Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
21:14:17 (2030946): wrapper (7.7.26015): starting
21:14:17 (2030946): wrapper: running run_atlas (--nthreads 4)
[2025-10-12 21:14:17] Arguments: --nthreads 4
[2025-10-12 21:14:17] Threads: 4
[2025-10-12 21:14:17] Checking for CVMFS
[2025-10-12 21:14:18] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 21:14:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 21:14:18] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 21:14:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 21:14:18] 2.13.2.0 428253 4761 53040 151633 3 57 2196714 4096000 1844 130560 0 15684004 99.997 288921 2387 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-12 21:14:18] CVMFS is ok
[2025-10-12 21:14:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 21:14:18] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-12 21:14:18] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-12 21:14:18] Further information can be found at the LHC@home message board.
[2025-10-12 21:14:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 21:14:18] Checking for apptainer binary...
[2025-10-12 21:14:18] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 21:14:18] Running /usr/bin/apptainer --version
[2025-10-12 21:14:18] apptainer version 1.4.2
[2025-10-12 21:14:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 21:14:18] Ryzen-9-7950X3D-Zen4-Ubu24
[2025-10-12 21:14:18] apptainer works
[2025-10-12 21:14:18] Set ATHENA_PROC_NUMBER=4
[2025-10-12 21:14:18] Set ATHENA_CORE_NUMBER=4
[2025-10-12 21:14:18] Starting ATLAS job with PandaID=6839591650
[2025-10-12 21:14:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/18 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 22:35:39]  *** The last 200 lines of the pilot log: ***
[2025-10-12 22:35:39] ]
[2025-10-12 22:35:39] 2025-10-12 20:34:36,917 | INFO     | transferring file log.46676269._072914.job.log.tgz.1 from /var/lib/boinc-client/slots/18/PanDA_Pilot-6839591650/log.46676269._072914.job.log.tgz.1 to /var/lib/boin
[2025-10-12 22:35:39] 2025-10-12 20:34:36,917 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/18/PanDA_Pilot-6839591650/log.46676269._072914.job.log.tgz.1 /var/lib/boinc-client/slots/18/log.4667
[2025-10-12 22:35:39] 2025-10-12 20:34:36,942 | INFO     | adding to output.list: log.46676269._072914.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/5d/3e/log.46676269._072914.job.log.tg
[2025-10-12 22:35:39] 2025-10-12 20:34:36,942 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 22:35:39] 2025-10-12 20:34:36,942 | INFO     | summary of transferred files:
[2025-10-12 22:35:39] 2025-10-12 20:34:36,943 | INFO     |  -- lfn=log.46676269._072914.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 22:35:39] 2025-10-12 20:34:36,943 | INFO     | stage-out finished correctly
[2025-10-12 22:35:39] 2025-10-12 20:34:36,983 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 22:35:39] 2025-10-12 20:34:38,026 | INFO     | time since job start (4813s) is within the limit (172800.0s)
[2025-10-12 22:35:39] 2025-10-12 20:34:38,633 | INFO     | job 6839591650 has state=finished
[2025-10-12 22:35:39] 2025-10-12 20:34:38,634 | INFO     | preparing for final server update for job 6839591650 in state='finished'
[2025-10-12 22:35:39] 2025-10-12 20:34:39,068 | WARNING  | process 2041442 can no longer be monitored (due to stat problems) - aborting
[2025-10-12 22:35:39] 2025-10-12 20:34:39,068 | INFO     | using path: /var/lib/boinc-client/slots/18/PanDA_Pilot-6839591650/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 22:35:39] 2025-10-12 20:34:39,134 | INFO     | number of running child processes to parent process 2041442: 1
[2025-10-12 22:35:39] 2025-10-12 20:34:39,134 | INFO     | maximum number of monitored processes: 6
