload] validate_post thread has finished
[2025-10-12 07:41:35] 2025-10-12 14:40:52,296 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 07:41:35] 2025-10-12 14:40:52,459 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 07:41:35] 2025-10-12 14:40:52,468 | INFO     | [payload] control thread has finished
[2025-10-12 07:41:35] 2025-10-12 14:40:53,288 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 07:41:35] 2025-10-12 14:40:53,302 | INFO     | [job] queue monitor thread has finished
[2025-10-12 07:41:35] 2025-10-12 14:40:53,960 | INFO     | [data] copytool_out thread has finished
[2025-10-12 07:41:35] 2025-10-12 14:40:57,300 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 07:41:35] 2025-10-12 14:41:20,830 | INFO     | PID=766489 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-12 07:41:35] 2025-10-12 14:41:20,830 | INFO     | .. there are 35 such processes running
[2025-10-12 07:41:35] 2025-10-12 14:41:20,830 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 07:41:35] 2025-10-12 14:41:20,830 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 07:41:35] 2025-10-12 14:41:20,830 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 07:41:35] 2025-10-12 14:41:27,668 | INFO     | [monitor] cgroup control has ended
[2025-10-12 07:41:35] 2025-10-12 14:41:29,708 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140479666571072)>', '<ExcThread(monitor, started 140478943045376)>']
[2025-10-12 07:41:35] 2025-10-12 14:41:29,884 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 07:41:35] 2025-10-12 14:41:29,885 | INFO     | [monitor] control thread has ended
[2025-10-12 07:41:35] 2025-10-12 14:41:34,734 | INFO     | all workflow threads have been joined
[2025-10-12 07:41:35] 2025-10-12 14:41:34,735 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 07:41:35] 2025-10-12 14:41:34,735 | INFO     | traces error code: 0
[2025-10-12 07:41:35] 2025-10-12 14:41:34,735 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 07:41:35] 2025-10-12 14:41:34,889 [wrapper] ==== pilot stdout END ====
[2025-10-12 07:41:35] 2025-10-12 14:41:34,891 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 07:41:35] 2025-10-12 14:41:34,893 [wrapper] pilotpid: 766489
[2025-10-12 07:41:35] 2025-10-12 14:41:34,895 [wrapper] Pilot exit status: 0
[2025-10-12 07:41:35] 2025-10-12 14:41:35,057 [wrapper] pandaids: 6839987999
[2025-10-12 07:41:35] 2025-10-12 14:41:35,251 [wrapper] cleanup supervisor_pilot  766495 766490
[2025-10-12 07:41:35] 2025-10-12 14:41:35,281 [wrapper] Test setup, not cleaning
[2025-10-12 07:41:35] 2025-10-12 14:41:35,335 [wrapper] apfmon messages muted
[2025-10-12 07:41:35] 2025-10-12 14:41:35,380 [wrapper] ==== wrapper stdout END ====
[2025-10-12 07:41:35] 2025-10-12 14:41:35,403 [wrapper] ==== wrapper stderr END ====
[2025-10-12 07:41:35]  *** Error codes and diagnostics ***
[2025-10-12 07:41:35]     "exeErrorCode": 65,
[2025-10-12 07:41:35]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-10-12 07:41:35]     "pilotErrorCode": 1305,
[2025-10-12 07:41:35]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-10-12 07:41:35]  *** Listing of results directory ***
[2025-10-12 07:41:35] total 218436
[2025-10-12 07:41:35] -rw-r--r--. 1 boinc boinc    557409 Oct 12 05:35 pilot3.tar.gz
[2025-10-12 07:41:35] -rw-r--r--. 1 boinc boinc      5112 Oct 12 05:40 queuedata.json
