Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
10:06:44 (22631): wrapper (7.7.26015): starting
10:06:44 (22631): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 10:06:44] Arguments: --nthreads 8
[2025-10-12 10:06:44] Threads: 8
[2025-10-12 10:06:44] Checking for CVMFS
[2025-10-12 10:06:44] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 10:06:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 10:06:44] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 10:06:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 10:06:45] 2.11.2.0 3213 627917 247588 151622 1 56 10688583 20275201 93 130560 1 358977116 99.992 26067257 20173 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 10:06:45] CVMFS is ok
[2025-10-12 10:06:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 10:06:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 10:06:45] Further information can be found at the LHC@home message board.
[2025-10-12 10:06:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 10:06:45] Checking for apptainer binary...
[2025-10-12 10:06:45] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 10:06:45] Running /usr/bin/apptainer --version
[2025-10-12 10:06:45] apptainer version 1.3.2-1.el7
[2025-10-12 10:06:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 10:06:46] c-205-38.aglt2.org
[2025-10-12 10:06:46] apptainer works
[2025-10-12 10:06:46] Set ATHENA_PROC_NUMBER=8
[2025-10-12 10:06:46] Set ATHENA_CORE_NUMBER=8
[2025-10-12 10:06:46] Starting ATLAS job with PandaID=6839660014
[2025-10-12 10:06:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 11:02:09]  *** The last 200 lines of the pilot log: ***
[2025-10-12 11:02:09]  storage_token=
[2025-10-12 11:02:09]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6839660014/log.46676269._073786.job.log.tgz.1
[2025-10-12 11:02:09]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/78/ab/log.46676269._073786.job.log.tgz.1
[2025-10-12 11:02:09]  workdir=None
[2025-10-12 11:02:09] ]
[2025-10-12 11:02:09] 2025-10-12 15:01:07,604 | INFO     | transferring file log.46676269._073786.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6839660014/log.46676269._073786.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-12 11:02:09] 2025-10-12 15:01:07,604 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6839660014/log.46676269._073786.job.log.tgz.1 /tmp/boinchome/slots/0/log.46676269._073786.job
[2025-10-12 11:02:09] 2025-10-12 15:01:07,623 | INFO     | adding to output.list: log.46676269._073786.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/78/ab/log.46676269._073786.job.log.tg
[2025-10-12 11:02:09] 2025-10-12 15:01:07,624 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 11:02:09] 2025-10-12 15:01:07,624 | INFO     | summary of transferred files:
[2025-10-12 11:02:09] 2025-10-12 15:01:07,624 | INFO     |  -- lfn=log.46676269._073786.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 11:02:09] 2025-10-12 15:01:07,624 | INFO     | stage-out finished correctly
[2025-10-12 11:02:09] 2025-10-12 15:01:08,517 | INFO     | monitor loop #248: job 0:6839660014 is in state 'finished'
[2025-10-12 11:02:09] 2025-10-12 15:01:08,518 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 11:02:09] 2025-10-12 15:01:08,913 | INFO     | time since job start (3250s) is within the limit (172800.0s)
[2025-10-12 11:02:09] 2025-10-12 15:01:10,882 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 11:02:09] 2025-10-12 15:01:10,924 | INFO     | time since job start (3252s) is within the limit (172800.0s)
[2025-10-12 11:02:09] 2025-10-12 15:01:11,021 | INFO     | monitor loop #249: job 0:6839660014 is in state 'finished'
[2025-10-12 11:02:09] 2025-10-12 15:01:11,021 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 11:02:09] 2025-10-12 15:01:12,940 | INFO     | time since job start (3254s) is within the limit (172800.0s)
[2025-10-12 11:02:09] 2025-10-12 15:01:13,193 | INFO     | job 6839660014 has state=finished