[2025-10-12 22:35:39] 2025-10-12 20:34:39,449 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-10-12 22:35:39] 2025-10-12 20:34:39,450 | INFO     | this job has now completed (state=finished)
[2025-10-12 22:35:39] 2025-10-12 20:34:39,450 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 22:35:39] 2025-10-12 20:34:39,450 | INFO     | log transfer has been attempted: DONE
[2025-10-12 22:35:39] 2025-10-12 20:34:39,450 | INFO     | job 6839591650 has finished - writing final server update
[2025-10-12 22:35:39] 2025-10-12 20:34:39,450 | INFO     | total number of processed events: 400 (read)
[2025-10-12 22:35:39] 2025-10-12 20:34:39,453 | INFO     | executing command: lscpu
[2025-10-12 22:35:39] 2025-10-12 20:34:39,515 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 22:35:39] 2025-10-12 20:34:40,032 | INFO     | time since job start (4815s) is within the limit (172800.0s)
[2025-10-12 22:35:39] 2025-10-12 20:34:41,639 | INFO     | monitor loop #368: job 0:6839591650 is in state 'finished'
[2025-10-12 22:35:39] 2025-10-12 20:34:41,639 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 22:35:39] 2025-10-12 20:34:42,036 | INFO     | time since job start (4817s) is within the limit (172800.0s)
[2025-10-12 22:35:39] 2025-10-12 20:34:44,041 | INFO     | time since job start (4819s) is within the limit (172800.0s)
[2025-10-12 22:35:39] 2025-10-12 20:34:44,142 | INFO     | monitor loop #369: job 0:6839591650 is in state 'finished'
[2025-10-12 22:35:39] 2025-10-12 20:34:44,142 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 22:35:39] 2025-10-12 20:34:46,046 | INFO     | time since job start (4821s) is within the limit (172800.0s)
[2025-10-12 22:35:39] 2025-10-12 20:34:46,644 | INFO     | monitor loop #370: job 0:6839591650 is in state 'finished'
[2025-10-12 22:35:39] 2025-10-12 20:34:46,644 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 22:35:39] 2025-10-12 20:34:48,053 | INFO     | time since job start (4823s) is within the limit (172800.0s)
[2025-10-12 22:35:39] 2025-10-12 20:34:48,515 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-12 22:35:39] 2025-10-12 20:34:48,517 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 4539.6335312500005
[2025-10-12 22:35:39] 2025-10-12 20:34:48,520 | INFO     | using path: /var/lib/boinc-client/slots/18/PanDA_Pilot-6839591650/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 22:35:39] 2025-10-12 20:34:48,521 | INFO     | extracted standard info from prmon json
[2025-10-12 22:35:39] 2025-10-12 20:34:48,521 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 22:35:39] 2025-10-12 20:34:48,521 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 22:35:39] 2025-10-12 20:34:48,521 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 22:35:39] 2025-10-12 20:34:48,521 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 22:35:39] 2025-10-12 20:34:48,522 | INFO     | fitting pss+swap vs Time
[2025-10-12 22:35:39] 2025-10-12 20:34:48,522 | INFO     | sum of square deviations: 115715658.0
[2025-10-12 22:35:39] 2025-10-12 20:34:48,522 | INFO     | sum of deviations: -892244834.5000005
[2025-10-12 22:35:39] 2025-10-12 20:34:48,522 | INFO     | mean x: 1760298956.5
[2025-10-12 22:35:39] 2025-10-12 20:34:48,522 | INFO     | mean y: 2335255.263888889
[2025-10-12 22:35:39] 2025-10-12 20:34:48,522 | INFO     | -- intersect: 13575413248.847662
[2025-10-12 22:35:39] 2025-10-12 20:34:48,522 | INFO     | intersect: 13575413248.847662
[2025-10-12 22:35:39] 2025-10-12 20:34:48,522 | INFO     | chi2: 0.036891193371127055
[2025-10-12 22:35:39] 2025-10-12 20:34:48,522 | INFO     | -- intersect: 13575413248.847662
[2025-10-12 22:35:39] 2025-10-12 20:34:48,522 | INFO     | current memory leak: -7.71 B/s (using 72 data points, chi2=0.04)
[2025-10-12 22:35:39] 2025-10-12 20:34:48,522 | INFO     | could have reported an average CPU frequency of 4522 MHz (6 samples)
[2025-10-12 22:35:39] 2025-10-12 20:34:48,522 | INFO     | ..............................
