Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
15:54:34 (200375): wrapper (7.7.26015): starting
15:54:34 (200375): wrapper: running run_atlas (--nthreads 3)
[2025-10-12 15:54:34] Arguments: --nthreads 3
[2025-10-12 15:54:34] Threads: 3
[2025-10-12 15:54:34] Checking for CVMFS
[2025-10-12 15:54:34] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 15:54:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 15:54:34] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 15:54:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 15:54:34] 2.9.2.0 2543460 4407 83644 151621 3 57 4158711 36864000 0 130560 0 3415312 99.991 149527 971 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-12 15:54:34] CVMFS is ok
[2025-10-12 15:54:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 15:54:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 15:54:34] Further information can be found at the LHC@home message board.
[2025-10-12 15:54:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 15:54:34] Checking for apptainer binary...
[2025-10-12 15:54:34] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 15:54:34] Running /usr/bin/apptainer --version
[2025-10-12 15:54:35] apptainer version 1.4.1-1.1
[2025-10-12 15:54:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 15:54:35] cosA125b
[2025-10-12 15:54:35] apptainer works
[2025-10-12 15:54:35] Set ATHENA_PROC_NUMBER=3
[2025-10-12 15:54:35] Set ATHENA_CORE_NUMBER=3
[2025-10-12 15:54:35] Starting ATLAS job with PandaID=6839865953
[2025-10-12 15:54:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 17:23:53]  *** The last 200 lines of the pilot log: ***
[2025-10-12 17:23:53]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6839865953/log.46676269._075688.job.log.tgz.1
[2025-10-12 17:23:53]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d6/54/log.46676269._075688.job.log.tgz.1
[2025-10-12 17:23:53]  workdir=None
[2025-10-12 17:23:53] ]
[2025-10-12 17:23:53] 2025-10-12 15:23:04,963 | INFO     | transferring file log.46676269._075688.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6839865953/log.46676269._075688.job.log.tgz.1 to /local/data/boinc/
[2025-10-12 17:23:53] 2025-10-12 15:23:04,963 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6839865953/log.46676269._075688.job.log.tgz.1 /local/data/boinc/slots/0/log.46676269._0756
[2025-10-12 17:23:53] 2025-10-12 15:23:04,975 | INFO     | adding to output.list: log.46676269._075688.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d6/54/log.46676269._075688.job.log.tg
[2025-10-12 17:23:53] 2025-10-12 15:23:04,975 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 17:23:53] 2025-10-12 15:23:04,975 | INFO     | summary of transferred files:
[2025-10-12 17:23:53] 2025-10-12 15:23:04,975 | INFO     |  -- lfn=log.46676269._075688.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 17:23:53] 2025-10-12 15:23:04,975 | INFO     | stage-out finished correctly
[2025-10-12 17:23:53] 2025-10-12 15:23:05,329 | INFO     | time since job start (5305s) is within the limit (172800.0s)
[2025-10-12 17:23:53] 2025-10-12 15:23:07,024 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 17:23:53] 2025-10-12 15:23:07,335 | INFO     | time since job start (5307s) is within the limit (172800.0s)
[2025-10-12 17:23:53] 2025-10-12 15:23:07,435 | WARNING  | process 210565 can no longer be monitored (due to stat problems) - aborting
[2025-10-12 17:23:53] 2025-10-12 15:23:07,435 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6839865953/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 17:23:53] 2025-10-12 15:23:07,480 | INFO     | number of running child processes to parent process 210565: 1
[2025-10-12 17:23:53] 2025-10-12 15:23:07,481 | INFO     | maximum number of monitored processes: 6
