Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
10:01:13 (28413): wrapper (7.7.26015): starting
10:01:13 (28413): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 10:01:13] Arguments: --nthreads 12
[2025-10-12 10:01:13] Threads: 12
[2025-10-12 10:01:13] Checking for CVMFS
[2025-10-12 10:01:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 10:01:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 10:01:13] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 10:01:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 10:01:13] 2.11.2.0 723 52922 83156 151621 1 57 13291058 20275200 1 130560 0 29714126 99.956 2386515 32804 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 10:01:13] CVMFS is ok
[2025-10-12 10:01:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 10:01:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 10:01:13] Further information can be found at the LHC@home message board.
[2025-10-12 10:01:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 10:01:13] Checking for apptainer binary...
[2025-10-12 10:01:13] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 10:01:13] Running /usr/bin/apptainer --version
[2025-10-12 10:01:13] apptainer version 1.3.2-1.el7
[2025-10-12 10:01:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 10:01:15] c-205-1.aglt2.org
[2025-10-12 10:01:15] apptainer works
[2025-10-12 10:01:15] Set ATHENA_PROC_NUMBER=12
[2025-10-12 10:01:15] Set ATHENA_CORE_NUMBER=12
[2025-10-12 10:01:15] Starting ATLAS job with PandaID=6839987962
[2025-10-12 10:01:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 11:14:42]  *** The last 200 lines of the pilot log: ***
[2025-10-12 11:14:42]  status_code=0
[2025-10-12 11:14:42]  storage_token=
[2025-10-12 11:14:42]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6839987962/log.46676269._078306.job.log.tgz.1
[2025-10-12 11:14:42]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/6d/06/log.46676269._078306.job.log.tgz.1
[2025-10-12 11:14:42]  workdir=None
[2025-10-12 11:14:42] ]
[2025-10-12 11:14:42] 2025-10-12 15:13:34,133 | INFO     | transferring file log.46676269._078306.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6839987962/log.46676269._078306.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-12 11:14:42] 2025-10-12 15:13:34,133 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6839987962/log.46676269._078306.job.log.tgz.1 /tmp/boinchome/slots/0/log.46676269._078306.job
[2025-10-12 11:14:42] 2025-10-12 15:13:34,155 | INFO     | adding to output.list: log.46676269._078306.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/6d/06/log.46676269._078306.job.log.tg
[2025-10-12 11:14:42] 2025-10-12 15:13:34,156 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 11:14:42] 2025-10-12 15:13:34,157 | INFO     | summary of transferred files:
[2025-10-12 11:14:42] 2025-10-12 15:13:34,157 | INFO     |  -- lfn=log.46676269._078306.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 11:14:42] 2025-10-12 15:13:34,157 | INFO     | stage-out finished correctly
[2025-10-12 11:14:42] 2025-10-12 15:13:34,458 | INFO     | time since job start (4324s) is within the limit (172800.0s)
[2025-10-12 11:14:42] 2025-10-12 15:13:36,459 | INFO     | time since job start (4326s) is within the limit (172800.0s)
[2025-10-12 11:14:42] 2025-10-12 15:13:37,295 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 11:14:42] 2025-10-12 15:13:37,374 | INFO     | job 6839987962 has state=finished
[2025-10-12 11:14:42] 2025-10-12 15:13:37,374 | INFO     | preparing for final server update for job 6839987962 in state='finished'
[2025-10-12 11:14:42] 2025-10-12 15:13:37,375 | INFO     | this job has now completed (state=finished)
[2025-10-12 11:14:42] 2025-10-12 15:13:37,375 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 11:14:42] 2025-10-12 15:13:37,375 | INFO     | log transfer has been attempted: DONE
[2025-10-12 11:14:42] 2025-10-12 15:13:37,375 | INFO     | job 6839987962 has finished - writing final server update