[2025-10-12 22:35:39] 2025-10-12 20:34:48,522 | INFO     | . Timing measurements:
[2025-10-12 22:35:39] 2025-10-12 20:34:48,522 | INFO     | . get job = 0 s
[2025-10-12 22:35:39] 2025-10-12 20:34:48,523 | INFO     | . initial setup = 1 s
[2025-10-12 22:35:39] 2025-10-12 20:34:48,523 | INFO     | . payload setup = 4 s
[2025-10-12 22:35:39] 2025-10-12 20:34:48,523 | INFO     | . stage-in = 0 s
[2025-10-12 22:35:39] 2025-10-12 20:34:48,523 | INFO     | . payload execution = 4789 s
[2025-10-12 22:35:39] 2025-10-12 20:34:48,523 | INFO     | . stage-out = 0 s
[2025-10-12 22:35:39] 2025-10-12 20:34:48,523 | INFO     | . log creation = 0 s
[2025-10-12 22:35:39] 2025-10-12 20:34:48,523 | INFO     | ..............................
[2025-10-12 22:35:39] 2025-10-12 20:34:48,574 | INFO     | 
[2025-10-12 22:35:39] 2025-10-12 20:34:48,574 | INFO     | job summary report
[2025-10-12 22:35:39] 2025-10-12 20:34:48,574 | INFO     | --------------------------------------------------
[2025-10-12 22:35:39] 2025-10-12 20:34:48,574 | INFO     | PanDA job id: 6839591650
[2025-10-12 22:35:39] 2025-10-12 20:34:48,574 | INFO     | task id: 46676269
[2025-10-12 22:35:39] 2025-10-12 20:34:48,574 | INFO     | errors: (none)
[2025-10-12 22:35:39] 2025-10-12 20:34:48,574 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 22:35:39] 2025-10-12 20:34:48,574 | INFO     | pilot state: finished 
[2025-10-12 22:35:39] 2025-10-12 20:34:48,574 | INFO     | transexitcode: 0
[2025-10-12 22:35:39] 2025-10-12 20:34:48,574 | INFO     | exeerrorcode: 0
[2025-10-12 22:35:39] 2025-10-12 20:34:48,574 | INFO     | exeerrordiag: 
[2025-10-12 22:35:39] 2025-10-12 20:34:48,574 | INFO     | exitcode: 0
[2025-10-12 22:35:39] 2025-10-12 20:34:48,574 | INFO     | exitmsg: OK
[2025-10-12 22:35:39] 2025-10-12 20:34:48,574 | INFO     | cpuconsumptiontime: 18633 s
[2025-10-12 22:35:39] 2025-10-12 20:34:48,575 | INFO     | nevents: 400
[2025-10-12 22:35:39] 2025-10-12 20:34:48,575 | INFO     | neventsw: 0
[2025-10-12 22:35:39] 2025-10-12 20:34:48,575 | INFO     | pid: 2041442
[2025-10-12 22:35:39] 2025-10-12 20:34:48,575 | INFO     | pgrp: 2041442
[2025-10-12 22:35:39] 2025-10-12 20:34:48,575 | INFO     | corecount: 4
[2025-10-12 22:35:39] 2025-10-12 20:34:48,575 | INFO     | event service: False
[2025-10-12 22:35:39] 2025-10-12 20:34:48,575 | INFO     | sizes: {0: 2348814, 3: 2349076, 11: 2349104, 4797: 2375511, 4798: 2384581, 4809: 2384719}
[2025-10-12 22:35:39] 2025-10-12 20:34:48,575 | INFO     | --------------------------------------------------
[2025-10-12 22:35:39] 2025-10-12 20:34:48,575 | INFO     | 
[2025-10-12 22:35:39] 2025-10-12 20:34:48,575 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/18
[2025-10-12 22:35:39] 2025-10-12 20:34:48,628 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 22:35:39] 2025-10-12 20:34:48,629 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 22:35:39] 2025-10-12 20:34:48,629 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 22:35:39] 2025-10-12 20:34:48,629 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 22:35:39] 2025-10-12 20:34:48,629 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 22:35:39] 2025-10-12 20:34:48,629 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 22:35:39] 2025-10-12 20:34:48,629 