Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:00:15 (4049287): wrapper (7.7.26015): starting
03:00:15 (4049287): wrapper: running run_atlas (--nthreads 6)
[2025-10-13 03:00:15] Arguments: --nthreads 6
[2025-10-13 03:00:15] Threads: 6
[2025-10-13 03:00:15] Checking for CVMFS
[2025-10-13 03:00:15] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 03:00:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 03:00:15] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 03:00:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 03:00:16] 2.11.5.0 3651556 4631 73512 151630 3 57 38754425 52428800 1858 130560 0 14500315 99.998 159180 14 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-10-13 03:00:16] CVMFS is ok
[2025-10-13 03:00:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 03:00:16] Checking for apptainer binary...
[2025-10-13 03:00:16] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 03:00:16] Running /usr/bin/apptainer --version
[2025-10-13 03:00:16] apptainer version 1.3.5-1.el9
[2025-10-13 03:00:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 03:00:16] testio008
[2025-10-13 03:00:16] apptainer works
[2025-10-13 03:00:16] Set ATHENA_PROC_NUMBER=6
[2025-10-13 03:00:16] Set ATHENA_CORE_NUMBER=6
[2025-10-13 03:00:16] Starting ATLAS job with PandaID=6839591909
[2025-10-13 03:00:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 04:09:43]  *** The last 200 lines of the pilot log: ***
[2025-10-13 04:09:43] 2025-10-12 19:08:46,158 | INFO     | monitor loop #332: job 0:6839591909 is in state 'finished'
[2025-10-13 04:09:43] 2025-10-12 19:08:46,159 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 04:09:43] 2025-10-12 19:08:47,765 | INFO     | time since job start (4103s) is within the limit (172800.0s)
[2025-10-13 04:09:43] 2025-10-12 19:08:48,661 | INFO     | monitor loop #333: job 0:6839591909 is in state 'finished'
[2025-10-13 04:09:43] 2025-10-12 19:08:48,662 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 04:09:43] 2025-10-12 19:08:49,770 | INFO     | time since job start (4105s) is within the limit (172800.0s)
[2025-10-13 04:09:43] 2025-10-12 19:08:51,163 | INFO     | monitor loop #334: job 0:6839591909 is in state 'finished'
[2025-10-13 04:09:43] 2025-10-12 19:08:51,164 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 04:09:43] 2025-10-12 19:08:51,775 | INFO     | time since job start (4107s) is within the limit (172800.0s)
[2025-10-13 04:09:43] 2025-10-12 19:08:53,665 | INFO     | monitor loop #335: job 0:6839591909 is in state 'finished'
[2025-10-13 04:09:43] 2025-10-12 19:08:53,666 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 04:09:43] 2025-10-12 19:08:53,781 | INFO     | time since job start (4109s) is within the limit (172800.0s)
[2025-10-13 04:09:43] 2025-10-12 19:08:55,786 | INFO     | time since job start (4111s) is within the limit (172800.0s)
[2025-10-13 04:09:43] 2025-10-12 19:08:56,168 | INFO     | monitor loop #336: job 0:6839591909 is in state 'finished'
[2025-10-13 04:09:43] 2025-10-12 19:08:56,169 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 04:09:43] 2025-10-12 19:08:57,792 | INFO     | time since job start (4113s) is within the limit (172800.0s)
[2025-10-13 04:09:43] 2025-10-12 19:08:58,671 | INFO     | monitor loop #337: job 0:6839591909 is in state 'finished'
[2025-10-13 04:09:43] 2025-10-12 19:08:58,672 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 04:09:43] 2025-10-12 19:08:59,797 | INFO     | time since job start (4115s) is within the limit (172800.0s)