[2025-10-12 11:14:42] 2025-10-12 15:13:37,376 | INFO     | total number of processed events: 400 (read)
[2025-10-12 11:14:42] 2025-10-12 15:13:37,376 | INFO     | executing command: lscpu
[2025-10-12 11:14:42] 2025-10-12 15:13:37,402 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 11:14:42] 2025-10-12 15:13:37,575 | INFO     | PID=32174 has CPU usage=5.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 11:14:42] 2025-10-12 15:13:38,584 | INFO     | time since job start (4328s) is within the limit (172800.0s)
[2025-10-12 11:14:42] 2025-10-12 15:13:38,861 | WARNING  | process 6289 can no longer be monitored (due to stat problems) - aborting
[2025-10-12 11:14:42] 2025-10-12 15:13:38,861 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6839987962/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 11:14:42] 2025-10-12 15:13:38,948 | INFO     | number of running child processes to parent process 6289: 1
[2025-10-12 11:14:42] 2025-10-12 15:13:38,948 | INFO     | maximum number of monitored processes: 6
[2025-10-12 11:14:42] 2025-10-12 15:13:40,590 | INFO     | time since job start (4330s) is within the limit (172800.0s)
[2025-10-12 11:14:42] 2025-10-12 15:13:41,451 | INFO     | monitor loop #323: job 0:6839987962 is in state 'finished'
[2025-10-12 11:14:42] 2025-10-12 15:13:41,451 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 11:14:42] 2025-10-12 15:13:42,099 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-12 11:14:42] 2025-10-12 15:13:42,102 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1706.9166666666667
[2025-10-12 11:14:42] 2025-10-12 15:13:42,105 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6839987962/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 11:14:42] 2025-10-12 15:13:42,106 | INFO     | extracted standard info from prmon json
[2025-10-12 11:14:42] 2025-10-12 15:13:42,106 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 11:14:42] 2025-10-12 15:13:42,106 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 11:14:42] 2025-10-12 15:13:42,106 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 11:14:42] 2025-10-12 15:13:42,107 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 11:14:42] 2025-10-12 15:13:42,109 | INFO     | fitting pss+swap vs Time
[2025-10-12 11:14:42] 2025-10-12 15:13:42,109 | INFO     | sum of square deviations: 81266640.0
[2025-10-12 11:14:42] 2025-10-12 15:13:42,109 | INFO     | sum of deviations: 1349689172.0
[2025-10-12 11:14:42] 2025-10-12 15:13:42,110 | INFO     | mean x: 1760279945.5
[2025-10-12 11:14:42] 2025-10-12 15:13:42,110 | INFO     | mean y: 2669123.0
[2025-10-12 11:14:42] 2025-10-12 15:13:42,110 | INFO     | -- intersect: -29232337789.185616
[2025-10-12 11:14:42] 2025-10-12 15:13:42,110 | INFO     | intersect: -29232337789.185616
[2025-10-12 11:14:42] 2025-10-12 15:13:42,110 | INFO     | chi2: 0.0024564018235668037
[2025-10-12 11:14:42] 2025-10-12 15:13:42,110 | INFO     | -- intersect: -29232337789.185616
[2025-10-12 11:14:42] 2025-10-12 15:13:42,111 | INFO     | current memory leak: 16.61 B/s (using 64 data points, chi2=0.00)
[2025-10-12 11:14:42] 2025-10-12 15:13:42,111 | INFO     | could have reported an average CPU frequency of 2037 MHz (6 samples)
[2025-10-12 11:14:42] 2025-10-12 15:13:42,111 | INFO     | ..............................
[2025-10-12 11:14:42] 2025-10-12 15:13:42,111 | INFO     | . Timing measurements:
[2025-10-12 11:14:42] 2025-10-12 15:13:42,112 | INFO     | . get job = 0 s
[2025-10-12 11:14:42] 2025-10-12 15:13:42,112 | INFO     | . initial setup = 2 s
[2025-10-12 11:14:42] 2025-10-12 15:13:42,112 | INFO     | . payload setup = 7 s
[2025-10-12 11:14:42] 2025-10-12 15:13:42,112 | INFO     | . stage-in = 0 s
[2025-10-12 11:14:42] 2025-10-12 15:13:42,112 | INFO     | . payload execution = 4296 s
[2025-10-12 11:14:42] 2025-10-12 15:13:42,112 | INFO     | . stage-out = 0 s
[2025-10-12 11:14:42] 2025-10-12 15:13:42,112 | INFO     | . log creation = 0 s
[2025-10-12 11:14:42] 2025-10-12 15:13:42,112 | INFO     | ..............................