[2025-10-12 17:23:53] 2025-10-12 15:23:09,340 | INFO     | time since job start (5309s) is within the limit (172800.0s)
[2025-10-12 17:23:53] 2025-10-12 15:23:09,501 | INFO     | job 6839865953 has state=finished
[2025-10-12 17:23:53] 2025-10-12 15:23:09,502 | INFO     | preparing for final server update for job 6839865953 in state='finished'
[2025-10-12 17:23:53] 2025-10-12 15:23:09,502 | INFO     | this job has now completed (state=finished)
[2025-10-12 17:23:53] 2025-10-12 15:23:09,502 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 17:23:53] 2025-10-12 15:23:09,502 | INFO     | log transfer has been attempted: DONE
[2025-10-12 17:23:53] 2025-10-12 15:23:09,502 | INFO     | job 6839865953 has finished - writing final server update
[2025-10-12 17:23:53] 2025-10-12 15:23:09,502 | INFO     | total number of processed events: 400 (read)
[2025-10-12 17:23:53] 2025-10-12 15:23:09,503 | INFO     | executing command: lscpu
[2025-10-12 17:23:53] 2025-10-12 15:23:09,515 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 17:23:53] 2025-10-12 15:23:09,983 | INFO     | monitor loop #407: job 0:6839865953 is in state 'finished'
[2025-10-12 17:23:53] 2025-10-12 15:23:09,984 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 17:23:53] 2025-10-12 15:23:10,410 | INFO     | PID=204098 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-12 17:23:53] 2025-10-12 15:23:11,411 | INFO     | time since job start (5311s) is within the limit (172800.0s)
[2025-10-12 17:23:53] 2025-10-12 15:23:11,411 | INFO     | 5311s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-10-12 17:23:53] 2025-10-12 15:23:12,486 | INFO     | monitor loop #408: job 0:6839865953 is in state 'finished'
[2025-10-12 17:23:53] 2025-10-12 15:23:12,486 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 17:23:53] 2025-10-12 15:23:13,416 | INFO     | time since job start (5313s) is within the limit (172800.0s)
[2025-10-12 17:23:53] 2025-10-12 15:23:13,769 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-12 17:23:53] 2025-10-12 15:23:13,770 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 3855.602833333333
[2025-10-12 17:23:53] 2025-10-12 15:23:13,771 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6839865953/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 17:23:53] 2025-10-12 15:23:13,771 | INFO     | extracted standard info from prmon json
[2025-10-12 17:23:53] 2025-10-12 15:23:13,771 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 17:23:53] 2025-10-12 15:23:13,771 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 17:23:53] 2025-10-12 15:23:13,772 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 17:23:53] 2025-10-12 15:23:13,772 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 17:23:53] 2025-10-12 15:23:13,772 | INFO     | fitting pss+swap vs Time
[2025-10-12 17:23:53] 2025-10-12 15:23:13,772 | INFO     | sum of square deviations: 158737860.0
[2025-10-12 17:23:53] 2025-10-12 15:23:13,772 | INFO     | sum of deviations: -2959728204.5
[2025-10-12 17:23:53] 2025-10-12 15:23:13,772 | INFO     | mean x: 1760280014.5
[2025-10-12 17:23:53] 2025-10-12 15:23:13,773 | INFO     | mean y: 2385342.5625
[2025-10-12 17:23:53] 2025-10-12 15:23:13,773 | INFO     | -- intersect: 32823480491.08799
[2025-10-12 17:23:53] 2025-10-12 15:23:13,773 | INFO     | intersect: 32823480491.08799
[2025-10-12 17:23:53] 2025-10-12 15:23:13,773 | INFO     | chi2: 0.06689479391756474
[2025-10-12 17:23:53] 2025-10-12 15:23:13,773 | INFO     | -- intersect: 32823480491.08799
[2025-10-12 17:23:53] 2025-10-12 15:23:13,773 | INFO     | current memory leak: -18.65 B/s (using 80 data points, chi2=0.07)
[2025-10-12 17:23:53] 2025-10-12 15:23:13,773 | INFO     | could have reported an average CPU frequency of 3928 MHz (6 samples)
[2025-10-12 17:23:53] 2025-10-12 15:23:13,773 | INFO     | ..............................