[2025-10-13 04:09:43] 2025-10-12 19:09:00,846 | INFO     | PID=4053052 has CPU usage=0.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 04:09:43] 2025-10-12 19:09:00,846 | INFO     | .. there are 3 such processes running
[2025-10-13 04:09:43] 2025-10-12 19:09:01,174 | INFO     | monitor loop #338: job 0:6839591909 is in state 'finished'
[2025-10-13 04:09:43] 2025-10-12 19:09:01,175 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 04:09:43] 2025-10-12 19:09:01,846 | INFO     | time since job start (4117s) is within the limit (172800.0s)
[2025-10-13 04:09:43] 2025-10-12 19:09:03,676 | INFO     | monitor loop #339: job 0:6839591909 is in state 'finished'
[2025-10-13 04:09:43] 2025-10-12 19:09:03,677 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 04:09:43] 2025-10-12 19:09:03,851 | INFO     | time since job start (4119s) is within the limit (172800.0s)
[2025-10-13 04:09:43] 2025-10-12 19:09:05,856 | INFO     | time since job start (4121s) is within the limit (172800.0s)
[2025-10-13 04:09:43] 2025-10-12 19:09:06,179 | INFO     | monitor loop #340: job 0:6839591909 is in state 'finished'
[2025-10-13 04:09:43] 2025-10-12 19:09:06,180 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 04:09:43] 2025-10-12 19:09:07,861 | INFO     | time since job start (4123s) is within the limit (172800.0s)
[2025-10-13 04:09:43] 2025-10-12 19:09:08,682 | INFO     | monitor loop #341: job 0:6839591909 is in state 'finished'
[2025-10-13 04:09:43] 2025-10-12 19:09:08,683 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 04:09:43] 2025-10-12 19:09:09,866 | INFO     | time since job start (4125s) is within the limit (172800.0s)
[2025-10-13 04:09:43] 2025-10-12 19:09:10,071 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-13 04:09:43] 2025-10-12 19:09:10,074 | INFO     | found 12 cores (12 cores per socket, 1 socket) , CPU MHz: 1984.9353499999997
[2025-10-13 04:09:43] 2025-10-12 19:09:10,077 | INFO     | using path: /var/lib/boinc/slots/2/PanDA_Pilot-6839591909/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 04:09:43] 2025-10-12 19:09:10,078 | INFO     | extracted standard info from prmon json
[2025-10-13 04:09:43] 2025-10-12 19:09:10,078 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 04:09:43] 2025-10-12 19:09:10,078 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 04:09:43] 2025-10-12 19:09:10,078 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 04:09:43] 2025-10-12 19:09:10,078 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 04:09:43] 2025-10-12 19:09:10,080 | INFO     | fitting pss+swap vs Time
[2025-10-13 04:09:43] 2025-10-12 19:09:10,080 | INFO     | sum of square deviations: 63666310.0
[2025-10-13 04:09:43] 2025-10-12 19:09:10,080 | INFO     | sum of deviations: -2367742084.0
[2025-10-13 04:09:43] 2025-10-12 19:09:10,080 | INFO     | mean x: 1760294117.0
[2025-10-13 04:09:43] 2025-10-12 19:09:10,081 | INFO     | mean y: 2499969.0508474577
[2025-10-13 04:09:43] 2025-10-12 19:09:10,081 | INFO     | -- intersect: 65467617407.74834
[2025-10-13 04:09:43] 2025-10-12 19:09:10,081 | INFO     | intersect: 65467617407.74834
[2025-10-13 04:09:43] 2025-10-12 19:09:10,081 | INFO     | chi2: 0.046841883983965805
[2025-10-13 04:09:43] 2025-10-12 19:09:10,081 | INFO     | -- intersect: 65467617407.74834
[2025-10-13 04:09:43] 2025-10-12 19:09:10,081 | INFO     | current memory leak: -37.19 B/s (using 59 data points, chi2=0.05)
[2025-10-13 04:09:43] 2025-10-12 19:09:10,081 | INFO     | could have reported an average CPU frequency of 3367 MHz (6 samples)
[2025-10-13 04:09:43] 2025-10-12 19:09:10,081 | INFO     | ..............................