[2025-10-12 11:14:42] 2025-10-12 15:13:42,194 | INFO     | 
[2025-10-12 11:14:42] 2025-10-12 15:13:42,195 | INFO     | job summary report
[2025-10-12 11:14:42] 2025-10-12 15:13:42,195 | INFO     | --------------------------------------------------
[2025-10-12 11:14:42] 2025-10-12 15:13:42,195 | INFO     | PanDA job id: 6839987962
[2025-10-12 11:14:42] 2025-10-12 15:13:42,195 | INFO     | task id: 46676269
[2025-10-12 11:14:42] 2025-10-12 15:13:42,195 | INFO     | errors: (none)
[2025-10-12 11:14:42] 2025-10-12 15:13:42,196 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 11:14:42] 2025-10-12 15:13:42,196 | INFO     | pilot state: finished 
[2025-10-12 11:14:42] 2025-10-12 15:13:42,196 | INFO     | transexitcode: 0
[2025-10-12 11:14:42] 2025-10-12 15:13:42,196 | INFO     | exeerrorcode: 0
[2025-10-12 11:14:42] 2025-10-12 15:13:42,196 | INFO     | exeerrordiag: 
[2025-10-12 11:14:42] 2025-10-12 15:13:42,196 | INFO     | exitcode: 0
[2025-10-12 11:14:42] 2025-10-12 15:13:42,196 | INFO     | exitmsg: OK
[2025-10-12 11:14:42] 2025-10-12 15:13:42,196 | INFO     | cpuconsumptiontime: 46240 s
[2025-10-12 11:14:42] 2025-10-12 15:13:42,197 | INFO     | nevents: 400
[2025-10-12 11:14:42] 2025-10-12 15:13:42,197 | INFO     | neventsw: 0
[2025-10-12 11:14:42] 2025-10-12 15:13:42,197 | INFO     | pid: 6289
[2025-10-12 11:14:42] 2025-10-12 15:13:42,197 | INFO     | pgrp: 6289
[2025-10-12 11:14:42] 2025-10-12 15:13:42,197 | INFO     | corecount: 12
[2025-10-12 11:14:42] 2025-10-12 15:13:42,197 | INFO     | event service: False
[2025-10-12 11:14:42] 2025-10-12 15:13:42,197 | INFO     | sizes: {0: 2348027, 1: 2348883, 6: 2349145, 12: 2349173, 4307: 2375219, 4308: 2384217, 4311: 2384401, 4316: 2384595}
[2025-10-12 11:14:42] 2025-10-12 15:13:42,198 | INFO     | --------------------------------------------------
[2025-10-12 11:14:42] 2025-10-12 15:13:42,198 | INFO     | 
[2025-10-12 11:14:42] 2025-10-12 15:13:42,198 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 11:14:42] 2025-10-12 15:13:42,222 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 11:14:42] 2025-10-12 15:13:42,222 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 11:14:42] 2025-10-12 15:13:42,223 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 11:14:42] 2025-10-12 15:13:42,223 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 11:14:42] 2025-10-12 15:13:42,223 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 11:14:42] 2025-10-12 15:13:42,223 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 11:14:42] 2025-10-12 15:13:42,223 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 11:14:42] 2025-10-12 15:13:42,223 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 11:14:42] 2025-10-12 15:13:42,224 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 11:14:42] 2025-10-12 15:13:42,224 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 11:14:42] 2025-10-12 15:13:42,224 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 11:14:42] 2025-10-12 15:13:42,224 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 11:14:42] 2025-10-12 15:13:42,224 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 11:14:42] 2025-10-12 15:13:42,224 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 11:14:42] 2025-10-12 15:13:42,225 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 11:14:42] 2025-10-12 15:13:42,225 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 11:14:42] 2025-10-12 15:13:42,225 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 11:14:42] 2025-10-12 15:13:42,225 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 11:14:42] 2025-10-12 15:13:42,225 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 11:14:42] 2025-10-12 15:13:42,225 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 11:14:42] 2025-10-12 15:13:42,226 | INFO     | job 6839987962 has completed (purged errors)
[2025-10-12 11:14:42] 2025-10-12 15:13:42,226 | INFO     | overall cleanup function is called