[2025-10-12 17:23:53] 2025-10-12 15:23:13,773 | INFO     | . Timing measurements:
[2025-10-12 17:23:53] 2025-10-12 15:23:13,773 | INFO     | . get job = 0 s
[2025-10-12 17:23:53] 2025-10-12 15:23:13,773 | INFO     | . initial setup = 1 s
[2025-10-12 17:23:53] 2025-10-12 15:23:13,773 | INFO     | . payload setup = 2 s
[2025-10-12 17:23:53] 2025-10-12 15:23:13,773 | INFO     | . stage-in = 0 s
[2025-10-12 17:23:53] 2025-10-12 15:23:13,773 | INFO     | . payload execution = 5284 s
[2025-10-12 17:23:53] 2025-10-12 15:23:13,773 | INFO     | . stage-out = 0 s
[2025-10-12 17:23:53] 2025-10-12 15:23:13,773 | INFO     | . log creation = 0 s
[2025-10-12 17:23:53] 2025-10-12 15:23:13,773 | INFO     | ..............................
[2025-10-12 17:23:53] 2025-10-12 15:23:13,804 | INFO     | 
[2025-10-12 17:23:53] 2025-10-12 15:23:13,804 | INFO     | job summary report
[2025-10-12 17:23:53] 2025-10-12 15:23:13,804 | INFO     | --------------------------------------------------
[2025-10-12 17:23:53] 2025-10-12 15:23:13,804 | INFO     | PanDA job id: 6839865953
[2025-10-12 17:23:53] 2025-10-12 15:23:13,804 | INFO     | task id: 46676269
[2025-10-12 17:23:53] 2025-10-12 15:23:13,804 | INFO     | errors: (none)
[2025-10-12 17:23:53] 2025-10-12 15:23:13,804 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 17:23:53] 2025-10-12 15:23:13,804 | INFO     | pilot state: finished 
[2025-10-12 17:23:53] 2025-10-12 15:23:13,804 | INFO     | transexitcode: 0
[2025-10-12 17:23:53] 2025-10-12 15:23:13,804 | INFO     | exeerrorcode: 0
[2025-10-12 17:23:53] 2025-10-12 15:23:13,804 | INFO     | exeerrordiag: 
[2025-10-12 17:23:53] 2025-10-12 15:23:13,804 | INFO     | exitcode: 0
[2025-10-12 17:23:53] 2025-10-12 15:23:13,804 | INFO     | exitmsg: OK
[2025-10-12 17:23:53] 2025-10-12 15:23:13,804 | INFO     | cpuconsumptiontime: 15204 s
[2025-10-12 17:23:53] 2025-10-12 15:23:13,804 | INFO     | nevents: 400
[2025-10-12 17:23:53] 2025-10-12 15:23:13,804 | INFO     | neventsw: 0
[2025-10-12 17:23:53] 2025-10-12 15:23:13,804 | INFO     | pid: 210565
[2025-10-12 17:23:53] 2025-10-12 15:23:13,804 | INFO     | pgrp: 210565
[2025-10-12 17:23:53] 2025-10-12 15:23:13,804 | INFO     | corecount: 3
[2025-10-12 17:23:53] 2025-10-12 15:23:13,804 | INFO     | event service: False
[2025-10-12 17:23:53] 2025-10-12 15:23:13,804 | INFO     | sizes: {0: 2348860, 2: 2349122, 10: 2349150, 5290: 2375827, 5291: 2384831, 5293: 2384887, 5300: 2385209}
[2025-10-12 17:23:53] 2025-10-12 15:23:13,804 | INFO     | --------------------------------------------------
[2025-10-12 17:23:53] 2025-10-12 15:23:13,804 | INFO     | 
[2025-10-12 17:23:53] 2025-10-12 15:23:13,804 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-10-12 17:23:53] 2025-10-12 15:23:13,815 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 17:23:53] 2025-10-12 15:23:13,816 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 17:23:53] 2025-10-12 15:23:13,816 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 17:23:53] 2025-10-12 15:23:13,816 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 17:23:53] 2025-10-12 15:23:13,816 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 17:23:53] 2025-10-12 15:23:13,816 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 17:23:53] 2025-10-12 15:23:13,816 