[2025-10-12 11:02:09] 2025-10-12 15:01:13,193 | INFO     | preparing for final server update for job 6839660014 in state='finished'
[2025-10-12 11:02:09] 2025-10-12 15:01:13,194 | INFO     | this job has now completed (state=finished)
[2025-10-12 11:02:09] 2025-10-12 15:01:13,194 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 11:02:09] 2025-10-12 15:01:13,194 | INFO     | log transfer has been attempted: DONE
[2025-10-12 11:02:09] 2025-10-12 15:01:13,195 | INFO     | job 6839660014 has finished - writing final server update
[2025-10-12 11:02:09] 2025-10-12 15:01:13,195 | INFO     | total number of processed events: 400 (read)
[2025-10-12 11:02:09] 2025-10-12 15:01:13,196 | INFO     | executing command: lscpu
[2025-10-12 11:02:09] 2025-10-12 15:01:13,226 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 11:02:09] 2025-10-12 15:01:13,523 | INFO     | monitor loop #250: job 0:6839660014 is in state 'finished'
[2025-10-12 11:02:09] 2025-10-12 15:01:13,524 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 11:02:09] 2025-10-12 15:01:14,945 | INFO     | time since job start (3256s) is within the limit (172800.0s)
[2025-10-12 11:02:09] 2025-10-12 15:01:16,026 | INFO     | monitor loop #251: job 0:6839660014 is in state 'finished'
[2025-10-12 11:02:09] 2025-10-12 15:01:16,026 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 11:02:09] 2025-10-12 15:01:16,563 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-12 11:02:09] 2025-10-12 15:01:16,567 | INFO     | found 16 cores (8 cores per socket, 2 sockets) , CPU MHz: 2771.2153749999998
[2025-10-12 11:02:09] 2025-10-12 15:01:16,570 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6839660014/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 11:02:09] 2025-10-12 15:01:16,571 | INFO     | extracted standard info from prmon json
[2025-10-12 11:02:09] 2025-10-12 15:01:16,572 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 11:02:09] 2025-10-12 15:01:16,572 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 11:02:09] 2025-10-12 15:01:16,572 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 11:02:09] 2025-10-12 15:01:16,572 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 11:02:09] 2025-10-12 15:01:16,574 | INFO     | fitting pss+swap vs Time
[2025-10-12 11:02:09] 2025-10-12 15:01:16,574 | INFO     | sum of square deviations: 30168007.5
[2025-10-12 11:02:09] 2025-10-12 15:01:16,574 | INFO     | sum of deviations: -242320609.0000001
[2025-10-12 11:02:09] 2025-10-12 15:01:16,575 | INFO     | mean x: 1760279720.5
[2025-10-12 11:02:09] 2025-10-12 15:01:16,575 | INFO     | mean y: 2523709.8695652173
[2025-10-12 11:02:09] 2025-10-12 15:01:16,575 | INFO     | -- intersect: 14141742346.761974
[2025-10-12 11:02:09] 2025-10-12 15:01:16,575 | INFO     | intersect: 14141742346.761974
[2025-10-12 11:02:09] 2025-10-12 15:01:16,575 | INFO     | chi2: 0.007306847086446391
[2025-10-12 11:02:09] 2025-10-12 15:01:16,575 | INFO     | -- intersect: 14141742346.761974
[2025-10-12 11:02:09] 2025-10-12 15:01:16,575 | INFO     | current memory leak: -8.03 B/s (using 46 data points, chi2=0.01)
[2025-10-12 11:02:09] 2025-10-12 15:01:16,576 | INFO     | could have reported an average CPU frequency of 2217 MHz (5 samples)
[2025-10-12 11:02:09] 2025-10-12 15:01:16,576 | INFO     | ..............................
[2025-10-12 11:02:09] 2025-10-12 15:01:16,576 | INFO     | . Timing measurements:
[2025-10-12 11:02:09] 2025-10-12 15:01:16,576 | INFO     | . get job = 0 s
[2025-10-12 11:02:09] 2025-10-12 15:01:16,576 | INFO     | . initial setup = 2 s
[2025-10-12 11:02:09] 2025-10-12 15:01:16,576 | INFO     | . payload setup = 6 s
[2025-10-12 11:02:09] 2025-10-12 15:01:16,577 | INFO     | . stage-in = 0 s
[2025-10-12 11:02:09] 2025-10-12 15:01:16,577 | INFO     | . payload execution = 3222 s
[2025-10-12 11:02:09] 2025-10-12 15:01:16,577 | INFO     | . stage-out = 0 s
[2025-10-12 11:02:09] 2025-10-12 15:01:16,577 | INFO     | . log creation = 0 s
[2025-10-12 11:02:09] 2025-10-12 15:01:16,577 | INFO     | ..............................