[2025-10-12 07:41:35] -rwx------. 1 boinc boinc     36292 Oct 12 05:40 runpilot2-wrapper.sh
[2025-10-12 07:41:35] -rw-r--r--. 1 boinc boinc       100 Oct 12 07:35 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 07:41:35] -rwxr-xr-x. 1 boinc boinc      7986 Oct 12 07:35 run_atlas
[2025-10-12 07:41:35] -rw-r--r--. 1 boinc boinc       105 Oct 12 07:35 job.xml
[2025-10-12 07:41:35] -rw-r--r--. 1 boinc boinc      6594 Oct 12 07:35 init_data.xml
[2025-10-12 07:41:35] -rw-r--r--. 2 boinc boinc 219544045 Oct 12 07:35 EVNT.46676267._003796.pool.root.1
[2025-10-12 07:41:35] drwxrwx--x. 2 boinc boinc      4096 Oct 12 07:35 shared
[2025-10-12 07:41:35] -rw-r--r--. 2 boinc boinc    569678 Oct 12 07:35 input.tar.gz
[2025-10-12 07:41:35] -rw-r--r--. 2 boinc boinc     15120 Oct 12 07:35 start_atlas.sh
[2025-10-12 07:41:35] -rw-r--r--. 1 boinc boinc         0 Oct 12 07:35 boinc_lockfile
[2025-10-12 07:41:35] -rw-r--r--. 1 boinc boinc      2550 Oct 12 07:35 pandaJob.out
[2025-10-12 07:41:35] -rw-------. 1 boinc boinc    975528 Oct 12 07:36 agis_schedconf.cvmfs.json
[2025-10-12 07:41:35] -rw-------. 1 boinc boinc   1560580 Oct 12 07:36 agis_ddmendpoints.agis.ALL.json
[2025-10-12 07:41:35] drwx------. 5 boinc boinc      4096 Oct 12 07:36 pilot3
[2025-10-12 07:41:35] -rw-------. 1 boinc boinc       952 Oct 12 07:38 memory_monitor_summary.json
[2025-10-12 07:41:35] -rw-------. 1 boinc boinc     22109 Oct 12 07:38 log.46676269._078342.job.log.tgz.1
[2025-10-12 07:41:35] -rw-------. 1 boinc boinc        95 Oct 12 07:40 pilot_heartbeat.json
[2025-10-12 07:41:35] -rw-------. 1 boinc boinc      8397 Oct 12 07:40 heartbeat.json
[2025-10-12 07:41:35] -rw-r--r--. 1 boinc boinc       523 Oct 12 07:41 boinc_task_state.xml
[2025-10-12 07:41:35] -rw-------. 1 boinc boinc      4822 Oct 12 07:41 pilotlog.txt
[2025-10-12 07:41:35] -rw-r--r--. 1 boinc boinc      8192 Oct 12 07:41 boinc_mmap_file
[2025-10-12 07:41:35] -rw-r--r--. 1 boinc boinc        22 Oct 12 07:41 wrapper_checkpoint.txt
[2025-10-12 07:41:35] -rw-------. 1 boinc boinc     93291 Oct 12 07:41 log.46676269._078342.job.log.1
[2025-10-12 07:41:35] -rw-------. 1 boinc boinc       188 Oct 12 07:41 output.list
[2025-10-12 07:41:35] -rw-r--r--. 1 boinc boinc       620 Oct 12 07:41 runtime_log
[2025-10-12 07:41:35] -rw-------. 1 boinc boinc    133120 Oct 12 07:41 result.tar.gz
[2025-10-12 07:41:35] -rw-------. 1 boinc boinc       643 Oct 12 07:41 YVGKDmJYAS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmNpjNDmeFaqSm.diag
[2025-10-12 07:41:35] -rw-r--r--. 1 boinc boinc      8528 Oct 12 07:41 runtime_log.err
[2025-10-12 07:41:35] -rw-r--r--. 1 boinc boinc     21728 Oct 12 07:41 stderr.txt
[2025-10-12 07:41:35] No HITS result produced
[2025-10-12 07:41:35]  *** Contents of shared directory: ***
[2025-10-12 07:41:35] total 215112
[2025-10-12 07:41:35] -rw-r--r--. 2 boinc boinc 219544045 Oct 12 07:35 ATLAS.root_0
[2025-10-12 07:41:35] -rw-r--r--. 2 boinc boinc    569678 Oct 12 07:35 input.tar.gz
[2025-10-12 07:41:35] -rw-r--r--. 2 boinc boinc     15120 Oct 12 07:35 start_atlas.sh
[2025-10-12 07:41:35] -rw-------. 1 boinc boinc    133120 Oct 12 07:41 result.tar.gz
07:41:37 (762241): run_atlas exited; CPU time 29.698384
07:41:37 (762241): called boinc_finish(0)

</stderr_txt>
]]>

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