Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:03:07 (2202412): wrapper (7.7.26015): starting
10:03:07 (2202412): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 10:03:07] Arguments: --nthreads 8
[2025-10-12 10:03:07] Threads: 8
[2025-10-12 10:03:07] Checking for CVMFS
[2025-10-12 10:03:08] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 10:03:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 10:03:08] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 10:03:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 10:03:09] 2.13.2.0 7534 77431 141924 151621 2 740 37636997 40960000 33236 16776704 0 465118935 99.774 265141005 44655 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 10:03:09] CVMFS is ok
[2025-10-12 10:03:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 10:03:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 10:03:09] Further information can be found at the LHC@home message board.
[2025-10-12 10:03:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 10:03:09] Checking for apptainer binary...
[2025-10-12 10:03:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 10:03:09] Running /usr/bin/apptainer --version
[2025-10-12 10:03:09] apptainer version 1.4.3-1.el9
[2025-10-12 10:03:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 10:03:10] c-208-39.aglt2.org
[2025-10-12 10:03:10] apptainer works
[2025-10-12 10:03:10] Set ATHENA_PROC_NUMBER=8
[2025-10-12 10:03:10] Set ATHENA_CORE_NUMBER=8
[2025-10-12 10:03:10] Starting ATLAS job with PandaID=6839821866
[2025-10-12 10:03:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 13:11:57]  *** The last 200 lines of the pilot log: ***
[2025-10-12 13:11:57] 2025-10-12 17:11:28,404 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 13:11:57] 2025-10-12 17:11:28,410 | INFO     | fitting pss+swap vs Time
[2025-10-12 13:11:57] 2025-10-12 17:11:28,410 | INFO     | sum of square deviations: 1838743283.0055296
[2025-10-12 13:11:57] 2025-10-12 17:11:28,411 | INFO     | sum of deviations: 78719550803.76245
[2025-10-12 13:11:57] 2025-10-12 17:11:28,411 | INFO     | mean x: 1760283540.1049724
[2025-10-12 13:11:57] 2025-10-12 17:11:28,411 | INFO     | mean y: 2381870.4861878455
[2025-10-12 13:11:57] 2025-10-12 17:11:28,411 | INFO     | -- intersect: -75358181425.66997
[2025-10-12 13:11:57] 2025-10-12 17:11:28,411 | INFO     | intersect: -75358181425.66997
[2025-10-12 13:11:57] 2025-10-12 17:11:28,411 | INFO     | chi2: 6.910343694047633
[2025-10-12 13:11:57] 2025-10-12 17:11:28,411 | INFO     | sum of square deviations: 1690541647.9488585
[2025-10-12 13:11:57] 2025-10-12 17:11:28,412 | INFO     | sum of deviations: 88370705409.69305
[2025-10-12 13:11:57] 2025-10-12 17:11:28,412 | INFO     | mean x: 1760283387.6079545
[2025-10-12 13:11:57] 2025-10-12 17:11:28,412 | INFO     | mean y: 2391523.647727273
[2025-10-12 13:11:57] 2025-10-12 17:11:28,412 | INFO     | -- intersect: -92013965998.58052
[2025-10-12 13:11:57] 2025-10-12 17:11:28,412 | INFO     | intersect: -92013965998.58052
[2025-10-12 13:11:57] 2025-10-12 17:11:28,412 | INFO     | chi2: 6.177587909067006
[2025-10-12 13:11:57] 2025-10-12 17:11:28,412 | INFO     | current chi2=6.177587909067006 (change=10.603753118847063 %)
[2025-10-12 13:11:57] 2025-10-12 17:11:28,412 | INFO     | right removable region: 175
[2025-10-12 13:11:57] 2025-10-12 17:11:28,425 | INFO     | sum of square deviations: 1690530057.9488585
[2025-10-12 13:11:57] 2025-10-12 17:11:28,426 | INFO     | sum of deviations: 19586058898.886356
[2025-10-12 13:11:57] 2025-10-12 17:11:28,426 | INFO     | mean x: 1760283692.6079545
[2025-10-12 13:11:57] 2025-10-12 17:11:28,426 | INFO     | mean y: 2442647.7954545454
[2025-10-12 13:11:57] 2025-10-12 17:11:28,426 | INFO     | -- intersect: -20391764435.395935
[2025-10-12 13:11:57] 2025-10-12 17:11:28,426 | INFO     | intersect: -20391764435.395935
[2025-10-12 13:11:57] 2025-10-12 17:11:28,426 | INFO     | chi2: 2.3381175876672105
[2025-10-12 13:11:57] 2025-10-12 17:11:28,426 | INFO     | current chi2=2.3381175876672105 (change=66.16495949859635 %)
[2025-10-12 13:11:57] 2025-10-12 17:11:28,426 | INFO     | sum of square deviations: 1550503032.8888888
[2025-10-12 13:11:57] 2025-10-12 17:11:28,427 | INFO     | sum of deviations: -11379746371.777779
[2025-10-12 13:11:57] 2025-10-12 17:11:28,427 | INFO     | mean x: 1760283845.1111112
[2025-10-12 13:11:57] 2025-10-12 17:11:28,427 | INFO     | mean y: 2476130.304093567
[2025-10-12 13:11:57] 2025-10-12 17:11:28,427 | INFO     | -- intersect: 12921885686.297976
[2025-10-12 13:11:57] 2025-10-12 17:11:28,427 | INFO     | intersect: 12921885686.297976
[2025-10-12 13:11:57] 2025-10-12 17:11:28,427 | INFO     | chi2: 0.9461559421646022
[2025-10-12 13:11:57] 2025-10-12 17:11:28,427 | INFO     | current chi2=0.9461559421646022 (change=59.533432058538935 %)
[2025-10-12 13:11:57] 2025-10-12 17:11:28,427 | INFO     | sum of square deviations: 1418429645.325305
[2025-10-12 13:11:57] 2025-10-12 17:11:28,428 | INFO     | sum of deviations: -20261188466.469887
[2025-10-12 13:11:57] 2025-10-12 17:11:28,428 | INFO     | mean x: 1760283997.6144578
[2025-10-12 13:11:57] 2025-10-12 17:11:28,428 | INFO     | mean y: 2486347.4457831327
[2025-10-12 13:11:57] 2025-10-12 17:11:28,428 | INFO     | -- intersect: 25146804183.52569
[2025-10-12 13:11:57] 2025-10-12 17:11:28,428 | INFO     | intersect: 25146804183.52569
[2025-10-12 13:11:57] 2025-10-12 17:11:28,428 | INFO     | chi2: 0.8284641855021919
[2025-10-12 13:11:57] 2025-10-12 17:11:28,428 | INFO     | current chi2=0.8284641855021919 (change=12.438938595381723 %)
[2025-10-12 13:11:57] 2025-10-12 17:11:28,428 | INFO     | left removable region: 30
[2025-10-12 13:11:57] 2025-10-12 17:11:28,429 | INFO     | sum of square deviations: 945340576.5103433
[2025-10-12 13:11:57] 2025-10-12 17:11:28,443 | INFO     | sum of deviations: -6167576895.489657
[2025-10-12 13:11:57] 2025-10-12 17:11:28,443 | INFO     | mean x: 1760284272.1310344
[2025-10-12 13:11:57] 2025-10-12 17:11:28,443 | INFO     | mean y: 2496513.1310344827
[2025-10-12 13:11:57] 2025-10-12 17:11:28,443 | INFO     | -- intersect: 11486916917.855309
[2025-10-12 13:11:57] 2025-10-12 17:11:28,444 | INFO     | intersect: 11486916917.855309
[2025-10-12 13:11:57] 2025-10-12 17:11:28,444 | INFO     | chi2: 0.007622221694576157
[2025-10-12 13:11:57] 2025-10-12 17:11:28,444 | INFO     | -- intersect: 11486916917.855309
[2025-10-12 13:11:57] 2025-10-12 17:11:28,444 | INFO     | current memory leak: -6.52 B/s (using 145 data points, chi2=0.01)
[2025-10-12 13:11:57] 2025-10-12 17:11:28,444 | INFO     | could have reported an average CPU frequency of 3680 MHz (10 samples)
[2025-10-12 13:11:57] 2025-10-12 17:11:28,444 | INFO     | ..............................
[2025-10-12 13:11:57] 2025-10-12 17:11:28,444 | INFO     | . Timing measurements:
[2025-10-12 13:11:57] 2025-10-12 17:11:28,444 | INFO     | . get job = 0 s
[2025-10-12 13:11:57] 2025-10-12 17:11:28,444 | INFO     | . initial setup = 7 s
[2025-10-12 13:11:57] 2025-10-12 17:11:28,444 | INFO     | . payload setup = 47 s
[2025-10-12 13:11:57] 2025-10-12 17:11:28,444 | INFO     | . stage-in = 0 s
[2025-10-12 13:11:57] 2025-10-12 17:11:28,445 | INFO     | . payload execution = 11026 s
[2025-10-12 13:11:57] 2025-10-12 17:11:28,445 | INFO     | . stage-out = 4 s
[2025-10-12 13:11:57] 2025-10-12 17:11:28,445 | INFO     | . log creation = 0 s
[2025-10-12 13:11:57] 2025-10-12 17:11:28,445 | INFO     | ..............................
[2025-10-12 13:11:57] 2025-10-12 17:11:29,038 | INFO     | 
[2025-10-12 13:11:57] 2025-10-12 17:11:29,038 | INFO     | job summary report
[2025-10-12 13:11:57] 2025-10-12 17:11:29,038 | INFO     | --------------------------------------------------
[2025-10-12 13:11:57] 2025-10-12 17:11:29,038 | INFO     | PanDA job id: 6839821866
[2025-10-12 13:11:57] 2025-10-12 17:11:29,038 | INFO     | task id: 46676269
[2025-10-12 13:11:57] 2025-10-12 17:11:29,038 | INFO     | errors: (none)
[2025-10-12 13:11:57] 2025-10-12 17:11:29,038 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 13:11:57] 2025-10-12 17:11:29,038 | INFO     | pilot state: finished 
[2025-10-12 13:11:57] 2025-10-12 17:11:29,038 | INFO     | transexitcode: 0
[2025-10-12 13:11:57] 2025-10-12 17:11:29,038 | INFO     | exeerrorcode: 0
[2025-10-12 13:11:57] 2025-10-12 17:11:29,038 | INFO     | exeerrordiag: 
[2025-10-12 13:11:57] 2025-10-12 17:11:29,038 | INFO     | exitcode: 0
[2025-10-12 13:11:57] 2025-10-12 17:11:29,038 | INFO     | exitmsg: OK
[2025-10-12 13:11:57] 2025-10-12 17:11:29,039 | INFO     | cpuconsumptiontime: 24558 s
[2025-10-12 13:11:57] 2025-10-12 17:11:29,039 | INFO     | nevents: 400
[2025-10-12 13:11:57] 2025-10-12 17:11:29,039 | INFO     | neventsw: 0
[2025-10-12 13:11:57] 2025-10-12 17:11:29,039 | INFO     | pid: 2228410
[2025-10-12 13:11:57] 2025-10-12 17:11:29,039 | INFO     | pgrp: 2228410
[2025-10-12 13:11:57] 2025-10-12 17:11:29,039 | INFO     | corecount: 8
[2025-10-12 13:11:57] 2025-10-12 17:11:29,039 | INFO     | event service: False
[2025-10-12 13:11:57] 2025-10-12 17:11:29,039 | INFO     | sizes: {0: 2348684, 1: 2348883, 12: 2348883, 23: 2348911, 34: 2348995, 35: 2349229, 45: 2349385, 11078: 2378620, 11079: 2378619, 11083: 2387729, 11122: 2387867}
[2025-10-12 13:11:57] 2025-10-12 17:11:29,039 | INFO     | --------------------------------------------------
[2025-10-12 13:11:57] 2025-10-12 17:11:29,039 | INFO     | 
[2025-10-12 13:11:57] 2025-10-12 17:11:29,039 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-10-12 13:11:57] 2025-10-12 17:11:29,112 | INFO     | time since job start (11219s) is within the limit (172800.0s)
[2025-10-12 13:11:57] 2025-10-12 17:11:29,221 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 13:11:57] 2025-10-12 17:11:29,221 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 13:11:57] 2025-10-12 17:11:29,221 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 13:11:57] 2025-10-12 17:11:29,221 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 13:11:57] 2025-10-12 17:11:29,221 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 13:11:57] 2025-10-12 17:11:29,221 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 13:11:57] 2025-10-12 17:11:29,221 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 13:11:57] 2025-10-12 17:11:29,221 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 13:11:57] 2025-10-12 17:11:29,221 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 13:11:57] 2025-10-12 17:11:29,222 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 13:11:57] 2025-10-12 17:11:29,222 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 13:11:57] 2025-10-12 17:11:29,222 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 13:11:57] 2025-10-12 17:11:29,222 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 13:11:57] 2025-10-12 17:11:29,222 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 13:11:57] 2025-10-12 17:11:29,222 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 13:11:57] 2025-10-12 17:11:29,222 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 13:11:57] 2025-10-12 17:11:29,222 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 13:11:57] 2025-10-12 17:11:29,222 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 13:11:57] 2025-10-12 17:11:29,222 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 13:11:57] 2025-10-12 17:11:29,222 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 13:11:57] 2025-10-12 17:11:29,222 | INFO     | job 6839821866 has completed (purged errors)
[2025-10-12 13:11:57] 2025-10-12 17:11:29,222 | INFO     | overall cleanup function is called
[2025-10-12 13:11:57] 2025-10-12 17:11:30,242 | INFO     | --- collectZombieJob: --- 10, [2228410]
[2025-10-12 13:11:57] 2025-10-12 17:11:30,242 | INFO     | zombie collector waiting for pid 2228410
[2025-10-12 13:11:57] 2025-10-12 17:11:30,242 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 13:11:57] 2025-10-12 17:11:30,242 | INFO     | collected zombie processes
[2025-10-12 13:11:57] 2025-10-12 17:11:30,242 | INFO     | will attempt to kill all subprocesses of pid=2228410
[2025-10-12 13:11:57] 2025-10-12 17:11:33,973 | INFO     | process IDs to be killed: [2228410] (in reverse order)
[2025-10-12 13:11:57] 2025-10-12 17:11:34,197 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 13:11:57] 2025-10-12 17:11:34,197 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 13:11:57] 2025-10-12 17:11:34,230 | INFO     | PID=2210540 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 13:11:57] 2025-10-12 17:11:34,230 | INFO     | .. there are 30 such processes running
[2025-10-12 13:11:57] 2025-10-12 17:11:34,301 | INFO     | did not find any defunct processes belonging to 2228410
[2025-10-12 13:11:57] 2025-10-12 17:11:34,413 | INFO     | did not find any defunct processes belonging to 2228410
[2025-10-12 13:11:57] 2025-10-12 17:11:34,413 | INFO     | ready for new job
[2025-10-12 13:11:57] 2025-10-12 17:11:34,413 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 13:11:57] 2025-10-12 17:11:34,415 | INFO     | ***************************************
[2025-10-12 13:11:57] 2025-10-12 17:11:34,415 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 13:11:57] 2025-10-12 17:11:34,415 | INFO     | ***************************************
[2025-10-12 13:11:57] 2025-10-12 17:11:34,415 | INFO     | 
[2025-10-12 13:11:57] 2025-10-12 17:11:34,434 | INFO     | architecture information:
[2025-10-12 13:11:57] 2025-10-12 17:11:34,454 | INFO     | executing command: cat /etc/os-release
[2025-10-12 13:11:57] 2025-10-12 17:11:34,505 | INFO     | cat /etc/os-release:
[2025-10-12 13:11:57] NAME="CentOS Linux"
[2025-10-12 13:11:57] VERSION="7 (Core)"
[2025-10-12 13:11:57] ID="centos"
[2025-10-12 13:11:57] ID_LIKE="rhel fedora"
[2025-10-12 13:11:57] VERSION_ID="7"
[2025-10-12 13:11:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 13:11:57] ANSI_COLOR="0;31"
[2025-10-12 13:11:57] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 13:11:57] HOME_URL="https://www.centos.org/"
[2025-10-12 13:11:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 13:11:57] 
[2025-10-12 13:11:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 13:11:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 13:11:57] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 13:11:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 13:11:57] 
[2025-10-12 13:11:57] 2025-10-12 17:11:34,505 | INFO     | ***************************************
[2025-10-12 13:11:57] 2025-10-12 17:11:35,009 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-10-12 13:11:57] 2025-10-12 17:11:35,062 | INFO     | sufficient remaining disk space (170311811072 B)
[2025-10-12 13:11:57] 2025-10-12 17:11:35,063 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 13:11:57] 2025-10-12 17:11:35,066 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 13:11:57] 2025-10-12 17:11:35,066 | INFO     | update_server=False
[2025-10-12 13:11:57] 2025-10-12 17:11:35,066 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 13:11:57] 2025-10-12 17:11:35,066 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-10-12 13:11:57] 2025-10-12 17:11:35,066 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 13:11:57] 2025-10-12 17:11:35,066 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 13:11:57] 2025-10-12 17:11:35,066 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 13:11:57] 2025-10-12 17:11:35,108 | INFO     | all data control threads have been joined
[2025-10-12 13:11:57] 2025-10-12 17:11:35,676 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 13:11:57] 2025-10-12 17:11:35,994 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 13:11:57] 2025-10-12 17:11:35,994 | INFO     | aborting loop
[2025-10-12 13:11:57] 2025-10-12 17:11:36,071 | INFO     | [job] retrieve thread has finished
[2025-10-12 13:11:57] 2025-10-12 17:11:36,080 | INFO     | all payload control threads have been joined
[2025-10-12 13:11:57] 2025-10-12 17:11:36,102 | INFO     | [job] validate thread has finished
[2025-10-12 13:11:57] 2025-10-12 17:11:36,119 | INFO     | [data] control thread has finished
[2025-10-12 13:11:57] 2025-10-12 17:11:36,443 | INFO     | all job control threads have been joined
[2025-10-12 13:11:57] 2025-10-12 17:11:36,668 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 13:11:57] 2025-10-12 17:11:36,751 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 13:11:57] 2025-10-12 17:11:36,783 | INFO     | [payload] validate_post thread has finished
[2025-10-12 13:11:57] 2025-10-12 17:11:37,001 | INFO     | [data] copytool_in thread has finished
[2025-10-12 13:11:57] 2025-10-12 17:11:37,002 | INFO     | [job] job monitor thread has finished
[2025-10-12 13:11:57] 2025-10-12 17:11:37,074 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 13:11:57] 2025-10-12 17:11:37,074 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 13:11:57] 2025-10-12 17:11:37,086 | INFO     | [payload] control thread has finished
[2025-10-12 13:11:57] 2025-10-12 17:11:37,278 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 13:11:57] 2025-10-12 17:11:37,293 | INFO     | [payload] failed_post thread has finished
[2025-10-12 13:11:57] 2025-10-12 17:11:37,449 | INFO     | [job] control thread has finished
[2025-10-12 13:11:57] 2025-10-12 17:11:37,683 | INFO     | [data] copytool_out thread has finished
[2025-10-12 13:11:57] 2025-10-12 17:11:37,769 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 13:11:57] 2025-10-12 17:11:38,775 | INFO     | [job] queue monitor thread has finished
[2025-10-12 13:11:57] 2025-10-12 17:11:40,762 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 13:11:57] 2025-10-12 17:11:49,589 | INFO     | [monitor] cgroup control has ended
[2025-10-12 13:11:57] 2025-10-12 17:11:50,333 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139770081417024)>', '<ExcThread(monitor, started 139769375880960)>']
[2025-10-12 13:11:57] 2025-10-12 17:11:51,174 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 13:11:57] 2025-10-12 17:11:51,174 | INFO     | [monitor] control thread has ended
[2025-10-12 13:11:57] 2025-10-12 17:11:55,375 | INFO     | all workflow threads have been joined
[2025-10-12 13:11:57] 2025-10-12 17:11:55,375 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 13:11:57] 2025-10-12 17:11:55,375 | INFO     | traces error code: 0
[2025-10-12 13:11:57] 2025-10-12 17:11:55,375 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 13:11:57] 2025-10-12 17:11:56,158 [wrapper] ==== pilot stdout END ====
[2025-10-12 13:11:57] 2025-10-12 17:11:56,178 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 13:11:57] 2025-10-12 17:11:56,199 [wrapper] pilotpid: 2210540
[2025-10-12 13:11:57] 2025-10-12 17:11:56,253 [wrapper] Pilot exit status: 0
[2025-10-12 13:11:57] 2025-10-12 17:11:56,363 [wrapper] pandaids: 6839821866
[2025-10-12 13:11:57] 2025-10-12 17:11:56,551 [wrapper] cleanup supervisor_pilot 2832899 2210541
[2025-10-12 13:11:57] 2025-10-12 17:11:56,578 [wrapper] Test setup, not cleaning
[2025-10-12 13:11:57] 2025-10-12 17:11:56,606 [wrapper] apfmon messages muted
[2025-10-12 13:11:57] 2025-10-12 17:11:56,679 [wrapper] ==== wrapper stdout END ====
[2025-10-12 13:11:57] 2025-10-12 17:11:56,701 [wrapper] ==== wrapper stderr END ====
[2025-10-12 13:11:57]  *** Error codes and diagnostics ***
[2025-10-12 13:11:57]     "exeErrorCode": 0,
[2025-10-12 13:11:57]     "exeErrorDiag": "",
[2025-10-12 13:11:57]     "pilotErrorCode": 0,
[2025-10-12 13:11:57]     "pilotErrorDiag": "",
[2025-10-12 13:11:57]  *** Listing of results directory ***
[2025-10-12 13:11:57] total 405668
[2025-10-12 13:11:57] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 05:04 pilot3.tar.gz
[2025-10-12 13:11:57] -rwx------. 1 boincer umatlas     36292 Oct 12 05:18 runpilot2-wrapper.sh
[2025-10-12 13:11:57] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 05:18 queuedata.json
[2025-10-12 13:11:57] -rw-r--r--. 1 boincer umatlas       100 Oct 12 10:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 13:11:57] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 10:03 run_atlas
[2025-10-12 13:11:57] -rw-r--r--. 1 boincer umatlas       105 Oct 12 10:03 job.xml
[2025-10-12 13:11:57] -rw-r--r--. 2 boincer umatlas 220300032 Oct 12 10:03 EVNT.46676267._003568.pool.root.1
[2025-10-12 13:11:57] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 10:03 start_atlas.sh
[2025-10-12 13:11:57] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 10:03 shared
[2025-10-12 13:11:57] -rw-r--r--. 2 boincer umatlas    569682 Oct 12 10:03 input.tar.gz
[2025-10-12 13:11:57] -rw-r--r--. 1 boincer umatlas         0 Oct 12 10:03 boinc_lockfile
[2025-10-12 13:11:57] -rw-r--r--. 1 boincer umatlas      2549 Oct 12 10:03 pandaJob.out
[2025-10-12 13:11:57] -rw-------. 1 boincer umatlas    975528 Oct 12 10:04 agis_schedconf.cvmfs.json
[2025-10-12 13:11:57] drwx------. 5 boincer umatlas      4096 Oct 12 10:04 pilot3
[2025-10-12 13:11:57] -rw-------. 1 boincer umatlas 187515422 Oct 12 13:09 HITS.46676269._075187.pool.root.1
[2025-10-12 13:11:57] -rw-r--r--. 1 boincer umatlas       531 Oct 12 13:09 boinc_task_state.xml
[2025-10-12 13:11:57] -rw-------. 1 boincer umatlas      1049 Oct 12 13:10 memory_monitor_summary.json
[2025-10-12 13:11:57] -rw-------. 1 boincer umatlas   1560580 Oct 12 13:10 agis_ddmendpoints.agis.ALL.json
[2025-10-12 13:11:57] -rw-------. 1 boincer umatlas    400554 Oct 12 13:10 log.46676269._075187.job.log.tgz.1
[2025-10-12 13:11:57] -rw-------. 1 boincer umatlas        95 Oct 12 13:11 pilot_heartbeat.json
[2025-10-12 13:11:57] -rw-------. 1 boincer umatlas      7808 Oct 12 13:11 heartbeat.json
[2025-10-12 13:11:57] -rw-r--r--. 1 boincer umatlas      7174 Oct 12 13:11 init_data.xml
[2025-10-12 13:11:57] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 13:11 boinc_mmap_file
[2025-10-12 13:11:57] -rw-r--r--. 1 boincer umatlas        28 Oct 12 13:11 wrapper_checkpoint.txt
[2025-10-12 13:11:57] -rw-------. 1 boincer umatlas      4553 Oct 12 13:11 pilotlog.txt
[2025-10-12 13:11:57] -rw-------. 1 boincer umatlas   1438888 Oct 12 13:11 log.46676269._075187.job.log.1
[2025-10-12 13:11:57] -rw-------. 1 boincer umatlas       357 Oct 12 13:11 output.list
[2025-10-12 13:11:57] -rw-r--r--. 1 boincer umatlas       620 Oct 12 13:11 runtime_log
[2025-10-12 13:11:57] -rw-------. 1 boincer umatlas   1863680 Oct 12 13:11 result.tar.gz
[2025-10-12 13:11:57] -rw-r--r--. 1 boincer umatlas      8704 Oct 12 13:11 runtime_log.err
[2025-10-12 13:11:57] -rw-------. 1 boincer umatlas       659 Oct 12 13:11 jPnMDmfO7R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmLKjNDmH5FQyn.diag
[2025-10-12 13:11:57] -rw-r--r--. 1 boincer umatlas     20854 Oct 12 13:11 stderr.txt
[2025-10-12 13:11:57] HITS file was successfully produced:
[2025-10-12 13:11:57] -rw-------. 1 boincer umatlas 187515422 Oct 12 13:09 shared/HITS.pool.root.1
[2025-10-12 13:11:57]  *** Contents of shared directory: ***
[2025-10-12 13:11:57] total 400664
[2025-10-12 13:11:57] -rw-r--r--. 2 boincer umatlas 220300032 Oct 12 10:03 ATLAS.root_0
[2025-10-12 13:11:57] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 10:03 start_atlas.sh
[2025-10-12 13:11:57] -rw-r--r--. 2 boincer umatlas    569682 Oct 12 10:03 input.tar.gz
[2025-10-12 13:11:57] -rw-------. 1 boincer umatlas 187515422 Oct 12 13:09 HITS.pool.root.1
[2025-10-12 13:11:57] -rw-------. 1 boincer umatlas   1863680 Oct 12 13:11 result.tar.gz
13:11:59 (2202412): run_atlas exited; CPU time 24876.948235
13:11:59 (2202412): called boinc_finish(0)

</stderr_txt>
]]>

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