[2025-10-12 11:02:09] 2025-10-12 15:01:16,654 | INFO     | 
[2025-10-12 11:02:09] 2025-10-12 15:01:16,655 | INFO     | job summary report
[2025-10-12 11:02:09] 2025-10-12 15:01:16,655 | INFO     | --------------------------------------------------
[2025-10-12 11:02:09] 2025-10-12 15:01:16,655 | INFO     | PanDA job id: 6839660014
[2025-10-12 11:02:09] 2025-10-12 15:01:16,655 | INFO     | task id: 46676269
[2025-10-12 11:02:09] 2025-10-12 15:01:16,655 | INFO     | errors: (none)
[2025-10-12 11:02:09] 2025-10-12 15:01:16,655 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 11:02:09] 2025-10-12 15:01:16,655 | INFO     | pilot state: finished 
[2025-10-12 11:02:09] 2025-10-12 15:01:16,655 | INFO     | transexitcode: 0
[2025-10-12 11:02:09] 2025-10-12 15:01:16,656 | INFO     | exeerrorcode: 0
[2025-10-12 11:02:09] 2025-10-12 15:01:16,656 | INFO     | exeerrordiag: 
[2025-10-12 11:02:09] 2025-10-12 15:01:16,656 | INFO     | exitcode: 0
[2025-10-12 11:02:09] 2025-10-12 15:01:16,656 | INFO     | exitmsg: OK
[2025-10-12 11:02:09] 2025-10-12 15:01:16,656 | INFO     | cpuconsumptiontime: 23516 s
[2025-10-12 11:02:09] 2025-10-12 15:01:16,656 | INFO     | nevents: 400
[2025-10-12 11:02:09] 2025-10-12 15:01:16,656 | INFO     | neventsw: 0
[2025-10-12 11:02:09] 2025-10-12 15:01:16,656 | INFO     | pid: 320
[2025-10-12 11:02:09] 2025-10-12 15:01:16,656 | INFO     | pgrp: 320
[2025-10-12 11:02:09] 2025-10-12 15:01:16,656 | INFO     | corecount: 8
[2025-10-12 11:02:09] 2025-10-12 15:01:16,657 | INFO     | event service: False
[2025-10-12 11:02:09] 2025-10-12 15:01:16,657 | INFO     | sizes: {0: 2348857, 4: 2349119, 11: 2349147, 3232: 2374691, 3233: 2383689, 3237: 2383745, 3242: 2384099}
[2025-10-12 11:02:09] 2025-10-12 15:01:16,657 | INFO     | --------------------------------------------------
[2025-10-12 11:02:09] 2025-10-12 15:01:16,657 | INFO     | 
[2025-10-12 11:02:09] 2025-10-12 15:01:16,657 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 11:02:09] 2025-10-12 15:01:16,676 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 11:02:09] 2025-10-12 15:01:16,677 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 11:02:09] 2025-10-12 15:01:16,677 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 11:02:09] 2025-10-12 15:01:16,677 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 11:02:09] 2025-10-12 15:01:16,677 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 11:02:09] 2025-10-12 15:01:16,677 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 11:02:09] 2025-10-12 15:01:16,677 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 11:02:09] 2025-10-12 15:01:16,677 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 11:02:09] 2025-10-12 15:01:16,677 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 11:02:09] 2025-10-12 15:01:16,678 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 11:02:09] 2025-10-12 15:01:16,678 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 11:02:09] 2025-10-12 15:01:16,678 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 11:02:09] 2025-10-12 15:01:16,678 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 11:02:09] 2025-10-12 15:01:16,678 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 11:02:09] 2025-10-12 15:01:16,678 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 11:02:09] 2025-10-12 15:01:16,678 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 11:02:09] 2025-10-12 15:01:16,678 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 11:02:09] 2025-10-12 15:01:16,678 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 11:02:09] 2025-10-12 15:01:16,679 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 11:02:09] 2025-10-12 15:01:16,679 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 11:02:09] 2025-10-12 15:01:16,679 | INFO     | job 6839660014 has completed (purged errors)
[2025-10-12 11:02:09] 2025-10-12 15:01:16,679 | INFO     | overall cleanup function is called
[2025-10-12 11:02:09] 2025-10-12 15:01:17,685 | INFO     | --- collectZombieJob: --- 10, [320]
[2025-10-12 11:02:09] 2025-10-12 15:01:17,685 | INFO     | zombie collector waiting for pid 320
[2025-10-12 11:02:09] 2025-10-12 15:01:17,686 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 11:02:09] 2025-10-12 15:01:17,686 | INFO     | collected zombie processes
[2025-10-12 11:02:09] 2025-10-12 15:01:17,686 | INFO     | will attempt to kill all subprocesses of pid=320
[2025-10-12 11:02:09] 2025-10-12 15:01:17,773 | INFO     | process IDs to be killed: [320] (in reverse order)
[2025-10-12 11:02:09] 2025-10-12 15:01:17,823 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 11:02:09] 2025-10-12 15:01:17,824 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 11:02:09] 2025-10-12 15:01:17,827 | INFO     | did not find any defunct processes belonging to 320
[2025-10-12 11:02:09] 2025-10-12 15:01:17,829 | INFO     | did not find any defunct processes belonging to 320
[2025-10-12 11:02:09] 2025-10-12 15:01:17,829 | INFO     | ready for new job
[2025-10-12 11:02:09] 2025-10-12 15:01:17,830 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 11:02:09] 2025-10-12 15:01:17,831 | INFO     | ***************************************
[2025-10-12 11:02:09] 2025-10-12 15:01:17,832 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 11:02:09] 2025-10-12 15:01:17,832 | INFO     | ***************************************
[2025-10-12 11:02:09] 2025-10-12 15:01:17,832 | INFO     | 
[2025-10-12 11:02:09] 2025-10-12 15:01:17,833 | INFO     | architecture information:
[2025-10-12 11:02:09] 2025-10-12 15:01:17,833 | INFO     | executing command: cat /etc/os-release
[2025-10-12 11:02:09] 2025-10-12 15:01:17,848 | INFO     | cat /etc/os-release:
[2025-10-12 11:02:09] NAME="CentOS Linux"
[2025-10-12 11:02:09] VERSION="7 (Core)"
[2025-10-12 11:02:09] ID="centos"
[2025-10-12 11:02:09] ID_LIKE="rhel fedora"
[2025-10-12 11:02:09] VERSION_ID="7"
[2025-10-12 11:02:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 11:02:09] ANSI_COLOR="0;31"
[2025-10-12 11:02:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 11:02:09] HOME_URL="https://www.centos.org/"
[2025-10-12 11:02:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 11:02:09] 
[2025-10-12 11:02:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 11:02:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 11:02:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 11:02:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 11:02:09] 
[2025-10-12 11:02:09] 2025-10-12 15:01:17,848 | INFO     | ***************************************
[2025-10-12 11:02:09] 2025-10-12 15:01:18,351 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 11:02:09] 2025-10-12 15:01:18,370 | INFO     | sufficient remaining disk space (32630636544 B)
[2025-10-12 11:02:09] 2025-10-12 15:01:18,370 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 11:02:09] 2025-10-12 15:01:18,371 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 11:02:09] 2025-10-12 15:01:18,371 | INFO     | update_server=False
[2025-10-12 11:02:09] 2025-10-12 15:01:18,371 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 11:02:09] 2025-10-12 15:01:18,371 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 11:02:09] 2025-10-12 15:01:18,371 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 11:02:09] 2025-10-12 15:01:18,484 | INFO     | all data control threads have been joined
[2025-10-12 11:02:09] 2025-10-12 15:01:18,529 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 11:02:09] 2025-10-12 15:01:18,530 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 11:02:09] 2025-10-12 15:01:18,530 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 11:02:09] 2025-10-12 15:01:18,530 | INFO     | will abort loop
[2025-10-12 11:02:09] 2025-10-12 15:01:19,165 | INFO     | all job control threads have been joined
[2025-10-12 11:02:09] 2025-10-12 15:01:19,265 | INFO     | all payload control threads have been joined