[2025-10-12 11:14:42] 2025-10-12 15:13:43,233 | INFO     | --- collectZombieJob: --- 10, [6289]
[2025-10-12 11:14:42] 2025-10-12 15:13:43,233 | INFO     | zombie collector waiting for pid 6289
[2025-10-12 11:14:42] 2025-10-12 15:13:43,243 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 11:14:42] 2025-10-12 15:13:43,243 | INFO     | collected zombie processes
[2025-10-12 11:14:42] 2025-10-12 15:13:43,243 | INFO     | will attempt to kill all subprocesses of pid=6289
[2025-10-12 11:14:42] 2025-10-12 15:13:43,333 | INFO     | process IDs to be killed: [6289] (in reverse order)
[2025-10-12 11:14:42] 2025-10-12 15:13:43,387 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 11:14:42] 2025-10-12 15:13:43,388 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 11:14:42] 2025-10-12 15:13:43,391 | INFO     | did not find any defunct processes belonging to 6289
[2025-10-12 11:14:42] 2025-10-12 15:13:43,394 | INFO     | did not find any defunct processes belonging to 6289
[2025-10-12 11:14:42] 2025-10-12 15:13:43,395 | INFO     | ready for new job
[2025-10-12 11:14:42] 2025-10-12 15:13:43,395 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 11:14:42] 2025-10-12 15:13:43,396 | INFO     | ***************************************
[2025-10-12 11:14:42] 2025-10-12 15:13:43,396 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 11:14:42] 2025-10-12 15:13:43,397 | INFO     | ***************************************
[2025-10-12 11:14:42] 2025-10-12 15:13:43,397 | INFO     | 
[2025-10-12 11:14:42] 2025-10-12 15:13:43,397 | INFO     | architecture information:
[2025-10-12 11:14:42] 2025-10-12 15:13:43,398 | INFO     | executing command: cat /etc/os-release
[2025-10-12 11:14:42] 2025-10-12 15:13:43,413 | INFO     | cat /etc/os-release:
[2025-10-12 11:14:42] NAME="CentOS Linux"
[2025-10-12 11:14:42] VERSION="7 (Core)"
[2025-10-12 11:14:42] ID="centos"
[2025-10-12 11:14:42] ID_LIKE="rhel fedora"
[2025-10-12 11:14:42] VERSION_ID="7"
[2025-10-12 11:14:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 11:14:42] ANSI_COLOR="0;31"
[2025-10-12 11:14:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 11:14:42] HOME_URL="https://www.centos.org/"
[2025-10-12 11:14:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 11:14:42] 
[2025-10-12 11:14:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 11:14:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 11:14:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 11:14:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 11:14:42] 
[2025-10-12 11:14:42] 2025-10-12 15:13:43,413 | INFO     | ***************************************
[2025-10-12 11:14:42] 2025-10-12 15:13:43,916 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 11:14:42] 2025-10-12 15:13:43,933 | INFO     | sufficient remaining disk space (29485957120 B)
[2025-10-12 11:14:42] 2025-10-12 15:13:43,933 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 11:14:42] 2025-10-12 15:13:43,934 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 11:14:42] 2025-10-12 15:13:43,934 | INFO     | update_server=False
[2025-10-12 11:14:42] 2025-10-12 15:13:43,934 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 11:14:42] 2025-10-12 15:13:43,934 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 11:14:42] 2025-10-12 15:13:43,935 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 11:14:42] 2025-10-12 15:13:43,955 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 11:14:42] 2025-10-12 15:13:43,955 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 11:14:42] 2025-10-12 15:13:43,955 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 11:14:42] 2025-10-12 15:13:43,955 | INFO     | will abort loop
[2025-10-12 11:14:42] 2025-10-12 15:13:44,583 | INFO     | all data control threads have been joined
[2025-10-12 11:14:42] 2025-10-12 15:13:44,754 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 11:14:42] 2025-10-12 15:13:44,940 | INFO     | [job] retrieve thread has finished