[2025-10-13 04:09:43] 2025-10-12 19:09:10,081 | INFO     | . Timing measurements:
[2025-10-13 04:09:43] 2025-10-12 19:09:10,082 | INFO     | . get job = 0 s
[2025-10-13 04:09:43] 2025-10-12 19:09:10,082 | INFO     | . initial setup = 4 s
[2025-10-13 04:09:43] 2025-10-12 19:09:10,082 | INFO     | . payload setup = 2 s
[2025-10-13 04:09:43] 2025-10-12 19:09:10,082 | INFO     | . stage-in = 0 s
[2025-10-13 04:09:43] 2025-10-12 19:09:10,082 | INFO     | . payload execution = 4024 s
[2025-10-13 04:09:43] 2025-10-12 19:09:10,082 | INFO     | . stage-out = 0 s
[2025-10-13 04:09:43] 2025-10-12 19:09:10,082 | INFO     | . log creation = 0 s
[2025-10-13 04:09:43] 2025-10-12 19:09:10,082 | INFO     | ..............................
[2025-10-13 04:09:43] 2025-10-12 19:09:10,397 | INFO     | 
[2025-10-13 04:09:43] 2025-10-12 19:09:10,398 | INFO     | job summary report
[2025-10-13 04:09:43] 2025-10-12 19:09:10,398 | INFO     | --------------------------------------------------
[2025-10-13 04:09:43] 2025-10-12 19:09:10,398 | INFO     | PanDA job id: 6839591909
[2025-10-13 04:09:43] 2025-10-12 19:09:10,398 | INFO     | task id: 46676269
[2025-10-13 04:09:43] 2025-10-12 19:09:10,398 | INFO     | errors: (none)
[2025-10-13 04:09:43] 2025-10-12 19:09:10,398 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 04:09:43] 2025-10-12 19:09:10,398 | INFO     | pilot state: finished 
[2025-10-13 04:09:43] 2025-10-12 19:09:10,398 | INFO     | transexitcode: 0
[2025-10-13 04:09:43] 2025-10-12 19:09:10,398 | INFO     | exeerrorcode: 0
[2025-10-13 04:09:43] 2025-10-12 19:09:10,398 | INFO     | exeerrordiag: 
[2025-10-13 04:09:43] 2025-10-12 19:09:10,398 | INFO     | exitcode: 0
[2025-10-13 04:09:43] 2025-10-12 19:09:10,398 | INFO     | exitmsg: OK
[2025-10-13 04:09:43] 2025-10-12 19:09:10,398 | INFO     | cpuconsumptiontime: 21788 s
[2025-10-13 04:09:43] 2025-10-12 19:09:10,398 | INFO     | nevents: 400
[2025-10-13 04:09:43] 2025-10-12 19:09:10,398 | INFO     | neventsw: 0
[2025-10-13 04:09:43] 2025-10-12 19:09:10,399 | INFO     | pid: 4059762
[2025-10-13 04:09:43] 2025-10-12 19:09:10,399 | INFO     | pgrp: 4059762
[2025-10-13 04:09:43] 2025-10-12 19:09:10,399 | INFO     | corecount: 6
[2025-10-13 04:09:43] 2025-10-12 19:09:10,399 | INFO     | event service: False
[2025-10-13 04:09:43] 2025-10-12 19:09:10,399 | INFO     | sizes: {0: 2348857, 2: 2349119, 11: 2349147, 4030: 2375075, 4032: 2384073, 4035: 2384129, 4112: 2384451}
[2025-10-13 04:09:43] 2025-10-12 19:09:10,399 | INFO     | --------------------------------------------------
[2025-10-13 04:09:43] 2025-10-12 19:09:10,399 | INFO     | 
[2025-10-13 04:09:43] 2025-10-12 19:09:10,399 | INFO     | executing command: ls -lF /var/lib/boinc/slots/2
[2025-10-13 04:09:43] 2025-10-12 19:09:10,411 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 04:09:43] 2025-10-12 19:09:10,412 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 04:09:43] 2025-10-12 19:09:10,412 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 04:09:43] 2025-10-12 19:09:10,412 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 04:09:43] 2025-10-12 19:09:10,412 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 04:09:43] 2025-10-12 19:09:10,412 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 04:09:43] 2025-10-12 19:09:10,412 