[2025-10-12 11:02:09] 2025-10-12 15:01:19,374 | INFO     | [job] queue monitor thread has finished
[2025-10-12 11:02:09] 2025-10-12 15:01:19,376 | INFO     | [job] retrieve thread has finished
[2025-10-12 11:02:09] 2025-10-12 15:01:19,414 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 11:02:09] 2025-10-12 15:01:19,489 | INFO     | [data] control thread has finished
[2025-10-12 11:02:09] 2025-10-12 15:01:19,535 | INFO     | [job] job monitor thread has finished
[2025-10-12 11:02:09] 2025-10-12 15:01:19,758 | INFO     | [job] validate thread has finished
[2025-10-12 11:02:09] 2025-10-12 15:01:19,894 | INFO     | [payload] failed_post thread has finished
[2025-10-12 11:02:09] 2025-10-12 15:01:20,044 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 11:02:09] 2025-10-12 15:01:20,075 | INFO     | [data] copytool_in thread has finished
[2025-10-12 11:02:09] 2025-10-12 15:01:20,127 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 11:02:09] 2025-10-12 15:01:20,170 | INFO     | [job] control thread has finished
[2025-10-12 11:02:09] 2025-10-12 15:01:20,269 | INFO     | [payload] control thread has finished
[2025-10-12 11:02:09] 2025-10-12 15:01:20,376 | INFO     | [data] copytool_out thread has finished
[2025-10-12 11:02:09] 2025-10-12 15:01:20,408 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 11:02:09] 2025-10-12 15:01:20,448 | INFO     | [payload] validate_post thread has finished
[2025-10-12 11:02:09] 2025-10-12 15:01:21,470 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 11:02:09] 2025-10-12 15:01:25,476 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 11:02:09] 2025-10-12 15:01:48,138 | INFO     | PID=26320 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 11:02:09] 2025-10-12 15:01:48,138 | INFO     | .. there are 2 such processes running
[2025-10-12 11:02:09] 2025-10-12 15:01:48,139 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 11:02:09] 2025-10-12 15:01:48,139 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 11:02:09] 2025-10-12 15:01:48,139 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 11:02:09] 2025-10-12 15:02:03,702 | INFO     | [monitor] cgroup control has ended
[2025-10-12 11:02:09] 2025-10-12 15:02:03,950 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139632003053376)>', '<ExcThread(monitor, started 139631567812352)>']
[2025-10-12 11:02:09] 2025-10-12 15:02:04,211 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 11:02:09] 2025-10-12 15:02:04,212 | INFO     | [monitor] control thread has ended
[2025-10-12 11:02:09] 2025-10-12 15:02:08,975 | INFO     | all workflow threads have been joined
[2025-10-12 11:02:09] 2025-10-12 15:02:08,975 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 11:02:09] 2025-10-12 15:02:08,976 | INFO     | traces error code: 0
[2025-10-12 11:02:09] 2025-10-12 15:02:08,976 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 11:02:09] 2025-10-12 15:02:09,067 [wrapper] ==== pilot stdout END ====
[2025-10-12 11:02:09] 2025-10-12 15:02:09,070 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 11:02:09] 2025-10-12 15:02:09,073 [wrapper] pilotpid: 26320
[2025-10-12 11:02:09] 2025-10-12 15:02:09,076 [wrapper] Pilot exit status: 0
[2025-10-12 11:02:09] 2025-10-12 15:02:09,087 [wrapper] pandaids: 6839660014
[2025-10-12 11:02:09] 2025-10-12 15:02:09,122 [wrapper] cleanup supervisor_pilot  5463 26321
[2025-10-12 11:02:09] 2025-10-12 15:02:09,125 [wrapper] Test setup, not cleaning
[2025-10-12 11:02:09] 2025-10-12 15:02:09,128 [wrapper] apfmon messages muted
[2025-10-12 11:02:09] 2025-10-12 15:02:09,131 [wrapper] ==== wrapper stdout END ====
[2025-10-12 11:02:09] 2025-10-12 15:02:09,134 [wrapper] ==== wrapper stderr END ====
[2025-10-12 11:02:09]  *** Error codes and diagnostics ***
[2025-10-12 11:02:09]     "exeErrorCode": 0,
[2025-10-12 11:02:09]     "exeErrorDiag": "",
[2025-10-12 11:02:09]     "pilotErrorCode": 0,
[2025-10-12 11:02:09]     "pilotErrorDiag": "",
[2025-10-12 11:02:09]  *** Listing of results directory ***