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 17:23:53] 2025-10-12 15:23:13,816 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 17:23:53] 2025-10-12 15:23:13,816 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 17:23:53] 2025-10-12 15:23:13,816 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 17:23:53] 2025-10-12 15:23:13,816 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 17:23:53] 2025-10-12 15:23:13,816 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 17:23:53] 2025-10-12 15:23:13,816 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 17:23:53] 2025-10-12 15:23:13,816 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 17:23:53] 2025-10-12 15:23:13,816 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 17:23:53] 2025-10-12 15:23:13,816 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 17:23:53] 2025-10-12 15:23:13,816 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 17:23:53] 2025-10-12 15:23:13,816 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 17:23:53] 2025-10-12 15:23:13,816 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 17:23:53] 2025-10-12 15:23:13,816 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 17:23:53] 2025-10-12 15:23:13,816 | INFO     | job 6839865953 has completed (purged errors)
[2025-10-12 17:23:53] 2025-10-12 15:23:13,816 | INFO     | overall cleanup function is called
[2025-10-12 17:23:53] 2025-10-12 15:23:14,822 | INFO     | --- collectZombieJob: --- 10, [210565]
[2025-10-12 17:23:53] 2025-10-12 15:23:14,822 | INFO     | zombie collector waiting for pid 210565
[2025-10-12 17:23:53] 2025-10-12 15:23:14,822 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 17:23:53] 2025-10-12 15:23:14,822 | INFO     | collected zombie processes
[2025-10-12 17:23:53] 2025-10-12 15:23:14,822 | INFO     | will attempt to kill all subprocesses of pid=210565
[2025-10-12 17:23:53] 2025-10-12 15:23:14,872 | INFO     | process IDs to be killed: [210565] (in reverse order)
[2025-10-12 17:23:53] 2025-10-12 15:23:14,898 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 17:23:53] 2025-10-12 15:23:14,899 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 17:23:53] 2025-10-12 15:23:14,900 | INFO     | did not find any defunct processes belonging to 210565
[2025-10-12 17:23:53] 2025-10-12 15:23:14,902 | INFO     | did not find any defunct processes belonging to 210565
[2025-10-12 17:23:53] 2025-10-12 15:23:14,902 | INFO     | ready for new job
[2025-10-12 17:23:53] 2025-10-12 15:23:14,902 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 17:23:53] 2025-10-12 15:23:14,903 | INFO     | ***************************************
[2025-10-12 17:23:53] 2025-10-12 15:23:14,903 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 17:23:53] 2025-10-12 15:23:14,903 | INFO     | ***************************************
[2025-10-12 17:23:53] 2025-10-12 15:23:14,903 | INFO     | 
[2025-10-12 17:23:53] 2025-10-12 15:23:14,903 | INFO     | architecture information:
[2025-10-12 17:23:53] 2025-10-12 15:23:14,903 | INFO     | executing command: cat /etc/os-release
[2025-10-12 17:23:53] 2025-10-12 15:23:14,911 | INFO     | cat /etc/os-release:
[2025-10-12 17:23:53] NAME="CentOS Linux"
[2025-10-12 17:23:53] VERSION="7 (Core)"
[2025-10-12 17:23:53] ID="centos"