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 04:09:43] 2025-10-12 19:09:10,412 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 04:09:43] 2025-10-12 19:09:10,412 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 04:09:43] 2025-10-12 19:09:10,412 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 04:09:43] 2025-10-12 19:09:10,412 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 04:09:43] 2025-10-12 19:09:10,412 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 04:09:43] 2025-10-12 19:09:10,413 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 04:09:43] 2025-10-12 19:09:10,413 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 04:09:43] 2025-10-12 19:09:10,413 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 04:09:43] 2025-10-12 19:09:10,413 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 04:09:43] 2025-10-12 19:09:10,413 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 04:09:43] 2025-10-12 19:09:10,413 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 04:09:43] 2025-10-12 19:09:10,413 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 04:09:43] 2025-10-12 19:09:10,413 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 04:09:43] 2025-10-12 19:09:10,413 | INFO     | job 6839591909 has completed (purged errors)
[2025-10-13 04:09:43] 2025-10-12 19:09:10,413 | INFO     | overall cleanup function is called
[2025-10-13 04:09:43] 2025-10-12 19:09:11,420 | INFO     | --- collectZombieJob: --- 10, [4059762]
[2025-10-13 04:09:43] 2025-10-12 19:09:11,420 | INFO     | zombie collector waiting for pid 4059762
[2025-10-13 04:09:43] 2025-10-12 19:09:11,420 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 04:09:43] 2025-10-12 19:09:11,420 | INFO     | collected zombie processes
[2025-10-13 04:09:43] 2025-10-12 19:09:11,420 | INFO     | will attempt to kill all subprocesses of pid=4059762
[2025-10-13 04:09:43] 2025-10-12 19:09:11,493 | INFO     | process IDs to be killed: [4059762] (in reverse order)
[2025-10-13 04:09:43] 2025-10-12 19:09:11,526 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 04:09:43] 2025-10-12 19:09:11,526 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 04:09:43] 2025-10-12 19:09:11,529 | INFO     | did not find any defunct processes belonging to 4059762
[2025-10-13 04:09:43] 2025-10-12 19:09:11,532 | INFO     | did not find any defunct processes belonging to 4059762
[2025-10-13 04:09:43] 2025-10-12 19:09:11,532 | INFO     | ready for new job
[2025-10-13 04:09:43] 2025-10-12 19:09:11,532 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 04:09:43] 2025-10-12 19:09:11,533 | INFO     | ***************************************
[2025-10-13 04:09:43] 2025-10-12 19:09:11,534 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 04:09:43] 2025-10-12 19:09:11,534 | INFO     | ***************************************
[2025-10-13 04:09:43] 2025-10-12 19:09:11,534 | INFO     | 
[2025-10-13 04:09:43] 2025-10-12 19:09:11,535 | INFO     | architecture information:
[2025-10-13 04:09:43] 2025-10-12 19:09:11,535 | INFO     | executing command: cat /etc/os-release
[2025-10-13 04:09:43] 2025-10-12 19:09:11,545 | INFO     | cat /etc/os-release:
[2025-10-13 04:09:43] NAME="CentOS Linux"
[2025-10-13 04:09:43] VERSION="7 (Core)"
[2025-10-13 04:09:43] ID="centos"
[2025-10-13 04:09:43] ID_LIKE="rhel fedora"