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 22:35:39] 2025-10-12 20:34:48,629 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 22:35:39] 2025-10-12 20:34:48,629 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 22:35:39] 2025-10-12 20:34:48,629 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 22:35:39] 2025-10-12 20:34:48,629 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 22:35:39] 2025-10-12 20:34:48,629 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 22:35:39] 2025-10-12 20:34:48,629 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 22:35:39] 2025-10-12 20:34:48,629 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 22:35:39] 2025-10-12 20:34:48,629 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 22:35:39] 2025-10-12 20:34:48,629 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 22:35:39] 2025-10-12 20:34:48,629 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 22:35:39] 2025-10-12 20:34:48,629 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 22:35:39] 2025-10-12 20:34:48,629 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 22:35:39] 2025-10-12 20:34:48,629 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 22:35:39] 2025-10-12 20:34:48,629 | INFO     | job 6839591650 has completed (purged errors)
[2025-10-12 22:35:39] 2025-10-12 20:34:48,629 | INFO     | overall cleanup function is called
[2025-10-12 22:35:39] 2025-10-12 20:34:49,635 | INFO     | --- collectZombieJob: --- 10, [2041442]
[2025-10-12 22:35:39] 2025-10-12 20:34:49,635 | INFO     | zombie collector waiting for pid 2041442
[2025-10-12 22:35:39] 2025-10-12 20:34:49,635 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 22:35:39] 2025-10-12 20:34:49,636 | INFO     | collected zombie processes
[2025-10-12 22:35:39] 2025-10-12 20:34:49,636 | INFO     | will attempt to kill all subprocesses of pid=2041442
[2025-10-12 22:35:39] 2025-10-12 20:34:49,704 | INFO     | process IDs to be killed: [2041442] (in reverse order)
[2025-10-12 22:35:39] 2025-10-12 20:34:49,843 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 22:35:39] 2025-10-12 20:34:49,844 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 22:35:39] 2025-10-12 20:34:49,846 | INFO     | did not find any defunct processes belonging to 2041442
[2025-10-12 22:35:39] 2025-10-12 20:34:49,848 | INFO     | did not find any defunct processes belonging to 2041442
[2025-10-12 22:35:39] 2025-10-12 20:34:49,849 | INFO     | ready for new job
[2025-10-12 22:35:39] 2025-10-12 20:34:49,849 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 22:35:39] 2025-10-12 20:34:49,850 | INFO     | ***************************************
[2025-10-12 22:35:39] 2025-10-12 20:34:49,850 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 22:35:39] 2025-10-12 20:34:49,850 | INFO     | ***************************************
[2025-10-12 22:35:39] 2025-10-12 20:34:49,850 | INFO     | 
[2025-10-12 22:35:39] 2025-10-12 20:34:49,851 | INFO     | architecture information:
[2025-10-12 22:35:39] 2025-10-12 20:34:49,851 | INFO     | executing command: cat /etc/os-release
[2025-10-12 22:35:39] 2025-10-12 20:34:49,893 | INFO     | cat /etc/os-release:
[2025-10-12 22:35:39] NAME="CentOS Linux"
[2025-10-12 22:35:39] VERSION="7 (Core)"
[2025-10-12 22:35:39] ID="centos"