[2025-10-12 11:14:42] 2025-10-12 15:13:44,940 | INFO     | [job] queue monitor thread has finished
[2025-10-12 11:14:42] 2025-10-12 15:13:44,956 | INFO     | all payload control threads have been joined
[2025-10-12 11:14:42] 2025-10-12 15:13:44,960 | INFO     | [job] job monitor thread has finished
[2025-10-12 11:14:42] 2025-10-12 15:13:44,982 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 11:14:42] 2025-10-12 15:13:45,203 | INFO     | all job control threads have been joined
[2025-10-12 11:14:42] 2025-10-12 15:13:45,517 | INFO     | [data] copytool_in thread has finished
[2025-10-12 11:14:42] 2025-10-12 15:13:45,589 | INFO     | [data] control thread has finished
[2025-10-12 11:14:42] 2025-10-12 15:13:45,629 | INFO     | [payload] validate_post thread has finished
[2025-10-12 11:14:42] 2025-10-12 15:13:45,758 | INFO     | [payload] failed_post thread has finished
[2025-10-12 11:14:42] 2025-10-12 15:13:45,961 | INFO     | [payload] control thread has finished
[2025-10-12 11:14:42] 2025-10-12 15:13:46,208 | INFO     | [job] control thread has finished
[2025-10-12 11:14:42] 2025-10-12 15:13:46,349 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 11:14:42] 2025-10-12 15:13:46,381 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 11:14:42] 2025-10-12 15:13:46,384 | INFO     | [job] validate thread has finished
[2025-10-12 11:14:42] 2025-10-12 15:13:46,760 | INFO     | [data] copytool_out thread has finished
[2025-10-12 11:14:42] 2025-10-12 15:13:47,941 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 11:14:42] 2025-10-12 15:13:54,650 | INFO     | job.realtimelogging is not enabled
[2025-10-12 11:14:42] 2025-10-12 15:13:55,655 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 11:14:42] 2025-10-12 15:14:13,791 | INFO     | PID=32174 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 11:14:42] 2025-10-12 15:14:13,791 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 11:14:42] 2025-10-12 15:14:13,791 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 11:14:42] 2025-10-12 15:14:13,791 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 11:14:42] 2025-10-12 15:14:36,441 | INFO     | [monitor] cgroup control has ended
[2025-10-12 11:14:42] 2025-10-12 15:14:36,913 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140533102126912)>', '<ExcThread(monitor, started 140532386879232)>']
[2025-10-12 11:14:42] 2025-10-12 15:14:37,913 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 11:14:42] 2025-10-12 15:14:37,914 | INFO     | [monitor] control thread has ended
[2025-10-12 11:14:42] 2025-10-12 15:14:41,940 | INFO     | all workflow threads have been joined
[2025-10-12 11:14:42] 2025-10-12 15:14:41,947 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 11:14:42] 2025-10-12 15:14:41,947 | INFO     | traces error code: 0
[2025-10-12 11:14:42] 2025-10-12 15:14:41,948 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 11:14:42] 2025-10-12 15:14:42,039 [wrapper] ==== pilot stdout END ====
[2025-10-12 11:14:42] 2025-10-12 15:14:42,043 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 11:14:42] 2025-10-12 15:14:42,047 [wrapper] pilotpid: 32174
[2025-10-12 11:14:42] 2025-10-12 15:14:42,051 [wrapper] Pilot exit status: 0
[2025-10-12 11:14:42] 2025-10-12 15:14:42,068 [wrapper] pandaids: 6839987962
[2025-10-12 11:14:42] 2025-10-12 15:14:42,113 [wrapper] cleanup supervisor_pilot 24987 32175
[2025-10-12 11:14:42] 2025-10-12 15:14:42,117 [wrapper] Test setup, not cleaning
[2025-10-12 11:14:42] 2025-10-12 15:14:42,121 [wrapper] apfmon messages muted
[2025-10-12 11:14:42] 2025-10-12 15:14:42,125 [wrapper] ==== wrapper stdout END ====
[2025-10-12 11:14:42] 2025-10-12 15:14:42,129 [wrapper] ==== wrapper stderr END ====
[2025-10-12 11:14:42]  *** Error codes and diagnostics ***
[2025-10-12 11:14:42]     "exeErrorCode": 0,
[2025-10-12 11:14:42]     "exeErrorDiag": "",
[2025-10-12 11:14:42]     "pilotErrorCode": 0,
[2025-10-12 11:14:42]     "pilotErrorDiag": "",
[2025-10-12 11:14:42]  *** Listing of results directory ***