[2025-10-13 04:09:43] VERSION_ID="7"
[2025-10-13 04:09:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 04:09:43] ANSI_COLOR="0;31"
[2025-10-13 04:09:43] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 04:09:43] HOME_URL="https://www.centos.org/"
[2025-10-13 04:09:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 04:09:43] 
[2025-10-13 04:09:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 04:09:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 04:09:43] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 04:09:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 04:09:43] 
[2025-10-13 04:09:43] 2025-10-12 19:09:11,546 | INFO     | ***************************************
[2025-10-13 04:09:43] 2025-10-12 19:09:12,048 | INFO     | executing command: df -mP /var/lib/boinc/slots/2
[2025-10-13 04:09:43] 2025-10-12 19:09:12,059 | INFO     | sufficient remaining disk space (280275976192 B)
[2025-10-13 04:09:43] 2025-10-12 19:09:12,059 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 04:09:43] 2025-10-12 19:09:12,059 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 04:09:43] 2025-10-12 19:09:12,059 | INFO     | update_server=False
[2025-10-13 04:09:43] 2025-10-12 19:09:12,059 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 04:09:43] 2025-10-12 19:09:12,059 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 04:09:43] 2025-10-12 19:09:12,137 | INFO     | all data control threads have been joined
[2025-10-13 04:09:43] 2025-10-12 19:09:12,190 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 04:09:43] 2025-10-12 19:09:12,191 | INFO     | aborting loop
[2025-10-13 04:09:43] 2025-10-12 19:09:13,065 | INFO     | [job] retrieve thread has finished
[2025-10-13 04:09:43] 2025-10-12 19:09:13,065 | INFO     | [job] queue monitor thread has finished
[2025-10-13 04:09:43] 2025-10-12 19:09:13,080 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 04:09:43] 2025-10-12 19:09:13,138 | INFO     | [data] control thread has finished
[2025-10-13 04:09:43] 2025-10-12 19:09:13,139 | INFO     | all payload control threads have been joined
[2025-10-13 04:09:43] 2025-10-12 19:09:13,196 | INFO     | [job] job monitor thread has finished
[2025-10-13 04:09:43] 2025-10-12 19:09:13,449 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 04:09:43] 2025-10-12 19:09:13,479 | INFO     | all job control threads have been joined
[2025-10-13 04:09:43] 2025-10-12 19:09:13,495 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 04:09:43] 2025-10-12 19:09:13,517 | INFO     | [data] copytool_in thread has finished
[2025-10-13 04:09:43] 2025-10-12 19:09:13,739 | INFO     | [payload] failed_post thread has finished
[2025-10-13 04:09:43] 2025-10-12 19:09:14,144 | INFO     | [payload] control thread has finished
[2025-10-13 04:09:43] 2025-10-12 19:09:14,240 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 04:09:43] 2025-10-12 19:09:14,388 | INFO     | [job] validate thread has finished
[2025-10-13 04:09:43] 2025-10-12 19:09:14,485 | INFO     | [job] control thread has finished
[2025-10-13 04:09:43] 2025-10-12 19:09:14,532 | INFO     | [payload] validate_post thread has finished
[2025-10-13 04:09:43] 2025-10-12 19:09:15,279 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 04:09:43] 2025-10-12 19:09:15,454 | INFO     | [data] copytool_out thread has finished