[2025-10-12 22:35:39] ID_LIKE="rhel fedora"
[2025-10-12 22:35:39] VERSION_ID="7"
[2025-10-12 22:35:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 22:35:39] ANSI_COLOR="0;31"
[2025-10-12 22:35:39] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 22:35:39] HOME_URL="https://www.centos.org/"
[2025-10-12 22:35:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 22:35:39] 
[2025-10-12 22:35:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 22:35:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 22:35:39] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 22:35:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 22:35:39] 
[2025-10-12 22:35:39] 2025-10-12 20:34:49,893 | INFO     | ***************************************
[2025-10-12 22:35:39] 2025-10-12 20:34:50,398 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/18
[2025-10-12 22:35:39] 2025-10-12 20:34:50,448 | INFO     | sufficient remaining disk space (1766086148096 B)
[2025-10-12 22:35:39] 2025-10-12 20:34:50,448 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 22:35:39] 2025-10-12 20:34:50,448 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 22:35:39] 2025-10-12 20:34:50,448 | INFO     | update_server=False
[2025-10-12 22:35:39] 2025-10-12 20:34:50,448 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 22:35:39] 2025-10-12 20:34:50,450 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 22:35:39] 2025-10-12 20:34:50,450 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 22:35:39] 2025-10-12 20:34:50,451 | INFO     | aborting loop
[2025-10-12 22:35:39] 2025-10-12 20:34:50,452 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 22:35:39] 2025-10-12 20:34:50,833 | INFO     | all data control threads have been joined
[2025-10-12 22:35:39] 2025-10-12 20:34:51,310 | INFO     | all payload control threads have been joined
[2025-10-12 22:35:39] 2025-10-12 20:34:51,455 | INFO     | [job] retrieve thread has finished
[2025-10-12 22:35:39] 2025-10-12 20:34:51,456 | INFO     | [job] job monitor thread has finished
[2025-10-12 22:35:39] 2025-10-12 20:34:51,457 | INFO     | [job] queue monitor thread has finished
[2025-10-12 22:35:39] 2025-10-12 20:34:51,838 | INFO     | [data] control thread has finished
[2025-10-12 22:35:39] 2025-10-12 20:34:51,864 | INFO     | [payload] validate_post thread has finished
[2025-10-12 22:35:39] 2025-10-12 20:34:51,991 | INFO     | [payload] failed_post thread has finished
[2025-10-12 22:35:39] 2025-10-12 20:34:52,037 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 22:35:39] 2025-10-12 20:34:52,076 | INFO     | all job control threads have been joined
[2025-10-12 22:35:39] 2025-10-12 20:34:52,289 | INFO     | [job] validate thread has finished
[2025-10-12 22:35:39] 2025-10-12 20:34:52,308 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 22:35:39] 2025-10-12 20:34:52,315 | INFO     | [payload] control thread has finished
[2025-10-12 22:35:39] 2025-10-12 20:34:52,320 | INFO     | [data] copytool_in thread has finished
[2025-10-12 22:35:39] 2025-10-12 20:34:52,352 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 22:35:39] 2025-10-12 20:34:52,427 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 22:35:39] 2025-10-12 20:34:52,455 | INFO     | [data] copytool_out thread has finished