[2025-10-12 11:02:09] total 410808
[2025-10-12 11:02:09] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 02:54 pilot3.tar.gz
[2025-10-12 11:02:09] -rwx------ 1 boincer umatlas     36292 Oct 12 03:43 runpilot2-wrapper.sh
[2025-10-12 11:02:09] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 03:43 queuedata.json
[2025-10-12 11:02:09] -rw-r--r-- 1 boincer umatlas       100 Oct 12 10:06 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 11:02:09] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 10:06 run_atlas
[2025-10-12 11:02:09] -rw-r--r-- 1 boincer umatlas       105 Oct 12 10:06 job.xml
[2025-10-12 11:02:09] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 10:06 start_atlas.sh
[2025-10-12 11:02:09] drwxrwx--x 2 boincer umatlas      4096 Oct 12 10:06 shared
[2025-10-12 11:02:09] -rw-r--r-- 2 boincer umatlas    569678 Oct 12 10:06 input.tar.gz
[2025-10-12 11:02:09] -rw-r--r-- 2 boincer umatlas 223396460 Oct 12 10:06 EVNT.46676267._003512.pool.root.1
[2025-10-12 11:02:09] -rw-r--r-- 1 boincer umatlas         0 Oct 12 10:06 boinc_lockfile
[2025-10-12 11:02:09] -rw-r--r-- 1 boincer umatlas      2550 Oct 12 10:06 pandaJob.out
[2025-10-12 11:02:09] -rw------- 1 boincer umatlas    975528 Oct 12 10:06 agis_schedconf.cvmfs.json
[2025-10-12 11:02:09] -rw------- 1 boincer umatlas   1560580 Oct 12 10:06 agis_ddmendpoints.agis.ALL.json
[2025-10-12 11:02:09] drwx------ 5 boincer umatlas      4096 Oct 12 10:06 pilot3
[2025-10-12 11:02:09] -rw-r--r-- 1 boincer umatlas      6136 Oct 12 10:58 init_data.xml
[2025-10-12 11:02:09] -rw------- 1 boincer umatlas 191722984 Oct 12 11:00 HITS.46676269._073786.pool.root.1
[2025-10-12 11:02:09] -rw-r--r-- 1 boincer umatlas       529 Oct 12 11:00 boinc_task_state.xml
[2025-10-12 11:02:09] -rw------- 1 boincer umatlas      1047 Oct 12 11:01 memory_monitor_summary.json
[2025-10-12 11:02:09] -rw------- 1 boincer umatlas    321681 Oct 12 11:01 log.46676269._073786.job.log.tgz.1
[2025-10-12 11:02:09] -rw------- 1 boincer umatlas      7835 Oct 12 11:01 heartbeat.json
[2025-10-12 11:02:09] -rw------- 1 boincer umatlas        95 Oct 12 11:01 pilot_heartbeat.json
[2025-10-12 11:02:09] -rw-r--r-- 1 boincer umatlas        27 Oct 12 11:01 wrapper_checkpoint.txt
[2025-10-12 11:02:09] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 11:01 boinc_mmap_file
[2025-10-12 11:02:09] -rw------- 1 boincer umatlas      5007 Oct 12 11:02 pilotlog.txt
[2025-10-12 11:02:09] -rw------- 1 boincer umatlas    500430 Oct 12 11:02 log.46676269._073786.job.log.1
[2025-10-12 11:02:09] -rw------- 1 boincer umatlas       357 Oct 12 11:02 output.list
[2025-10-12 11:02:09] -rw-r--r-- 1 boincer umatlas       620 Oct 12 11:02 runtime_log
[2025-10-12 11:02:09] -rw------- 1 boincer umatlas    839680 Oct 12 11:02 result.tar.gz
[2025-10-12 11:02:09] -rw------- 1 boincer umatlas       656 Oct 12 11:02 TeaNDmNv5R8n9Rq4apOajLDm4fhM0noT9bVof3QYDmbTTMDm6MgKwm.diag
[2025-10-12 11:02:09] -rw-r--r-- 1 boincer umatlas      8703 Oct 12 11:02 runtime_log.err
[2025-10-12 11:02:09] -rw-r--r-- 1 boincer umatlas     22141 Oct 12 11:02 stderr.txt
[2025-10-12 11:02:09] HITS file was successfully produced:
[2025-10-12 11:02:09] -rw------- 1 boincer umatlas 191722984 Oct 12 11:00 shared/HITS.pool.root.1
[2025-10-12 11:02:09]  *** Contents of shared directory: ***
[2025-10-12 11:02:09] total 406796
[2025-10-12 11:02:09] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 10:06 start_atlas.sh
[2025-10-12 11:02:09] -rw-r--r-- 2 boincer umatlas    569678 Oct 12 10:06 input.tar.gz
[2025-10-12 11:02:09] -rw-r--r-- 2 boincer umatlas 223396460 Oct 12 10:06 ATLAS.root_0
[2025-10-12 11:02:09] -rw------- 1 boincer umatlas 191722984 Oct 12 11:00 HITS.pool.root.1
[2025-10-12 11:02:09] -rw------- 1 boincer umatlas    839680 Oct 12 11:02 result.tar.gz
11:02:11 (22631): run_atlas exited; CPU time 23523.010640
11:02:11 (22631): called boinc_finish(0)

</stderr_txt>
]]>

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