[2025-10-13 04:09:43] 2025-10-12 19:09:19,284 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 04:09:43] 2025-10-12 19:09:22,868 | INFO     | job.realtimelogging is not enabled
[2025-10-13 04:09:43] 2025-10-12 19:09:23,873 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 04:09:43] 2025-10-12 19:09:30,253 | INFO     | [monitor] cgroup control has ended
[2025-10-13 04:09:43] 2025-10-12 19:09:30,595 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140611204523840)>', '<ExcThread(monitor, started 140610560313088)>']
[2025-10-13 04:09:43] 2025-10-12 19:09:35,619 | INFO     | all workflow threads have been joined
[2025-10-13 04:09:43] 2025-10-12 19:09:35,620 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 04:09:43] 2025-10-12 19:09:35,620 | INFO     | traces error code: 0
[2025-10-13 04:09:43] 2025-10-12 19:09:35,620 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 04:09:43] 2025-10-12 19:09:41,923 | INFO     | 4132s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-10-13 04:09:43] 2025-10-12 19:09:42,974 | INFO     | PID=4053052 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 04:09:43] 2025-10-12 19:09:42,974 | INFO     | .. there are 3 such processes running
[2025-10-13 04:09:43] 2025-10-12 19:09:42,974 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 04:09:43] 2025-10-12 19:09:42,974 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 04:09:43] 2025-10-12 19:09:42,974 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 04:09:43] 2025-10-12 19:09:42,974 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 04:09:43] 2025-10-12 19:09:42,974 | INFO     | [monitor] control thread has ended
[2025-10-13 04:09:43] 2025-10-12 19:09:43,032 [wrapper] ==== pilot stdout END ====
[2025-10-13 04:09:43] 2025-10-12 19:09:43,033 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 04:09:43] 2025-10-12 19:09:43,034 [wrapper] pilotpid: 4053052
[2025-10-13 04:09:43] 2025-10-12 19:09:43,035 [wrapper] Pilot exit status: 0
[2025-10-13 04:09:43] 2025-10-12 19:09:43,038 [wrapper] pandaids: 6839591909
[2025-10-13 04:09:43] 2025-10-12 19:09:43,049 [wrapper] cleanup supervisor_pilot 4117691 4053053
[2025-10-13 04:09:43] 2025-10-12 19:09:43,050 [wrapper] Test setup, not cleaning
[2025-10-13 04:09:43] 2025-10-12 19:09:43,051 [wrapper] apfmon messages muted
[2025-10-13 04:09:43] 2025-10-12 19:09:43,052 [wrapper] ==== wrapper stdout END ====
[2025-10-13 04:09:43] 2025-10-12 19:09:43,053 [wrapper] ==== wrapper stderr END ====
[2025-10-13 04:09:43]  *** Error codes and diagnostics ***
[2025-10-13 04:09:43]     "exeErrorCode": 0,
[2025-10-13 04:09:43]     "exeErrorDiag": "",
[2025-10-13 04:09:43]     "pilotErrorCode": 0,
[2025-10-13 04:09:43]     "pilotErrorDiag": "",
[2025-10-13 04:09:43]  *** Listing of results directory ***
[2025-10-13 04:09:43] total 411092
[2025-10-13 04:09:43] -rw-r--r--. 1 boinc boinc    557409 Oct 12 15:44 pilot3.tar.gz
[2025-10-13 04:09:43] -rw-r--r--. 1 boinc boinc      5112 Oct 12 15:45 queuedata.json
[2025-10-13 04:09:43] -rwx------. 1 boinc boinc     36292 Oct 12 15:45 runpilot2-wrapper.sh
[2025-10-13 04:09:43] -rw-r--r--. 1 boinc boinc       100 Oct 13 03:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 04:09:43] -rwxr-xr-x. 1 boinc boinc      7986 Oct 13 03:00 run_atlas