[2025-10-12 17:23:53] ID_LIKE="rhel fedora"
[2025-10-12 17:23:53] VERSION_ID="7"
[2025-10-12 17:23:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 17:23:53] ANSI_COLOR="0;31"
[2025-10-12 17:23:53] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 17:23:53] HOME_URL="https://www.centos.org/"
[2025-10-12 17:23:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 17:23:53] 
[2025-10-12 17:23:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 17:23:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 17:23:53] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 17:23:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 17:23:53] 
[2025-10-12 17:23:53] 2025-10-12 15:23:14,912 | INFO     | ***************************************
[2025-10-12 17:23:53] 2025-10-12 15:23:15,414 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-12 17:23:53] 2025-10-12 15:23:15,424 | INFO     | sufficient remaining disk space (357835997184 B)
[2025-10-12 17:23:53] 2025-10-12 15:23:15,424 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 17:23:53] 2025-10-12 15:23:15,424 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 17:23:53] 2025-10-12 15:23:15,424 | INFO     | update_server=False
[2025-10-12 17:23:53] 2025-10-12 15:23:15,424 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 17:23:53] 2025-10-12 15:23:15,424 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 17:23:53] 2025-10-12 15:23:15,518 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 17:23:53] 2025-10-12 15:23:15,994 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 17:23:53] 2025-10-12 15:23:15,994 | INFO     | aborting loop
[2025-10-12 17:23:53] 2025-10-12 15:23:16,081 | INFO     | all data control threads have been joined
[2025-10-12 17:23:53] 2025-10-12 15:23:16,184 | INFO     | all job control threads have been joined
[2025-10-12 17:23:53] 2025-10-12 15:23:16,305 | INFO     | all payload control threads have been joined
[2025-10-12 17:23:53] 2025-10-12 15:23:16,429 | INFO     | [job] retrieve thread has finished
[2025-10-12 17:23:53] 2025-10-12 15:23:16,430 | INFO     | [job] queue monitor thread has finished
[2025-10-12 17:23:53] 2025-10-12 15:23:16,748 | INFO     | [payload] failed_post thread has finished
[2025-10-12 17:23:53] 2025-10-12 15:23:17,000 | INFO     | [job] job monitor thread has finished
[2025-10-12 17:23:53] 2025-10-12 15:23:17,086 | INFO     | [data] control thread has finished
[2025-10-12 17:23:53] 2025-10-12 15:23:17,144 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 17:23:53] 2025-10-12 15:23:17,166 | INFO     | [data] copytool_in thread has finished
[2025-10-12 17:23:53] 2025-10-12 15:23:17,190 | INFO     | [job] control thread has finished
[2025-10-12 17:23:53] 2025-10-12 15:23:17,310 | INFO     | [payload] control thread has finished
[2025-10-12 17:23:53] 2025-10-12 15:23:17,524 | INFO     | [data] copytool_out thread has finished
[2025-10-12 17:23:53] 2025-10-12 15:23:17,561 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 17:23:53] 2025-10-12 15:23:17,741 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 17:23:53] 2025-10-12 15:23:17,744 | INFO     | [job] validate thread has finished
[2025-10-12 17:23:53] 2025-10-12 15:23:17,859 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 17:23:53] 2025-10-12 15:23:17,978 | INFO     | [payload] validate_post thread has finished
[2025-10-12 17:23:53] 2025-10-12 15:23:21,567 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 17:23:53] 2025-10-12 15:23:26,387 | INFO     | job.realtimelogging is not enabled
[2025-10-12 17:23:53] 2025-10-12 15:23:27,393 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 17:23:53] 2025-10-12 15:23:46,560 | INFO     | PID=204098 has CPU usage=0.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-12 17:23:53] 2025-10-12 15:23:46,560 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 17:23:53] 2025-10-12 15:23:46,560 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 17:23:53] 2025-10-12 15:23:46,560 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 17:23:53] 2025-10-12 15:23:46,771 | INFO     | [monitor] cgroup control has ended
[2025-10-12 17:23:53] 2025-10-12 15:23:48,680 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140687326717760)>', '<ExcThread(monitor, started 140686468830976)>']
[2025-10-12 17:23:53] 2025-10-12 15:23:49,572 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 17:23:53] 2025-10-12 15:23:49,572 | INFO     | [monitor] control thread has ended
[2025-10-12 17:23:53] 2025-10-12 15:23:53,682 | INFO     | all workflow threads have been joined
[2025-10-12 17:23:53] 2025-10-12 15:23:53,682 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 17:23:53] 2025-10-12 15:23:53,683 | INFO     | traces error code: 0
[2025-10-12 17:23:53] 2025-10-12 15:23:53,683 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 17:23:53] 2025-10-12 15:23:53,730 [wrapper] ==== pilot stdout END ====
[2025-10-12 17:23:53] 2025-10-12 15:23:53,732 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 17:23:53] 2025-10-12 15:23:53,734 [wrapper] pilotpid: 204098
[2025-10-12 17:23:53] 2025-10-12 15:23:53,737 [wrapper] Pilot exit status: 0
[2025-10-12 17:23:53] 2025-10-12 15:23:53,744 [wrapper] pandaids: 6839865953
[2025-10-12 17:23:53] 2025-10-12 15:23:53,761 [wrapper] cleanup supervisor_pilot  232500 204099
[2025-10-12 17:23:53] 2025-10-12 15:23:53,764 [wrapper] Test setup, not cleaning
[2025-10-12 17:23:53] 2025-10-12 15:23:53,766 [wrapper] apfmon messages muted
[2025-10-12 17:23:53] 2025-10-12 15:23:53,768 [wrapper] ==== wrapper stdout END ====
[2025-10-12 17:23:53] 2025-10-12 15:23:53,770 [wrapper] ==== wrapper stderr END ====
[2025-10-12 17:23:53]  *** Error codes and diagnostics ***
[2025-10-12 17:23:53]     "exeErrorCode": 0,
[2025-10-12 17:23:53]     "exeErrorDiag": "",
[2025-10-12 17:23:53]     "pilotErrorCode": 0,
[2025-10-12 17:23:53]     "pilotErrorDiag": "",
[2025-10-12 17:23:53]  *** Listing of results directory ***
[2025-10-12 17:23:53] total 419748
[2025-10-12 17:23:53] -rw-r--r-- 1 boinc boinc    557409 Oct 12 11:51 pilot3.tar.gz
[2025-10-12 17:23:53] -rwx------ 1 boinc boinc     36292 Oct 12 12:02 runpilot2-wrapper.sh
[2025-10-12 17:23:53] -rw-r--r-- 1 boinc boinc      5112 Oct 12 12:02 queuedata.json
[2025-10-12 17:23:53] -rw-r--r-- 1 boinc boinc       100 Oct 12 15:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 17:23:53] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 15:54 run_atlas
[2025-10-12 17:23:53] -rw-r--r-- 1 boinc boinc       105 Oct 12 15:54 job.xml
[2025-10-12 17:23:53] -rw-r--r-- 2 boinc boinc 221468151 Oct 12 15:54 EVNT.46676267._003601.pool.root.1
[2025-10-12 17:23:53] -rw-r--r-- 2 boinc boinc    569678 Oct 12 15:54 input.tar.gz
[2025-10-12 17:23:53] -rw-r--r-- 2 boinc boinc     15120 Oct 12 15:54 start_atlas.sh
[2025-10-12 17:23:53] drwxrwx--x 2 boinc boinc      4096 Oct 12 15:54 shared
[2025-10-12 17:23:53] -rw-r--r-- 1 boinc boinc         0 Oct 12 15:54 boinc_setup_complete
[2025-10-12 17:23:53] -rw-r--r-- 1 boinc boinc      6441 Oct 12 15:54 init_data.xml
[2025-10-12 17:23:53] -rw-r--r-- 1 boinc boinc         0 Oct 12 15:54 boinc_lockfile
[2025-10-12 17:23:53] -rw-r--r-- 1 boinc boinc      2550 Oct 12 15:54 pandaJob.out
[2025-10-12 17:23:53] -rw------- 1 boinc boinc    975528 Oct 12 15:54 agis_schedconf.cvmfs.json
[2025-10-12 17:23:53] -rw------- 1 boinc boinc   1560580 Oct 12 15:54 agis_ddmendpoints.agis.ALL.json
[2025-10-12 17:23:53] drwx------ 5 boinc boinc      4096 Oct 12 15:54 pilot3
[2025-10-12 17:23:53] -rw------- 1 boinc boinc 202352591 Oct 12 17:22 HITS.46676269._075688.pool.root.1
[2025-10-12 17:23:53] -rw-r--r-- 1 boinc boinc       529 Oct 12 17:22 boinc_task_state.xml
[2025-10-12 17:23:53] -rw------- 1 boinc boinc      1020 Oct 12 17:23 memory_monitor_summary.json
[2025-10-12 17:23:53] -rw------- 1 boinc boinc    271938 Oct 12 17:23 log.46676269._075688.job.log.tgz.1
[2025-10-12 17:23:53] -rw------- 1 boinc boinc        95 Oct 12 17:23 pilot_heartbeat.json
[2025-10-12 17:23:53] -rw------- 1 boinc boinc      7765 Oct 12 17:23 heartbeat.json
[2025-10-12 17:23:53] -rw-r--r-- 1 boinc boinc      8192 Oct 12 17:23 boinc_mmap_file
[2025-10-12 17:23:53] -rw-r--r-- 1 boinc boinc        27 Oct 12 17:23 wrapper_checkpoint.txt
[2025-10-12 17:23:53] -rw------- 1 boinc boinc      4823 Oct 12 17:23 pilotlog.txt
[2025-10-12 17:23:53] -rw------- 1 boinc boinc    775717 Oct 12 17:23 log.46676269._075688.job.log.1
[2025-10-12 17:23:53] -rw------- 1 boinc boinc       357 Oct 12 17:23 output.list
[2025-10-12 17:23:53] -rw-r--r-- 1 boinc boinc       620 Oct 12 17:23 runtime_log
[2025-10-12 17:23:53] -rw------- 1 boinc boinc   1064960 Oct 12 17:23 result.tar.gz
[2025-10-12 17:23:53] -rw-r--r-- 1 boinc boinc      8787 Oct 12 17:23 runtime_log.err
[2025-10-12 17:23:53] -rw------- 1 boinc boinc       660 Oct 12 17:23 WEXMDmh57R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmJPjNDmVetwen.diag
[2025-10-12 17:23:53] -rw-r--r-- 1 boinc boinc     22360 Oct 12 17:23 stderr.txt
[2025-10-12 17:23:53] HITS file was successfully produced:
[2025-10-12 17:23:53] -rw------- 1 boinc boinc 202352591 Oct 12 17:22 shared/HITS.pool.root.1
[2025-10-12 17:23:53]  *** Contents of shared directory: ***
[2025-10-12 17:23:53] total 415516
[2025-10-12 17:23:53] -rw-r--r-- 2 boinc boinc 221468151 Oct 12 15:54 ATLAS.root_0
[2025-10-12 17:23:53] -rw-r--r-- 2 boinc boinc    569678 Oct 12 15:54 input.tar.gz
[2025-10-12 17:23:53] -rw-r--r-- 2 boinc boinc     15120 Oct 12 15:54 start_atlas.sh
[2025-10-12 17:23:53] -rw------- 1 boinc boinc 202352591 Oct 12 17:22 HITS.pool.root.1
[2025-10-12 17:23:53] -rw------- 1 boinc boinc   1064960 Oct 12 17:23 result.tar.gz
17:23:55 (200375): run_atlas exited; CPU time 15231.763179
17:23:55 (200375): called boinc_finish(0)

</stderr_txt>
]]>

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