Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
02:15:19 (3045574): wrapper (7.7.26015): starting
02:15:19 (3045574): wrapper: running run_atlas (--nthreads 3)
[2025-10-13 02:15:19] Arguments: --nthreads 3
[2025-10-13 02:15:19] Threads: 3
[2025-10-13 02:15:19] Checking for CVMFS
[2025-10-13 02:15:19] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 02:15:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 02:15:19] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 02:15:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 02:15:20] 2.9.2.0 233307 5054 66636 151641 3 57 2991017 36864001 0 130560 0 3690149 99.990 170448 822 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-13 02:15:20] CVMFS is ok
[2025-10-13 02:15:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 02:15:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 02:15:20] Further information can be found at the LHC@home message board.
[2025-10-13 02:15:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 02:15:20] Checking for apptainer binary...
[2025-10-13 02:15:20] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 02:15:20] Running /usr/bin/apptainer --version
[2025-10-13 02:15:20] apptainer version 1.4.1-1.1
[2025-10-13 02:15:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 02:15:20] atlasA221b
[2025-10-13 02:15:20] apptainer works
[2025-10-13 02:15:20] Set ATHENA_PROC_NUMBER=3
[2025-10-13 02:15:20] Set ATHENA_CORE_NUMBER=3
[2025-10-13 02:15:20] Starting ATLAS job with PandaID=6839866747
[2025-10-13 02:15:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 03:52:42]  *** The last 200 lines of the pilot log: ***
[2025-10-13 03:52:42] 2025-10-13 01:51:47,779 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 03:52:42] 2025-10-13 01:51:47,825 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 03:52:42] 2025-10-13 01:51:47,825 | INFO     | aborting loop
[2025-10-13 03:52:42] 2025-10-13 01:51:48,007 | INFO     | [job] retrieve thread has finished
[2025-10-13 03:52:42] 2025-10-13 01:51:48,008 | INFO     | [job] queue monitor thread has finished
[2025-10-13 03:52:42] 2025-10-13 01:51:48,171 | INFO     | [payload] failed_post thread has finished
[2025-10-13 03:52:42] 2025-10-13 01:51:48,276 | INFO     | all payload control threads have been joined
[2025-10-13 03:52:42] 2025-10-13 01:51:48,679 | INFO     | all job control threads have been joined
[2025-10-13 03:52:42] 2025-10-13 01:51:48,700 | INFO     | [payload] validate_post thread has finished
[2025-10-13 03:52:42] 2025-10-13 01:51:48,711 | INFO     | [data] control thread has finished
[2025-10-13 03:52:42] 2025-10-13 01:51:48,831 | INFO     | [job] job monitor thread has finished
[2025-10-13 03:52:42] 2025-10-13 01:51:49,054 | INFO     | [data] copytool_out thread has finished
[2025-10-13 03:52:42] 2025-10-13 01:51:49,249 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 03:52:42] 2025-10-13 01:51:49,256 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 03:52:42] 2025-10-13 01:51:49,260 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 03:52:42] 2025-10-13 01:51:49,264 | INFO     | [job] validate thread has finished
[2025-10-13 03:52:42] 2025-10-13 01:51:49,282 | INFO     | [payload] control thread has finished
[2025-10-13 03:52:42] 2025-10-13 01:51:49,347 | INFO     | [data] copytool_in thread has finished
[2025-10-13 03:52:42] 2025-10-13 01:51:49,685 | INFO     | [job] control thread has finished
[2025-10-13 03:52:42] 2025-10-13 01:51:51,785 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 03:52:42] 2025-10-13 01:51:57,534 | INFO     | job.realtimelogging is not enabled
[2025-10-13 03:52:42] 2025-10-13 01:51:58,540 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 03:52:42] 2025-10-13 01:52:17,248 | INFO     | PID=3049317 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 03:52:42] 2025-10-13 01:52:17,248 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 03:52:42] 2025-10-13 01:52:17,248 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 03:52:42] 2025-10-13 01:52:17,248 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 03:52:42] 2025-10-13 01:52:36,364 | INFO     | [monitor] cgroup control has ended
[2025-10-13 03:52:42] 2025-10-13 01:52:37,298 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140237105399616)>', '<ExcThread(monitor, started 140236604544768)>']
[2025-10-13 03:52:42] 2025-10-13 01:52:37,348 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 03:52:42] 2025-10-13 01:52:37,349 | INFO     | [monitor] control thread has ended
[2025-10-13 03:52:42] 2025-10-13 01:52:42,323 | INFO     | all workflow threads have been joined
[2025-10-13 03:52:42] 2025-10-13 01:52:42,324 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 03:52:42] 2025-10-13 01:52:42,324 | INFO     | traces error code: 0
[2025-10-13 03:52:42] 2025-10-13 01:52:42,325 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 03:52:42] 2025-10-13 01:52:42,407 [wrapper] ==== pilot stdout END ====
[2025-10-13 03:52:42] 2025-10-13 01:52:42,410 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 03:52:42] 2025-10-13 01:52:42,413 [wrapper] pilotpid: 3049317
[2025-10-13 03:52:42] 2025-10-13 01:52:42,415 [wrapper] Pilot exit status: 0
[2025-10-13 03:52:42] 2025-10-13 01:52:42,423 [wrapper] pandaids: 6839866747
[2025-10-13 03:52:42] 2025-10-13 01:52:42,446 [wrapper] cleanup supervisor_pilot 3093722 3049318
[2025-10-13 03:52:42] 2025-10-13 01:52:42,449 [wrapper] Test setup, not cleaning
[2025-10-13 03:52:42] 2025-10-13 01:52:42,451 [wrapper] apfmon messages muted
[2025-10-13 03:52:42] 2025-10-13 01:52:42,454 [wrapper] ==== wrapper stdout END ====
[2025-10-13 03:52:42] 2025-10-13 01:52:42,456 [wrapper] ==== wrapper stderr END ====
[2025-10-13 03:52:42]  *** Error codes and diagnostics ***
[2025-10-13 03:52:42]     "exeErrorCode": 0,
[2025-10-13 03:52:42]     "exeErrorDiag": "",
[2025-10-13 03:52:42]     "pilotErrorCode": 0,
[2025-10-13 03:52:42]     "pilotErrorDiag": "",
[2025-10-13 03:52:42]  *** Listing of results directory ***
[2025-10-13 03:52:42] total 410992
[2025-10-13 03:52:42] -rw-r--r-- 1 boinc boinc    557409 Oct 12 12:16 pilot3.tar.gz
[2025-10-13 03:52:42] -rwx------ 1 boinc boinc     36292 Oct 12 12:24 runpilot2-wrapper.sh
[2025-10-13 03:52:42] -rw-r--r-- 1 boinc boinc      5112 Oct 12 12:24 queuedata.json
[2025-10-13 03:52:42] -rw-r--r-- 1 boinc boinc       100 Oct 13 02:15 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 03:52:42] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 02:15 run_atlas
[2025-10-13 03:52:42] -rw-r--r-- 1 boinc boinc       105 Oct 13 02:15 job.xml
[2025-10-13 03:52:42] -rw-r--r-- 2 boinc boinc 219778360 Oct 13 02:15 EVNT.46676267._003622.pool.root.1
[2025-10-13 03:52:42] -rw-r--r-- 2 boinc boinc    569672 Oct 13 02:15 input.tar.gz
[2025-10-13 03:52:42] -rw-r--r-- 2 boinc boinc     15120 Oct 13 02:15 start_atlas.sh
[2025-10-13 03:52:42] drwxrwx--x 2 boinc boinc      4096 Oct 13 02:15 shared
[2025-10-13 03:52:42] -rw-r--r-- 1 boinc boinc         0 Oct 13 02:15 boinc_setup_complete
[2025-10-13 03:52:42] -rw-r--r-- 1 boinc boinc      6197 Oct 13 02:15 init_data.xml
[2025-10-13 03:52:42] -rw-r--r-- 1 boinc boinc         0 Oct 13 02:15 boinc_lockfile
[2025-10-13 03:52:42] -rw-r--r-- 1 boinc boinc      2549 Oct 13 02:15 pandaJob.out
[2025-10-13 03:52:42] -rw------- 1 boinc boinc    975603 Oct 13 02:15 agis_schedconf.cvmfs.json
[2025-10-13 03:52:42] -rw------- 1 boinc boinc   1560580 Oct 13 02:15 agis_ddmendpoints.agis.ALL.json
[2025-10-13 03:52:42] drwx------ 5 boinc boinc      4096 Oct 13 02:15 pilot3
[2025-10-13 03:52:42] -rw------- 1 boinc boinc 194995465 Oct 13 03:51 HITS.46676269._076066.pool.root.1
[2025-10-13 03:52:42] -rw-r--r-- 1 boinc boinc       529 Oct 13 03:51 boinc_task_state.xml
[2025-10-13 03:52:42] -rw------- 1 boinc boinc      1028 Oct 13 03:51 memory_monitor_summary.json
[2025-10-13 03:52:42] -rw------- 1 boinc boinc    255456 Oct 13 03:51 log.46676269._076066.job.log.tgz.1
[2025-10-13 03:52:42] -rw------- 1 boinc boinc      7772 Oct 13 03:51 heartbeat.json
[2025-10-13 03:52:42] -rw------- 1 boinc boinc        95 Oct 13 03:52 pilot_heartbeat.json
[2025-10-13 03:52:42] -rw-r--r-- 1 boinc boinc      8192 Oct 13 03:52 boinc_mmap_file
[2025-10-13 03:52:42] -rw-r--r-- 1 boinc boinc        27 Oct 13 03:52 wrapper_checkpoint.txt
[2025-10-13 03:52:42] -rw------- 1 boinc boinc      4824 Oct 13 03:52 pilotlog.txt
[2025-10-13 03:52:42] -rw------- 1 boinc boinc    839149 Oct 13 03:52 log.46676269._076066.job.log.1
[2025-10-13 03:52:42] -rw------- 1 boinc boinc       357 Oct 13 03:52 output.list
[2025-10-13 03:52:42] -rw-r--r-- 1 boinc boinc       620 Oct 13 03:52 runtime_log
[2025-10-13 03:52:42] -rw------- 1 boinc boinc   1116160 Oct 13 03:52 result.tar.gz
[2025-10-13 03:52:42] -rw-r--r-- 1 boinc boinc      8797 Oct 13 03:52 runtime_log.err
[2025-10-13 03:52:42] -rw------- 1 boinc boinc       663 Oct 13 03:52 kfYLDmCR8R8n9Rq4apOajLDm4fhM0noT9bVof3QYDmEfTMDmxezLmn.diag
[2025-10-13 03:52:42] -rw-r--r-- 1 boinc boinc      6931 Oct 13 03:52 stderr.txt
[2025-10-13 03:52:42] HITS file was successfully produced:
[2025-10-13 03:52:42] -rw------- 1 boinc boinc 194995465 Oct 13 03:51 shared/HITS.pool.root.1
[2025-10-13 03:52:42]  *** Contents of shared directory: ***
[2025-10-13 03:52:42] total 406732
[2025-10-13 03:52:42] -rw-r--r-- 2 boinc boinc 219778360 Oct 13 02:15 ATLAS.root_0
[2025-10-13 03:52:42] -rw-r--r-- 2 boinc boinc    569672 Oct 13 02:15 input.tar.gz
[2025-10-13 03:52:42] -rw-r--r-- 2 boinc boinc     15120 Oct 13 02:15 start_atlas.sh
[2025-10-13 03:52:42] -rw------- 1 boinc boinc 194995465 Oct 13 03:51 HITS.pool.root.1
[2025-10-13 03:52:42] -rw------- 1 boinc boinc   1116160 Oct 13 03:52 result.tar.gz
03:52:43 (3045574): run_atlas exited; CPU time 16664.181007
03:52:43 (3045574): called boinc_finish(0)

</stderr_txt>
]]>

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