[2025-10-13 04:09:43] -rw-r--r--. 1 boinc boinc       105 Oct 13 03:00 job.xml
[2025-10-13 04:09:43] -rw-r--r--. 2 boinc boinc     15120 Oct 13 03:00 start_atlas.sh
[2025-10-13 04:09:43] drwxrwx--x. 2 boinc boinc        68 Oct 13 03:00 shared
[2025-10-13 04:09:43] -rw-r--r--. 2 boinc boinc    569683 Oct 13 03:00 input.tar.gz
[2025-10-13 04:09:43] -rw-r--r--. 1 boinc boinc      9509 Oct 13 03:00 init_data.xml
[2025-10-13 04:09:43] -rw-r--r--. 2 boinc boinc 220873095 Oct 13 03:00 EVNT.46676267._004523.pool.root.1
[2025-10-13 04:09:43] -rw-r--r--. 1 boinc boinc         0 Oct 13 03:00 boinc_lockfile
[2025-10-13 04:09:43] -rw-r--r--. 1 boinc boinc      2550 Oct 13 03:00 pandaJob.out
[2025-10-13 04:09:43] -rw-------. 1 boinc boinc    975528 Oct 13 03:00 agis_schedconf.cvmfs.json
[2025-10-13 04:09:43] -rw-------. 1 boinc boinc   1560580 Oct 13 03:00 agis_ddmendpoints.agis.ALL.json
[2025-10-13 04:09:43] drwx------. 5 boinc boinc      4096 Oct 13 03:00 pilot3
[2025-10-13 04:09:43] -rw-------. 1 boinc boinc 194354515 Oct 13 04:07 HITS.46676269._073011.pool.root.1
[2025-10-13 04:09:43] -rw-r--r--. 1 boinc boinc       529 Oct 13 04:07 boinc_task_state.xml
[2025-10-13 04:09:43] -rw-------. 1 boinc boinc      1021 Oct 13 04:07 memory_monitor_summary.json
[2025-10-13 04:09:43] -rw-------. 1 boinc boinc    294375 Oct 13 04:07 log.46676269._073011.job.log.tgz.1
[2025-10-13 04:09:43] -rw-------. 1 boinc boinc        95 Oct 13 04:08 pilot_heartbeat.json
[2025-10-13 04:09:43] -rw-------. 1 boinc boinc      7765 Oct 13 04:09 heartbeat.json
[2025-10-13 04:09:43] -rw-r--r--. 1 boinc boinc        27 Oct 13 04:09 wrapper_checkpoint.txt
[2025-10-13 04:09:43] -rw-r--r--. 1 boinc boinc      8192 Oct 13 04:09 boinc_mmap_file
[2025-10-13 04:09:43] -rw-------. 1 boinc boinc       937 Oct 13 04:09 pilotlog.txt
[2025-10-13 04:09:43] -rw-------. 1 boinc boinc    625368 Oct 13 04:09 log.46676269._073011.job.log.1
[2025-10-13 04:09:43] -rw-------. 1 boinc boinc       357 Oct 13 04:09 output.list
[2025-10-13 04:09:43] -rw-r--r--. 1 boinc boinc       620 Oct 13 04:09 runtime_log
[2025-10-13 04:09:43] -rw-------. 1 boinc boinc    942080 Oct 13 04:09 result.tar.gz
[2025-10-13 04:09:43] -rw-r--r--. 1 boinc boinc      8661 Oct 13 04:09 runtime_log.err
[2025-10-13 04:09:43] -rw-------. 1 boinc boinc       642 Oct 13 04:09 DNkNDmI14R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm3viNDm9VDRSo.diag
[2025-10-13 04:09:43] -rw-r--r--. 1 boinc boinc     21955 Oct 13 04:09 stderr.txt
[2025-10-13 04:09:43] HITS file was successfully produced:
[2025-10-13 04:09:43] -rw-------. 1 boinc boinc 194354515 Oct 13 04:07 shared/HITS.pool.root.1
[2025-10-13 04:09:43]  *** Contents of shared directory: ***
[2025-10-13 04:09:43] total 406996
[2025-10-13 04:09:43] -rw-r--r--. 2 boinc boinc     15120 Oct 13 03:00 start_atlas.sh
[2025-10-13 04:09:43] -rw-r--r--. 2 boinc boinc    569683 Oct 13 03:00 input.tar.gz
[2025-10-13 04:09:43] -rw-r--r--. 2 boinc boinc 220873095 Oct 13 03:00 ATLAS.root_0
[2025-10-13 04:09:43] -rw-------. 1 boinc boinc 194354515 Oct 13 04:07 HITS.pool.root.1
[2025-10-13 04:09:43] -rw-------. 1 boinc boinc    942080 Oct 13 04:09 result.tar.gz
04:09:44 (4049287): run_atlas exited; CPU time 21814.440998
04:09:44 (4049287): called boinc_finish(0)

</stderr_txt>
]]>

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