Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
09:50:19 (6886): wrapper (7.7.26015): starting
09:50:19 (6886): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 09:50:19] Arguments: --nthreads 8
[2025-10-12 09:50:19] Threads: 8
[2025-10-12 09:50:19] Checking for CVMFS
[2025-10-12 09:50:20] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 09:50:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 09:50:20] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 09:50:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 09:50:20] 2.11.2.0 2861 205929 121536 151621 3 57 12322090 20275200 1 130560 2 75891570 99.975 11146435 10059 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 09:50:20] CVMFS is ok
[2025-10-12 09:50:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 09:50:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 09:50:20] Further information can be found at the LHC@home message board.
[2025-10-12 09:50:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 09:50:20] Checking for apptainer binary...
[2025-10-12 09:50:20] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 09:50:20] Running /usr/bin/apptainer --version
[2025-10-12 09:50:20] apptainer version 1.3.2-1.el7
[2025-10-12 09:50:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 09:50:22] c-204-18.aglt2.org
[2025-10-12 09:50:22] apptainer works
[2025-10-12 09:50:22] Set ATHENA_PROC_NUMBER=8
[2025-10-12 09:50:22] Set ATHENA_CORE_NUMBER=8
[2025-10-12 09:50:22] Starting ATLAS job with PandaID=6839659108
[2025-10-12 09:50:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 11:57:58]  *** The last 200 lines of the pilot log: ***
[2025-10-12 11:57:58] 2025-10-12 15:56:57,053 | INFO     | intersect: -42494095099.20378
[2025-10-12 11:57:58] 2025-10-12 15:56:57,054 | INFO     | chi2: 1.565268323099157
[2025-10-12 11:57:58] 2025-10-12 15:56:57,054 | INFO     | current chi2=1.565268323099157 (change=-0.1813026999796501 %)
[2025-10-12 11:57:58] 2025-10-12 15:56:57,054 | INFO     | right removable region: 118
[2025-10-12 11:57:58] 2025-10-12 15:56:57,054 | INFO     | sum of square deviations: 522502820.0
[2025-10-12 11:57:58] 2025-10-12 15:56:57,055 | INFO     | sum of deviations: -5621367282.0
[2025-10-12 11:57:58] 2025-10-12 15:56:57,055 | INFO     | mean x: 1760280975.0
[2025-10-12 11:57:58] 2025-10-12 15:56:57,055 | INFO     | mean y: 2517247.6134453784
[2025-10-12 11:57:58] 2025-10-12 15:56:57,055 | INFO     | -- intersect: 18940569830.740288
[2025-10-12 11:57:58] 2025-10-12 15:56:57,055 | INFO     | intersect: 18940569830.740288
[2025-10-12 11:57:58] 2025-10-12 15:56:57,055 | INFO     | chi2: 0.07522418137061038
[2025-10-12 11:57:58] 2025-10-12 15:56:57,056 | INFO     | current chi2=0.07522418137061038 (change=95.185453910339 %)
[2025-10-12 11:57:58] 2025-10-12 15:56:57,056 | INFO     | sum of square deviations: 459366752.5
[2025-10-12 11:57:58] 2025-10-12 15:56:57,056 | INFO     | sum of deviations: -2983744362.000001
[2025-10-12 11:57:58] 2025-10-12 15:56:57,056 | INFO     | mean x: 1760281127.5
[2025-10-12 11:57:58] 2025-10-12 15:56:57,057 | INFO     | mean y: 2510765.649122807
[2025-10-12 11:57:58] 2025-10-12 15:56:57,057 | INFO     | -- intersect: 11436139475.452473
[2025-10-12 11:57:58] 2025-10-12 15:56:57,057 | INFO     | intersect: 11436139475.452473
[2025-10-12 11:57:58] 2025-10-12 15:56:57,057 | INFO     | chi2: 0.05247018784231509
[2025-10-12 11:57:58] 2025-10-12 15:56:57,057 | INFO     | current chi2=0.05247018784231509 (change=30.248243468668885 %)
[2025-10-12 11:57:58] 2025-10-12 15:56:57,057 | INFO     | sum of square deviations: 401533110.0
[2025-10-12 11:57:58] 2025-10-12 15:56:57,058 | INFO     | sum of deviations: 1505446938.0000005
[2025-10-12 11:57:58] 2025-10-12 15:56:57,058 | INFO     | mean x: 1760281280.0
[2025-10-12 11:57:58] 2025-10-12 15:56:57,058 | INFO     | mean y: 2498914.9541284405
[2025-10-12 11:57:58] 2025-10-12 15:56:57,058 | INFO     | -- intersect: -6597230962.850273
[2025-10-12 11:57:58] 2025-10-12 15:56:57,058 | INFO     | intersect: -6597230962.850273
[2025-10-12 11:57:58] 2025-10-12 15:56:57,059 | INFO     | chi2: 9.096919706405656e-05
[2025-10-12 11:57:58] 2025-10-12 15:56:57,059 | INFO     | current chi2=9.096919706405656e-05 (change=99.82662688889653 %)
[2025-10-12 11:57:58] 2025-10-12 15:56:57,059 | INFO     | sum of square deviations: 348769330.0
[2025-10-12 11:57:58] 2025-10-12 15:56:57,060 | INFO     | sum of deviations: 1200334454.0
[2025-10-12 11:57:58] 2025-10-12 15:56:57,060 | INFO     | mean x: 1760281432.5
[2025-10-12 11:57:58] 2025-10-12 15:56:57,060 | INFO     | mean y: 2499794.3846153845
[2025-10-12 11:57:58] 2025-10-12 15:56:57,060 | INFO     | -- intersect: -6055734890.890679
[2025-10-12 11:57:58] 2025-10-12 15:56:57,060 | INFO     | intersect: -6055734890.890679
[2025-10-12 11:57:58] 2025-10-12 15:56:57,060 | INFO     | chi2: 4.679148071589996e-05
[2025-10-12 11:57:58] 2025-10-12 15:56:57,060 | INFO     | current chi2=4.679148071589996e-05 (change=48.56337944485601 %)
[2025-10-12 11:57:58] 2025-10-12 15:56:57,061 | INFO     | sum of square deviations: 300842850.0
[2025-10-12 11:57:58] 2025-10-12 15:56:57,061 | INFO     | sum of deviations: 1025868110.0
[2025-10-12 11:57:58] 2025-10-12 15:56:57,061 | INFO     | mean x: 1760281585.0
[2025-10-12 11:57:58] 2025-10-12 15:56:57,061 | INFO     | mean y: 2500349.5555555555
[2025-10-12 11:57:58] 2025-10-12 15:56:57,061 | INFO     | -- intersect: -6000024698.560943
[2025-10-12 11:57:58] 2025-10-12 15:56:57,062 | INFO     | intersect: -6000024698.560943
[2025-10-12 11:57:58] 2025-10-12 15:56:57,062 | INFO     | chi2: 4.580398935891788e-05
[2025-10-12 11:57:58] 2025-10-12 15:56:57,062 | INFO     | current chi2=4.580398935891788e-05 (change=2.110408437334465 %)
[2025-10-12 11:57:58] 2025-10-12 15:56:57,062 | INFO     | left removable region: 50
[2025-10-12 11:57:58] 2025-10-12 15:56:57,062 | INFO     | sum of square deviations: 97479037.0
[2025-10-12 11:57:58] 2025-10-12 15:56:57,063 | INFO     | sum of deviations: 323507400.0
[2025-10-12 11:57:58] 2025-10-12 15:56:57,063 | INFO     | mean x: 1760282164.5
[2025-10-12 11:57:58] 2025-10-12 15:56:57,063 | INFO     | mean y: 2502704.7647058824
[2025-10-12 11:57:58] 2025-10-12 15:56:57,063 | INFO     | -- intersect: -5839412888.87998
[2025-10-12 11:57:58] 2025-10-12 15:56:57,063 | INFO     | intersect: -5839412888.87998
[2025-10-12 11:57:58] 2025-10-12 15:56:57,063 | INFO     | chi2: 3.4082359376575194e-05
[2025-10-12 11:57:58] 2025-10-12 15:56:57,064 | INFO     | -- intersect: -5839412888.87998
[2025-10-12 11:57:58] 2025-10-12 15:56:57,064 | INFO     | current memory leak: 3.32 B/s (using 68 data points, chi2=0.00)
[2025-10-12 11:57:58] 2025-10-12 15:56:57,064 | INFO     | could have reported an average CPU frequency of 1960 MHz (8 samples)
[2025-10-12 11:57:58] 2025-10-12 15:56:57,064 | INFO     | ..............................
[2025-10-12 11:57:58] 2025-10-12 15:56:57,064 | INFO     | . Timing measurements:
[2025-10-12 11:57:58] 2025-10-12 15:56:57,065 | INFO     | . get job = 0 s
[2025-10-12 11:57:58] 2025-10-12 15:56:57,065 | INFO     | . initial setup = 2 s
[2025-10-12 11:57:58] 2025-10-12 15:56:57,065 | INFO     | . payload setup = 8 s
[2025-10-12 11:57:58] 2025-10-12 15:56:57,065 | INFO     | . stage-in = 0 s
[2025-10-12 11:57:58] 2025-10-12 15:56:57,065 | INFO     | . payload execution = 7540 s
[2025-10-12 11:57:58] 2025-10-12 15:56:57,065 | INFO     | . stage-out = 0 s
[2025-10-12 11:57:58] 2025-10-12 15:56:57,065 | INFO     | . log creation = 0 s
[2025-10-12 11:57:58] 2025-10-12 15:56:57,065 | INFO     | ..............................
[2025-10-12 11:57:58] 2025-10-12 15:56:57,523 | INFO     | 
[2025-10-12 11:57:58] 2025-10-12 15:56:57,524 | INFO     | job summary report
[2025-10-12 11:57:58] 2025-10-12 15:56:57,524 | INFO     | --------------------------------------------------
[2025-10-12 11:57:58] 2025-10-12 15:56:57,524 | INFO     | PanDA job id: 6839659108
[2025-10-12 11:57:58] 2025-10-12 15:56:57,524 | INFO     | task id: 46676269
[2025-10-12 11:57:58] 2025-10-12 15:56:57,524 | INFO     | errors: (none)
[2025-10-12 11:57:58] 2025-10-12 15:56:57,524 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 11:57:58] 2025-10-12 15:56:57,525 | INFO     | pilot state: finished 
[2025-10-12 11:57:58] 2025-10-12 15:56:57,525 | INFO     | transexitcode: 0
[2025-10-12 11:57:58] 2025-10-12 15:56:57,525 | INFO     | exeerrorcode: 0
[2025-10-12 11:57:58] 2025-10-12 15:56:57,525 | INFO     | exeerrordiag: 
[2025-10-12 11:57:58] 2025-10-12 15:56:57,525 | INFO     | exitcode: 0
[2025-10-12 11:57:58] 2025-10-12 15:56:57,526 | INFO     | exitmsg: OK
[2025-10-12 11:57:58] 2025-10-12 15:56:57,526 | INFO     | cpuconsumptiontime: 55883 s
[2025-10-12 11:57:58] 2025-10-12 15:56:57,526 | INFO     | nevents: 400
[2025-10-12 11:57:58] 2025-10-12 15:56:57,526 | INFO     | neventsw: 0
[2025-10-12 11:57:58] 2025-10-12 15:56:57,526 | INFO     | pid: 17047
[2025-10-12 11:57:58] 2025-10-12 15:56:57,526 | INFO     | pgrp: 17047
[2025-10-12 11:57:58] 2025-10-12 15:56:57,527 | INFO     | corecount: 8
[2025-10-12 11:57:58] 2025-10-12 15:56:57,527 | INFO     | event service: False
[2025-10-12 11:57:58] 2025-10-12 15:56:57,527 | INFO     | sizes: {0: 2348680, 1: 2348879, 6: 2349141, 11: 2349169, 7552: 2376712, 7553: 2385710, 7554: 2385894, 7560: 2386088}
[2025-10-12 11:57:58] 2025-10-12 15:56:57,527 | INFO     | --------------------------------------------------
[2025-10-12 11:57:58] 2025-10-12 15:56:57,527 | INFO     | 
[2025-10-12 11:57:58] 2025-10-12 15:56:57,527 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 11:57:58] 2025-10-12 15:56:57,555 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 11:57:58] 2025-10-12 15:56:57,556 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 11:57:58] 2025-10-12 15:56:57,556 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 11:57:58] 2025-10-12 15:56:57,556 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 11:57:58] 2025-10-12 15:56:57,556 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 11:57:58] 2025-10-12 15:56:57,556 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 11:57:58] 2025-10-12 15:56:57,557 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 11:57:58] 2025-10-12 15:56:57,557 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 11:57:58] 2025-10-12 15:56:57,557 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 11:57:58] 2025-10-12 15:56:57,557 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 11:57:58] 2025-10-12 15:56:57,557 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 11:57:58] 2025-10-12 15:56:57,558 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 11:57:58] 2025-10-12 15:56:57,558 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 11:57:58] 2025-10-12 15:56:57,558 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 11:57:58] 2025-10-12 15:56:57,558 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 11:57:58] 2025-10-12 15:56:57,558 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 11:57:58] 2025-10-12 15:56:57,558 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 11:57:58] 2025-10-12 15:56:57,559 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 11:57:58] 2025-10-12 15:56:57,559 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 11:57:58] 2025-10-12 15:56:57,559 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 11:57:58] 2025-10-12 15:56:57,559 | INFO     | job 6839659108 has completed (purged errors)
[2025-10-12 11:57:58] 2025-10-12 15:56:57,560 | INFO     | overall cleanup function is called
[2025-10-12 11:57:58] 2025-10-12 15:56:58,568 | INFO     | --- collectZombieJob: --- 10, [17047]
[2025-10-12 11:57:58] 2025-10-12 15:56:58,568 | INFO     | zombie collector waiting for pid 17047
[2025-10-12 11:57:58] 2025-10-12 15:56:58,568 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 11:57:58] 2025-10-12 15:56:58,568 | INFO     | collected zombie processes
[2025-10-12 11:57:58] 2025-10-12 15:56:58,569 | INFO     | will attempt to kill all subprocesses of pid=17047
[2025-10-12 11:57:58] 2025-10-12 15:56:58,656 | INFO     | process IDs to be killed: [17047] (in reverse order)
[2025-10-12 11:57:58] 2025-10-12 15:56:58,719 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 11:57:58] 2025-10-12 15:56:58,720 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 11:57:58] 2025-10-12 15:56:58,725 | INFO     | did not find any defunct processes belonging to 17047
[2025-10-12 11:57:58] 2025-10-12 15:56:58,728 | INFO     | did not find any defunct processes belonging to 17047
[2025-10-12 11:57:58] 2025-10-12 15:56:58,729 | INFO     | ready for new job
[2025-10-12 11:57:58] 2025-10-12 15:56:58,729 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 11:57:58] 2025-10-12 15:56:58,731 | INFO     | ***************************************
[2025-10-12 11:57:58] 2025-10-12 15:56:58,731 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 11:57:58] 2025-10-12 15:56:58,731 | INFO     | ***************************************
[2025-10-12 11:57:58] 2025-10-12 15:56:58,732 | INFO     | 
[2025-10-12 11:57:58] 2025-10-12 15:56:58,732 | INFO     | architecture information:
[2025-10-12 11:57:58] 2025-10-12 15:56:58,733 | INFO     | executing command: cat /etc/os-release
[2025-10-12 11:57:58] 2025-10-12 15:56:58,755 | INFO     | cat /etc/os-release:
[2025-10-12 11:57:58] NAME="CentOS Linux"
[2025-10-12 11:57:58] VERSION="7 (Core)"
[2025-10-12 11:57:58] ID="centos"
[2025-10-12 11:57:58] ID_LIKE="rhel fedora"
[2025-10-12 11:57:58] VERSION_ID="7"
[2025-10-12 11:57:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 11:57:58] ANSI_COLOR="0;31"
[2025-10-12 11:57:58] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 11:57:58] HOME_URL="https://www.centos.org/"
[2025-10-12 11:57:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 11:57:58] 
[2025-10-12 11:57:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 11:57:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 11:57:58] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 11:57:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 11:57:58] 
[2025-10-12 11:57:58] 2025-10-12 15:56:58,755 | INFO     | ***************************************
[2025-10-12 11:57:58] 2025-10-12 15:56:59,259 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 11:57:58] 2025-10-12 15:56:59,280 | INFO     | sufficient remaining disk space (18558746624 B)
[2025-10-12 11:57:58] 2025-10-12 15:56:59,281 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 11:57:58] 2025-10-12 15:56:59,281 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 11:57:58] 2025-10-12 15:56:59,281 | INFO     | update_server=False
[2025-10-12 11:57:58] 2025-10-12 15:56:59,281 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 11:57:58] 2025-10-12 15:56:59,282 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 11:57:58] 2025-10-12 15:56:59,577 | INFO     | all payload control threads have been joined
[2025-10-12 11:57:58] 2025-10-12 15:56:59,644 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 11:57:58] 2025-10-12 15:56:59,644 | INFO     | aborting loop
[2025-10-12 11:57:58] 2025-10-12 15:57:00,041 | INFO     | all data control threads have been joined
[2025-10-12 11:57:58] 2025-10-12 15:57:00,287 | INFO     | [job] retrieve thread has finished
[2025-10-12 11:57:58] 2025-10-12 15:57:00,394 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 11:57:58] 2025-10-12 15:57:00,451 | INFO     | [payload] failed_post thread has finished
[2025-10-12 11:57:58] 2025-10-12 15:57:00,578 | INFO     | [payload] control thread has finished
[2025-10-12 11:57:58] 2025-10-12 15:57:00,645 | INFO     | [job] job monitor thread has finished
[2025-10-12 11:57:58] 2025-10-12 15:57:00,671 | INFO     | all job control threads have been joined
[2025-10-12 11:57:58] 2025-10-12 15:57:00,920 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 11:57:58] 2025-10-12 15:57:00,938 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 11:57:58] 2025-10-12 15:57:01,047 | INFO     | [data] control thread has finished
[2025-10-12 11:57:58] 2025-10-12 15:57:01,288 | INFO     | [data] copytool_out thread has finished
[2025-10-12 11:57:58] 2025-10-12 15:57:01,310 | INFO     | [payload] validate_post thread has finished
[2025-10-12 11:57:58] 2025-10-12 15:57:01,665 | INFO     | [job] validate thread has finished
[2025-10-12 11:57:58] 2025-10-12 15:57:01,673 | INFO     | [data] copytool_in thread has finished
[2025-10-12 11:57:58] 2025-10-12 15:57:01,673 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 11:57:58] 2025-10-12 15:57:01,677 | INFO     | [job] control thread has finished
[2025-10-12 11:57:58] 2025-10-12 15:57:02,177 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 11:57:58] 2025-10-12 15:57:03,182 | INFO     | [job] queue monitor thread has finished
[2025-10-12 11:57:58] 2025-10-12 15:57:04,945 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 11:57:58] 2025-10-12 15:57:09,365 | INFO     | job.realtimelogging is not enabled
[2025-10-12 11:57:58] 2025-10-12 15:57:10,370 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 11:57:58] 2025-10-12 15:57:29,464 | INFO     | PID=10633 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 11:57:58] 2025-10-12 15:57:29,465 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 11:57:58] 2025-10-12 15:57:29,465 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 11:57:58] 2025-10-12 15:57:29,466 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 11:57:58] 2025-10-12 15:57:51,580 | INFO     | [monitor] cgroup control has ended
[2025-10-12 11:57:58] 2025-10-12 15:57:53,423 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140458613831488)>', '<ExcThread(monitor, started 140457501779712)>']
[2025-10-12 11:57:58] 2025-10-12 15:57:53,587 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 11:57:58] 2025-10-12 15:57:53,587 | INFO     | [monitor] control thread has ended
[2025-10-12 11:57:58] 2025-10-12 15:57:58,449 | INFO     | all workflow threads have been joined
[2025-10-12 11:57:58] 2025-10-12 15:57:58,449 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 11:57:58] 2025-10-12 15:57:58,450 | INFO     | traces error code: 0
[2025-10-12 11:57:58] 2025-10-12 15:57:58,450 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 11:57:58] 2025-10-12 15:57:58,566 [wrapper] ==== pilot stdout END ====
[2025-10-12 11:57:58] 2025-10-12 15:57:58,571 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 11:57:58] 2025-10-12 15:57:58,575 [wrapper] pilotpid: 10633
[2025-10-12 11:57:58] 2025-10-12 15:57:58,581 [wrapper] Pilot exit status: 0
[2025-10-12 11:57:58] 2025-10-12 15:57:58,600 [wrapper] pandaids: 6839659108
[2025-10-12 11:57:58] 2025-10-12 15:57:58,648 [wrapper] cleanup supervisor_pilot  5247 10634
[2025-10-12 11:57:58] 2025-10-12 15:57:58,653 [wrapper] Test setup, not cleaning
[2025-10-12 11:57:58] 2025-10-12 15:57:58,658 [wrapper] apfmon messages muted
[2025-10-12 11:57:58] 2025-10-12 15:57:58,664 [wrapper] ==== wrapper stdout END ====
[2025-10-12 11:57:58] 2025-10-12 15:57:58,671 [wrapper] ==== wrapper stderr END ====
[2025-10-12 11:57:58]  *** Error codes and diagnostics ***
[2025-10-12 11:57:58]     "exeErrorCode": 0,
[2025-10-12 11:57:58]     "exeErrorDiag": "",
[2025-10-12 11:57:58]     "pilotErrorCode": 0,
[2025-10-12 11:57:58]     "pilotErrorDiag": "",
[2025-10-12 11:57:58]  *** Listing of results directory ***
[2025-10-12 11:57:58] total 407884
[2025-10-12 11:57:58] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 02:54 pilot3.tar.gz
[2025-10-12 11:57:58] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 03:32 queuedata.json
[2025-10-12 11:57:58] -rwx------ 1 boincer umatlas     36292 Oct 12 03:32 runpilot2-wrapper.sh
[2025-10-12 11:57:58] -rw-r--r-- 1 boincer umatlas       100 Oct 12 09:50 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 11:57:58] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 09:50 run_atlas
[2025-10-12 11:57:58] -rw-r--r-- 1 boincer umatlas       105 Oct 12 09:50 job.xml
[2025-10-12 11:57:58] -rw-r--r-- 2 boincer umatlas 219151103 Oct 12 09:50 EVNT.46676267._003504.pool.root.1
[2025-10-12 11:57:58] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 09:50 start_atlas.sh
[2025-10-12 11:57:58] drwxrwx--x 2 boincer umatlas      4096 Oct 12 09:50 shared
[2025-10-12 11:57:58] -rw-r--r-- 2 boincer umatlas    569677 Oct 12 09:50 input.tar.gz
[2025-10-12 11:57:58] -rw-r--r-- 1 boincer umatlas         0 Oct 12 09:50 boinc_lockfile
[2025-10-12 11:57:58] -rw-r--r-- 1 boincer umatlas      2547 Oct 12 09:50 pandaJob.out
[2025-10-12 11:57:58] -rw------- 1 boincer umatlas    975528 Oct 12 09:50 agis_schedconf.cvmfs.json
[2025-10-12 11:57:58] -rw------- 1 boincer umatlas   1560580 Oct 12 09:50 agis_ddmendpoints.agis.ALL.json
[2025-10-12 11:57:58] drwx------ 5 boincer umatlas      4096 Oct 12 09:50 pilot3
[2025-10-12 11:57:58] -rw-r--r-- 1 boincer umatlas      5909 Oct 12 11:54 init_data.xml
[2025-10-12 11:57:58] -rw------- 1 boincer umatlas 191770076 Oct 12 11:56 HITS.46676269._073589.pool.root.1
[2025-10-12 11:57:58] -rw-r--r-- 1 boincer umatlas       529 Oct 12 11:56 boinc_task_state.xml
[2025-10-12 11:57:58] -rw------- 1 boincer umatlas      1051 Oct 12 11:56 memory_monitor_summary.json
[2025-10-12 11:57:58] -rw------- 1 boincer umatlas    354719 Oct 12 11:56 log.46676269._073589.job.log.tgz.1
[2025-10-12 11:57:58] -rw------- 1 boincer umatlas      7843 Oct 12 11:56 heartbeat.json
[2025-10-12 11:57:58] -rw------- 1 boincer umatlas        95 Oct 12 11:57 pilot_heartbeat.json
[2025-10-12 11:57:58] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 11:57 boinc_mmap_file
[2025-10-12 11:57:58] -rw-r--r-- 1 boincer umatlas        27 Oct 12 11:57 wrapper_checkpoint.txt
[2025-10-12 11:57:58] -rw------- 1 boincer umatlas      4818 Oct 12 11:57 pilotlog.txt
[2025-10-12 11:57:58] -rw------- 1 boincer umatlas   1070168 Oct 12 11:57 log.46676269._073589.job.log.1
[2025-10-12 11:57:58] -rw------- 1 boincer umatlas       357 Oct 12 11:57 output.list
[2025-10-12 11:57:58] -rw-r--r-- 1 boincer umatlas       620 Oct 12 11:57 runtime_log
[2025-10-12 11:57:58] -rw------- 1 boincer umatlas   1443840 Oct 12 11:57 result.tar.gz
[2025-10-12 11:57:58] -rw-r--r-- 1 boincer umatlas      8703 Oct 12 11:57 runtime_log.err
[2025-10-12 11:57:58] -rw------- 1 boincer umatlas       659 Oct 12 11:57 LJtMDmmk5R8n9Rq4apOajLDm4fhM0noT9bVof3QYDm1RTMDmJ3LD0m.diag
[2025-10-12 11:57:58] -rw-r--r-- 1 boincer umatlas     20892 Oct 12 11:57 stderr.txt
[2025-10-12 11:57:58] HITS file was successfully produced:
[2025-10-12 11:57:58] -rw------- 1 boincer umatlas 191770076 Oct 12 11:56 shared/HITS.pool.root.1
[2025-10-12 11:57:58]  *** Contents of shared directory: ***
[2025-10-12 11:57:58] total 403284
[2025-10-12 11:57:58] -rw-r--r-- 2 boincer umatlas 219151103 Oct 12 09:50 ATLAS.root_0
[2025-10-12 11:57:58] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 09:50 start_atlas.sh
[2025-10-12 11:57:58] -rw-r--r-- 2 boincer umatlas    569677 Oct 12 09:50 input.tar.gz
[2025-10-12 11:57:58] -rw------- 1 boincer umatlas 191770076 Oct 12 11:56 HITS.pool.root.1
[2025-10-12 11:57:58] -rw------- 1 boincer umatlas   1443840 Oct 12 11:57 result.tar.gz
11:58:00 (6886): run_atlas exited; CPU time 55818.557957
11:58:00 (6886): called boinc_finish(0)

</stderr_txt>
]]>

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