[2025-10-12 11:14:42] total 411756
[2025-10-12 11:14:42] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 08:35 pilot3.tar.gz
[2025-10-12 11:14:42] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 08:38 queuedata.json
[2025-10-12 11:14:42] -rwx------ 1 boincer umatlas     36292 Oct 12 08:39 runpilot2-wrapper.sh
[2025-10-12 11:14:42] -rw-r--r-- 1 boincer umatlas       100 Oct 12 10:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 11:14:42] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 10:01 run_atlas
[2025-10-12 11:14:42] -rw-r--r-- 1 boincer umatlas       105 Oct 12 10:01 job.xml
[2025-10-12 11:14:42] -rw-r--r-- 2 boincer umatlas 220613079 Oct 12 10:01 EVNT.46676267._003795.pool.root.1
[2025-10-12 11:14:42] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 10:01 start_atlas.sh
[2025-10-12 11:14:42] drwxrwx--x 2 boincer umatlas      4096 Oct 12 10:01 shared
[2025-10-12 11:14:42] -rw-r--r-- 2 boincer umatlas    569676 Oct 12 10:01 input.tar.gz
[2025-10-12 11:14:42] -rw-r--r-- 1 boincer umatlas         0 Oct 12 10:01 boinc_lockfile
[2025-10-12 11:14:42] -rw-r--r-- 1 boincer umatlas      2549 Oct 12 10:01 pandaJob.out
[2025-10-12 11:14:42] -rw------- 1 boincer umatlas    975528 Oct 12 10:01 agis_schedconf.cvmfs.json
[2025-10-12 11:14:42] -rw------- 1 boincer umatlas   1560580 Oct 12 10:01 agis_ddmendpoints.agis.ALL.json
[2025-10-12 11:14:42] drwx------ 5 boincer umatlas      4096 Oct 12 10:01 pilot3
[2025-10-12 11:14:42] -rw-r--r-- 1 boincer umatlas      5952 Oct 12 11:10 init_data.xml
[2025-10-12 11:14:42] -rw------- 1 boincer umatlas 195132411 Oct 12 11:13 HITS.46676269._078306.pool.root.1
[2025-10-12 11:14:42] -rw-r--r-- 1 boincer umatlas       529 Oct 12 11:13 boinc_task_state.xml
[2025-10-12 11:14:42] -rw------- 1 boincer umatlas        95 Oct 12 11:13 pilot_heartbeat.json
[2025-10-12 11:14:42] -rw------- 1 boincer umatlas      1050 Oct 12 11:13 memory_monitor_summary.json
[2025-10-12 11:14:42] -rw------- 1 boincer umatlas    368349 Oct 12 11:13 log.46676269._078306.job.log.tgz.1
[2025-10-12 11:14:42] -rw------- 1 boincer umatlas      7842 Oct 12 11:13 heartbeat.json
[2025-10-12 11:14:42] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 11:14 boinc_mmap_file
[2025-10-12 11:14:42] -rw-r--r-- 1 boincer umatlas        27 Oct 12 11:14 wrapper_checkpoint.txt
[2025-10-12 11:14:42] -rw------- 1 boincer umatlas      5004 Oct 12 11:14 pilotlog.txt
[2025-10-12 11:14:42] -rw------- 1 boincer umatlas    630134 Oct 12 11:14 log.46676269._078306.job.log.1
[2025-10-12 11:14:42] -rw------- 1 boincer umatlas       357 Oct 12 11:14 output.list
[2025-10-12 11:14:42] -rw-r--r-- 1 boincer umatlas       620 Oct 12 11:14 runtime_log
[2025-10-12 11:14:42] -rw------- 1 boincer umatlas   1013760 Oct 12 11:14 result.tar.gz
[2025-10-12 11:14:42] -rw-r--r-- 1 boincer umatlas      8700 Oct 12 11:14 runtime_log.err
[2025-10-12 11:14:42] -rw------- 1 boincer umatlas       658 Oct 12 11:14 QRhNDm7WAS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmKojNDmqCux4m.diag
[2025-10-12 11:14:42] -rw-r--r-- 1 boincer umatlas     22149 Oct 12 11:14 stderr.txt
[2025-10-12 11:14:42] HITS file was successfully produced:
[2025-10-12 11:14:42] -rw------- 1 boincer umatlas 195132411 Oct 12 11:13 shared/HITS.pool.root.1
[2025-10-12 11:14:42]  *** Contents of shared directory: ***
[2025-10-12 11:14:42] total 407576
[2025-10-12 11:14:42] -rw-r--r-- 2 boincer umatlas 220613079 Oct 12 10:01 ATLAS.root_0
[2025-10-12 11:14:42] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 10:01 start_atlas.sh
[2025-10-12 11:14:42] -rw-r--r-- 2 boincer umatlas    569676 Oct 12 10:01 input.tar.gz
[2025-10-12 11:14:42] -rw------- 1 boincer umatlas 195132411 Oct 12 11:13 HITS.pool.root.1
[2025-10-12 11:14:42] -rw------- 1 boincer umatlas   1013760 Oct 12 11:14 result.tar.gz
11:14:43 (28413): run_atlas exited; CPU time 46210.220851
11:14:43 (28413): called boinc_finish(0)

</stderr_txt>
]]>

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