[2025-10-12 22:35:39] 2025-10-12 20:34:53,081 | INFO     | [job] control thread has finished
[2025-10-12 22:35:39] 2025-10-12 20:34:56,042 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 22:35:39] 2025-10-12 20:35:00,940 | INFO     | job.realtimelogging is not enabled
[2025-10-12 22:35:39] 2025-10-12 20:35:01,945 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 22:35:39] 2025-10-12 20:35:21,190 | INFO     | PID=2034797 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 22:35:39] 2025-10-12 20:35:21,190 | INFO     | .. there are 4 such processes running
[2025-10-12 22:35:39] 2025-10-12 20:35:21,193 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 22:35:39] 2025-10-12 20:35:21,193 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 22:35:39] 2025-10-12 20:35:21,193 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 22:35:39] 2025-10-12 20:35:33,281 | INFO     | [monitor] cgroup control has ended
[2025-10-12 22:35:39] 2025-10-12 20:35:34,610 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 137191972898624)>', '<ExcThread(monitor, started 137191606949632)>']
[2025-10-12 22:35:39] 2025-10-12 20:35:35,266 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 22:35:39] 2025-10-12 20:35:35,266 | INFO     | [monitor] control thread has ended
[2025-10-12 22:35:39] 2025-10-12 20:35:39,634 | INFO     | all workflow threads have been joined
[2025-10-12 22:35:39] 2025-10-12 20:35:39,634 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 22:35:39] 2025-10-12 20:35:39,635 | INFO     | traces error code: 0
[2025-10-12 22:35:39] 2025-10-12 20:35:39,635 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 22:35:39] 2025-10-12 20:35:39,718 [wrapper] ==== pilot stdout END ====
[2025-10-12 22:35:39] 2025-10-12 20:35:39,731 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 22:35:39] 2025-10-12 20:35:39,735 [wrapper] pilotpid: 2034797
[2025-10-12 22:35:39] 2025-10-12 20:35:39,739 [wrapper] Pilot exit status: 0
[2025-10-12 22:35:39] 2025-10-12 20:35:39,794 [wrapper] pandaids: 6839591650
[2025-10-12 22:35:39] 2025-10-12 20:35:39,860 [wrapper] cleanup supervisor_pilot 2118152 2034798
[2025-10-12 22:35:39] 2025-10-12 20:35:39,866 [wrapper] Test setup, not cleaning
[2025-10-12 22:35:39] 2025-10-12 20:35:39,869 [wrapper] apfmon messages muted
[2025-10-12 22:35:39] 2025-10-12 20:35:39,873 [wrapper] ==== wrapper stdout END ====
[2025-10-12 22:35:39] 2025-10-12 20:35:39,877 [wrapper] ==== wrapper stderr END ====
[2025-10-12 22:35:39]  *** Error codes and diagnostics ***
[2025-10-12 22:35:39]     "exeErrorCode": 0,
[2025-10-12 22:35:39]     "exeErrorDiag": "",
[2025-10-12 22:35:39]     "pilotErrorCode": 0,
[2025-10-12 22:35:39]     "pilotErrorDiag": "",
[2025-10-12 22:35:39]  *** Listing of results directory ***
[2025-10-12 22:35:39] total 414140
[2025-10-12 22:35:39] -rw-r--r-- 1 boinc boinc    557409 Oct 12 08:14 pilot3.tar.gz
[2025-10-12 22:35:39] -rw-r--r-- 1 boinc boinc      5112 Oct 12 08:41 queuedata.json
[2025-10-12 22:35:39] -rwx------ 1 boinc boinc     36292 Oct 12 08:41 runpilot2-wrapper.sh
[2025-10-12 22:35:39] -rw-r--r-- 1 boinc boinc       100 Oct 12 21:14 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 22:35:39] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 21:14 run_atlas
