Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:03:23 (2204280): wrapper (7.7.26015): starting
10:03:23 (2204280): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 10:03:23] Arguments: --nthreads 8
[2025-10-12 10:03:23] Threads: 8
[2025-10-12 10:03:23] Checking for CVMFS
[2025-10-12 10:03:23] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 10:03:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 10:03:24] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 10:03:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 10:03:25] 2.13.2.0 7534 77432 141924 151621 1 740 37636997 40960000 33281 16776704 0 465121787 99.774 265141005 44655 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 10:03:25] CVMFS is ok
[2025-10-12 10:03:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 10:03:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 10:03:25] Further information can be found at the LHC@home message board.
[2025-10-12 10:03:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 10:03:25] Checking for apptainer binary...
[2025-10-12 10:03:25] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 10:03:25] Running /usr/bin/apptainer --version
[2025-10-12 10:03:25] apptainer version 1.4.3-1.el9
[2025-10-12 10:03:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 10:03:25] c-208-39.aglt2.org
[2025-10-12 10:03:25] apptainer works
[2025-10-12 10:03:25] Set ATHENA_PROC_NUMBER=8
[2025-10-12 10:03:25] Set ATHENA_CORE_NUMBER=8
[2025-10-12 10:03:26] Starting ATLAS job with PandaID=6839636973
[2025-10-12 10:03:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 11:32:02]  *** The last 200 lines of the pilot log: ***
[2025-10-12 11:32:03] 2025-10-12 15:30:49,272 | INFO     | log transfer has been attempted: DONE
[2025-10-12 11:32:03] 2025-10-12 15:30:49,272 | INFO     | job 6839636973 has finished - writing final server update
[2025-10-12 11:32:03] 2025-10-12 15:30:49,272 | INFO     | total number of processed events: 400 (read)
[2025-10-12 11:32:03] 2025-10-12 15:30:49,282 | INFO     | executing command: lscpu
[2025-10-12 11:32:03] 2025-10-12 15:30:49,440 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 11:32:03] 2025-10-12 15:30:50,982 | INFO     | monitor loop #354: job 0:6839636973 is in state 'finished'
[2025-10-12 11:32:03] 2025-10-12 15:30:50,982 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 11:32:03] 2025-10-12 15:30:51,269 | INFO     | time since job start (5166s) is within the limit (172800.0s)
[2025-10-12 11:32:03] 2025-10-12 15:30:53,294 | INFO     | time since job start (5168s) is within the limit (172800.0s)
[2025-10-12 11:32:03] 2025-10-12 15:30:53,487 | INFO     | monitor loop #355: job 0:6839636973 is in state 'finished'
[2025-10-12 11:32:03] 2025-10-12 15:30:53,487 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 11:32:03] 2025-10-12 15:30:55,317 | INFO     | time since job start (5170s) is within the limit (172800.0s)
[2025-10-12 11:32:03] 2025-10-12 15:30:55,998 | INFO     | monitor loop #356: job 0:6839636973 is in state 'finished'
[2025-10-12 11:32:03] 2025-10-12 15:30:55,998 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 11:32:03] 2025-10-12 15:30:57,338 | INFO     | time since job start (5172s) is within the limit (172800.0s)
[2025-10-12 11:32:03] 2025-10-12 15:30:58,518 | INFO     | monitor loop #357: job 0:6839636973 is in state 'finished'
[2025-10-12 11:32:03] 2025-10-12 15:30:58,518 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 11:32:03] 2025-10-12 15:30:59,359 | INFO     | time since job start (5174s) is within the limit (172800.0s)
[2025-10-12 11:32:03] 2025-10-12 15:31:01,023 | INFO     | monitor loop #358: job 0:6839636973 is in state 'finished'
[2025-10-12 11:32:03] 2025-10-12 15:31:01,023 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 11:32:03] 2025-10-12 15:31:01,366 | INFO     | time since job start (5176s) is within the limit (172800.0s)
[2025-10-12 11:32:03] 2025-10-12 15:31:03,379 | INFO     | time since job start (5178s) is within the limit (172800.0s)
[2025-10-12 11:32:03] 2025-10-12 15:31:03,538 | INFO     | monitor loop #359: job 0:6839636973 is in state 'finished'
[2025-10-12 11:32:03] 2025-10-12 15:31:03,538 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 11:32:03] 2025-10-12 15:31:05,386 | INFO     | time since job start (5180s) is within the limit (172800.0s)
[2025-10-12 11:32:03] 2025-10-12 15:31:06,043 | INFO     | monitor loop #360: job 0:6839636973 is in state 'finished'
[2025-10-12 11:32:03] 2025-10-12 15:31:06,043 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 11:32:03] 2025-10-12 15:31:07,401 | INFO     | time since job start (5182s) is within the limit (172800.0s)
[2025-10-12 11:32:03] 2025-10-12 15:31:08,557 | INFO     | monitor loop #361: job 0:6839636973 is in state 'finished'
[2025-10-12 11:32:03] 2025-10-12 15:31:08,557 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 11:32:03] 2025-10-12 15:31:09,415 | INFO     | PID=2211923 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 11:32:03] 2025-10-12 15:31:09,415 | INFO     | .. there are 29 such processes running
[2025-10-12 11:32:03] 2025-10-12 15:31:10,416 | INFO     | time since job start (5185s) is within the limit (172800.0s)
[2025-10-12 11:32:03] 2025-10-12 15:31:11,063 | INFO     | monitor loop #362: job 0:6839636973 is in state 'finished'
[2025-10-12 11:32:03] 2025-10-12 15:31:11,063 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 11:32:03] 2025-10-12 15:31:12,423 | INFO     | time since job start (5187s) is within the limit (172800.0s)
[2025-10-12 11:32:03] 2025-10-12 15:31:12,645 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-12 11:32:03] 2025-10-12 15:31:12,653 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3676.8888515625
[2025-10-12 11:32:03] 2025-10-12 15:31:12,667 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6839636973/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 11:32:03] 2025-10-12 15:31:12,667 | INFO     | extracted standard info from prmon json
[2025-10-12 11:32:03] 2025-10-12 15:31:12,668 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 11:32:03] 2025-10-12 15:31:12,668 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 11:32:03] 2025-10-12 15:31:12,668 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 11:32:03] 2025-10-12 15:31:12,668 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 11:32:03] 2025-10-12 15:31:12,669 | INFO     | fitting pss+swap vs Time
[2025-10-12 11:32:03] 2025-10-12 15:31:12,669 | INFO     | sum of square deviations: 130804254.88000003
[2025-10-12 11:32:03] 2025-10-12 15:31:12,670 | INFO     | sum of deviations: 11979552000.439999
[2025-10-12 11:32:03] 2025-10-12 15:31:12,670 | INFO     | mean x: 1760280632.04
[2025-10-12 11:32:03] 2025-10-12 15:31:12,670 | INFO     | mean y: 2471155.8533333335
[2025-10-12 11:32:03] 2025-10-12 15:31:12,670 | INFO     | -- intersect: -161210735449.97266
[2025-10-12 11:32:03] 2025-10-12 15:31:12,670 | INFO     | intersect: -161210735449.97266
[2025-10-12 11:32:03] 2025-10-12 15:31:12,670 | INFO     | chi2: 1.2145715833364696
[2025-10-12 11:32:03] 2025-10-12 15:31:12,670 | INFO     | -- intersect: -161210735449.97266
[2025-10-12 11:32:03] 2025-10-12 15:31:12,670 | INFO     | current memory leak: 91.58 B/s (using 75 data points, chi2=1.21)
[2025-10-12 11:32:03] 2025-10-12 15:31:12,670 | INFO     | could have reported an average CPU frequency of 3685 MHz (6 samples)
[2025-10-12 11:32:03] 2025-10-12 15:31:12,670 | INFO     | ..............................
[2025-10-12 11:32:03] 2025-10-12 15:31:12,670 | INFO     | . Timing measurements:
[2025-10-12 11:32:03] 2025-10-12 15:31:12,670 | INFO     | . get job = 0 s
[2025-10-12 11:32:03] 2025-10-12 15:31:12,670 | INFO     | . initial setup = 7 s
[2025-10-12 11:32:03] 2025-10-12 15:31:12,670 | INFO     | . payload setup = 43 s
[2025-10-12 11:32:03] 2025-10-12 15:31:12,670 | INFO     | . stage-in = 0 s
[2025-10-12 11:32:03] 2025-10-12 15:31:12,670 | INFO     | . payload execution = 5002 s
[2025-10-12 11:32:03] 2025-10-12 15:31:12,671 | INFO     | . stage-out = 2 s
[2025-10-12 11:32:03] 2025-10-12 15:31:12,671 | INFO     | . log creation = 0 s
[2025-10-12 11:32:03] 2025-10-12 15:31:12,671 | INFO     | ..............................
[2025-10-12 11:32:03] 2025-10-12 15:31:12,727 | INFO     | 
[2025-10-12 11:32:03] 2025-10-12 15:31:12,727 | INFO     | job summary report
[2025-10-12 11:32:03] 2025-10-12 15:31:12,727 | INFO     | --------------------------------------------------
[2025-10-12 11:32:03] 2025-10-12 15:31:12,727 | INFO     | PanDA job id: 6839636973
[2025-10-12 11:32:03] 2025-10-12 15:31:12,727 | INFO     | task id: 46676269
[2025-10-12 11:32:03] 2025-10-12 15:31:12,727 | INFO     | errors: (none)
[2025-10-12 11:32:03] 2025-10-12 15:31:12,727 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 11:32:03] 2025-10-12 15:31:12,727 | INFO     | pilot state: finished 
[2025-10-12 11:32:03] 2025-10-12 15:31:12,727 | INFO     | transexitcode: 0
[2025-10-12 11:32:03] 2025-10-12 15:31:12,727 | INFO     | exeerrorcode: 0
[2025-10-12 11:32:03] 2025-10-12 15:31:12,727 | INFO     | exeerrordiag: 
[2025-10-12 11:32:03] 2025-10-12 15:31:12,728 | INFO     | exitcode: 0
[2025-10-12 11:32:03] 2025-10-12 15:31:12,728 | INFO     | exitmsg: OK
[2025-10-12 11:32:03] 2025-10-12 15:31:12,728 | INFO     | cpuconsumptiontime: 25021 s
[2025-10-12 11:32:03] 2025-10-12 15:31:12,728 | INFO     | nevents: 400
[2025-10-12 11:32:03] 2025-10-12 15:31:12,728 | INFO     | neventsw: 0
[2025-10-12 11:32:03] 2025-10-12 15:31:12,728 | INFO     | pid: 2232916
[2025-10-12 11:32:03] 2025-10-12 15:31:12,728 | INFO     | pgrp: 2232916
[2025-10-12 11:32:03] 2025-10-12 15:31:12,728 | INFO     | corecount: 8
[2025-10-12 11:32:03] 2025-10-12 15:31:12,728 | INFO     | event service: False
[2025-10-12 11:32:03] 2025-10-12 15:31:12,728 | INFO     | sizes: {0: 2348580, 1: 2348636, 2: 2348863, 3: 2348863, 14: 2348891, 24: 2348919, 37: 2349075, 47: 2349103, 58: 2349159, 60: 2349449, 69: 2349477, 5049: 2376145, 5
[2025-10-12 11:32:03] 2025-10-12 15:31:12,728 | INFO     | --------------------------------------------------
[2025-10-12 11:32:03] 2025-10-12 15:31:12,728 | INFO     | 
[2025-10-12 11:32:03] 2025-10-12 15:31:12,728 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-10-12 11:32:03] 2025-10-12 15:31:12,852 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 11:32:03] 2025-10-12 15:31:12,853 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 11:32:03] 2025-10-12 15:31:12,853 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 11:32:03] 2025-10-12 15:31:12,853 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 11:32:03] 2025-10-12 15:31:12,853 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 11:32:03] 2025-10-12 15:31:12,853 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 11:32:03] 2025-10-12 15:31:12,853 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 11:32:03] 2025-10-12 15:31:12,853 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 11:32:03] 2025-10-12 15:31:12,853 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 11:32:03] 2025-10-12 15:31:12,853 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 11:32:03] 2025-10-12 15:31:12,853 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 11:32:03] 2025-10-12 15:31:12,853 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 11:32:03] 2025-10-12 15:31:12,853 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 11:32:03] 2025-10-12 15:31:12,853 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 11:32:03] 2025-10-12 15:31:12,853 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 11:32:03] 2025-10-12 15:31:12,853 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 11:32:03] 2025-10-12 15:31:12,853 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 11:32:03] 2025-10-12 15:31:12,853 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 11:32:03] 2025-10-12 15:31:12,853 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 11:32:03] 2025-10-12 15:31:12,853 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 11:32:03] 2025-10-12 15:31:12,854 | INFO     | job 6839636973 has completed (purged errors)
[2025-10-12 11:32:03] 2025-10-12 15:31:12,854 | INFO     | overall cleanup function is called
[2025-10-12 11:32:03] 2025-10-12 15:31:13,878 | INFO     | --- collectZombieJob: --- 10, [2232916]
[2025-10-12 11:32:03] 2025-10-12 15:31:13,881 | INFO     | zombie collector waiting for pid 2232916
[2025-10-12 11:32:03] 2025-10-12 15:31:13,881 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 11:32:03] 2025-10-12 15:31:13,881 | INFO     | collected zombie processes
[2025-10-12 11:32:03] 2025-10-12 15:31:13,881 | INFO     | will attempt to kill all subprocesses of pid=2232916
[2025-10-12 11:32:03] 2025-10-12 15:31:15,388 | INFO     | process IDs to be killed: [2232916] (in reverse order)
[2025-10-12 11:32:03] 2025-10-12 15:31:15,557 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 11:32:03] 2025-10-12 15:31:15,557 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 11:32:03] 2025-10-12 15:31:15,580 | INFO     | did not find any defunct processes belonging to 2232916
[2025-10-12 11:32:03] 2025-10-12 15:31:15,602 | INFO     | did not find any defunct processes belonging to 2232916
[2025-10-12 11:32:03] 2025-10-12 15:31:15,602 | INFO     | ready for new job
[2025-10-12 11:32:03] 2025-10-12 15:31:15,606 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 11:32:03] 2025-10-12 15:31:15,608 | INFO     | ***************************************
[2025-10-12 11:32:03] 2025-10-12 15:31:15,608 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 11:32:03] 2025-10-12 15:31:15,608 | INFO     | ***************************************
[2025-10-12 11:32:03] 2025-10-12 15:31:15,608 | INFO     | 
[2025-10-12 11:32:03] 2025-10-12 15:31:15,656 | INFO     | architecture information:
[2025-10-12 11:32:03] 2025-10-12 15:31:15,664 | INFO     | executing command: cat /etc/os-release
[2025-10-12 11:32:03] 2025-10-12 15:31:15,772 | INFO     | cat /etc/os-release:
[2025-10-12 11:32:03] NAME="CentOS Linux"
[2025-10-12 11:32:03] VERSION="7 (Core)"
[2025-10-12 11:32:03] ID="centos"
[2025-10-12 11:32:03] ID_LIKE="rhel fedora"
[2025-10-12 11:32:03] VERSION_ID="7"
[2025-10-12 11:32:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 11:32:03] ANSI_COLOR="0;31"
[2025-10-12 11:32:03] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 11:32:03] HOME_URL="https://www.centos.org/"
[2025-10-12 11:32:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 11:32:03] 
[2025-10-12 11:32:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 11:32:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 11:32:03] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 11:32:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 11:32:03] 
[2025-10-12 11:32:03] 2025-10-12 15:31:15,772 | INFO     | ***************************************
[2025-10-12 11:32:03] 2025-10-12 15:31:16,276 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-10-12 11:32:03] 2025-10-12 15:31:16,394 | INFO     | sufficient remaining disk space (170699784192 B)
[2025-10-12 11:32:03] 2025-10-12 15:31:16,394 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 11:32:03] 2025-10-12 15:31:16,395 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 11:32:03] 2025-10-12 15:31:16,395 | INFO     | update_server=False
[2025-10-12 11:32:03] 2025-10-12 15:31:16,395 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 11:32:03] 2025-10-12 15:31:16,447 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 11:32:03] 2025-10-12 15:31:16,568 | INFO     | all data control threads have been joined
[2025-10-12 11:32:03] 2025-10-12 15:31:17,129 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 11:32:03] 2025-10-12 15:31:17,129 | INFO     | aborting loop
[2025-10-12 11:32:03] 2025-10-12 15:31:17,401 | INFO     | [job] retrieve thread has finished
[2025-10-12 11:32:03] 2025-10-12 15:31:17,426 | INFO     | all job control threads have been joined
[2025-10-12 11:32:03] 2025-10-12 15:31:17,575 | INFO     | [data] control thread has finished
[2025-10-12 11:32:03] 2025-10-12 15:31:17,754 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 11:32:03] 2025-10-12 15:31:17,818 | INFO     | all payload control threads have been joined
[2025-10-12 11:32:03] 2025-10-12 15:31:17,819 | INFO     | [payload] failed_post thread has finished
[2025-10-12 11:32:03] 2025-10-12 15:31:18,135 | INFO     | [job] job monitor thread has finished
[2025-10-12 11:32:03] 2025-10-12 15:31:18,437 | INFO     | [job] control thread has finished
[2025-10-12 11:32:03] 2025-10-12 15:31:18,449 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 11:32:03] 2025-10-12 15:31:18,454 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 11:32:03] 2025-10-12 15:31:18,454 | INFO     | [data] copytool_out thread has finished
[2025-10-12 11:32:03] 2025-10-12 15:31:18,462 | INFO     | [data] copytool_in thread has finished
[2025-10-12 11:32:03] 2025-10-12 15:31:18,463 | INFO     | [job] validate thread has finished
[2025-10-12 11:32:03] 2025-10-12 15:31:18,601 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 11:32:03] 2025-10-12 15:31:18,650 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 11:32:03] 2025-10-12 15:31:18,703 | INFO     | [payload] validate_post thread has finished
[2025-10-12 11:32:03] 2025-10-12 15:31:18,760 | INFO     | [job] queue monitor thread has finished
[2025-10-12 11:32:03] 2025-10-12 15:31:18,824 | INFO     | [payload] control thread has finished
[2025-10-12 11:32:03] 2025-10-12 15:31:19,496 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 11:32:03] 2025-10-12 15:31:23,505 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 11:32:03] 2025-10-12 15:31:46,695 | INFO     | PID=2211923 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 11:32:03] 2025-10-12 15:31:46,725 | INFO     | .. there are 29 such processes running
[2025-10-12 11:32:03] 2025-10-12 15:31:46,726 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 11:32:03] 2025-10-12 15:31:46,726 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 11:32:03] 2025-10-12 15:31:46,726 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 11:32:03] 2025-10-12 15:31:54,072 | INFO     | [monitor] cgroup control has ended
[2025-10-12 11:32:03] 2025-10-12 15:31:55,078 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140128459478848)>', '<ExcThread(monitor, started 140127955293952)>']
[2025-10-12 11:32:03] 2025-10-12 15:31:55,821 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 11:32:03] 2025-10-12 15:31:55,821 | INFO     | [monitor] control thread has ended
[2025-10-12 11:32:03] 2025-10-12 15:32:00,105 | INFO     | all workflow threads have been joined
[2025-10-12 11:32:03] 2025-10-12 15:32:00,105 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 11:32:03] 2025-10-12 15:32:00,105 | INFO     | traces error code: 0
[2025-10-12 11:32:03] 2025-10-12 15:32:00,106 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 11:32:03] 2025-10-12 15:32:01,873 [wrapper] ==== pilot stdout END ====
[2025-10-12 11:32:03] 2025-10-12 15:32:01,885 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 11:32:03] 2025-10-12 15:32:01,903 [wrapper] pilotpid: 2211923
[2025-10-12 11:32:03] 2025-10-12 15:32:01,914 [wrapper] Pilot exit status: 0
[2025-10-12 11:32:03] 2025-10-12 15:32:02,010 [wrapper] pandaids: 6839636973
[2025-10-12 11:32:03] 2025-10-12 15:32:02,334 [wrapper] cleanup supervisor_pilot 2447005 2211924
[2025-10-12 11:32:03] 2025-10-12 15:32:02,353 [wrapper] Test setup, not cleaning
[2025-10-12 11:32:03] 2025-10-12 15:32:02,407 [wrapper] apfmon messages muted
[2025-10-12 11:32:03] 2025-10-12 15:32:02,438 [wrapper] ==== wrapper stdout END ====
[2025-10-12 11:32:03] 2025-10-12 15:32:02,478 [wrapper] ==== wrapper stderr END ====
[2025-10-12 11:32:03]  *** Error codes and diagnostics ***
[2025-10-12 11:32:03]     "exeErrorCode": 0,
[2025-10-12 11:32:03]     "exeErrorDiag": "",
[2025-10-12 11:32:03]     "pilotErrorCode": 0,
[2025-10-12 11:32:03]     "pilotErrorDiag": "",
[2025-10-12 11:32:03]  *** Listing of results directory ***
[2025-10-12 11:32:03] total 410204
[2025-10-12 11:32:03] -rwx------. 1 boincer umatlas     36292 Oct 12 02:54 runpilot2-wrapper.sh
[2025-10-12 11:32:03] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 02:54 queuedata.json
[2025-10-12 11:32:03] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 02:54 pilot3.tar.gz
[2025-10-12 11:32:03] -rw-r--r--. 1 boincer umatlas       100 Oct 12 10:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 11:32:03] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 10:03 run_atlas
[2025-10-12 11:32:03] -rw-r--r--. 1 boincer umatlas       105 Oct 12 10:03 job.xml
[2025-10-12 11:32:03] -rw-r--r--. 2 boincer umatlas 219475066 Oct 12 10:03 EVNT.46676267._001322.pool.root.1
[2025-10-12 11:32:03] -rw-r--r--. 2 boincer umatlas    569673 Oct 12 10:03 input.tar.gz
[2025-10-12 11:32:03] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 10:03 start_atlas.sh
[2025-10-12 11:32:03] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 10:03 shared
[2025-10-12 11:32:03] -rw-r--r--. 1 boincer umatlas         0 Oct 12 10:03 boinc_lockfile
[2025-10-12 11:32:03] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 10:03 pandaJob.out
[2025-10-12 11:32:03] -rw-------. 1 boincer umatlas    975528 Oct 12 10:04 agis_schedconf.cvmfs.json
[2025-10-12 11:32:03] -rw-------. 1 boincer umatlas   1560580 Oct 12 10:04 agis_ddmendpoints.agis.ALL.json
[2025-10-12 11:32:03] drwx------. 5 boincer umatlas      4096 Oct 12 10:04 pilot3
[2025-10-12 11:32:03] -rw-r--r--. 1 boincer umatlas      7174 Oct 12 11:29 init_data.xml
[2025-10-12 11:32:03] -rw-------. 1 boincer umatlas 194602247 Oct 12 11:29 HITS.46676269._073231.pool.root.1
[2025-10-12 11:32:03] -rw-r--r--. 1 boincer umatlas       529 Oct 12 11:29 boinc_task_state.xml
[2025-10-12 11:32:03] -rw-------. 1 boincer umatlas      1046 Oct 12 11:30 memory_monitor_summary.json
[2025-10-12 11:32:03] -rw-------. 1 boincer umatlas    331551 Oct 12 11:30 log.46676269._073231.job.log.tgz.1
[2025-10-12 11:32:03] -rw-------. 1 boincer umatlas      7808 Oct 12 11:31 heartbeat.json
[2025-10-12 11:32:03] -rw-------. 1 boincer umatlas        95 Oct 12 11:31 pilot_heartbeat.json
[2025-10-12 11:32:03] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 11:31 boinc_mmap_file
[2025-10-12 11:32:03] -rw-------. 1 boincer umatlas      4825 Oct 12 11:32 pilotlog.txt
[2025-10-12 11:32:03] -rw-r--r--. 1 boincer umatlas        27 Oct 12 11:32 wrapper_checkpoint.txt
[2025-10-12 11:32:03] -rw-------. 1 boincer umatlas    702901 Oct 12 11:32 log.46676269._073231.job.log.1
[2025-10-12 11:32:03] -rw-------. 1 boincer umatlas       357 Oct 12 11:32 output.list
[2025-10-12 11:32:03] -rw-r--r--. 1 boincer umatlas       620 Oct 12 11:32 runtime_log
[2025-10-12 11:32:03] -rw-------. 1 boincer umatlas   1054720 Oct 12 11:32 result.tar.gz
[2025-10-12 11:32:03] -rw-r--r--. 1 boincer umatlas      8703 Oct 12 11:32 runtime_log.err
[2025-10-12 11:32:03] -rw-------. 1 boincer umatlas       657 Oct 12 11:32 rQHMDml94R8n9Rq4apOajLDm4fhM0noT9bVof3QYDm2PTMDmbV4Onm.diag
[2025-10-12 11:32:03] -rw-r--r--. 1 boincer umatlas     22371 Oct 12 11:32 stderr.txt
[2025-10-12 11:32:03] HITS file was successfully produced:
[2025-10-12 11:32:03] -rw-------. 1 boincer umatlas 194602247 Oct 12 11:29 shared/HITS.pool.root.1
[2025-10-12 11:32:03]  *** Contents of shared directory: ***
[2025-10-12 11:32:03] total 405988
[2025-10-12 11:32:03] -rw-r--r--. 2 boincer umatlas 219475066 Oct 12 10:03 ATLAS.root_0
[2025-10-12 11:32:03] -rw-r--r--. 2 boincer umatlas    569673 Oct 12 10:03 input.tar.gz
[2025-10-12 11:32:03] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 10:03 start_atlas.sh
[2025-10-12 11:32:03] -rw-------. 1 boincer umatlas 194602247 Oct 12 11:29 HITS.pool.root.1
[2025-10-12 11:32:03] -rw-------. 1 boincer umatlas   1054720 Oct 12 11:32 result.tar.gz
11:32:04 (2204280): run_atlas exited; CPU time 25184.781166
11:32:04 (2204280): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN