Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:27:58 (2229974): wrapper (7.7.26015): starting
18:27:58 (2229974): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 18:27:58] Arguments: --nthreads 8
[2025-10-12 18:27:58] Threads: 8
[2025-10-12 18:27:58] Checking for CVMFS
[2025-10-12 18:27:58] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 18:27:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 18:27:58] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 18:27:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 18:27:58] 2.13.2.0 129583 118155 316516 151640 1 64 36800815 40960001 8119 16776704 0 72389765 99.761 40371477 30144 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 18:27:58] CVMFS is ok
[2025-10-12 18:27:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 18:27:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 18:27:58] Further information can be found at the LHC@home message board.
[2025-10-12 18:27:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 18:27:58] Checking for apptainer binary...
[2025-10-12 18:27:58] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 18:27:58] Running /usr/bin/apptainer --version
[2025-10-12 18:27:59] apptainer version 1.4.3-1.el9
[2025-10-12 18:27:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 18:27:59] c-211-14.aglt2.org
[2025-10-12 18:27:59] apptainer works
[2025-10-12 18:27:59] Set ATHENA_PROC_NUMBER=8
[2025-10-12 18:27:59] Set ATHENA_CORE_NUMBER=8
[2025-10-12 18:27:59] Starting ATLAS job with PandaID=6839865884
[2025-10-12 18:27:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 00:01:37]  *** The last 200 lines of the pilot log: ***
[2025-10-13 00:01:37] 2025-10-13 03:25:02,128 | INFO     | found 24 cores (12 cores per socket, 2 sockets) HT, CPU MHz: 2400.003854166667
[2025-10-13 00:01:37] 2025-10-13 03:25:02,164 | INFO     | monitor loop #670: job 0:6839865884 is in state 'finished'
[2025-10-13 00:01:37] 2025-10-13 03:25:02,164 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 00:01:37] 2025-10-13 03:25:02,238 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6839865884/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 00:01:37] 2025-10-13 03:25:02,239 | INFO     | extracted standard info from prmon json
[2025-10-13 00:01:37] 2025-10-13 03:25:02,239 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 00:01:37] 2025-10-13 03:25:02,240 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 00:01:37] 2025-10-13 03:25:02,256 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 00:01:37] 2025-10-13 03:25:02,256 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 00:01:37] 2025-10-13 03:25:02,322 | INFO     | fitting pss+swap vs Time
[2025-10-13 00:01:37] 2025-10-13 03:25:02,323 | INFO     | sum of square deviations: 7562526392.003474
[2025-10-13 00:01:37] 2025-10-13 03:25:02,349 | INFO     | sum of deviations: -92018282865.06204
[2025-10-13 00:01:37] 2025-10-13 03:25:02,349 | INFO     | mean x: 1760317029.9413793
[2025-10-13 00:01:37] 2025-10-13 03:25:02,350 | INFO     | mean y: 2573421.0551724136
[2025-10-13 00:01:37] 2025-10-13 03:25:02,350 | INFO     | -- intersect: 21421520211.721436
[2025-10-13 00:01:37] 2025-10-13 03:25:02,350 | INFO     | intersect: 21421520211.721436
[2025-10-13 00:01:37] 2025-10-13 03:25:02,390 | INFO     | chi2: 3.028020663532715
[2025-10-13 00:01:37] 2025-10-13 03:25:02,391 | INFO     | sum of square deviations: 7178102408.512259
[2025-10-13 00:01:37] 2025-10-13 03:25:02,426 | INFO     | sum of deviations: -71618767944.83162
[2025-10-13 00:01:37] 2025-10-13 03:25:02,427 | INFO     | mean x: 1760316877.449123
[2025-10-13 00:01:37] 2025-10-13 03:25:02,427 | INFO     | mean y: 2581411.8736842107
[2025-10-13 00:01:37] 2025-10-13 03:25:02,427 | INFO     | -- intersect: 17565959416.330032
[2025-10-13 00:01:37] 2025-10-13 03:25:02,427 | INFO     | intersect: 17565959416.330032
[2025-10-13 00:01:37] 2025-10-13 03:25:02,428 | INFO     | chi2: 2.3534504133599423
[2025-10-13 00:01:37] 2025-10-13 03:25:02,428 | INFO     | current chi2=2.3534504133599423 (change=22.277597319490177 %)
[2025-10-13 00:01:37] 2025-10-13 03:25:02,428 | INFO     | right removable region: 284
[2025-10-13 00:01:37] 2025-10-13 03:25:02,429 | INFO     | sum of square deviations: 7178024328.512259
[2025-10-13 00:01:37] 2025-10-13 03:25:02,432 | INFO     | sum of deviations: -146195142311.0035
[2025-10-13 00:01:37] 2025-10-13 03:25:02,432 | INFO     | mean x: 1760317182.449123
[2025-10-13 00:01:37] 2025-10-13 03:25:02,432 | INFO     | mean y: 2594768.585964912
[2025-10-13 00:01:37] 2025-10-13 03:25:02,432 | INFO     | -- intersect: 35855053498.548706
[2025-10-13 00:01:37] 2025-10-13 03:25:02,432 | INFO     | intersect: 35855053498.548706
[2025-10-13 00:01:37] 2025-10-13 03:25:02,433 | INFO     | chi2: 1.2214434074670781
[2025-10-13 00:01:37] 2025-10-13 03:25:02,433 | INFO     | current chi2=1.2214434074670781 (change=59.661985726278 %)
[2025-10-13 00:01:37] 2025-10-13 03:25:02,434 | INFO     | sum of square deviations: 6806778327.485724
[2025-10-13 00:01:37] 2025-10-13 03:25:02,436 | INFO     | sum of deviations: -145060375292.07147
[2025-10-13 00:01:37] 2025-10-13 03:25:02,437 | INFO     | mean x: 1760317334.9571428
[2025-10-13 00:01:37] 2025-10-13 03:25:02,437 | INFO     | mean y: 2594278.910714286
[2025-10-13 00:01:37] 2025-10-13 03:25:02,437 | INFO     | -- intersect: 37517007259.11772
[2025-10-13 00:01:37] 2025-10-13 03:25:02,437 | INFO     | intersect: 37517007259.11772
[2025-10-13 00:01:37] 2025-10-13 03:25:02,438 | INFO     | chi2: 1.1940913723547117
[2025-10-13 00:01:37] 2025-10-13 03:25:02,438 | INFO     | current chi2=1.1940913723547117 (change=2.2393207041074983 %)
[2025-10-13 00:01:37] 2025-10-13 03:25:02,439 | INFO     | left removable region: 20
[2025-10-13 00:01:37] 2025-10-13 03:25:02,439 | INFO     | sum of square deviations: 5705338592.693166
[2025-10-13 00:01:37] 2025-10-13 03:25:02,441 | INFO     | sum of deviations: -98435629842.80678
[2025-10-13 00:01:37] 2025-10-13 03:25:02,442 | INFO     | mean x: 1760317456.965909
[2025-10-13 00:01:37] 2025-10-13 03:25:02,442 | INFO     | mean y: 2591641.132575758
[2025-10-13 00:01:37] 2025-10-13 03:25:02,442 | INFO     | -- intersect: 30373787808.463375
[2025-10-13 00:01:37] 2025-10-13 03:25:02,442 | INFO     | intersect: 30373787808.463375
[2025-10-13 00:01:37] 2025-10-13 03:25:02,443 | INFO     | chi2: 0.4644348657277463
[2025-10-13 00:01:37] 2025-10-13 03:25:02,443 | INFO     | -- intersect: 30373787808.463375
[2025-10-13 00:01:37] 2025-10-13 03:25:02,443 | INFO     | current memory leak: -17.25 B/s (using 264 data points, chi2=0.46)
[2025-10-13 00:01:37] 2025-10-13 03:25:02,444 | INFO     | could have reported an average CPU frequency of 2438 MHz (10 samples)
[2025-10-13 00:01:37] 2025-10-13 03:25:02,445 | INFO     | ..............................
[2025-10-13 00:01:37] 2025-10-13 03:25:02,445 | INFO     | . Timing measurements:
[2025-10-13 00:01:37] 2025-10-13 03:25:02,445 | INFO     | . get job = 0 s
[2025-10-13 00:01:37] 2025-10-13 03:25:02,445 | INFO     | . initial setup = 4 s
[2025-10-13 00:01:37] 2025-10-13 03:25:02,445 | INFO     | . payload setup = 24 s
[2025-10-13 00:01:37] 2025-10-13 03:25:02,445 | INFO     | . stage-in = 0 s
[2025-10-13 00:01:37] 2025-10-13 03:25:02,446 | INFO     | . payload execution = 17659 s
[2025-10-13 00:01:37] 2025-10-13 03:25:02,446 | INFO     | . stage-out = 2 s
[2025-10-13 00:01:37] 2025-10-13 03:25:02,446 | INFO     | . log creation = 0 s
[2025-10-13 00:01:37] 2025-10-13 03:25:02,446 | INFO     | ..............................
[2025-10-13 00:01:37] 2025-10-13 03:25:02,841 | INFO     | 
[2025-10-13 00:01:37] 2025-10-13 03:25:02,842 | INFO     | job summary report
[2025-10-13 00:01:37] 2025-10-13 03:25:02,842 | INFO     | --------------------------------------------------
[2025-10-13 00:01:37] 2025-10-13 03:25:02,842 | INFO     | PanDA job id: 6839865884
[2025-10-13 00:01:37] 2025-10-13 03:25:02,842 | INFO     | task id: 46676269
[2025-10-13 00:01:37] 2025-10-13 03:25:02,842 | INFO     | errors: (none)
[2025-10-13 00:01:37] 2025-10-13 03:25:02,842 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 00:01:37] 2025-10-13 03:25:02,843 | INFO     | pilot state: finished 
[2025-10-13 00:01:37] 2025-10-13 03:25:02,843 | INFO     | transexitcode: 0
[2025-10-13 00:01:37] 2025-10-13 03:25:02,844 | INFO     | exeerrorcode: 0
[2025-10-13 00:01:37] 2025-10-13 03:25:02,844 | INFO     | exeerrordiag: 
[2025-10-13 00:01:37] 2025-10-13 03:25:02,844 | INFO     | exitcode: 0
[2025-10-13 00:01:37] 2025-10-13 03:25:02,844 | INFO     | exitmsg: OK
[2025-10-13 00:01:37] 2025-10-13 03:25:02,844 | INFO     | cpuconsumptiontime: 61804 s
[2025-10-13 00:01:37] 2025-10-13 03:25:02,844 | INFO     | nevents: 400
[2025-10-13 00:01:37] 2025-10-13 03:25:02,845 | INFO     | neventsw: 0
[2025-10-13 00:01:37] 2025-10-13 03:25:02,845 | INFO     | pid: 2241765
[2025-10-13 00:01:37] 2025-10-13 03:25:02,845 | INFO     | pgrp: 2241765
[2025-10-13 00:01:37] 2025-10-13 03:25:02,845 | INFO     | corecount: 8
[2025-10-13 00:01:37] 2025-10-13 03:25:02,845 | INFO     | event service: False
[2025-10-13 00:01:37] 2025-10-13 03:25:02,845 | INFO     | sizes: {0: 2348630, 1: 2348686, 2: 2348742, 3: 2348941, 14: 2348941, 20: 2349231, 25: 2349387, 17687: 2378423, 17691: 2387421, 17693: 2387477, 17738: 2387671}
[2025-10-13 00:01:37] 2025-10-13 03:25:02,845 | INFO     | --------------------------------------------------
[2025-10-13 00:01:37] 2025-10-13 03:25:02,846 | INFO     | 
[2025-10-13 00:01:37] 2025-10-13 03:25:02,846 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-13 00:01:37] 2025-10-13 03:25:02,985 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 00:01:37] 2025-10-13 03:25:02,986 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 00:01:37] 2025-10-13 03:25:02,987 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 00:01:37] 2025-10-13 03:25:02,987 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 00:01:37] 2025-10-13 03:25:02,988 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 00:01:37] 2025-10-13 03:25:02,988 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 00:01:37] 2025-10-13 03:25:02,988 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 00:01:37] 2025-10-13 03:25:02,988 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 00:01:37] 2025-10-13 03:25:02,989 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 00:01:37] 2025-10-13 03:25:02,989 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 00:01:37] 2025-10-13 03:25:02,989 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 00:01:37] 2025-10-13 03:25:02,989 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 00:01:37] 2025-10-13 03:25:02,990 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 00:01:37] 2025-10-13 03:25:02,990 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 00:01:37] 2025-10-13 03:25:02,991 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 00:01:37] 2025-10-13 03:25:02,992 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 00:01:37] 2025-10-13 03:25:02,993 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 00:01:37] 2025-10-13 03:25:02,993 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 00:01:37] 2025-10-13 03:25:02,993 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 00:01:37] 2025-10-13 03:25:02,994 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 00:01:37] 2025-10-13 03:25:02,994 | INFO     | job 6839865884 has completed (purged errors)
[2025-10-13 00:01:37] 2025-10-13 03:25:02,994 | INFO     | overall cleanup function is called
[2025-10-13 00:01:37] 2025-10-13 03:25:03,421 | INFO     | PID=2233906 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 00:01:37] 2025-10-13 03:25:03,421 | INFO     | .. there are 9 such processes running
[2025-10-13 00:01:37] 2025-10-13 03:25:04,016 | INFO     | --- collectZombieJob: --- 10, [2241765]
[2025-10-13 00:01:37] 2025-10-13 03:25:04,016 | INFO     | zombie collector waiting for pid 2241765
[2025-10-13 00:01:37] 2025-10-13 03:25:04,016 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 00:01:37] 2025-10-13 03:25:04,016 | INFO     | collected zombie processes
[2025-10-13 00:01:37] 2025-10-13 03:25:04,016 | INFO     | will attempt to kill all subprocesses of pid=2241765
[2025-10-13 00:01:37] 2025-10-13 03:25:05,115 | INFO     | process IDs to be killed: [2241765] (in reverse order)
[2025-10-13 00:01:37] 2025-10-13 03:25:05,260 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 00:01:37] 2025-10-13 03:25:05,260 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 00:01:37] 2025-10-13 03:25:05,289 | INFO     | did not find any defunct processes belonging to 2241765
[2025-10-13 00:01:37] 2025-10-13 03:25:05,314 | INFO     | did not find any defunct processes belonging to 2241765
[2025-10-13 00:01:37] 2025-10-13 03:25:05,315 | INFO     | ready for new job
[2025-10-13 00:01:37] 2025-10-13 03:25:05,315 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 00:01:37] 2025-10-13 03:25:05,320 | INFO     | ***************************************
[2025-10-13 00:01:37] 2025-10-13 03:25:05,320 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 00:01:37] 2025-10-13 03:25:05,320 | INFO     | ***************************************
[2025-10-13 00:01:37] 2025-10-13 03:25:05,320 | INFO     | 
[2025-10-13 00:01:37] 2025-10-13 03:25:05,328 | INFO     | architecture information:
[2025-10-13 00:01:37] 2025-10-13 03:25:05,333 | INFO     | executing command: cat /etc/os-release
[2025-10-13 00:01:37] 2025-10-13 03:25:05,437 | INFO     | cat /etc/os-release:
[2025-10-13 00:01:37] NAME="CentOS Linux"
[2025-10-13 00:01:37] VERSION="7 (Core)"
[2025-10-13 00:01:37] ID="centos"
[2025-10-13 00:01:37] ID_LIKE="rhel fedora"
[2025-10-13 00:01:37] VERSION_ID="7"
[2025-10-13 00:01:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 00:01:37] ANSI_COLOR="0;31"
[2025-10-13 00:01:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 00:01:37] HOME_URL="https://www.centos.org/"
[2025-10-13 00:01:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 00:01:37] 
[2025-10-13 00:01:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 00:01:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 00:01:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 00:01:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 00:01:37] 
[2025-10-13 00:01:37] 2025-10-13 03:25:05,438 | INFO     | ***************************************
[2025-10-13 00:01:37] 2025-10-13 03:25:05,941 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-13 00:01:37] 2025-10-13 03:25:06,080 | INFO     | sufficient remaining disk space (62860034048 B)
[2025-10-13 00:01:37] 2025-10-13 03:25:06,081 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 00:01:37] 2025-10-13 03:25:06,081 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 00:01:37] 2025-10-13 03:25:06,081 | INFO     | update_server=False
[2025-10-13 00:01:37] 2025-10-13 03:25:06,081 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 00:01:37] 2025-10-13 03:25:06,104 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 00:01:37] 2025-10-13 03:25:06,104 | INFO     | aborting loop
[2025-10-13 00:01:37] 2025-10-13 03:25:06,912 | INFO     | all payload control threads have been joined
[2025-10-13 00:01:37] 2025-10-13 03:25:07,052 | INFO     | all data control threads have been joined
[2025-10-13 00:01:37] 2025-10-13 03:25:07,088 | INFO     | [job] retrieve thread has finished
[2025-10-13 00:01:37] 2025-10-13 03:25:07,110 | INFO     | [job] job monitor thread has finished
[2025-10-13 00:01:37] 2025-10-13 03:25:07,403 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 00:01:37] 2025-10-13 03:25:07,448 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 00:01:37] 2025-10-13 03:25:07,448 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 00:01:37] 2025-10-13 03:25:07,459 | INFO     | [job] validate thread has finished
[2025-10-13 00:01:37] 2025-10-13 03:25:07,623 | INFO     | all job control threads have been joined
[2025-10-13 00:01:37] 2025-10-13 03:25:07,695 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 00:01:37] 2025-10-13 03:25:07,923 | INFO     | [payload] failed_post thread has finished
[2025-10-13 00:01:37] 2025-10-13 03:25:07,943 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 00:01:37] 2025-10-13 03:25:07,957 | INFO     | [payload] control thread has finished
[2025-10-13 00:01:37] 2025-10-13 03:25:08,062 | INFO     | [data] control thread has finished
[2025-10-13 00:01:37] 2025-10-13 03:25:08,209 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 00:01:37] 2025-10-13 03:25:08,368 | INFO     | [payload] validate_post thread has finished
[2025-10-13 00:01:37] 2025-10-13 03:25:08,409 | INFO     | [data] copytool_in thread has finished
[2025-10-13 00:01:37] 2025-10-13 03:25:08,629 | INFO     | [job] control thread has finished
[2025-10-13 00:01:37] 2025-10-13 03:25:08,949 | INFO     | [job] queue monitor thread has finished
[2025-10-13 00:01:37] 2025-10-13 03:25:09,370 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 00:01:37] 2025-10-13 03:25:09,410 | INFO     | [data] copytool_out thread has finished
[2025-10-13 00:01:37] 2025-10-13 03:25:13,041 | INFO     | [monitor] cgroup control has ended
[2025-10-13 00:01:37] 2025-10-13 03:25:13,379 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 00:01:37] 2025-10-13 03:25:15,428 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139705753372480)>', '<ExcThread(monitor, started 139705404348160)>']
[2025-10-13 00:01:37] 2025-10-13 03:25:20,454 | INFO     | all workflow threads have been joined
[2025-10-13 00:01:37] 2025-10-13 03:25:20,454 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 00:01:37] 2025-10-13 03:25:20,454 | INFO     | traces error code: 0
[2025-10-13 00:01:37] 2025-10-13 03:25:20,455 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 00:01:37] 2025-10-13 03:25:39,082 | INFO     | PID=2233906 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 00:01:37] 2025-10-13 03:25:39,082 | INFO     | .. there are 9 such processes running
[2025-10-13 00:01:37] 2025-10-13 03:25:39,112 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 00:01:37] 2025-10-13 03:25:39,112 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 00:01:37] 2025-10-13 03:25:39,112 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 00:01:37] 2025-10-13 03:25:39,112 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 00:01:37] 2025-10-13 03:25:39,113 | INFO     | [monitor] control thread has ended
[2025-10-13 00:01:37] 2025-10-13 03:25:40,922 [wrapper] ==== pilot stdout END ====
[2025-10-13 00:01:37] 2025-10-13 03:25:41,026 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 00:01:37] 2025-10-13 03:25:41,041 [wrapper] pilotpid: 2233906
[2025-10-13 00:01:37] 2025-10-13 03:25:41,073 [wrapper] Pilot exit status: 0
[2025-10-13 00:01:37] 2025-10-13 03:25:41,188 [wrapper] pandaids: 6839865884
[2025-10-13 00:01:37] 2025-10-13 03:25:41,698 [wrapper] cleanup supervisor_pilot 2613352 2233907
[2025-10-13 00:01:37] 2025-10-13 03:25:41,714 [wrapper] Test setup, not cleaning
[2025-10-13 00:01:37] 2025-10-13 03:25:41,757 [wrapper] apfmon messages muted
[2025-10-13 00:01:37] 2025-10-13 03:25:41,772 [wrapper] ==== wrapper stdout END ====
[2025-10-13 00:01:37] 2025-10-13 03:25:41,783 [wrapper] ==== wrapper stderr END ====
[2025-10-13 00:01:37]  *** Error codes and diagnostics ***
[2025-10-13 00:01:37]     "exeErrorCode": 0,
[2025-10-13 00:01:37]     "exeErrorDiag": "",
[2025-10-13 00:01:37]     "pilotErrorCode": 0,
[2025-10-13 00:01:37]     "pilotErrorDiag": "",
[2025-10-13 00:01:37]  *** Listing of results directory ***
[2025-10-13 00:01:37] total 411872
[2025-10-13 00:01:37] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 05:51 pilot3.tar.gz
[2025-10-13 00:01:37] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 06:00 queuedata.json
[2025-10-13 00:01:37] -rwx------. 1 boincer umatlas     36292 Oct 12 06:00 runpilot2-wrapper.sh
[2025-10-13 00:01:37] -rw-r--r--. 1 boincer umatlas       100 Oct 12 18:27 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 00:01:37] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 18:27 run_atlas
[2025-10-13 00:01:37] -rw-r--r--. 1 boincer umatlas       105 Oct 12 18:27 job.xml
[2025-10-13 00:01:37] -rw-r--r--. 2 boincer umatlas 219227644 Oct 12 18:27 EVNT.46676267._003599.pool.root.1
[2025-10-13 00:01:37] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 18:27 start_atlas.sh
[2025-10-13 00:01:37] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 18:27 shared
[2025-10-13 00:01:37] -rw-r--r--. 2 boincer umatlas    569685 Oct 12 18:27 input.tar.gz
[2025-10-13 00:01:37] -rw-r--r--. 1 boincer umatlas         0 Oct 12 18:27 boinc_lockfile
[2025-10-13 00:01:37] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 18:27 pandaJob.out
[2025-10-13 00:01:37] -rw-------. 1 boincer umatlas    975603 Oct 12 18:28 agis_schedconf.cvmfs.json
[2025-10-13 00:01:37] drwx------. 5 boincer umatlas      4096 Oct 12 18:28 pilot3
[2025-10-13 00:01:37] -rw-------. 1 boincer umatlas 194177876 Oct 12 23:23 HITS.46676269._075619.pool.root.1
[2025-10-13 00:01:37] -rw-r--r--. 1 boincer umatlas       530 Oct 12 23:23 boinc_task_state.xml
[2025-10-13 00:01:37] -rw-------. 1 boincer umatlas      1046 Oct 12 23:24 memory_monitor_summary.json
[2025-10-13 00:01:37] -rw-------. 1 boincer umatlas   1560580 Oct 12 23:24 agis_ddmendpoints.agis.ALL.json
[2025-10-13 00:01:37] -rw-------. 1 boincer umatlas    447314 Oct 12 23:24 log.46676269._075619.job.log.tgz.1
[2025-10-13 00:01:37] -rw-------. 1 boincer umatlas      7834 Oct 12 23:25 heartbeat.json
[2025-10-13 00:01:37] -rw-------. 1 boincer umatlas        95 Oct 12 23:25 pilot_heartbeat.json
[2025-10-13 00:01:37] -rw-------. 1 boincer umatlas       822 Oct 12 23:25 pilotlog.txt
[2025-10-13 00:01:37] -rw-------. 1 boincer umatlas   1778273 Oct 12 23:25 log.46676269._075619.job.log.1
[2025-10-13 00:01:37] -rw-------. 1 boincer umatlas       357 Oct 12 23:25 output.list
[2025-10-13 00:01:37] -rw-r--r--. 1 boincer umatlas       620 Oct 12 23:25 runtime_log
[2025-10-13 00:01:37] -rw-------. 1 boincer umatlas   2242560 Oct 12 23:25 result.tar.gz
[2025-10-13 00:01:37] -rw-r--r--. 1 boincer umatlas      8704 Oct 12 23:25 runtime_log.err
[2025-10-13 00:01:37] -rw-------. 1 boincer umatlas       656 Oct 12 23:25 0GMKDmk37R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmuOjNDmdee2Xm.diag
[2025-10-13 00:01:37] -rw-r--r--. 1 boincer umatlas      6613 Oct 13 00:01 init_data.xml
[2025-10-13 00:01:37] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 00:01 boinc_mmap_file
[2025-10-13 00:01:37] -rw-r--r--. 1 boincer umatlas        27 Oct 13 00:01 wrapper_checkpoint.txt
[2025-10-13 00:01:37] -rw-r--r--. 1 boincer umatlas     21345 Oct 13 00:01 stderr.txt
[2025-10-13 00:01:37] HITS file was successfully produced:
[2025-10-13 00:01:37] -rw-------. 1 boincer umatlas 194177876 Oct 12 23:23 shared/HITS.pool.root.1
[2025-10-13 00:01:37]  *** Contents of shared directory: ***
[2025-10-13 00:01:37] total 406492
[2025-10-13 00:01:37] -rw-r--r--. 2 boincer umatlas 219227644 Oct 12 18:27 ATLAS.root_0
[2025-10-13 00:01:37] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 18:27 start_atlas.sh
[2025-10-13 00:01:37] -rw-r--r--. 2 boincer umatlas    569685 Oct 12 18:27 input.tar.gz
[2025-10-13 00:01:37] -rw-------. 1 boincer umatlas 194177876 Oct 12 23:23 HITS.pool.root.1
[2025-10-13 00:01:37] -rw-------. 1 boincer umatlas   2242560 Oct 12 23:25 result.tar.gz
00:01:39 (2229974): run_atlas exited; CPU time 62159.975407
00:01:39 (2229974): called boinc_finish(0)

</stderr_txt>
]]>

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