[2025-10-12 22:35:39] -rw-r--r-- 1 boinc boinc       105 Oct 12 21:14 job.xml
[2025-10-12 22:35:39] -rw-r--r-- 2 boinc boinc 220931728 Oct 12 21:14 EVNT.46676267._004519.pool.root.1
[2025-10-12 22:35:39] -rw-r--r-- 2 boinc boinc     15120 Oct 12 21:14 start_atlas.sh
[2025-10-12 22:35:39] drwxrwx--x 2 boinc boinc      4096 Oct 12 21:14 shared
[2025-10-12 22:35:39] -rw-r--r-- 2 boinc boinc    569676 Oct 12 21:14 input.tar.gz
[2025-10-12 22:35:39] -rw-r--r-- 1 boinc boinc         0 Oct 12 21:14 boinc_lockfile
[2025-10-12 22:35:39] -rw-r--r-- 1 boinc boinc      2549 Oct 12 21:14 pandaJob.out
[2025-10-12 22:35:39] -rw------- 1 boinc boinc    975528 Oct 12 21:14 agis_schedconf.cvmfs.json
[2025-10-12 22:35:39] -rw------- 1 boinc boinc   1560580 Oct 12 21:14 agis_ddmendpoints.agis.ALL.json
[2025-10-12 22:35:39] drwx------ 5 boinc boinc      4096 Oct 12 21:14 pilot3
[2025-10-12 22:35:39] -rw-r--r-- 1 boinc boinc      9521 Oct 12 22:31 init_data.xml
[2025-10-12 22:35:39] -rw-r--r-- 1 boinc boinc       530 Oct 12 22:34 boinc_task_state.xml
[2025-10-12 22:35:39] -rw------- 1 boinc boinc 197211531 Oct 12 22:34 HITS.46676269._072914.pool.root.1
[2025-10-12 22:35:39] -rw------- 1 boinc boinc      1025 Oct 12 22:34 memory_monitor_summary.json
[2025-10-12 22:35:39] -rw------- 1 boinc boinc    281529 Oct 12 22:34 log.46676269._072914.job.log.tgz.1
[2025-10-12 22:35:39] -rw------- 1 boinc boinc      7781 Oct 12 22:34 heartbeat.json
[2025-10-12 22:35:39] -rw------- 1 boinc boinc        95 Oct 12 22:35 pilot_heartbeat.json
[2025-10-12 22:35:39] -rw-r--r-- 1 boinc boinc      8192 Oct 12 22:35 boinc_mmap_file
[2025-10-12 22:35:39] -rw-r--r-- 1 boinc boinc        27 Oct 12 22:35 wrapper_checkpoint.txt
[2025-10-12 22:35:39] -rw------- 1 boinc boinc      4905 Oct 12 22:35 pilotlog.txt
[2025-10-12 22:35:39] -rw------- 1 boinc boinc    729536 Oct 12 22:35 log.46676269._072914.job.log.1
[2025-10-12 22:35:39] -rw------- 1 boinc boinc       357 Oct 12 22:35 output.list
[2025-10-12 22:35:39] -rw-r--r-- 1 boinc boinc       620 Oct 12 22:35 runtime_log
[2025-10-12 22:35:39] -rw------- 1 boinc boinc   1034240 Oct 12 22:35 result.tar.gz
[2025-10-12 22:35:39] -rw------- 1 boinc boinc       657 Oct 12 22:35 UhKKDmDx4R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmKuiNDmsoY1Nn.diag
[2025-10-12 22:35:39] -rw-r--r-- 1 boinc boinc      8855 Oct 12 22:35 runtime_log.err
[2025-10-12 22:35:39] -rw-r--r-- 1 boinc boinc     22445 Oct 12 22:35 stderr.txt
[2025-10-12 22:35:40] HITS file was successfully produced:
[2025-10-12 22:35:40] -rw------- 1 boinc boinc 197211531 Oct 12 22:34 shared/HITS.pool.root.1
[2025-10-12 22:35:40]  *** Contents of shared directory: ***
[2025-10-12 22:35:40] total 409940
[2025-10-12 22:35:40] -rw-r--r-- 2 boinc boinc 220931728 Oct 12 21:14 ATLAS.root_0
[2025-10-12 22:35:40] -rw-r--r-- 2 boinc boinc     15120 Oct 12 21:14 start_atlas.sh
[2025-10-12 22:35:40] -rw-r--r-- 2 boinc boinc    569676 Oct 12 21:14 input.tar.gz
[2025-10-12 22:35:40] -rw------- 1 boinc boinc 197211531 Oct 12 22:34 HITS.pool.root.1
[2025-10-12 22:35:40] -rw------- 1 boinc boinc   1034240 Oct 12 22:35 result.tar.gz
22:35:41 (2030946): run_atlas exited; CPU time 18648.323068
22:35:41 (2030946): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN